NO07G04460, NO07G04460 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G04460 vs. NCBI_GenBank
Match: PKA64601.1 (23S rRNA (adenine2503-C2)-methyltransferase [Apostasia shenzhenica]) HSP 1 Score: 175.3 bits (443), Expect = 2.200e-40 Identity = 96/200 (48.00%), Postives = 129/200 (64.50%), Query Frame = 0 Query: 1 MGEPFDNYDNVMKALSILTEQRGKLLLGPNQITVSTVGLVPLIDRFVEESRCMLAVSLHATTDEIRSSFMPINRRYPLATSLLPSLHAHFPLPVLEEGRXXXXXXXXXXXXGPVALEYVMMEGVNDTEEDAERLAAMTEGMDCVVNLIEFNTHEGAVFLPSSKDKIQTFRSILKKHGRLSTLRESKGAEEMGACGQVGDL 201 MGEP N DNVMKA++IL +++G L P ++TVST GLVP I RF+ ES C LAVSL+ATTDE+R+ MPINRRY L LL +L E R V EYVM+ GVND+ EDA RL + G+ C +NLI FN H G++F+P+S++K+ FR++L + G + LR S+G ++M ACGQ+G+L Sbjct: 160 MGEPLQNIDNVMKAVAILIDEQG-LHFSPRKVTVSTSGLVPQIRRFLRESNCSLAVSLNATTDEVRNQIMPINRRYNLGL-LLETLRE-------EVDRKHKYI---------VLFEYVMLAGVNDSMEDARRLIELVRGIPCKINLISFNPHHGSIFMPTSEEKMIEFRNVLAEAGCIVFLRLSRGNDQMAACGQLGEL 341
BLAST of NO07G04460 vs. NCBI_GenBank
Match: PNW87105.1 (hypothetical protein CHLRE_02g109250v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 168.7 bits (426), Expect = 2.100e-38 Identity = 98/203 (48.28%), Postives = 123/203 (60.59%), Query Frame = 0 Query: 1 MGEPFDNYDNVMKALSILTEQRGKLLLGPNQITVSTVGLVPLIDRFVEESRCMLAVSLHATTDEIRSSFMPINRRYPLATSLLPSLHAHFPLPVLEEGRXXXXXXXXXXXXGPVALEYVMMEGVNDTEEDAERLAAMTEGMDCVVNLIEFNTHEGAVFLPSSKDKIQTFRSILKKHGRLSTLRESKGAEEMGACGQVGDLAMA 204 MGEP NYD VM A+ IL L L N+I VSTVGLVP + RF+ R LAVSLHATTDE+R +P NRRYPL LL +L FP G+ V +EYV++ GVNDT DAERL A+T + C+VNLI FN H+G F SS D ++ FR++ GR T+R SKG +EM ACGQ+GD+ ++ Sbjct: 281 MGEPLHNYDAVMSAIEILAT---GLELSRNKIIVSTVGLVPEMRRFIASGRAKLAVSLHATTDEVRDWIVPTNRRYPL-DQLLGALREAFPY-----GKRKGDDF--------VVIEYVLLAGVNDTLADAERLLALTSDIYCLVNLIVFNPHDGTQFKRSSDDDVRAFRAVFLAAGRPCTVRASKGDDEMAACGQLGDVNLS 466
BLAST of NO07G04460 vs. NCBI_GenBank
Match: XP_006844954.1 (uncharacterized protein LOC18434828 isoform X2 [Amborella trichopoda] >ERN06629.1 hypothetical protein AMTR_s00058p00171240 [Amborella trichopoda]) HSP 1 Score: 167.5 bits (423), Expect = 4.600e-38 Identity = 92/198 (46.46%), Postives = 128/198 (64.65%), Query Frame = 0 Query: 1 MGEPFDNYDNVMKALSILTEQRGKLLLGPNQITVSTVGLVPLIDRFVEESRCMLAVSLHATTDEIRSSFMPINRRYPLATSLLPSLHAHFPLPVLEEGRXXXXXXXXXXXXGPVALEYVMMEGVNDTEEDAERLAAMTEGMDCVVNLIEFNTHEGAVFLPSSKDKIQTFRSILKKHGRLSTLRESKGAEEMGACGQVG 199 MGEP N DNV+KA +I+ +++G L P ++TVST GLVP + RF++ES C LAVSL+ATTDE+R+ MPINR+Y LA LL +L +E R V EYVM+ GVND+ EDA+RLAA+ G+ C +NLI FN H G+ F P+S +++ FR+ L G + +R+S+G ++M ACGQ+G Sbjct: 218 MGEPLHNIDNVLKASAIMVDEQG-LYFSPRKVTVSTSGLVPQLKRFLQESSCALAVSLNATTDEVRNWIMPINRKYNLA-RLLDTLR--------DELRFKHNY--------KVLFEYVMLAGVNDSMEDAKRLAALVNGVPCKINLITFNPHSGSEFEPTSDEQMVEFRNTLASEGCIVFMRQSRGDDKMAACGQLG 397
BLAST of NO07G04460 vs. NCBI_GenBank
Match: XP_010533939.1 (PREDICTED: uncharacterized protein LOC104809600 isoform X2 [Tarenaya hassleriana]) HSP 1 Score: 167.5 bits (423), Expect = 4.600e-38 Identity = 94/200 (47.00%), Postives = 128/200 (64.00%), Query Frame = 0 Query: 1 MGEPFDNYDNVMKALSILTEQRGKLLLGPNQITVSTVGLVPLIDRFVEESRCMLAVSLHATTDEIRSSFMPINRRYPLATSLLPSLHAHFPLPVLEEGRXXXXXXXXXXXXGPVALEYVMMEGVNDTEEDAERLAAMTEGMDCVVNLIEFNTHEGAVFLPSSKDKIQTFRSILKKHGRLSTLRESKGAEEMGACGQVGDL 201 MGEPF N +NV++A +I+ + +G L P ++TVST GLVP + RF+ ES C LAVSL+ATTDE+R+ MPINR+Y LA LL +L EE R V EYVM+ GVND+ +DAERL + + C +NLI+FN H G+ F+P+++DKI FR+IL + G LR S+G ++M ACGQ+G L Sbjct: 255 MGEPFHNIENVIRAANIMVDDQG-LHFSPRKVTVSTSGLVPQLKRFLRESTCALAVSLNATTDEVRNWIMPINRKYKLAV-LLETLR--------EELRSKNNY--------KVLFEYVMLAGVNDSMDDAERLIELVRDIPCKINLIQFNPHSGSQFIPTAEDKIIKFRNILAQGGCTVFLRLSRGNDQMAACGQLGML 436
BLAST of NO07G04460 vs. NCBI_GenBank
Match: XP_020523297.1 (uncharacterized protein LOC18434828 isoform X1 [Amborella trichopoda]) HSP 1 Score: 167.5 bits (423), Expect = 4.600e-38 Identity = 92/198 (46.46%), Postives = 128/198 (64.65%), Query Frame = 0 Query: 1 MGEPFDNYDNVMKALSILTEQRGKLLLGPNQITVSTVGLVPLIDRFVEESRCMLAVSLHATTDEIRSSFMPINRRYPLATSLLPSLHAHFPLPVLEEGRXXXXXXXXXXXXGPVALEYVMMEGVNDTEEDAERLAAMTEGMDCVVNLIEFNTHEGAVFLPSSKDKIQTFRSILKKHGRLSTLRESKGAEEMGACGQVG 199 MGEP N DNV+KA +I+ +++G L P ++TVST GLVP + RF++ES C LAVSL+ATTDE+R+ MPINR+Y LA LL +L +E R V EYVM+ GVND+ EDA+RLAA+ G+ C +NLI FN H G+ F P+S +++ FR+ L G + +R+S+G ++M ACGQ+G Sbjct: 234 MGEPLHNIDNVLKASAIMVDEQG-LYFSPRKVTVSTSGLVPQLKRFLQESSCALAVSLNATTDEVRNWIMPINRKYNLA-RLLDTLR--------DELRFKHNY--------KVLFEYVMLAGVNDSMEDAKRLAALVNGVPCKINLITFNPHSGSEFEPTSDEQMVEFRNTLASEGCIVFMRQSRGDDKMAACGQLG 413
BLAST of NO07G04460 vs. NCBI_GenBank
Match: NP_564755.1 (Radical SAM superfamily protein [Arabidopsis thaliana] >AAK96886.1 Unknown protein [Arabidopsis thaliana] >AAM10038.1 unknown protein [Arabidopsis thaliana] >AEE33668.1 Radical SAM superfamily protein [Arabidopsis thaliana]) HSP 1 Score: 166.8 bits (421), Expect = 7.800e-38 Identity = 91/198 (45.96%), Postives = 125/198 (63.13%), Query Frame = 0 Query: 1 MGEPFDNYDNVMKALSILTEQRGKLLLGPNQITVSTVGLVPLIDRFVEESRCMLAVSLHATTDEIRSSFMPINRRYPLATSLLPSLHAHFPLPVLEEGRXXXXXXXXXXXXGPVALEYVMMEGVNDTEEDAERLAAMTEGMDCVVNLIEFNTHEGAVFLPSSKDKIQTFRSILKKHGRLSTLRESKGAEEMGACGQVG 199 MGEPF N DNV+KA +I+ ++ G L P ++TVST GLVP + RF+ ES C LAVSL+ATTDE+R+ MPINR+Y L SLL L L EG V EYVM+ GVND+ +DA RL + +G+ C +NLI+FN H G+ F+ + +DK+ FR++L + G +R S+G ++M ACGQ+G Sbjct: 255 MGEPFHNIDNVIKAANIMVDENG-LHFSPRKVTVSTSGLVPQLKRFLRESNCALAVSLNATTDEVRNWIMPINRKYKL--SLL--------LETLREGLSSRHKY-------KVLFEYVMLAGVNDSMDDARRLVELVQGIPCKINLIQFNPHSGSQFIQTEEDKMIKFRNVLAEGGCTVLMRFSRGNDQMAACGQLG 434
BLAST of NO07G04460 vs. NCBI_GenBank
Match: XP_002886632.1 (uncharacterized protein LOC9322698 [Arabidopsis lyrata subsp. lyrata] >EFH62891.1 radical SAM domain-containing protein [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 166.8 bits (421), Expect = 7.800e-38 Identity = 91/198 (45.96%), Postives = 125/198 (63.13%), Query Frame = 0 Query: 1 MGEPFDNYDNVMKALSILTEQRGKLLLGPNQITVSTVGLVPLIDRFVEESRCMLAVSLHATTDEIRSSFMPINRRYPLATSLLPSLHAHFPLPVLEEGRXXXXXXXXXXXXGPVALEYVMMEGVNDTEEDAERLAAMTEGMDCVVNLIEFNTHEGAVFLPSSKDKIQTFRSILKKHGRLSTLRESKGAEEMGACGQVG 199 MGEPF N DNV+KA +I+ ++ G L P ++TVST GLVP + RF+ ES C LAVSL+ATTDE+R+ MPINR+Y L SLL L L EG V EYVM+ GVND+ +DA RL + +G+ C +NLI+FN H G+ F+ + +DK+ FR++L + G +R S+G ++M ACGQ+G Sbjct: 255 MGEPFHNIDNVIKAANIMVDENG-LHFSPRKVTVSTSGLVPQLKRFLRESNCALAVSLNATTDEVRNWIMPINRKYKL--SLL--------LETLREGLSSKHKY-------KVLFEYVMLAGVNDSMDDARRLVELVQGIPCKINLIQFNPHSGSQFIQTEEDKMIKFRNVLAEGGCTVLMRFSRGNDQMAACGQLG 434
BLAST of NO07G04460 vs. NCBI_GenBank
Match: AAC24056.1 (Contains similarity to hypothetical 43.1 KD protein in NDK-GCPE intergenic region gb|493519 from E. coli sequence gb|U02965 [Arabidopsis thaliana]) HSP 1 Score: 166.8 bits (421), Expect = 7.800e-38 Identity = 91/198 (45.96%), Postives = 125/198 (63.13%), Query Frame = 0 Query: 1 MGEPFDNYDNVMKALSILTEQRGKLLLGPNQITVSTVGLVPLIDRFVEESRCMLAVSLHATTDEIRSSFMPINRRYPLATSLLPSLHAHFPLPVLEEGRXXXXXXXXXXXXGPVALEYVMMEGVNDTEEDAERLAAMTEGMDCVVNLIEFNTHEGAVFLPSSKDKIQTFRSILKKHGRLSTLRESKGAEEMGACGQVG 199 MGEPF N DNV+KA +I+ ++ G L P ++TVST GLVP + RF+ ES C LAVSL+ATTDE+R+ MPINR+Y L SLL L L EG V EYVM+ GVND+ +DA RL + +G+ C +NLI+FN H G+ F+ + +DK+ FR++L + G +R S+G ++M ACGQ+G Sbjct: 251 MGEPFHNIDNVIKAANIMVDENG-LHFSPRKVTVSTSGLVPQLKRFLRESNCALAVSLNATTDEVRNWIMPINRKYKL--SLL--------LETLREGLSSRHKY-------KVLFEYVMLAGVNDSMDDARRLVELVQGIPCKINLIQFNPHSGSQFIQTEEDKMIKFRNVLAEGGCTVLMRFSRGNDQMAACGQLG 430
BLAST of NO07G04460 vs. NCBI_GenBank
Match: OAP18277.1 (hypothetical protein AXX17_AT1G53310 [Arabidopsis thaliana]) HSP 1 Score: 166.8 bits (421), Expect = 7.800e-38 Identity = 91/198 (45.96%), Postives = 125/198 (63.13%), Query Frame = 0 Query: 1 MGEPFDNYDNVMKALSILTEQRGKLLLGPNQITVSTVGLVPLIDRFVEESRCMLAVSLHATTDEIRSSFMPINRRYPLATSLLPSLHAHFPLPVLEEGRXXXXXXXXXXXXGPVALEYVMMEGVNDTEEDAERLAAMTEGMDCVVNLIEFNTHEGAVFLPSSKDKIQTFRSILKKHGRLSTLRESKGAEEMGACGQVG 199 MGEPF N DNV+KA +I+ ++ G L P ++TVST GLVP + RF+ ES C LAVSL+ATTDE+R+ MPINR+Y L SLL L L EG V EYVM+ GVND+ +DA RL + +G+ C +NLI+FN H G+ F+ + +DK+ FR++L + G +R S+G ++M ACGQ+G Sbjct: 256 MGEPFHNIDNVIKAANIMVDENG-LHFSPRKVTVSTSGLVPQLKRFLRESNCALAVSLNATTDEVRNWIMPINRKYKL--SLL--------LETLREGLSSRHKY-------KVLFEYVMLAGVNDSMDDARRLVELVQGIPCKINLIQFNPHSGSQFIQTEEDKMIKFRNVLAEGGCTVLMRFSRGNDQMAACGQLG 435
BLAST of NO07G04460 vs. NCBI_GenBank
Match: XP_020584953.1 (uncharacterized protein LOC110027751 isoform X1 [Phalaenopsis equestris]) HSP 1 Score: 166.4 bits (420), Expect = 1.000e-37 Identity = 94/198 (47.47%), Postives = 127/198 (64.14%), Query Frame = 0 Query: 1 MGEPFDNYDNVMKALSILTEQRGKLLLGPNQITVSTVGLVPLIDRFVEESRCMLAVSLHATTDEIRSSFMPINRRYPLATSLLPSLHAHFPLPVLEEGRXXXXXXXXXXXXGPVALEYVMMEGVNDTEEDAERLAAMTEGMDCVVNLIEFNTHEGAVFLPSSKDKIQTFRSILKKHGRLSTLRESKGAEEMGACGQVG 199 MGEPF N DNV+KA +I+ +++G L P ++TVST GLVP + RF++ES C LAVSL+ATTDE+R+ MPINR+Y L+ LL +L EE R V EYVM+EGVND+ EDA RL + + C +NLI FN H G++F P+S DK+ FR++L + G + LR S+G + M ACGQ+G Sbjct: 215 MGEPFHNIDNVIKAAAIMVDEQG-LHFSPRKVTVSTSGLVPQLKRFLKESNCALAVSLNATTDEVRNWVMPINRKYNLSL-LLETLR--------EEIRFKHKY--------KVLFEYVMLEGVNDSIEDARRLVELVRDIPCKINLISFNPHCGSLFKPTSDDKMIEFRNVLAEAGCVVFLRLSRGDDRMAACGQLG 394 The following BLAST results are available for this feature:
BLAST of NO07G04460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G04460 ID=NO07G04460|Name=NO07G04460|organism=Nannochloropsis oceanica|type=gene|length=1132bpback to top protein sequence of NO07G04460.1 >NO07G04460.1-protein ID=NO07G04460.1-protein|Name=NO07G04460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=224bpback to top Synonyms
Publications
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