NO07G04450, NO07G04450 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G04450 vs. NCBI_GenBank
Match: CBN74666.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 93.6 bits (231), Expect = 8.800e-16 Identity = 44/75 (58.67%), Postives = 57/75 (76.00%), Query Frame = 0 Query: 161 ALDAATTLEDGLKLIDIKHAKDGTKKLVMQITSGPAKGKAVESVLIPMVRGPQQAPRYTLCVSSQSGCAMDCAFC 236 A+ T + GL+L D++ A DGT+KLV +TSG GK VE+V+IPM+RGPQ+ PRYT+CVSSQ GCAM+C FC Sbjct: 175 AVREVATADGGLELEDVQLAADGTRKLVSVLTSGEGAGKKVETVIIPMLRGPQREPRYTVCVSSQVGCAMNCQFC 249
BLAST of NO07G04450 vs. NCBI_GenBank
Match: PSC75760.1 (E3 ubiquitin-ligase synoviolin [Micractinium conductrix]) HSP 1 Score: 85.9 bits (211), Expect = 1.800e-13 Identity = 53/151 (35.10%), Postives = 83/151 (54.97%), Query Frame = 0 Query: 85 ERVSEAGGKLRLRGMSLADITILLTYLNIGPNPEVKSAAVFKWLYHRDLMVHHSIFEALSSPANTAACCLSRQLCLALDAATTLEDGLKLIDIKHAKDGTKKLVMQITSGPAKGKAVESVLIPMVRGPQQAPRYTLCVSSQSGCAMDCAFC 236 E +A G+L L+ ++L + +IG + ++ +++++Y+ + A+ N SR + L T++ GL+L I A DGT+K+V ++ +GPA G VE+VLIP+VR PR TLCVSSQ GCAM+C FC Sbjct: 626 ESYYDAEGRLVLKNLTLPQLEEWCG--SIGEDGPRRAMQIWRFMYYDRRWIRSFEDAAVEHTQNG----FSRAIRAKLAPLATVDGGLQLQSIHAAGDGTRKMVFRLANGPAAGGQVETVLIPVVREQGSKPRITLCVSSQVGCAMNCQFC 770
BLAST of NO07G04450 vs. NCBI_GenBank
Match: KXZ47632.1 (hypothetical protein GPECTOR_34g791 [Gonium pectorale]) HSP 1 Score: 81.6 bits (200), Expect = 3.500e-12 Identity = 52/149 (34.90%), Postives = 79/149 (53.02%), Query Frame = 0 Query: 89 EAGGKLRLRGMSLADITILLTYLNIGPNPEVKSAAVFKWLYHRDLMVH--HSIFEALSSPANTAACCLSRQLCLALDAATTLEDGLKLIDIKHAKDGTKKLVMQITSGPAKGKAVESVLIPMVRGPQQAPRYTLCVSSQSGCAMDCAFC 236 +A G+L L+ ++L ++ P P ++ +++W+Y S+ E L +A + R + TL+ GL L + A DGT+KLV +T GPA G ++E+VLIP+VR R T+CVSSQ GCAM+C FC Sbjct: 36 DAEGRLVLKALTLPELEAWCA-AEGEPAPANRALQLWRWMYADPPAGSWLRSLEETLGRQNGFSAKFIER-----VSPRVTLDGGLVLQQVVRASDGTRKLVFGLTGGPAAGGSIEAVLIPVVRRAGLRDRLTICVSSQVGCAMNCQFC 178
BLAST of NO07G04450 vs. NCBI_GenBank
Match: GAX81183.1 (hypothetical protein CEUSTIGMA_g8616.t1 [Chlamydomonas eustigma]) HSP 1 Score: 79.3 bits (194), Expect = 1.700e-11 Identity = 36/69 (52.17%), Postives = 51/69 (73.91%), Query Frame = 0 Query: 167 TLEDGLKLIDIKHAKDGTKKLVMQITSGPAKGKAVESVLIPMVRGPQQAPRYTLCVSSQSGCAMDCAFC 236 T+ GL+L ++ AKDGT+K+ ++T GPAKG +E+VLIP+VR Q R T+C+S+Q GCAM+C FC Sbjct: 88 TVSGGLELKEVVTAKDGTRKMAFKLTEGPAKGGVIETVLIPVVREAGQRCRITICLSTQVGCAMNCQFC 156
BLAST of NO07G04450 vs. NCBI_GenBank
Match: PNW83667.1 (hypothetical protein CHLRE_05g238500v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 77.0 bits (188), Expect = 8.600e-11 Identity = 40/75 (53.33%), Postives = 50/75 (66.67%), Query Frame = 0 Query: 167 TLEDGLKLIDIKHAKDGTKKLVMQITSGPAKGKAVESVLIPMVRG------PQQAPRYTLCVSSQSGCAMDCAFC 236 TL+ GL L ++ A DGT+KLV ++T G A G +E+VLIP R Q+ PRYTLCVSSQ GCAM+C FC Sbjct: 250 TLDGGLALQEVVPAADGTRKLVFRVTGGEAAGGRIETVLIPWYRDFDRRQQLQERPRYTLCVSSQVGCAMNCQFC 324
BLAST of NO07G04450 vs. NCBI_GenBank
Match: XP_013897205.1 (ribosomal RNA large subunit methyltransferase N [Monoraphidium neglectum] >KIY98185.1 ribosomal RNA large subunit methyltransferase N [Monoraphidium neglectum]) HSP 1 Score: 76.6 bits (187), Expect = 1.100e-10 Identity = 41/93 (44.09%), Postives = 53/93 (56.99%), Query Frame = 0 Query: 155 SRQLCLALDAATTLEDGLKLIDIKHAKDGTKKLVMQITSGPAKGKAVESVLIPMVRGPQQAPRYTLCVSSQS------------GCAMDCAFC 236 S + C TL+ G++L + AKDGT+KLV ++T G KG +VE+VLIP++R PR TLCVSSQ GCAM C FC Sbjct: 52 SEKFCEKFRQLATLDGGVRLTSVARAKDGTRKLVFELTEGEGKGGSVEAVLIPVMREAGSKPRITLCVSSQGKRRWQIKEEGAVGCAMACQFC 144
BLAST of NO07G04450 vs. NCBI_GenBank
Match: PNW86443.1 (hypothetical protein CHLRE_02g086550v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 75.5 bits (184), Expect = 2.500e-10 Identity = 37/69 (53.62%), Postives = 47/69 (68.12%), Query Frame = 0 Query: 167 TLEDGLKLIDIKHAKDGTKKLVMQITSGPAKGKAVESVLIPMVRGPQQAPRYTLCVSSQSGCAMDCAFC 236 +LE GLKL + A DGT+KLV + G A G ++E+VLIP+VR R T+CVSSQ GCAM+C FC Sbjct: 173 SLEGGLKLSQVVRASDGTRKLVFTLLGGEAAGGSIETVLIPVVRQQGLRDRLTICVSSQVGCAMNCQFC 241
BLAST of NO07G04450 vs. NCBI_GenBank
Match: WP_021813557.1 (23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN [Psychrobacter aquaticus] >ERL56226.1 Ribosomal RNA large subunit methyltransferase N [Psychrobacter aquaticus CMS 56]) HSP 1 Score: 74.3 bits (181), Expect = 5.600e-10 Identity = 54/159 (33.96%), Postives = 83/159 (52.20%), Query Frame = 0 Query: 77 PTTLLPSVERVSEAGGKLRLRGMSLADITILLTYLNIGPNPEVKSAAVFKWLYHRDLMVHHSIFEALSSPANTAACCLSRQLCLALDAATTLEDGLKLIDIKHAKDGTKKLVMQITSGPAKGKAVESVLIPMVRGPQQAPRYTLCVSSQSGCAMDCAFC 236 P + S++ V EA K L GM+ A +T + +IG P +S V KW+Y + + FE +++ + + LS C+ K+I ++++DGT+K V ++T G VE+VLIP + R TLCVSSQ GCA+DC+FC Sbjct: 12 PAKITDSIKLVDEAHAKTNLLGMTQAQLTDY--FKSIGEKP-FRSTQVIKWIYQHGV----TDFEQMTNLSKSLRDKLSLNACVVPP---------KVIHRQYSEDGTRKWVFEVTG----GSLVETVLIP-ADDSKVNGRKTLCVSSQVGCALDCSFC 149
BLAST of NO07G04450 vs. NCBI_GenBank
Match: XP_011401162.1 (Dual-specificity RNA methyltransferase RlmN [Auxenochlorella protothecoides] >KFM28150.1 Dual-specificity RNA methyltransferase RlmN [Auxenochlorella protothecoides]) HSP 1 Score: 74.3 bits (181), Expect = 5.600e-10 Identity = 47/144 (32.64%), Postives = 78/144 (54.17%), Query Frame = 0 Query: 92 GKLRLRGMSLADITILLTYLNIGPNPEVKSAAVFKWLYHRDLMVHHSIFEALSSPANTAACCLSRQLCLALDAATTLEDGLKLIDIKHAKDGTKKLVMQITSGPAKGKAVESVLIPMVRGPQQAPRYTLCVSSQSGCAMDCAFC 236 G+L L+ ++L ++ + +G P + +++ LYH ++ + + +P +A + R L +L G+++ + A DGT+KL ++T+GPA G VE VLIPM P PR T+C+SSQ GCA +C FC Sbjct: 23 GRLMLKNLTLEQLSDWVV-AALG-EPRSRGMQLWRALYHSWPLL-EDLRPTIGTPNGFSAAFVDR-----LTRVASLGGGMEVAGVSTAPDGTQKLACRLTTGPAAGMEVECVLIPM---PGSKPRMTVCISSQVGCAQNCQFC 155
BLAST of NO07G04450 vs. NCBI_GenBank
Match: GAX77170.1 (hypothetical protein CEUSTIGMA_g4615.t1 [Chlamydomonas eustigma]) HSP 1 Score: 74.3 bits (181), Expect = 5.600e-10 Identity = 48/145 (33.10%), Postives = 75/145 (51.72%), Query Frame = 0 Query: 92 GKLRLRGMSLADITILLTYLNIGPNPEVKSAAVFKWLYHRDLMVHHSIFEALSSPANTAACCLSRQLCLALDAATTLEDGLKLIDIKHAKDGTKKLVMQITSGPAKGK-AVESVLIPMVRGPQQAPRYTLCVSSQSGCAMDCAFC 236 G+L LR ++L ++ L +++G P ++ +F+WLY ++ + S A S+ + + +L GL L ++ A+DGTKKLV + G VE+VLIPM RYT C+S+Q GCAM+C FC Sbjct: 95 GRLMLRNLTLQELQEWL--ISVGERPN-RAEQLFRWLYGKNAWIRD------ISEAKDNGFAFSKVFKEKVITSASLSGGLTLQSVRTAQDGTKKLVFALNQGEGSAMGTVETVLIPMPNKNGINSRYTACLSTQVGCAMNCQFC 230 The following BLAST results are available for this feature:
BLAST of NO07G04450 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G04450 ID=NO07G04450|Name=NO07G04450|organism=Nannochloropsis oceanica|type=gene|length=708bpback to top protein sequence of NO07G04450.1 >NO07G04450.1-protein ID=NO07G04450.1-protein|Name=NO07G04450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=236bpback to top Synonyms
Publications
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