NO07G04430, NO07G04430 (gene) Nannochloropsis oceanica

Overview
NameNO07G04430
Unique NameNO07G04430
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1398
Alignment locationchr7:1244189..1245586 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:1244189..1245586 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO07G04430 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G04430.1NO07G04430.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G04430.1NO07G04430.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G04430 ID=NO07G04430|Name=NO07G04430|organism=Nannochloropsis oceanica|type=gene|length=1398bp
ATGATGTTCCGGTCCATGGACGTGGCCACTAATAATCTCACGgtaggtgg
caatctcgtagtatctggttgtgaaaatgcttgtggtcgactaaagatca
gaggcttcgacatgtattttgcaatattccacagaacaatagatgacttg
gtgtatacatgagtatgtgatccatctatccagacggtgggtttgaatca
cagccaggcagaatgcaaccggctgctgtccctcgaagGAGCGAGAGAAG
ACGCCGCAACAGTCTCAGGCGAGCAACAGTATAGCCGAGCGAAGCCGAGA
AGGGCAATTATTGATGACCACAGgtgcatcctatggcaggccttgtcact
cctccctccctccctccctctttcccttcttttcaccttgacaggtcact
acttctctctacgcaagctgtagatactctcggcacatacctatcgccct
tcctccctccctccctccttcctccaacccttacagGTGGTGTCCTCTTC
ATCCTCTTTCCTCCTTTCTCGGGCAGCAAGTCGAGAAGGCCGAACCCTTC
CAGCGGCAATGGACGGCATCCAAGgtaacgagggaaggagggagggaagg
agggagggaaggagggagggagggagcgaatgaagggaaaatacaatgca
atgcacaacaacacgcaacaaatacccacgcaatacgcaacataactcca
cggcaacaacaacaataactacacagCAACAGTCATTCACGTGCAGGCGG
TGATTTTAAATATCACATGCAATGGTTTACGTCCACAGGCGATGgtatgg
caaagttgtatatttatcgcgttataactgagagtgatggcacgcaacag
taaatcgcttaggccttgaatggctggaatagtcctcgataaatagttgc
gaccacttggtgctccgcggttacaaacaaacaaaccacaccaaacaaat
acaaacacgacaacactgcacgagaacacaatatcacaatgcacaacaac
acgatgtacgacacacggcaatacaccgtagcactgcacacgcaacgtaa
caacatatctacatggcaaaaacactaatactaacaaaaaaccaacaaca
taaccacaaaaaaacaaccgaataacacacacacacatcaatacaacaat
caaggcaggcggtggcgtgaaatttctcatgcagtgcaacatatattcgt
ccgctcacagGCGGGCGGTGTTTTGCAAGTTCATATGCGATGTTTTGCAA
GTTCACAGGCGGTGATTTGCAAGTTCACAGGAGGTGTTATGACAAAGCAT
TGACAGGAGGGCCCTACCATGTTGAACGGGATAGTGTGACACTCAATCGT
GTCATTGCCCTTAAGGATGACGCGCATGCAACAACAGTCAATCGCTAA
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protein sequence of NO07G04430.1

>NO07G04430.1-protein ID=NO07G04430.1-protein|Name=NO07G04430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=157bp
MMFRSMDVATNNLTEREKTPQQSQASNSIAERSREGQLLMTTGGVLFILF
PPFSGSKSRRPNPSSGNGRHPSNSHSRAGGDFKYHMQWFTSTGDGGRCFA
SSYAMFCKFTGGDLQVHRRCYDKALTGGPYHVERDSVTLNRVIALKDDAH
ATTVNR*
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Synonyms
Publications