NO07G04400, NO07G04400 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO07G04400 vs. NCBI_GenBank
Match: EWM20060.1 (hypothetical protein Naga_101993g1 [Nannochloropsis gaditana]) HSP 1 Score: 214.5 bits (545), Expect = 2.900e-52 Identity = 156/193 (80.83%), Postives = 158/193 (81.87%), Query Frame = 0
Query: 11 NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ----TEIKYV----QSKAAAEIAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 196
NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQ TEIKY+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX REVQLA+TQDYEPYQAALVDKRK RGGT G EEKEEEN
Sbjct: 71 NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMFWKAEVERFKREVQLAFTQDYEPYQAALVDKRKTRGGTSGSEEKEEEN 263
BLAST of NO07G04400 vs. NCBI_GenBank
Match: EWM20166.1 (hypothetical protein Naga_101373g3 [Nannochloropsis gaditana]) HSP 1 Score: 208.4 bits (529), Expect = 2.000e-50 Identity = 167/219 (76.26%), Postives = 172/219 (78.54%), Query Frame = 0
Query: 11 NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIKYVQSKAA----------------------------------AEIAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 196
NHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWAT FQGIGAV+GVAGATAVVVRTFDQTEIKYVQSKAA +++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +TQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct: 82 NHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVVGVAGATAVVVRTFDQTEIKYVQSKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDKRTMSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 300
BLAST of NO07G04400 vs. NCBI_GenBank
Match: EWM20146.1 (hypothetical protein Naga_101508g1 [Nannochloropsis gaditana]) HSP 1 Score: 184.5 bits (467), Expect = 3.200e-43 Identity = 129/155 (83.23%), Postives = 132/155 (85.16%), Query Frame = 0
Query: 41 GKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIKYVQSKAAAEIAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 196
GKGRVLRGGF STAHTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTEIKY++SKAAAEIAQ XXXXXXXXXXXXXXXXXXXXXXXX REVQLAYTQDYEPYQAAL+DKRKKRGGTGGLEEKEEEN
Sbjct: 7 GKGRVLRGGFYSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEIKYIESKAAAEIAQ-------XXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALMDKRKKRGGTGGLEEKEEEN 154
BLAST of NO07G04400 vs. NCBI_GenBank
Match: EWM20082.1 (hypothetical protein Naga_101888g1 [Nannochloropsis gaditana]) HSP 1 Score: 174.9 bits (442), Expect = 2.500e-40 Identity = 139/196 (70.92%), Postives = 141/196 (71.94%), Query Frame = 0
Query: 22 RFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ----TEIKYVQSKAAAEIAQ------------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 196
RF + RRG KGRVLRGGFSSTAHTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQ TEIKYVQSKAAAEIAQ XXXXXXXXXXXXXXXXXXXXXXXXXXX REVQLAYTQDYEPYQAAL+DKRKKRGGTGGLEEKEEEN
Sbjct: 50 RFATNLWSSMRRGR------KGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALMDKRKKRGGTGGLEEKEEEN 239
BLAST of NO07G04400 vs. NCBI_GenBank
Match: EWM19988.1 (hypothetical protein Naga_102432g1 [Nannochloropsis gaditana]) HSP 1 Score: 174.5 bits (441), Expect = 3.300e-40 Identity = 142/155 (91.61%), Postives = 146/155 (94.19%), Query Frame = 0
Query: 41 GKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIKYVQSKAAAEIAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 196
GKGRVLRGGFSSTAHTGPGTSSGEELGKKWAT FQGIGAV+GVAGATAVVVRTFDQTEIKY++SKAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLA+TQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct: 7 GKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVVGVAGATAVVVRTFDQTEIKYIESKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 161
BLAST of NO07G04400 vs. NCBI_GenBank
Match: EWM19937.1 (hypothetical protein Naga_102907g1 [Nannochloropsis gaditana]) HSP 1 Score: 158.3 bits (399), Expect = 2.400e-35 Identity = 136/166 (81.93%), Postives = 141/166 (84.94%), Query Frame = 0
Query: 41 GKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIKYVQSKA-----------AAEIAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 196
GKGRVLRGGFSSTAHTGPGTS+GEELGKKWAT FQGIGAV+GVAGATAVVVRTFDQTEIKY++SKA XXXXXXXXXXXX X XXXXXXXXXXXXXXXXXXXXXXXXXXXXX VQLA+TQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct: 7 GKGRVLRGGFSSTAHTGPGTSNGEELGKKWATFFQGIGAVVGVAGATAVVVRTFDQTEIKYIESKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAXIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 172
BLAST of NO07G04400 vs. NCBI_GenBank
Match: EWM19982.1 (hypothetical protein Naga_102464g1 [Nannochloropsis gaditana]) HSP 1 Score: 144.4 bits (363), Expect = 3.600e-31 Identity = 132/153 (86.27%), Postives = 135/153 (88.24%), Query Frame = 0
Query: 61 SSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIKYVQSKAAAEIAQA------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 196
SSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIKY++SKAAAEIAQA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLA+TQDYEPYQAALVDKRKKRGGTGGLEEKEEEN
Sbjct: 2 SSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIKYIESKAAAEIAQAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAFTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 154
BLAST of NO07G04400 vs. NCBI_GenBank
Match: EWM22525.1 (hypothetical protein Naga_101794g1 [Nannochloropsis gaditana] >EWM22526.1 hypothetical protein Naga_101794g1 [Nannochloropsis gaditana]) HSP 1 Score: 126.3 bits (316), Expect = 1.000e-25 Identity = 67/76 (88.16%), Postives = 71/76 (93.42%), Query Frame = 0
Query: 42 KGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ----TEIKYVQSKAAAEIAQA 114
KGRVLRGGFSSTAHTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQ TEI++++SKAAAEIAQA
Sbjct: 22 KGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIRHIESKAAAEIAQA 97
BLAST of NO07G04400 vs. NCBI_GenBank
Match: EWM19984.1 (hypothetical protein Naga_102461g1 [Nannochloropsis gaditana]) HSP 1 Score: 80.1 bits (196), Expect = 8.400e-12 Identity = 39/42 (92.86%), Postives = 41/42 (97.62%), Query Frame = 0
Query: 1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGK 43
+LALLLAAIINHDHQGD MLRRFTAKAGAMARRGSTLPGPG+
Sbjct: 82 LLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGE 123
BLAST of NO07G04400 vs. NCBI_GenBank
Match: EWM19959.1 (hypothetical protein Naga_102684g1 [Nannochloropsis gaditana]) HSP 1 Score: 78.6 bits (192), Expect = 2.400e-11 Identity = 39/42 (92.86%), Postives = 40/42 (95.24%), Query Frame = 0
Query: 1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGK 43
MLALLLAAIINHDHQGD M RRFTAKAGAMARRGSTLPGPG+
Sbjct: 77 MLALLLAAIINHDHQGDKMPRRFTAKAGAMARRGSTLPGPGE 118 The following BLAST results are available for this feature:
BLAST of NO07G04400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G04400 ID=NO07G04400|Name=NO07G04400|organism=Nannochloropsis oceanica|type=gene|length=7990bpback to top protein sequence of NO07G04400.1 >NO07G04400.1-protein ID=NO07G04400.1-protein|Name=NO07G04400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=196bpback to top Synonyms
Publications
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