NO07G04390, NO07G04390 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO07G04390 vs. NCBI_GenBank
Match: EWM20019.1 (hypothetical protein Naga_102286g1 [Nannochloropsis gaditana]) HSP 1 Score: 204.5 bits (519), Expect = 2.900e-49 Identity = 147/178 (82.58%), Postives = 151/178 (84.83%), Query Frame = 0 Query: 1 MLASLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTE---MATEIKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDK 176 MLA LLAAIINHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTE + ++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KREVQLAYTQDYEPYQAAL+DK Sbjct: 1 MLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIKYVQSKAAAEIAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKREVQLAYTQDYEPYQAALMDK 178
BLAST of NO07G04390 vs. NCBI_GenBank
Match: EWM20082.1 (hypothetical protein Naga_101888g1 [Nannochloropsis gaditana]) HSP 1 Score: 199.1 bits (505), Expect = 1.200e-47 Identity = 151/196 (77.04%), Postives = 153/196 (78.06%), Query Frame = 0 Query: 22 RFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKY-------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 193 RF + RRG KGRVLRGGFSSTAHTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTEMATEIKY XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MSEVFWKAEVERFKREVQLAYTQDYEPYQAAL+DKRKKRGGTGGLEEKEEEN Sbjct: 50 RFATNLWSSMRRGR------KGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALMDKRKKRGGTGGLEEKEEEN 239
BLAST of NO07G04390 vs. NCBI_GenBank
Match: EWM20146.1 (hypothetical protein Naga_101508g1 [Nannochloropsis gaditana]) HSP 1 Score: 198.0 bits (502), Expect = 2.700e-47 Identity = 134/152 (88.16%), Postives = 135/152 (88.82%), Query Frame = 0 Query: 41 GKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 193 GKGRVLRGGF STAHTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQ TEIKY XXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAAL+DKRKKRGGTGGLEEKEEEN Sbjct: 7 GKGRVLRGGFYSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQ----TEIKYIESKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALMDKRKKRGGTGGLEEKEEEN 154
BLAST of NO07G04390 vs. NCBI_GenBank
Match: EWM20166.1 (hypothetical protein Naga_101373g3 [Nannochloropsis gaditana]) HSP 1 Score: 190.3 bits (482), Expect = 5.700e-45 Identity = 147/219 (67.12%), Postives = 152/219 (69.41%), Query Frame = 0 Query: 11 NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTE---MATEIKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSE----------------------------------VFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 193 NHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWAT FQGIGAV+GVAGATAVVVRTFDQTE + ++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX MSE +TQDYEPYQAALVDKRKKRGGT G EEKEEEN Sbjct: 82 NHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVVGVAGATAVVVRTFDQTEIKYVQSKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDKRTMSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 300
BLAST of NO07G04390 vs. NCBI_GenBank
Match: EWM19988.1 (hypothetical protein Naga_102432g1 [Nannochloropsis gaditana]) HSP 1 Score: 154.5 bits (389), Expect = 3.500e-34 Identity = 126/155 (81.29%), Postives = 131/155 (84.52%), Query Frame = 0 Query: 41 GKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTE---MATEIKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 193 GKGRVLRGGFSSTAHTGPGTSSGEELGKKWAT FQGIGAV+GVAGATAVVVRTFDQTE + ++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX REVQLA+TQDYEPYQAALVDKRKKRGGT G EEKEEEN Sbjct: 7 GKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVVGVAGATAVVVRTFDQTEIKYIESKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 161
BLAST of NO07G04390 vs. NCBI_GenBank
Match: EWM19937.1 (hypothetical protein Naga_102907g1 [Nannochloropsis gaditana]) HSP 1 Score: 143.3 bits (360), Expect = 8.000e-31 Identity = 124/170 (72.94%), Postives = 127/170 (74.71%), Query Frame = 0 Query: 41 GKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKY------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 193 GKGRVLRGGFSSTAHTGPGTS+GEELGKKWAT FQGIGAV+GVAGATAVVVRTFDQ TEIKY XXXXXXXXXXXXXXXXX X XXXXXXXXXXXXXXX VQLA+TQDYEPYQAALVDKRKKRGGT G EEKEEEN Sbjct: 7 GKGRVLRGGFSSTAHTGPGTSNGEELGKKWATFFQGIGAVVGVAGATAVVVRTFDQ----TEIKYIESKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAXIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 172
BLAST of NO07G04390 vs. NCBI_GenBank
Match: EWM22525.1 (hypothetical protein Naga_101794g1 [Nannochloropsis gaditana] >EWM22526.1 hypothetical protein Naga_101794g1 [Nannochloropsis gaditana]) HSP 1 Score: 121.7 bits (304), Expect = 2.500e-24 Identity = 61/64 (95.31%), Postives = 63/64 (98.44%), Query Frame = 0 Query: 42 KGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKY 106 KGRVLRGGFSSTAHTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTEMATEI++ Sbjct: 22 KGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIRH 85
BLAST of NO07G04390 vs. NCBI_GenBank
Match: EWM19982.1 (hypothetical protein Naga_102464g1 [Nannochloropsis gaditana]) HSP 1 Score: 116.7 bits (291), Expect = 8.000e-23 Identity = 113/153 (73.86%), Postives = 115/153 (75.16%), Query Frame = 0 Query: 61 SSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEM-------ATEI--------------KYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 193 SSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTE+ A EI XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX REVQLA+TQDYEPYQAALVDKRKKRGGTGGLEEKEEEN Sbjct: 2 SSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIKYIESKAAAEIAQAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAFTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 154
BLAST of NO07G04390 vs. NCBI_GenBank
Match: EWM19984.1 (hypothetical protein Naga_102461g1 [Nannochloropsis gaditana]) HSP 1 Score: 78.6 bits (192), Expect = 2.400e-11 Identity = 38/42 (90.48%), Postives = 40/42 (95.24%), Query Frame = 0 Query: 1 MLASLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGK 43 +LA LLAAIINHDHQGD MLRRFTAKAGAMARRGSTLPGPG+ Sbjct: 82 LLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGE 123
BLAST of NO07G04390 vs. NCBI_GenBank
Match: EWM19959.1 (hypothetical protein Naga_102684g1 [Nannochloropsis gaditana]) HSP 1 Score: 77.0 bits (188), Expect = 7.000e-11 Identity = 38/42 (90.48%), Postives = 39/42 (92.86%), Query Frame = 0 Query: 1 MLASLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGK 43 MLA LLAAIINHDHQGD M RRFTAKAGAMARRGSTLPGPG+ Sbjct: 77 MLALLLAAIINHDHQGDKMPRRFTAKAGAMARRGSTLPGPGE 118 The following BLAST results are available for this feature:
BLAST of NO07G04390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G04390 ID=NO07G04390|Name=NO07G04390|organism=Nannochloropsis oceanica|type=gene|length=791bpback to top protein sequence of NO07G04390.1 >NO07G04390.1-protein ID=NO07G04390.1-protein|Name=NO07G04390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=193bpback to top Synonyms
Publications
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