NO07G04390, NO07G04390 (gene) Nannochloropsis oceanica

Overview
NameNO07G04390
Unique NameNO07G04390
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length791
Alignment locationchr7:1221710..1222500 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:1221710..1222500 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
[Close]
BLAST of NO07G04390 vs. NCBI_GenBank
Match: EWM20057.1 (hypothetical protein Naga_102002g2 [Nannochloropsis gaditana])

HSP 1 Score: 278.5 bits (711), Expect = 1.600e-71
Identity = 152/192 (79.17%), Postives = 153/192 (79.69%), Query Frame = 0 
Query:    1 MLASLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 193
            MLA LLAAIINHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKY                                   MSEVFWKAEVERFKREVQLA+TQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct:    1 MLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKY------------------VQSKAAAEIARVEDKRAMSEVFWKAEVERFKREVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 174
[Close]
BLAST of NO07G04390 vs. NCBI_GenBank
Match: EWM20009.1 (hypothetical protein Naga_102330g1 [Nannochloropsis gaditana])

HSP 1 Score: 278.1 bits (710), Expect = 2.100e-71
Identity = 184/199 (92.46%), Postives = 184/199 (92.46%), Query Frame = 0 
Query:    1 MLASLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKY-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 193
            MLA LLAAIINHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTEMATEIKY         XXXXXXXXXXXXXXXXX  XXXXXXXXXXXXXXMSEVFWKAEVER KREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN
Sbjct:    1 MLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSRAAAEIXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXXXMSEVFWKAEVERIKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 199
[Close]
BLAST of NO07G04390 vs. NCBI_GenBank
Match: EWM20060.1 (hypothetical protein Naga_101993g1 [Nannochloropsis gaditana])

HSP 1 Score: 254.2 bits (648), Expect = 3.200e-64
Identity = 174/193 (90.16%), Postives = 176/193 (91.19%), Query Frame = 0 
Query:   11 NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKY-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 193
            NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTEMATEIKY           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  E+FWKAEVERFKREVQLA+TQDYEPYQAALVDKRK RGGT G EEKEEEN
Sbjct:   71 NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMFWKAEVERFKREVQLAFTQDYEPYQAALVDKRKTRGGTSGSEEKEEEN 263
[Close]
BLAST of NO07G04390 vs. NCBI_GenBank
Match: EWM20145.1 (hypothetical protein Naga_101508g3 [Nannochloropsis gaditana])

HSP 1 Score: 248.4 bits (633), Expect = 1.800e-62
Identity = 160/181 (88.40%), Postives = 161/181 (88.95%), Query Frame = 0 
Query:   12 HDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 193
            H   GDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGF STAHTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQ    TEIKY           XXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAAL+DKRKKRGGTGGLEEKEEEN
Sbjct:   30 HQPVGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFYSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQ----TEIKYIESKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALMDKRKKRGGTGGLEEKEEEN 206
[Close]
BLAST of NO07G04390 vs. NCBI_GenBank
Match: EWM20119.1 (hypothetical protein Naga_101718g2 [Nannochloropsis gaditana])

HSP 1 Score: 246.9 bits (629), Expect = 5.100e-62
Identity = 175/214 (81.78%), Postives = 176/214 (82.24%), Query Frame = 0 
Query:   11 NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKY--------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 193
            NHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGF STAHTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTEMATEIKY                                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLA+TQDYEPYQAALVDKRKKRGG  G EEKEEEN
Sbjct:   74 NHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFYSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYIESKAAAEIXXXXXXXXXXXXXXXXXEDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAFTQDYEPYQAALVDKRKKRGGISGSEEKEEEN 287
[Close]
BLAST of NO07G04390 vs. NCBI_GenBank
Match: EWM20114.1 (hypothetical protein Naga_101734g1 [Nannochloropsis gaditana])

HSP 1 Score: 245.0 bits (624), Expect = 1.900e-61
Identity = 135/182 (74.18%), Postives = 136/182 (74.73%), Query Frame = 0 
Query:   11 NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 193
            NHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMA EIKY                                          AEVERFKREVQLA+TQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct:   75 NHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMAPEIKY------------------------------------------AEVERFKREVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 214
[Close]
BLAST of NO07G04390 vs. NCBI_GenBank
Match: EWM20066.1 (hypothetical protein Naga_101980g1 [Nannochloropsis gaditana])

HSP 1 Score: 244.6 bits (623), Expect = 2.500e-61
Identity = 166/192 (86.46%), Postives = 168/192 (87.50%), Query Frame = 0 
Query:    1 MLASLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 193
            +LA LLAAIINHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTS+GEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ    TEIKY      XXXXXXXXXXXXXXXXXXXXXXXXXXXXX            FKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN
Sbjct:   82 LLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSNGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ----TEIKYVQSKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 269
[Close]
BLAST of NO07G04390 vs. NCBI_GenBank
Match: EWM19993.1 (hypothetical protein Naga_102410g1 [Nannochloropsis gaditana])

HSP 1 Score: 238.8 bits (608), Expect = 1.400e-59
Identity = 164/192 (85.42%), Postives = 165/192 (85.94%), Query Frame = 0 
Query:    1 MLASLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 193
            MLA LLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRG FSSTAHTGPGTS+GEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQ    TEIKY      XXXXXXXXXXXXXXXXXXXXXXXXXXXXX            FKREVQLAYTQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct:    1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGPFSSTAHTGPGTSNGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQ----TEIKYVQSKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKREVQLAYTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 188
[Close]
BLAST of NO07G04390 vs. NCBI_GenBank
Match: EWM20041.1 (hypothetical protein Naga_102106g1 [Nannochloropsis gaditana])

HSP 1 Score: 221.1 bits (562), Expect = 3.000e-54
Identity = 167/210 (79.52%), Postives = 169/210 (80.48%), Query Frame = 0 
Query:    1 MLASLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKY------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 193
            MLA LLAAIINHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGF STAHTGPGTSSGEELGKKWATIFQGIGAV+GVAGATAVVVRTFDQ    TEIKY                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              REVQLA+TQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct:    1 MLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFYSTAHTGPGTSSGEELGKKWATIFQGIGAVVGVAGATAVVVRTFDQ----TEIKYVQSKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 206
[Close]
BLAST of NO07G04390 vs. NCBI_GenBank
Match: EWM20054.1 (hypothetical protein Naga_102018g1 [Nannochloropsis gaditana])

HSP 1 Score: 211.5 bits (537), Expect = 2.400e-51
Identity = 160/200 (80.00%), Postives = 161/200 (80.50%), Query Frame = 0 
Query:   11 NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKY------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 193
            NHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ    TEIKY                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              REVQLA+TQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct:   72 NHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ----TEIKYVQSKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 267
The following BLAST results are available for this feature:
BLAST of NO07G04390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM20057.11.600e-7179.17hypothetical protein Naga_102002g2 [Nannochloropsi... [more]
EWM20009.12.100e-7192.46hypothetical protein Naga_102330g1 [Nannochloropsi... [more]
EWM20060.13.200e-6490.16hypothetical protein Naga_101993g1 [Nannochloropsi... [more]
EWM20145.11.800e-6288.40hypothetical protein Naga_101508g3 [Nannochloropsi... [more]
EWM20119.15.100e-6281.78hypothetical protein Naga_101718g2 [Nannochloropsi... [more]
EWM20114.11.900e-6174.18hypothetical protein Naga_101734g1 [Nannochloropsi... [more]
EWM20066.12.500e-6186.46hypothetical protein Naga_101980g1 [Nannochloropsi... [more]
EWM19993.11.400e-5985.42hypothetical protein Naga_102410g1 [Nannochloropsi... [more]
EWM20041.13.000e-5479.52hypothetical protein Naga_102106g1 [Nannochloropsi... [more]
EWM20054.12.400e-5180.00hypothetical protein Naga_102018g1 [Nannochloropsi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G04390.1NO07G04390.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G04390.1NO07G04390.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G04390 ID=NO07G04390|Name=NO07G04390|organism=Nannochloropsis oceanica|type=gene|length=791bp
ATGCTTGCCTCGCTGCTTGCTGCCATCATCAACCACGACCACCAGGGGGA
CAACATGCTTCGGCGCTTCACGGCGAAGGCTGGGGCCATGGCACGGAGAG
GGAGCACGCTTCCCGGGCCAGgtgaggtggcgtgtgtgatgcatttagga
agaactcgggcttgttgatggggtgggagtgcgcgttcagtgcacgcgac
cgcagtctggccgaggcatgttgatcccccctttgtctgcgtgtctgtgt
cgtttgcgttgcaatctttgttatgcggacaagggcccgcgtcaaggtgt
tcacgcacacgcacatccatacacacccaacagGAAAGGGACGCGTGCTG
CGGGGGGGTTTCTCCTCGACAGCCCACACGGGGCCGGGCACGAGCAGTGG
AGAGGAGCTCGGTAAGAAGTGGGCGACAATCTTCCAGGGCATTGGCGCGG
TGCTAGGGGTTGCTGGTGCTACCGCTGTGGTCGTGCGTACTTTCGACCAG
ACTGAGATGGCGACGGAGATCAAGTATGTCCAGAGCAAGGCGGCGGCGGA
GATCGCGCAGGCGAAAGCGGAGATCGCGCGTGTGGAGGACAAGGCGGCGG
CGGAGATCGCGCGTTTGGAGGACAAGCGGACAATGTCGGAAGTGTTTTGG
AAGGCGGAGGTGGAGCGGTTCAAGCGCGAGGTCCAACTGGCTTACACTCA
AGACTATGAGCCTTATCAGGCCGCGCTTGTGGACAAACGTAAAAAGAGGG
GAGGAACCGGCGGATTGGAGGAGAAGGAAGAGGAGAATTAG
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protein sequence of NO07G04390.1

>NO07G04390.1-protein ID=NO07G04390.1-protein|Name=NO07G04390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=193bp
MLASLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGF
SSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMA
TEIKYVQSKAAAEIAQAKAEIARVEDKAAAEIARLEDKRTMSEVFWKAEV
ERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN*
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Synonyms
Publications