NO07G04370, NO07G04370 (gene) Nannochloropsis oceanica

Overview
NameNO07G04370
Unique NameNO07G04370
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length791
Alignment locationchr7:1218243..1219033 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:1218243..1219033 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
[Close]
BLAST of NO07G04370 vs. NCBI_GenBank
Match: EWM20019.1 (hypothetical protein Naga_102286g1 [Nannochloropsis gaditana])

HSP 1 Score: 204.5 bits (519), Expect = 2.900e-49
Identity = 147/178 (82.58%), Postives = 151/178 (84.83%), Query Frame = 0 
Query:    1 MLASLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTE---MATEIKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDK 176
            MLA LLAAIINHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTE   + ++        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             KREVQLAYTQDYEPYQAAL+DK
Sbjct:    1 MLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIKYVQSKAAAEIAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKREVQLAYTQDYEPYQAALMDK 178
[Close]
BLAST of NO07G04370 vs. NCBI_GenBank
Match: EWM20082.1 (hypothetical protein Naga_101888g1 [Nannochloropsis gaditana])

HSP 1 Score: 199.1 bits (505), Expect = 1.200e-47
Identity = 151/196 (77.04%), Postives = 153/196 (78.06%), Query Frame = 0 
Query:   22 RFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKY-------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 193
            RF     +  RRG       KGRVLRGGFSSTAHTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTEMATEIKY                         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   MSEVFWKAEVERFKREVQLAYTQDYEPYQAAL+DKRKKRGGTGGLEEKEEEN
Sbjct:   50 RFATNLWSSMRRGR------KGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALMDKRKKRGGTGGLEEKEEEN 239
[Close]
BLAST of NO07G04370 vs. NCBI_GenBank
Match: EWM20146.1 (hypothetical protein Naga_101508g1 [Nannochloropsis gaditana])

HSP 1 Score: 198.0 bits (502), Expect = 2.700e-47
Identity = 134/152 (88.16%), Postives = 135/152 (88.82%), Query Frame = 0 
Query:   41 GKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 193
            GKGRVLRGGF STAHTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQ    TEIKY           XXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAAL+DKRKKRGGTGGLEEKEEEN
Sbjct:    7 GKGRVLRGGFYSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQ----TEIKYIESKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALMDKRKKRGGTGGLEEKEEEN 154
[Close]
BLAST of NO07G04370 vs. NCBI_GenBank
Match: EWM20166.1 (hypothetical protein Naga_101373g3 [Nannochloropsis gaditana])

HSP 1 Score: 190.3 bits (482), Expect = 5.700e-45
Identity = 147/219 (67.12%), Postives = 152/219 (69.41%), Query Frame = 0 
Query:   11 NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTE---MATEIKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSE----------------------------------VFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 193
            NHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWAT FQGIGAV+GVAGATAVVVRTFDQTE   + ++   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     MSE                                                   +TQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct:   82 NHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVVGVAGATAVVVRTFDQTEIKYVQSKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDKRTMSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 300
[Close]
BLAST of NO07G04370 vs. NCBI_GenBank
Match: EWM19988.1 (hypothetical protein Naga_102432g1 [Nannochloropsis gaditana])

HSP 1 Score: 154.5 bits (389), Expect = 3.500e-34
Identity = 126/155 (81.29%), Postives = 131/155 (84.52%), Query Frame = 0 
Query:   41 GKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTE---MATEIKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 193
            GKGRVLRGGFSSTAHTGPGTSSGEELGKKWAT FQGIGAV+GVAGATAVVVRTFDQTE   + ++   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              REVQLA+TQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct:    7 GKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVVGVAGATAVVVRTFDQTEIKYIESKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 161
[Close]
BLAST of NO07G04370 vs. NCBI_GenBank
Match: EWM19937.1 (hypothetical protein Naga_102907g1 [Nannochloropsis gaditana])

HSP 1 Score: 143.3 bits (360), Expect = 8.000e-31
Identity = 124/170 (72.94%), Postives = 127/170 (74.71%), Query Frame = 0 
Query:   41 GKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKY------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 193
            GKGRVLRGGFSSTAHTGPGTS+GEELGKKWAT FQGIGAV+GVAGATAVVVRTFDQ    TEIKY                  XXXXXXXXXXXXXXXXX X XXXXXXXXXXXXXXX                VQLA+TQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct:    7 GKGRVLRGGFSSTAHTGPGTSNGEELGKKWATFFQGIGAVVGVAGATAVVVRTFDQ----TEIKYIESKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAXIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 172
[Close]
BLAST of NO07G04370 vs. NCBI_GenBank
Match: EWM22525.1 (hypothetical protein Naga_101794g1 [Nannochloropsis gaditana] >EWM22526.1 hypothetical protein Naga_101794g1 [Nannochloropsis gaditana])

HSP 1 Score: 121.7 bits (304), Expect = 2.500e-24
Identity = 61/64 (95.31%), Postives = 63/64 (98.44%), Query Frame = 0 
Query:   42 KGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKY 106
            KGRVLRGGFSSTAHTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTEMATEI++
Sbjct:   22 KGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIRH 85
[Close]
BLAST of NO07G04370 vs. NCBI_GenBank
Match: EWM19982.1 (hypothetical protein Naga_102464g1 [Nannochloropsis gaditana])

HSP 1 Score: 116.7 bits (291), Expect = 8.000e-23
Identity = 113/153 (73.86%), Postives = 115/153 (75.16%), Query Frame = 0 
Query:   61 SSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEM-------ATEI--------------KYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 193
            SSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTE+       A EI                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              REVQLA+TQDYEPYQAALVDKRKKRGGTGGLEEKEEEN
Sbjct:    2 SSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIKYIESKAAAEIAQAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAFTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 154
[Close]
BLAST of NO07G04370 vs. NCBI_GenBank
Match: EWM19984.1 (hypothetical protein Naga_102461g1 [Nannochloropsis gaditana])

HSP 1 Score: 78.6 bits (192), Expect = 2.400e-11
Identity = 38/42 (90.48%), Postives = 40/42 (95.24%), Query Frame = 0 
Query:    1 MLASLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGK 43
            +LA LLAAIINHDHQGD MLRRFTAKAGAMARRGSTLPGPG+
Sbjct:   82 LLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGE 123
[Close]
BLAST of NO07G04370 vs. NCBI_GenBank
Match: EWM19959.1 (hypothetical protein Naga_102684g1 [Nannochloropsis gaditana])

HSP 1 Score: 77.0 bits (188), Expect = 7.000e-11
Identity = 38/42 (90.48%), Postives = 39/42 (92.86%), Query Frame = 0 
Query:    1 MLASLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGK 43
            MLA LLAAIINHDHQGD M RRFTAKAGAMARRGSTLPGPG+
Sbjct:   77 MLALLLAAIINHDHQGDKMPRRFTAKAGAMARRGSTLPGPGE 118
The following BLAST results are available for this feature:
BLAST of NO07G04370 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM20019.12.900e-4982.58hypothetical protein Naga_102286g1 [Nannochloropsi... [more]
EWM20082.11.200e-4777.04hypothetical protein Naga_101888g1 [Nannochloropsi... [more]
EWM20146.12.700e-4788.16hypothetical protein Naga_101508g1 [Nannochloropsi... [more]
EWM20166.15.700e-4567.12hypothetical protein Naga_101373g3 [Nannochloropsi... [more]
EWM19988.13.500e-3481.29hypothetical protein Naga_102432g1 [Nannochloropsi... [more]
EWM19937.18.000e-3172.94hypothetical protein Naga_102907g1 [Nannochloropsi... [more]
EWM22525.12.500e-2495.31hypothetical protein Naga_101794g1 [Nannochloropsi... [more]
EWM19982.18.000e-2373.86hypothetical protein Naga_102464g1 [Nannochloropsi... [more]
EWM19984.12.400e-1190.48hypothetical protein Naga_102461g1 [Nannochloropsi... [more]
EWM19959.17.000e-1190.48hypothetical protein Naga_102684g1 [Nannochloropsi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G04370.1NO07G04370.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G04370.1NO07G04370.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G04370 ID=NO07G04370|Name=NO07G04370|organism=Nannochloropsis oceanica|type=gene|length=791bp
ATGCTTGCCTCGCTGCTTGCTGCCATCATCAACCACGACCACCAGGGGGA
CAACATGCTTCGGCGCTTCACGGCGAAGGCTGGGGCCATGGCACGGAGAG
GGAGCACGCTTCCCGGGCCAGgtgaggtggcgtgtgtgatgcatttagga
agaactcgggcttgttgatggggtgggagtgcgcgttcagtgcacgcgac
cgcagtctggccgaggcatgttgatcccccctttgtctgcgtgtctgtgt
cgtttgcgttgcaatctttgttatgcggacaagggcccgcgtcaaggtgt
tcacgcacacgcacatccatacacacccaacagGAAAGGGACGCGTGCTG
CGGGGGGGTTTCTCCTCGACAGCCCACACGGGGCCGGGCACGAGCAGTGG
AGAGGAGCTCGGTAAGAAGTGGGCGACAATCTTCCAGGGCATTGGCGCGG
TGCTAGGGGTTGCTGGTGCTACCGCTGTGGTCGTGCGTACTTTCGACCAG
ACTGAGATGGCGACGGAGATCAAGTATGTCCAGAGCAAGGCGGCGGCGGA
GATCGCGCAGGCGAAAGCGGAGATCGCGCGTGTGGAGGACAAGGCGGCGG
CGGAGATCGCGCGTTTGGAGGACAAGCGGACAATGTCGGAAGTGTTTTGG
AAGGCGGAGGTGGAGCGGTTCAAGCGCGAGGTCCAACTGGCTTACACTCA
AGACTATGAGCCTTATCAGGCCGCGCTTGTGGACAAACGTAAAAAGAGGG
GAGGAACCGGCGGATTGGAGGAGAAGGAAGAGGAGAATTAG
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protein sequence of NO07G04370.1

>NO07G04370.1-protein ID=NO07G04370.1-protein|Name=NO07G04370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=193bp
MLASLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGF
SSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMA
TEIKYVQSKAAAEIAQAKAEIARVEDKAAAEIARLEDKRTMSEVFWKAEV
ERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN*
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Synonyms
Publications