NO07G04300, NO07G04300 (gene) Nannochloropsis oceanica

Overview
NameNO07G04300
Unique NameNO07G04300
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length758
Alignment locationchr7:1205879..1206636 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:1205879..1206636 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO07G04300 vs. NCBI_GenBank
Match: EWM20082.1 (hypothetical protein Naga_101888g1 [Nannochloropsis gaditana])

HSP 1 Score: 222.2 bits (565), Expect = 1.300e-54
Identity = 132/196 (67.35%), Postives = 134/196 (68.37%), Query Frame = 0
Query:   22 RFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIAQ------------------------------------AKAEIARVEDKRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 182
            RF     +  RRG       KGRVLRGGFSST HTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIAQ                                              KRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAAL+DKRKKRGGTGGLEEKEEEN
Sbjct:   50 RFATNLWSSMRRGR------KGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALMDKRKKRGGTGGLEEKEEEN 239          
BLAST of NO07G04300 vs. NCBI_GenBank
Match: EWM20054.1 (hypothetical protein Naga_102018g1 [Nannochloropsis gaditana])

HSP 1 Score: 218.0 bits (554), Expect = 2.400e-53
Identity = 130/200 (65.00%), Postives = 131/200 (65.50%), Query Frame = 0
Query:   11 NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAA-----------------------------AEIAQAKAEIARVEDKRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 182
            NHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSST HTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ    TEIKYVQSKAA                                                             REVQLA+TQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct:   72 NHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ----TEIKYVQSKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 267          
BLAST of NO07G04300 vs. NCBI_GenBank
Match: EWM20146.1 (hypothetical protein Naga_101508g1 [Nannochloropsis gaditana])

HSP 1 Score: 208.8 bits (530), Expect = 1.500e-50
Identity = 118/152 (77.63%), Postives = 121/152 (79.61%), Query Frame = 0
Query:   41 GKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIAQ-----------AKAEIARVEDKRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 182
            GKGRVLRGGF ST HTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQ    TEIKY++SKAAAEIAQ                        MSEVFWKAEVERFKREVQLAYTQDYEPYQAAL+DKRKKRGGTGGLEEKEEEN
Sbjct:    7 GKGRVLRGGFYSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQ----TEIKYIESKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALMDKRKKRGGTGGLEEKEEEN 154          
BLAST of NO07G04300 vs. NCBI_GenBank
Match: EWM20166.1 (hypothetical protein Naga_101373g3 [Nannochloropsis gaditana])

HSP 1 Score: 208.0 bits (528), Expect = 2.500e-50
Identity = 130/223 (58.30%), Postives = 132/223 (59.19%), Query Frame = 0
Query:   11 NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAA------------------AEIAQAKAEIARVEDKRTMSE----------------------------------VFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 182
            NHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSST HTGPGTSSGEELGKKWAT FQGIGAV+GVAGATAVVVRTFDQ    TEIKYVQSKAA                               EDKRTMSE                                                   +TQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct:   82 NHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVVGVAGATAVVVRTFDQ----TEIKYVQSKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDKRTMSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 300          
BLAST of NO07G04300 vs. NCBI_GenBank
Match: EWM19988.1 (hypothetical protein Naga_102432g1 [Nannochloropsis gaditana])

HSP 1 Score: 157.9 bits (398), Expect = 2.900e-35
Identity = 97/159 (61.01%), Postives = 101/159 (63.52%), Query Frame = 0
Query:   41 GKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAA------------------AEIAQAKAEIARVEDKRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 182
            GKGRVLRGGFSST HTGPGTSSGEELGKKWAT FQGIGAV+GVAGATAVVVRTFDQ    TEIKY++SKAA                                                  REVQLA+TQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct:    7 GKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVVGVAGATAVVVRTFDQ----TEIKYIESKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 161          
BLAST of NO07G04300 vs. NCBI_GenBank
Match: EWM22525.1 (hypothetical protein Naga_101794g1 [Nannochloropsis gaditana] >EWM22526.1 hypothetical protein Naga_101794g1 [Nannochloropsis gaditana])

HSP 1 Score: 152.9 bits (385), Expect = 9.500e-34
Identity = 80/86 (93.02%), Postives = 84/86 (97.67%), Query Frame = 0
Query:   42 KGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIAQAKAEIARVEDK 128
            KGRVLRGGFSST HTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTEMATEI++++SKAAAEIAQAKAEIARVEDK
Sbjct:   22 KGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIRHIESKAAAEIAQAKAEIARVEDK 107          
BLAST of NO07G04300 vs. NCBI_GenBank
Match: EWM19937.1 (hypothetical protein Naga_102907g1 [Nannochloropsis gaditana])

HSP 1 Score: 149.8 bits (377), Expect = 8.000e-33
Identity = 95/170 (55.88%), Postives = 100/170 (58.82%), Query Frame = 0
Query:   41 GKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKA-----------------------------AAEIAQAKAEIARVEDKRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 182
            GKGRVLRGGFSST HTGPGTS+GEELGKKWAT FQGIGAV+GVAGATAVVVRTFDQ    TEIKY++SKA                              A I                               VQLA+TQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct:    7 GKGRVLRGGFSSTAHTGPGTSNGEELGKKWATFFQGIGAVVGVAGATAVVVRTFDQ----TEIKYIESKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAXIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 172          
BLAST of NO07G04300 vs. NCBI_GenBank
Match: EWM19982.1 (hypothetical protein Naga_102464g1 [Nannochloropsis gaditana])

HSP 1 Score: 135.6 bits (340), Expect = 1.600e-28
Identity = 89/157 (56.69%), Postives = 92/157 (58.60%), Query Frame = 0
Query:   61 SSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIAQAK------------------------------------AEIARVEDKRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 182
            SSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ    TEIKY++SKAAAEIAQAK                                                             REVQLA+TQDYEPYQAALVDKRKKRGGTGGLEEKEEEN
Sbjct:    2 SSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ----TEIKYIESKAAAEIAQAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAFTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 154          
BLAST of NO07G04300 vs. NCBI_GenBank
Match: EWM19984.1 (hypothetical protein Naga_102461g1 [Nannochloropsis gaditana])

HSP 1 Score: 80.5 bits (197), Expect = 6.000e-12
Identity = 39/42 (92.86%), Postives = 41/42 (97.62%), Query Frame = 0
Query:    1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGK 43
            +LALLLAAIINHDHQGD MLRRFTAKAGAMARRGSTLPGPG+
Sbjct:   82 LLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGE 123          
BLAST of NO07G04300 vs. NCBI_GenBank
Match: EWM19959.1 (hypothetical protein Naga_102684g1 [Nannochloropsis gaditana])

HSP 1 Score: 79.0 bits (193), Expect = 1.700e-11
Identity = 39/42 (92.86%), Postives = 40/42 (95.24%), Query Frame = 0
Query:    1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGK 43
            MLALLLAAIINHDHQGD M RRFTAKAGAMARRGSTLPGPG+
Sbjct:   77 MLALLLAAIINHDHQGDKMPRRFTAKAGAMARRGSTLPGPGE 118          
The following BLAST results are available for this feature:
BLAST of NO07G04300 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM20082.11.300e-5467.35hypothetical protein Naga_101888g1 [Nannochloropsi... [more]
EWM20054.12.400e-5365.00hypothetical protein Naga_102018g1 [Nannochloropsi... [more]
EWM20146.11.500e-5077.63hypothetical protein Naga_101508g1 [Nannochloropsi... [more]
EWM20166.12.500e-5058.30hypothetical protein Naga_101373g3 [Nannochloropsi... [more]
EWM19988.12.900e-3561.01hypothetical protein Naga_102432g1 [Nannochloropsi... [more]
EWM22525.19.500e-3493.02hypothetical protein Naga_101794g1 [Nannochloropsi... [more]
EWM19937.18.000e-3355.88hypothetical protein Naga_102907g1 [Nannochloropsi... [more]
EWM19982.11.600e-2856.69hypothetical protein Naga_102464g1 [Nannochloropsi... [more]
EWM19984.16.000e-1292.86hypothetical protein Naga_102461g1 [Nannochloropsi... [more]
EWM19959.11.700e-1192.86hypothetical protein Naga_102684g1 [Nannochloropsi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G04300.1NO07G04300.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G04300.1NO07G04300.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G04300 ID=NO07G04300|Name=NO07G04300|organism=Nannochloropsis oceanica|type=gene|length=758bp
ATGCTTGCCTTGCTGCTTGCTGCCATCATCAACCACGACCACCAGGGGGA
CAACATGCTTCGGCGCTTCACGGCGAAGGCTGGGGCCATGGCACGGAGAG
GGAGCACGCTTCCCGGGCCAGgtgaggtggcgtgtgtgatgcatttagga
agaactcgggcttgttgatggggtgggagtgcgcgttcagtgcacgcgac
cgcagtctggccgaggcatgttgattccccctttgtctgcgtgtctgtgt
cgtttgcgttgcaatctttgttatgcggacaagggcccgcatcaaggtgt
tcacgcacacgcacatccatacacacccaacagGAAAGGGACGCGTGCTG
CGGGGGGGCTTCTCCTCGACAGTCCACACGGGGCCAGGCACGAGCAGTGG
AGAGGAGCTCGGTAAGAAGTGGGCGACAATCTTCCAAGGCATTGGCGCGG
TGCTAGGGGTTGCTGGTGCTACCGCTGTGGTCGTGCGTACTTTCGACCAG
ACTGAGATGGCGACGGAGATAAAGTATGTCCAGAGCAAGGCGGCGGCGGA
GATCGCGCAGGCGAAAGCGGAGATCGCGCGTGTGGAAGACAAGCGGACAA
TGTCGGAAGTGTTTTGGAAGGCGGAGGTGGAGCGGTTCAAGCGCGAGGTC
CAACTGGCTTACACTCAAGACTATGAGCCTTACCAGGCCGCGCTTGTGGA
CAAACGTAAAAAGAGGGGAGGAACCGGCGGATTGGAGGAGAAGGAAGAGG
AGAATTAG
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protein sequence of NO07G04300.1

>NO07G04300.1-protein ID=NO07G04300.1-protein|Name=NO07G04300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=182bp
MLALLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGF
SSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMA
TEIKYVQSKAAAEIAQAKAEIARVEDKRTMSEVFWKAEVERFKREVQLAY
TQDYEPYQAALVDKRKKRGGTGGLEEKEEEN*
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Synonyms
Publications