NO07G04300, NO07G04300 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO07G04300 vs. NCBI_GenBank
Match: EWM20082.1 (hypothetical protein Naga_101888g1 [Nannochloropsis gaditana]) HSP 1 Score: 222.2 bits (565), Expect = 1.300e-54 Identity = 132/196 (67.35%), Postives = 134/196 (68.37%), Query Frame = 0 Query: 22 RFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIAQ------------------------------------AKAEIARVEDKRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 182 RF + RRG KGRVLRGGFSST HTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIAQ KRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAAL+DKRKKRGGTGGLEEKEEEN Sbjct: 50 RFATNLWSSMRRGR------KGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALMDKRKKRGGTGGLEEKEEEN 239
BLAST of NO07G04300 vs. NCBI_GenBank
Match: EWM20054.1 (hypothetical protein Naga_102018g1 [Nannochloropsis gaditana]) HSP 1 Score: 218.0 bits (554), Expect = 2.400e-53 Identity = 130/200 (65.00%), Postives = 131/200 (65.50%), Query Frame = 0 Query: 11 NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAA-----------------------------AEIAQAKAEIARVEDKRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 182 NHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSST HTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ TEIKYVQSKAA REVQLA+TQDYEPYQAALVDKRKKRGGT G EEKEEEN Sbjct: 72 NHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ----TEIKYVQSKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 267
BLAST of NO07G04300 vs. NCBI_GenBank
Match: EWM20146.1 (hypothetical protein Naga_101508g1 [Nannochloropsis gaditana]) HSP 1 Score: 208.8 bits (530), Expect = 1.500e-50 Identity = 118/152 (77.63%), Postives = 121/152 (79.61%), Query Frame = 0 Query: 41 GKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIAQ-----------AKAEIARVEDKRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 182 GKGRVLRGGF ST HTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQ TEIKY++SKAAAEIAQ MSEVFWKAEVERFKREVQLAYTQDYEPYQAAL+DKRKKRGGTGGLEEKEEEN Sbjct: 7 GKGRVLRGGFYSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQ----TEIKYIESKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALMDKRKKRGGTGGLEEKEEEN 154
BLAST of NO07G04300 vs. NCBI_GenBank
Match: EWM20166.1 (hypothetical protein Naga_101373g3 [Nannochloropsis gaditana]) HSP 1 Score: 208.0 bits (528), Expect = 2.500e-50 Identity = 130/223 (58.30%), Postives = 132/223 (59.19%), Query Frame = 0 Query: 11 NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAA------------------AEIAQAKAEIARVEDKRTMSE----------------------------------VFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 182 NHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSST HTGPGTSSGEELGKKWAT FQGIGAV+GVAGATAVVVRTFDQ TEIKYVQSKAA EDKRTMSE +TQDYEPYQAALVDKRKKRGGT G EEKEEEN Sbjct: 82 NHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVVGVAGATAVVVRTFDQ----TEIKYVQSKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDKRTMSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 300
BLAST of NO07G04300 vs. NCBI_GenBank
Match: EWM19988.1 (hypothetical protein Naga_102432g1 [Nannochloropsis gaditana]) HSP 1 Score: 157.9 bits (398), Expect = 2.900e-35 Identity = 97/159 (61.01%), Postives = 101/159 (63.52%), Query Frame = 0 Query: 41 GKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAA------------------AEIAQAKAEIARVEDKRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 182 GKGRVLRGGFSST HTGPGTSSGEELGKKWAT FQGIGAV+GVAGATAVVVRTFDQ TEIKY++SKAA REVQLA+TQDYEPYQAALVDKRKKRGGT G EEKEEEN Sbjct: 7 GKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVVGVAGATAVVVRTFDQ----TEIKYIESKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 161
BLAST of NO07G04300 vs. NCBI_GenBank
Match: EWM22525.1 (hypothetical protein Naga_101794g1 [Nannochloropsis gaditana] >EWM22526.1 hypothetical protein Naga_101794g1 [Nannochloropsis gaditana]) HSP 1 Score: 152.9 bits (385), Expect = 9.500e-34 Identity = 80/86 (93.02%), Postives = 84/86 (97.67%), Query Frame = 0 Query: 42 KGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIAQAKAEIARVEDK 128 KGRVLRGGFSST HTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTEMATEI++++SKAAAEIAQAKAEIARVEDK Sbjct: 22 KGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIRHIESKAAAEIAQAKAEIARVEDK 107
BLAST of NO07G04300 vs. NCBI_GenBank
Match: EWM19937.1 (hypothetical protein Naga_102907g1 [Nannochloropsis gaditana]) HSP 1 Score: 149.8 bits (377), Expect = 8.000e-33 Identity = 95/170 (55.88%), Postives = 100/170 (58.82%), Query Frame = 0 Query: 41 GKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKA-----------------------------AAEIAQAKAEIARVEDKRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 182 GKGRVLRGGFSST HTGPGTS+GEELGKKWAT FQGIGAV+GVAGATAVVVRTFDQ TEIKY++SKA A I VQLA+TQDYEPYQAALVDKRKKRGGT G EEKEEEN Sbjct: 7 GKGRVLRGGFSSTAHTGPGTSNGEELGKKWATFFQGIGAVVGVAGATAVVVRTFDQ----TEIKYIESKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAXIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 172
BLAST of NO07G04300 vs. NCBI_GenBank
Match: EWM19982.1 (hypothetical protein Naga_102464g1 [Nannochloropsis gaditana]) HSP 1 Score: 135.6 bits (340), Expect = 1.600e-28 Identity = 89/157 (56.69%), Postives = 92/157 (58.60%), Query Frame = 0 Query: 61 SSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIAQAK------------------------------------AEIARVEDKRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 182 SSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ TEIKY++SKAAAEIAQAK REVQLA+TQDYEPYQAALVDKRKKRGGTGGLEEKEEEN Sbjct: 2 SSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ----TEIKYIESKAAAEIAQAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAFTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 154
BLAST of NO07G04300 vs. NCBI_GenBank
Match: EWM19984.1 (hypothetical protein Naga_102461g1 [Nannochloropsis gaditana]) HSP 1 Score: 80.5 bits (197), Expect = 6.000e-12 Identity = 39/42 (92.86%), Postives = 41/42 (97.62%), Query Frame = 0 Query: 1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGK 43 +LALLLAAIINHDHQGD MLRRFTAKAGAMARRGSTLPGPG+ Sbjct: 82 LLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGE 123
BLAST of NO07G04300 vs. NCBI_GenBank
Match: EWM19959.1 (hypothetical protein Naga_102684g1 [Nannochloropsis gaditana]) HSP 1 Score: 79.0 bits (193), Expect = 1.700e-11 Identity = 39/42 (92.86%), Postives = 40/42 (95.24%), Query Frame = 0 Query: 1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGK 43 MLALLLAAIINHDHQGD M RRFTAKAGAMARRGSTLPGPG+ Sbjct: 77 MLALLLAAIINHDHQGDKMPRRFTAKAGAMARRGSTLPGPGE 118 The following BLAST results are available for this feature:
BLAST of NO07G04300 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G04300 ID=NO07G04300|Name=NO07G04300|organism=Nannochloropsis oceanica|type=gene|length=758bpback to top protein sequence of NO07G04300.1 >NO07G04300.1-protein ID=NO07G04300.1-protein|Name=NO07G04300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=182bpback to top Synonyms
Publications
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