NO07G04300, NO07G04300 (gene) Nannochloropsis oceanica

Overview
NameNO07G04300
Unique NameNO07G04300
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length758
Alignment locationchr7:1205879..1206636 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:1205879..1206636 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
[Close]
BLAST of NO07G04300 vs. NCBI_GenBank
Match: EWM20057.1 (hypothetical protein Naga_102002g2 [Nannochloropsis gaditana])

HSP 1 Score: 313.9 bits (803), Expect = 3.200e-82
Identity = 168/181 (92.82%), Postives = 169/181 (93.37%), Query Frame = 0 
Query:    1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIAQAKAEIARVEDKRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 182
            MLALLLAAIINHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSST HTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAA       AEIARVEDKR MSEVFWKAEVERFKREVQLA+TQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct:    1 MLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAA-------AEIARVEDKRAMSEVFWKAEVERFKREVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 174
[Close]
BLAST of NO07G04300 vs. NCBI_GenBank
Match: EWM20009.1 (hypothetical protein Naga_102330g1 [Nannochloropsis gaditana])

HSP 1 Score: 291.6 bits (745), Expect = 1.700e-75
Identity = 163/199 (81.91%), Postives = 164/199 (82.41%), Query Frame = 0 
Query:    1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEI-------AQAKAEIARVED-----------KRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 182
            MLALLLAAIINHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSST HTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQS+AAAEI                 ED              MSEVFWKAEVER KREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN
Sbjct:    1 MLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSRAAAEIXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXXXMSEVFWKAEVERIKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 199
[Close]
BLAST of NO07G04300 vs. NCBI_GenBank
Match: EWM20119.1 (hypothetical protein Naga_101718g2 [Nannochloropsis gaditana])

HSP 1 Score: 260.4 bits (664), Expect = 4.200e-66
Identity = 149/214 (69.63%), Postives = 152/214 (71.03%), Query Frame = 0 
Query:   11 NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEI-------AQAKAEIARVEDK------------------------------------RTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 182
            NHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGF ST HTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTEMATEIKY++SKAAAEI                 EDK                                      MSEVFWKAEVERFKREVQLA+TQDYEPYQAALVDKRKKRGG  G EEKEEEN
Sbjct:   74 NHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFYSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYIESKAAAEIXXXXXXXXXXXXXXXXXEDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAFTQDYEPYQAALVDKRKKRGGISGSEEKEEEN 287
[Close]
BLAST of NO07G04300 vs. NCBI_GenBank
Match: EWM20145.1 (hypothetical protein Naga_101508g3 [Nannochloropsis gaditana])

HSP 1 Score: 259.6 bits (662), Expect = 7.200e-66
Identity = 144/181 (79.56%), Postives = 147/181 (81.22%), Query Frame = 0 
Query:   12 HDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIAQ-----------AKAEIARVEDKRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 182
            H   GDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGF ST HTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQ    TEIKY++SKAAAEIAQ                        MSEVFWKAEVERFKREVQLAYTQDYEPYQAAL+DKRKKRGGTGGLEEKEEEN
Sbjct:   30 HQPVGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFYSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQ----TEIKYIESKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALMDKRKKRGGTGGLEEKEEEN 206
[Close]
BLAST of NO07G04300 vs. NCBI_GenBank
Match: EWM20060.1 (hypothetical protein Naga_101993g1 [Nannochloropsis gaditana])

HSP 1 Score: 249.2 bits (635), Expect = 9.700e-63
Identity = 138/193 (71.50%), Postives = 141/193 (73.06%), Query Frame = 0 
Query:   11 NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYV----------------------QSKAAAEIAQAKAEIARVEDKRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 182
            NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSST HTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTEMATEIKY+                                               E+FWKAEVERFKREVQLA+TQDYEPYQAALVDKRK RGGT G EEKEEEN
Sbjct:   71 NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMFWKAEVERFKREVQLAFTQDYEPYQAALVDKRKTRGGTSGSEEKEEEN 263
[Close]
BLAST of NO07G04300 vs. NCBI_GenBank
Match: EWM20066.1 (hypothetical protein Naga_101980g1 [Nannochloropsis gaditana])

HSP 1 Score: 248.4 bits (633), Expect = 1.700e-62
Identity = 143/192 (74.48%), Postives = 145/192 (75.52%), Query Frame = 0 
Query:    1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAA-----------AEIAQAKAEIARVEDKRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 182
            +LALLLAAIINHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSST HTGPGTS+GEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ    TEIKYVQSKAA                                         FKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN
Sbjct:   82 LLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSNGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ----TEIKYVQSKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 269
[Close]
BLAST of NO07G04300 vs. NCBI_GenBank
Match: EWM20114.1 (hypothetical protein Naga_101734g1 [Nannochloropsis gaditana])

HSP 1 Score: 246.9 bits (629), Expect = 4.800e-62
Identity = 134/171 (78.36%), Postives = 135/171 (78.95%), Query Frame = 0 
Query:   11 NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIAQAKAEIARVEDKRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 182
            NHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSST HTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMA EIKY                               AEVERFKREVQLA+TQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct:   75 NHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMAPEIKY-------------------------------AEVERFKREVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 214
[Close]
BLAST of NO07G04300 vs. NCBI_GenBank
Match: EWM19993.1 (hypothetical protein Naga_102410g1 [Nannochloropsis gaditana])

HSP 1 Score: 242.7 bits (618), Expect = 9.100e-61
Identity = 141/192 (73.44%), Postives = 142/192 (73.96%), Query Frame = 0 
Query:    1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAA-----------AEIAQAKAEIARVEDKRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 182
            MLALLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRG FSST HTGPGTS+GEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQ    TEIKYVQSKAA                                         FKREVQLAYTQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct:    1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGPFSSTAHTGPGTSNGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQ----TEIKYVQSKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKREVQLAYTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 188
[Close]
BLAST of NO07G04300 vs. NCBI_GenBank
Match: EWM20041.1 (hypothetical protein Naga_102106g1 [Nannochloropsis gaditana])

HSP 1 Score: 227.3 bits (578), Expect = 4.000e-56
Identity = 137/210 (65.24%), Postives = 139/210 (66.19%), Query Frame = 0 
Query:    1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKA-----------------------------AAEIAQAKAEIARVEDKRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 182
            MLALLLAAIINHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGF ST HTGPGTSSGEELGKKWATIFQGIGAV+GVAGATAVVVRTFDQ    TEIKYVQSKA                                                              REVQLA+TQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct:    1 MLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFYSTAHTGPGTSSGEELGKKWATIFQGIGAVVGVAGATAVVVRTFDQ----TEIKYVQSKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 206
[Close]
BLAST of NO07G04300 vs. NCBI_GenBank
Match: EWM20019.1 (hypothetical protein Naga_102286g1 [Nannochloropsis gaditana])

HSP 1 Score: 224.6 bits (571), Expect = 2.600e-55
Identity = 132/182 (72.53%), Postives = 133/182 (73.08%), Query Frame = 0 
Query:    1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAAAEIAQA------------------KAEIARVEDKRTMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDK 165
            MLALLLAAIINHDHQGD MLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSST HTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ    TEIKYVQSKAAAEIAQA                                           KREVQLAYTQDYEPYQAAL+DK
Sbjct:    1 MLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ----TEIKYVQSKAAAEIAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKREVQLAYTQDYEPYQAALMDK 178
The following BLAST results are available for this feature:
BLAST of NO07G04300 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM20057.13.200e-8292.82hypothetical protein Naga_102002g2 [Nannochloropsi... [more]
EWM20009.11.700e-7581.91hypothetical protein Naga_102330g1 [Nannochloropsi... [more]
EWM20119.14.200e-6669.63hypothetical protein Naga_101718g2 [Nannochloropsi... [more]
EWM20145.17.200e-6679.56hypothetical protein Naga_101508g3 [Nannochloropsi... [more]
EWM20060.19.700e-6371.50hypothetical protein Naga_101993g1 [Nannochloropsi... [more]
EWM20066.11.700e-6274.48hypothetical protein Naga_101980g1 [Nannochloropsi... [more]
EWM20114.14.800e-6278.36hypothetical protein Naga_101734g1 [Nannochloropsi... [more]
EWM19993.19.100e-6173.44hypothetical protein Naga_102410g1 [Nannochloropsi... [more]
EWM20041.14.000e-5665.24hypothetical protein Naga_102106g1 [Nannochloropsi... [more]
EWM20019.12.600e-5572.53hypothetical protein Naga_102286g1 [Nannochloropsi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G04300.1NO07G04300.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G04300.1NO07G04300.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G04300 ID=NO07G04300|Name=NO07G04300|organism=Nannochloropsis oceanica|type=gene|length=758bp
ATGCTTGCCTTGCTGCTTGCTGCCATCATCAACCACGACCACCAGGGGGA
CAACATGCTTCGGCGCTTCACGGCGAAGGCTGGGGCCATGGCACGGAGAG
GGAGCACGCTTCCCGGGCCAGgtgaggtggcgtgtgtgatgcatttagga
agaactcgggcttgttgatggggtgggagtgcgcgttcagtgcacgcgac
cgcagtctggccgaggcatgttgattccccctttgtctgcgtgtctgtgt
cgtttgcgttgcaatctttgttatgcggacaagggcccgcatcaaggtgt
tcacgcacacgcacatccatacacacccaacagGAAAGGGACGCGTGCTG
CGGGGGGGCTTCTCCTCGACAGTCCACACGGGGCCAGGCACGAGCAGTGG
AGAGGAGCTCGGTAAGAAGTGGGCGACAATCTTCCAAGGCATTGGCGCGG
TGCTAGGGGTTGCTGGTGCTACCGCTGTGGTCGTGCGTACTTTCGACCAG
ACTGAGATGGCGACGGAGATAAAGTATGTCCAGAGCAAGGCGGCGGCGGA
GATCGCGCAGGCGAAAGCGGAGATCGCGCGTGTGGAAGACAAGCGGACAA
TGTCGGAAGTGTTTTGGAAGGCGGAGGTGGAGCGGTTCAAGCGCGAGGTC
CAACTGGCTTACACTCAAGACTATGAGCCTTACCAGGCCGCGCTTGTGGA
CAAACGTAAAAAGAGGGGAGGAACCGGCGGATTGGAGGAGAAGGAAGAGG
AGAATTAG
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protein sequence of NO07G04300.1

>NO07G04300.1-protein ID=NO07G04300.1-protein|Name=NO07G04300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=182bp
MLALLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGF
SSTVHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMA
TEIKYVQSKAAAEIAQAKAEIARVEDKRTMSEVFWKAEVERFKREVQLAY
TQDYEPYQAALVDKRKKRGGTGGLEEKEEEN*
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Synonyms
Publications