NO07G04250, NO07G04250 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO07G04250 vs. NCBI_GenBank
Match: EWM22002.1 (hypothetical protein Naga_100353g5 [Nannochloropsis gaditana]) HSP 1 Score: 109.8 bits (273), Expect = 1.100e-20 Identity = 72/190 (37.89%), Postives = 98/190 (51.58%), Query Frame = 0 Query: 1 MRRARSLFALGITFALAAAEPIEPTLILTSIKAIDVDRANKDKWSVKGYINDPDGDFVPAIGGLGLSTTLVNGATDIVNDLTFDANDCNELKNDEGVICKTTGTRVSIKRTNRVPKDATIEAQRNRNTTSASSYYRFTGVFRRQEF-DSTLASPLTAVFGIDGSGEIGDTTYKCKKREGARATKLLCTPG 190 MRR SL ALG+T AL + L L SIK + + NKDKWS+K ++ DP V IG GL+ TL++ A D ++ TF A DC KN +G CK G RVSI R ++ PK ++ S YY +G FRR + + + PLTA + G G + T C + G + K+ C PG Sbjct: 80 MRRGLSLLALGLTLALTTGQ----MLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSI-RASKPPKGV------GKSHNSTGGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVK-GTKTRKVTCVPG 257
BLAST of NO07G04250 vs. NCBI_GenBank
Match: EWM22004.1 (hypothetical protein Naga_100353g6 [Nannochloropsis gaditana]) HSP 1 Score: 109.8 bits (273), Expect = 1.100e-20 Identity = 72/190 (37.89%), Postives = 98/190 (51.58%), Query Frame = 0 Query: 1 MRRARSLFALGITFALAAAEPIEPTLILTSIKAIDVDRANKDKWSVKGYINDPDGDFVPAIGGLGLSTTLVNGATDIVNDLTFDANDCNELKNDEGVICKTTGTRVSIKRTNRVPKDATIEAQRNRNTTSASSYYRFTGVFRRQEF-DSTLASPLTAVFGIDGSGEIGDTTYKCKKREGARATKLLCTPG 190 MRR SL ALG+T AL + L L SIK + + NKDKWS+K ++ DP V IG GL+ TL++ A D ++ TF A DC KN +G CK G RVSI R ++ PK ++ S YY +G FRR + + + PLTA + G G + T C + G + K+ C PG Sbjct: 11 MRRGLSLLALGLTLALTTGQ----MLSLKSIKTFERTQMNKDKWSMKAHLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTATFAAGDCMVRKNSKGARCKMMGARVSI-RASKPPKGV------GKSHNSTGGYYSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVK-GTKTRKVTCVPG 188
BLAST of NO07G04250 vs. NCBI_GenBank
Match: XP_005852576.1 (hypothetical protein NGA_0721300 [Nannochloropsis gaditana CCMP526] >EKU23255.1 hypothetical protein NGA_0721300 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 106.7 bits (265), Expect = 9.600e-20 Identity = 70/190 (36.84%), Postives = 99/190 (52.11%), Query Frame = 0 Query: 1 MRRARSLFALGITFALAAAEPIEPTLILTSIKAIDVDRANKDKWSVKGYINDPDGDFVPAIGGLGLSTTLVNGATDIVNDLTFDANDCNELKNDEGVICKTTGTRVSIKRTNRVPKDATIEAQRNRNTTSASSYYRFTGVFRRQEF-DSTLASPLTAVFGIDGSGEIGDTTYKCKKREGARATKLLCTPG 190 MRR SL ALG+T AL + L L SIK + + NKDKWS+KG++ DP V IG GL+ TL++ A D ++ +F A DC K+ +G CK G RVSI R ++ PK ++ S Y+ +G FRR + + + PLTA + G G + T C + G + K+ C PG Sbjct: 1 MRRGLSLLALGLTLALTTGQ----MLSLKSIKTFERTQMNKDKWSMKGHLEDPTLAVVSGIGTNGLTVTLLDMAADTLDTASFAAGDCMVRKSSKGARCKMMGARVSI-RASKPPKGV------GKSHNSTGGYFSVSGSFRRVQLQEDPVDFPLTAELTVPGVGTLSQTLTGCSVK-GTKTRKVTCVPG 178
BLAST of NO07G04250 vs. NCBI_GenBank
Match: EWM20105.1 (hypothetical protein Naga_101776g1 [Nannochloropsis gaditana]) HSP 1 Score: 100.5 bits (249), Expect = 6.900e-18 Identity = 64/177 (36.16%), Postives = 98/177 (55.37%), Query Frame = 0 Query: 1 MRRARSLFALGITFALAAAEPIEPTLILTSIKAIDVDRANKDKWSVKGYINDPDGDFVPAIGGLGLSTTLVNGATDIVNDLTFDANDCNELKNDEGVICKTTGTRVSIKRTNRVPKDATIEAQRNRNTTSASSYYRFTGVFRRQEF-DSTLASPLTAVFGIDGSGEIGDTTYKCKKR 177 MRR SL ALG+T + A + L ++K + + +D+WS+KG +++P + VPAIG LGL+ L++ + D + F A +C L+N GV CK G RVSIKRT R PK A + ++ N+ S YY +G+FRR +F + +P+T + GS + C +R Sbjct: 37 MRRILSLLALGVTLVMTAGQ----EFTLKNVKVAERSKTARDQWSMKGNLDNPAMNVVPAIGQLGLTVNLLDVSLDPLASTAFAATNCKLLRNGRGVSCKKMGARVSIKRTRR-PKGAKV---KSSNSNSTGGYYGASGMFRRLQFLQDPVVTPVTVQVKV-GSTTLPAIVSTCSER 204
BLAST of NO07G04250 vs. NCBI_GenBank
Match: EWM20135.1 (hypothetical protein Naga_101626g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 97.4 bits (241), Expect = 5.800e-17 Identity = 67/191 (35.08%), Postives = 100/191 (52.36%), Query Frame = 0 Query: 1 MRRARSLFALGITFALAAAEPIEPTLILTSIKAIDVDRANKDKWSVKGYINDPDGDFVPAIGGLGLSTTLVNGATDIVNDLTFDANDCNELKNDEGVICKTTGTRVSIKRTNRVPKDATIEAQRNRNTTSASSYYRFTGVFRRQEF-DSTLASPLTAVFGIDGSGEIGDTTYKCKKR--EGARATKLLCTP 189 MR SL ALGIT + A + L +IK + +D+WS+KG +++P + VP IG GL+ L++ + + F A +C L+N GV CK+ G RV IKRT R PK A + ++ + S YY +G+FRR +F T+ +PLT + G+ + C +R R TK+ CTP Sbjct: 1 MRCILSLLALGITLVMTAGQ----EFTLKNIKVAGRFKTARDQWSMKGNLDNPTMNVVPVIGQSGLTVNLLDASLSPLASAAFAATNCKLLRNARGVSCKSMGARVYIKRTRR-PKAAKV---KSSSYNSTGGYYAASGMFRRLQFLQDTVVTPLTVQL-VVGTTTLPAIVSTCSERTKSAGRITKITCTP 182
BLAST of NO07G04250 vs. NCBI_GenBank
Match: XP_005854458.1 (glycosyl hydrolase [Nannochloropsis gaditana CCMP526] >EKU21904.1 glycosyl hydrolase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 85.9 bits (211), Expect = 1.800e-13 Identity = 59/153 (38.56%), Postives = 78/153 (50.98%), Query Frame = 0 Query: 46 VKGYINDPDGDFVPAIGGLGLSTTLVNGATDIVNDLTFDANDCNELKNDEGVICKTTGTRVSIKRTNRVPKDATIEAQRNRNTTSASSYYRFTGVFRRQEF-DSTLASPLTAVFGIDGSGEIGDTTYKC--KKREGARATKLLCTPGAAYPTP 196 +KG I+DP V AI GL+ L + ATD +N +TF A+DC + CK G RVSIK T+R PK T + ++ S YY TG FR F ++ + SPL A ++GS + DT C R+ R T C PG PTP Sbjct: 1 MKGSISDPSLTIVSAIRQTGLTVELQDAATDPLNTVTFAASDCRVPAHGRRAACKIRGARVSIK-TSRRPKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLAAALRVNGS-VLSDTLTSCYDLARKSGRNTITHCEPGPLVPTP 151
BLAST of NO07G04250 vs. NCBI_GenBank
Match: EWM25644.1 (hypothetical protein Naga_100037g5 [Nannochloropsis gaditana]) HSP 1 Score: 79.3 bits (194), Expect = 1.600e-11 Identity = 59/191 (30.89%), Postives = 90/191 (47.12%), Query Frame = 0 Query: 17 AAAEPIEP--TLIL----TSIKAIDVD--------RANKDKWSVKGYINDPDGDFVPAIGGLGLSTTLVNGATDIVNDLTFDANDCNELKNDEGVICKTTGTRVSIKRTNRVPKDATIEAQRNRNTTSASSYYRFTGVFRRQEF-DSTLASPLTAVFGIDGSGE----IGDTTYKC--KKREGARATKLLC 187 A PI+P T +L T I+ +D +A +D+W++ G+ NDP V IG G+ L + A ++ F C L N GV CKTTG R+ +K+T KD ++ RN +S ++Y+ GVFRR F + +PLT +F + T +C K + G + TK+ C Sbjct: 128 APVTPIDPFNTPVLVNNSTCIRVVDFHTDPSAKSFKAKRDRWTITGFFNDPAETAVVNIGQYGIIAVLQDAAKKALSSTFFTPPQCKALNNIRGVTCKTTGARLRLKKT----KDPSV-----RNKSSEGAFYKVKGVFRRLTFLQQPVQTPLTTIFAVQFPNTTTVFTTSATEQCTEKGKTGGKKTKIDC 309 The following BLAST results are available for this feature:
BLAST of NO07G04250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 17
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G04250 ID=NO07G04250|Name=NO07G04250|organism=Nannochloropsis oceanica|type=gene|length=2337bpback to top protein sequence of NO07G04250.1 >NO07G04250.1-protein ID=NO07G04250.1-protein|Name=NO07G04250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=224bpback to top Synonyms
Publications
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