NO07G04250, NO07G04250 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO07G04250 vs. NCBI_GenBank
Match: EWM20521.1 (hypothetical protein Naga_100335g8, partial [Nannochloropsis gaditana]) HSP 1 Score: 127.5 bits (319), Expect = 5.200e-26 Identity = 83/198 (41.92%), Postives = 104/198 (52.53%), Query Frame = 0 Query: 1 MRRARSLFALGITFALAAAEPIEPTLILTSIKAIDVDRANKDKWSVKGYINDPDGDFVPAIGGLGLSTTLVNGATDIVNDLTFDANDCNELKNDEGVICKTTGTRVSIKRTNRVPKDATIEAQRNRNTTSASSYYRFTGVFRRQEF-DSTLASPLTAVFGIDGSGEIGDTTYKC--KKREGARATKLLCTPGAAYPTP 196 MR SL ALGIT L L SI+A+D NKD W +KG INDP FVPAIG GL+ L + ATD +N + F A+DC + CK G RVSIKR+ R PK T + ++ S YY TG FR F ++ + SPLTA ++GS + DT C R+ AR+T C PG PTP Sbjct: 1 MRSPLSLLALGITLGSTLVTTAGQDLNLKSIRAVDRSVTNKDTWKMKGNINDPSLTFVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRAACKIRGARVSIKRSRR-PKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRVNGS-VLSDTLISCYDLARKSARSTISQCEPGPPVPTP 196
BLAST of NO07G04250 vs. NCBI_GenBank
Match: EWM26484.1 (Neuraminidase, partial [Nannochloropsis gaditana]) HSP 1 Score: 121.3 bits (303), Expect = 3.800e-24 Identity = 81/198 (40.91%), Postives = 101/198 (51.01%), Query Frame = 0 Query: 1 MRRARSLFALGITFALAAAEPIEPTLILTSIKAIDVDRANKDKWSVKGYINDPDGDFVPAIGGLGLSTTLVNGATDIVNDLTFDANDCNELKNDEGVICKTTGTRVSIKRTNRVPKDATIEAQRNRNTTSASSYYRFTGVFRRQEF-DSTLASPLTAVFGIDGSGEIGDTTYKC--KKREGARATKLLCTPGAAYPTP 196 MR A SL LG+TF L L SI+ +D NKD W +KG INDP VPAIG GL+ L + ATD +N + F A+DC + CK G RVSIK T+R PK T + ++ S YY TG FR F ++ + SPLTA I+GS + DT C R+ R T C PG PTP Sbjct: 1 MRSALSLLVLGVTFGSTLVPTAGQDLNLKSIRTVDRSVTNKDTWKMKGNINDPSLTIVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRATCKIRGARVSIK-TSRRPKVKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRINGS-VLSDTLTSCYDLARKSGRNTISHCEPGPPAPTP 196
BLAST of NO07G04250 vs. NCBI_GenBank
Match: EWM26485.1 (Neuraminidase, partial [Nannochloropsis gaditana]) HSP 1 Score: 121.3 bits (303), Expect = 3.800e-24 Identity = 81/198 (40.91%), Postives = 101/198 (51.01%), Query Frame = 0 Query: 1 MRRARSLFALGITFALAAAEPIEPTLILTSIKAIDVDRANKDKWSVKGYINDPDGDFVPAIGGLGLSTTLVNGATDIVNDLTFDANDCNELKNDEGVICKTTGTRVSIKRTNRVPKDATIEAQRNRNTTSASSYYRFTGVFRRQEF-DSTLASPLTAVFGIDGSGEIGDTTYKC--KKREGARATKLLCTPGAAYPTP 196 MR A SL LG+TF L L SI+ +D NKD W +KG INDP VPAIG GL+ L + ATD +N + F A+DC + CK G RVSIK T+R PK T + ++ S YY TG FR F ++ + SPLTA I+GS + DT C R+ R T C PG PTP Sbjct: 1 MRSALSLLVLGVTFGSTLVPTAGQDLNLKSIRTVDRSVTNKDTWKMKGNINDPSLTIVPAIGQTGLTVELQDAATDPLNTVAFAASDCRVPAHGRRATCKIRGARVSIK-TSRRPKVKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALRINGS-VLSDTLTSCYDLARKSGRNTISHCEPGPPAPTP 196
BLAST of NO07G04250 vs. NCBI_GenBank
Match: EWM27399.1 (hypothetical protein Naga_100212g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 117.9 bits (294), Expect = 4.200e-23 Identity = 81/198 (40.91%), Postives = 100/198 (50.51%), Query Frame = 0 Query: 1 MRRARSLFALGITFALAAAEPIEPTLILTSIKAIDVDRANKDKWSVKGYINDPDGDFVPAIGGLGLSTTLVNGATDIVNDLTFDANDCNELKNDEGVICKTTGTRVSIKRTNRVPKDATIEAQRNRNTTSASSYYRFTGVFRRQEF-DSTLASPLTAVFGIDGSGEIGDTTYKCKK--REGARATKLLCTPGAAYPTP 196 MR SL ALGIT L L SI+A+D NKD W +KG INDP V AIG GL+ L + ATD +N +TF A+DC + CK G RVSIK T+R PK T + ++ S YY TG FR F ++ + SPLTA +D S + DT C R+ R T C PG PTP Sbjct: 1 MRSTLSLLALGITLGSTLVTTAGQDLNLKSIRAVDRSVTNKDTWKMKGSINDPSLTIVSAIGQKGLTVELQDAATDPLNTVTFAASDCRVPAHGRRAACKIRGARVSIK-TSRRPKIKTPKTVHAKSYNSTGGYYSVTGTFRGLTFLENPVVSPLTAALTVDES-VLSDTLTLCYNLPRKNGRNTISHCEPGPPVPTP 196
BLAST of NO07G04250 vs. NCBI_GenBank
Match: EWM22005.1 (hypothetical protein Naga_100353g3 [Nannochloropsis gaditana]) HSP 1 Score: 117.1 bits (292), Expect = 7.100e-23 Identity = 77/195 (39.49%), Postives = 100/195 (51.28%), Query Frame = 0 Query: 1 MRRARSLFALGITFALAAAEPIEPTLILTSIKAIDVDRANKDKWSVKGYINDPDGDFVPAIGGLGLSTTLVNGATDIVNDLTFDANDCNELKNDEGVICKTTGTRVSIKRTNRVPKDATIEAQRNRNTTSASSYYRFTGVFRRQEF-DSTLASPLTAVFGIDGSGEIGDTTYKCKKREGARATKLLCTPGAAYPT 195 MRR SL ALG+T AL + L L SIK + R NKDKWS+KG + DP V IG GL+ TL++ A D ++ +F A DC KN +G CK G RVSI R ++ PK + + S YY +G FR + + + SPLTA + G G + T C R GA T+ C PG PT Sbjct: 68 MRRGLSLLALGLTLALTTGQ----MLSLKSIKTFERTRMNKDKWSMKGNLEDPTLAVVSGIGTSGLTVTLLDTADDTLDTASFAAGDCMVRKNSKGAKCKMMGARVSI-RASKPPKGVKV-----KTYNSTGGYYSVSGSFRGVQLQEDPVISPLTAELTVQGVGTLSQTLTDCSVR-GAGTTRTTCVPGPIIPT 251
BLAST of NO07G04250 vs. NCBI_GenBank
Match: EWM27397.1 (hypothetical protein Naga_101181g1 [Nannochloropsis gaditana]) HSP 1 Score: 116.7 bits (291), Expect = 9.300e-23 Identity = 78/198 (39.39%), Postives = 99/198 (50.00%), Query Frame = 0 Query: 1 MRRARSLFALGITFALAAAEPIEPTLILTSIKAIDVDRANKDKWSVKGYINDPDGDFVPAIGGLGLSTTLVNGATDIVNDLTFDANDCNELKNDEGVICKTTGTRVSIKRTNRVPKDATIEAQRNRNTTSASSYYRFTGVFRRQEF-DSTLASPLTAVFGIDGSGEIGDTTYKC--KKREGARATKLLCTPGAAYPTP 196 MR SL ALGIT +L L SI+A+D NKD W +KG INDP VP IG GL+ L + TD++N +TF A DC + + CK G RV IK T+R PK T + + S YY TG FRR F ++ + SPLTA ++ S + DT C R+ R C PG PTP Sbjct: 69 MRSTLSLLALGITLGSTLVTTTGQSLNLKSIRAVDRSVTNKDTWKMKGSINDPSLTIVPTIGQKGLTVELQDATTDLLNTVTFAARDCRVPAHGKRAACKIRGARVFIK-TSRRPKINTPKTVHAKRYNSTGGYYSVTGTFRRLTFLENPVVSPLTAALTVNES-VLSDTLTSCYDLPRKNGRNPITHCEPGPPVPTP 264
BLAST of NO07G04250 vs. NCBI_GenBank
Match: EWM30045.1 (hypothetical protein Naga_101600g1 [Nannochloropsis gaditana]) HSP 1 Score: 115.9 bits (289), Expect = 1.600e-22 Identity = 78/198 (39.39%), Postives = 113/198 (57.07%), Query Frame = 0 Query: 1 MRRARSLFALGITFALAAAEPIEPTLILTSIKAIDVDRANKDKWSVKGYINDPDGDFVPAIGGLGLSTTLVNGATDIVNDLTFDANDCNELKNDEGVICKTTGTRVSIKRTNRVPKDATIEAQRNRNTTSASSYYRFTGVFRRQEF-DSTLASPLTAVFGIDGSGEIGDTTYKCKKR-EGA-RATKLLCTPGAAYPTP 196 MRR SL ALG+T + A + L ++K + + +D+WS+KG +++P + VPAIG LGL+ L++ + D + F A +C L+N GV CK G RVSIKRT R PK A + ++ N+ S YY +G+FRR +F + +PLT V + GS + C +R +GA R TK+ CTPG A TP Sbjct: 1 MRRILSLLALGVTLVMTAGQ----EFTLKNVKVAERSKTARDQWSMKGNLDNPAMNVVPAIGQLGLTVNLLDVSLDPLASTAFAATNCKLLRNGRGVRCKKMGARVSIKRTRR-PKGAKV---KSSNSNSTGGYYGASGMFRRLQFLQDPVVTPLT-VQVVVGSTTLPAIVSTCSERTKGAGRITKITCTPGPAPVTP 189
BLAST of NO07G04250 vs. NCBI_GenBank
Match: EWM20775.1 (hypothetical protein Naga_100549g2 [Nannochloropsis gaditana]) HSP 1 Score: 113.2 bits (282), Expect = 1.000e-21 Identity = 78/198 (39.39%), Postives = 97/198 (48.99%), Query Frame = 0 Query: 1 MRRARSLFALGITFALAAAEPIEPTLILTSIKAIDVDRANKDKWSVKGYINDPDGDFVPAIGGLGLSTTLVNGATDIVNDLTFDANDCNELKNDEGVICKTTGTRVSIKRTNRVPKDATIEAQRNRNTTSASSYYRFTGVFRRQEF-DSTLASPLTAVFGIDGSGEIGDTTYKC--KKREGARATKLLCTPGAAYPTP 196 MR A S A+GITF + L L SI+A+D ANKD W +KG I+DP VP I GL L +G +D +N +TF A+DC N CK G RVSIK + R PK T + + S YYR TG R F + + SPLTA ++G + DT C R R T C PG PTP Sbjct: 1 MRSAFSFLAVGITFGSSLVTTAGQDLNLKSIRAVDRSVANKDTWKMKGKIDDPSMTIVPEIAQTGLIVELQDGGSDPLNTVTFAASDCRVPTNGRRATCKIRGARVSIKSSRR-PKLKTPKTVHAKTYNSTGGYYRVTGACRGLTFLEDLVLSPLTAKLTVNGD-VLSDTLTSCYDLPRMNGRNTITHCEPGPPVPTP 196
BLAST of NO07G04250 vs. NCBI_GenBank
Match: XP_005855033.1 (hypothetical protein NGA_0415500 [Nannochloropsis gaditana CCMP526] >EKU21331.1 hypothetical protein NGA_0415500 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 112.1 bits (279), Expect = 2.300e-21 Identity = 75/201 (37.31%), Postives = 103/201 (51.24%), Query Frame = 0 Query: 1 MRRARSLFALGITFALAAAEPIEPTLILTSIKAIDVDRANKDKWSVKGYINDPDGDFVPAIGGLGLSTTLVNGATDIVNDLTFDANDCNELKNDEGVICKTTGTRVSIKRTNRVPKDATIEAQRNRNTTSASSYYRFTGVFRRQEF-DSTLASPLTAVFGIDG-----SGEIGDTTYKCKKREGARATKLLCTPGAAYPTP 196 MRRA L ALGIT + A + + L ++K ID + +D+WS+KG ++DP VP IG GL+ L + A + F A+DC +N GV CKT G RVSIK + R PK A ++ N N S YY +G+FRR +F + PLT V + S + + K K R T++ CTPG TP Sbjct: 1 MRRAFFLLALGITLVMTAGQDL---FTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRR-PKGANVQ---NSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIK--GAGRTTRITCTPGPTPVTP 192
BLAST of NO07G04250 vs. NCBI_GenBank
Match: EWM30036.1 (hypothetical protein Naga_100179g1 [Nannochloropsis gaditana]) HSP 1 Score: 110.9 bits (276), Expect = 5.100e-21 Identity = 76/201 (37.81%), Postives = 104/201 (51.74%), Query Frame = 0 Query: 1 MRRARSLFALGITFALAAAEPIEPTLILTSIKAIDVDRANKDKWSVKGYINDPDGDFVPAIGGLGLSTTLVNGATDIVNDLTFDANDCNELKNDEGVICKTTGTRVSIKRTNRVPKDATIEAQRNRNTTSASSYYRFTGVFRRQEF-DSTLASPLTAVFGIDG-----SGEIGDTTYKCKKREGARATKLLCTPGAAYPTP 196 MRRA L ALGIT + A + + L ++K ID + +D+WS+KG ++DP VP IG GL+ L + A + F A+DC +N GV CKT G RVSIK + R PK A ++ N N S YY +G+FRR +F + PLT V + S + + K K R T++ CTPG PTP Sbjct: 20 MRRAFFLLALGITLVMTAGQDL---FTLKNVKVIDKSKTARDQWSMKGNLDDPTMTVVPLIGQEGLTVELQDMALATLESTAFAASDCKLRRNGRGVSCKTRGARVSIKMSRR-PKGAYVQ---NSNYNSTGGYYSASGMFRRLQFLQDPIVFPLTVVLNVPSIPFPPSAMVSSCSEKIK--GAGRTTRITCTPG---PTP 208 The following BLAST results are available for this feature:
BLAST of NO07G04250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 17
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G04250 ID=NO07G04250|Name=NO07G04250|organism=Nannochloropsis oceanica|type=gene|length=2337bpback to top protein sequence of NO07G04250.1 >NO07G04250.1-protein ID=NO07G04250.1-protein|Name=NO07G04250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=224bpback to top Synonyms
Publications
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