NO07G04210, NO07G04210 (gene) Nannochloropsis oceanica

Overview
NameNO07G04210
Unique NameNO07G04210
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4411
Alignment locationchr7:1176313..1180723 -

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Properties
Property NameValue
DescriptiontRNA-dihydrouridine(47) synthase [NAD(P)( )]-like
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:1176313..1180723 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0050660flavin adenine dinucleotide binding
GO:0017150tRNA dihydrouridine synthase activity
GO:0046872metal ion binding
GO:0050660flavin adenine dinucleotide binding
GO:0046872metal ion binding
GO:0017150tRNA dihydrouridine synthase activity
GO:0016491oxidoreductase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0008033tRNA processing
GO:0055114oxidation-reduction process
GO:0055114oxidation-reduction process
GO:0008033tRNA processing
GO:0002943tRNA dihydrouridine synthesis
Vocabulary: INTERPRO
TermDefinition
IPR001269tRNA_hU_synthase
IPR000571Znf_CCCH
Homology
BLAST of NO07G04210 vs. NCBI_GenBank
Match: XP_024579658.1 (trna-dihydrouridine synthase 3 [Plasmopara halstedii] >CEG43289.1 trna-dihydrouridine synthase 3 [Plasmopara halstedii])

HSP 1 Score: 493.4 bits (1269), Expect = 1.100e-135
Identity = 272/605 (44.96%), Postives = 341/605 (56.36%), Query Frame = 0
Query:  127 DVHADKEEGLCRSFLE-KRCTYGDGCKFSHDTIGYLARKPADLGPVCPVFSTYGECPSGVTCRFGGTHIDKGRGVSIIMAKAG-----------------------------------------------------GKXXXXXXXXXXXXXXXXXXXXXXAPAKEEGTEEEAIEYNLAGY-------PAREG------KPVDWNGKVYVAPLTTVGNLPFRRVMKDLGADITCGEMALANNLLGGQKSETALLRRHPCEDVFGIQLAGAHPDMMTRTTELLVREGIKADFIDLNLGCPLDLVNNQGMGAALMGRANKLRSILSGMSTVLRKYHPPEGGATYVRLSSCPPLTIKMRTGWDEKKPTAHHLVPQIQEWAAA----------------GECDVGAVFIHGRSRQQRYTKKADWNYLQRVASSQ-----NTSLPLLPVIGNGDILSYTDHEAHKASYTGSLEPCAMLGRGALIKPWLPTEIKEQRHWDISANERLDILKNFVAYGLEHWGSDQRGVNTTRRFLLEWLSFLHRYVPVGLLEHLNQPLSMNDRPVPYRGRSDLESLMASPYDQDWIKLSEMLLGPVPASFKFVPKHKANSWE 644
            DV  D  + LCR     + C +GD CKFSHD   Y+ RKP DLG  CPVF   G C  G+ CRF   HI+K  G+   + + G                                                     GK                      +        E A +  +  Y       PA E       KPVD+  K+Y+APLTTVGNLPFRR++K  GADITCGEMA+A NLL  Q+SE ALLRRH  EDVFG+Q+AG+  D M R  ELL RE    DF+D+N+GCP+D+V   G G+ALM R  +L  ++SG  T L        G     +S  P LT+K+RTGW EK+P AH LVP++Q   A+                    + A+ +HGRSR QRYTK ADW+Y+ + + +Q     N   P +P IG GD+LSY +   H  +  G L+ C ML RGALIKPWLPTEIKE RHWDISA+ERLD+LK+FV +GLEHWGSDQ+GVN TRR+LLEW SFL RY+PVGLL+ L  P  +NDRP PY GR+DLE+LMAS    DW+K+SEMLLGPVP  F+FVPKH+AN+++
Sbjct:   88 DVEQDPADLLCRPVASGESCQFGDSCKFSHDIDDYMKRKPKDLGDCCPVFDAKGYCRYGLACRFAHAHIEKLNGIYCNVRRKGYVETPGDNMCDEVNDLSHDVRTKLRKDTYNFQSKQQMKKGKKNNKRQQRPDVDGKSTMEHAGETPQIIELPTALRLDSADSTVPIIESAPDVQVRTYLNDVQMEPASESPLLAERKPVDFKRKIYIAPLTTVGNLPFRRLLKQTGADITCGEMAMATNLLKAQQSEWALLRRHKSEDVFGVQIAGSFSDQMARVCELLARE-TDVDFVDINMGCPIDIVCRAGAGSALMTRPPRLLEVVSGALTGLELGTRMRTG----DISKSPGLTVKLRTGWSEKQPNAHKLVPKLQSVRASMAYVNAAVVTADFRLRATQSIDAITVHGRSRLQRYTKNADWDYIYQCSDAQQDTVDNNPQPHVPFIGGGDVLSYEEFNKHLQN--GKLDTC-MLARGALIKPWLPTEIKECRHWDISASERLDLLKDFVRFGLEHWGSDQKGVNRTRRYLLEWQSFLCRYIPVGLLDTL--PQRINDRPSPYYGRNDLETLMASDQAVDWVKISEMLLGPVPNGFQFVPKHRANAYQ 682          
BLAST of NO07G04210 vs. NCBI_GenBank
Match: XP_008897066.1 (hypothetical protein PPTG_05300 [Phytophthora parasitica INRA-310] >ETN17515.1 hypothetical protein PPTG_05300 [Phytophthora parasitica INRA-310])

HSP 1 Score: 492.3 bits (1266), Expect = 2.300e-135
Identity = 289/596 (48.49%), Postives = 354/596 (59.40%), Query Frame = 0
Query:  127 DVHADKEEGLCRSFLE-KRCTYGDGCKFSHDTIGYLARKPADLGPVCPVFSTYGECPSGVTCRFGGTHIDKGRGVSIIMAKAG-----------------------------GKXXXXXXXXXXXXXXXXXXXXXXAPAKEEGTEEEAIEYNLAGYPAR----------------------------EGKPVDWNGKVYVAPLTTVGNLPFRRVMKDLGADITCGEMALANNLLGGQKSETALLRRHPCEDVFGIQLAGAHPDMMTRTTELLVREGIKADFIDLNLGCPLDLVNNQGMGAALMGRANKLRSILSGMSTVLRKYHPPEGGATYVRLSSCPPLTIKMRTGWDEKKPTAHHLVPQIQ----------------EWAAAGECDVGAVFIHGRSRQQRYTKKADWNYLQRVASSQNTS-----LPLLPVIGNGDILSYTDHEAHKASYTGSLEPCAMLGRGALIKPWLPTEIKEQRHWDISANERLDILKNFVAYGLEHWGSDQRGVNTTRRFLLEWLSFLHRYVPVGLLEHLNQPLSMNDRPVPYRGRSDLESLMASPYDQDWIKLSEMLLGPVPASFKFVPKHKANSWE 644
            D   D    LCR     + C +GD CKFSHD   Y+ RK  DLG  CPVF   G C  G+ CRF   H++K  G+   + + G                                  XXXXXXXXXXXXXXXXXX   AK E   E                                         E KPVD+  K+Y+APLTTVGNLPFRR+MK  GADITCGEMA+A NLL  Q+SE ALLRRH  EDVFG+Q+AG+  D MTR  ELL RE    DF+D+N+GCP+D+V   G G+ALM R  +L  ++SG  T L        G T     + P LT+K+RTGW EK+PTAH L+P++Q                ++       V A+ +HGRSR QRYTK ADW+Y+ +   +Q  S     LP +P +G GD+LSY + + H  +  G L+ C ML RGALIKPWLPTEIKE+RHWDISA+ERLD+LK+FV +GLEHWGSDQ+GVN TRR+LLEW SFL RY+PVGLLE L  P  +NDRP PY GRSDLESLMAS    DW+K+SEMLLGPVP  F+FVPKH+AN+++
Sbjct:   92 DAEQDPANLLCRPVASGESCQFGDSCKFSHDIDDYMKRKLKDLGERCPVFDAIGFCRYGMACRFAKAHVEKVDGIYRNLKREGYVETPGHDLGDEVNDLTHDLRLKLRKDTYDFQSKXXXXXXXXXXXXXXXXXXGKDAKAEVAPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPERKPVDFKRKIYIAPLTTVGNLPFRRLMKQTGADITCGEMAMATNLLKAQQSEWALLRRHKSEDVFGVQIAGSFSDQMTRVCELLARE-TDIDFVDINMGCPIDIVCRAGAGSALMTRPPRLLEVVSGALTGLELGTRMRTGGTV----NTPGLTVKLRTGWSEKQPTAHKLIPKLQGVRASMAYVNSAVVTADFKLRATQSVDAITVHGRSRLQRYTKHADWDYIFQCCDAQKDSIDDKPLPRVPFVGGGDVLSYEEFDEHLQN--GKLDTC-MLARGALIKPWLPTEIKERRHWDISASERLDLLKDFVRFGLEHWGSDQKGVNRTRRYLLEWQSFLCRYIPVGLLEAL--PQRINDRPSPYYGRSDLESLMASDQAVDWVKISEMLLGPVPDGFQFVPKHRANAYQ 677          
BLAST of NO07G04210 vs. NCBI_GenBank
Match: ETI34226.1 (hypothetical protein F443_19195 [Phytophthora parasitica P1569] >ETL81265.1 hypothetical protein L917_18344 [Phytophthora parasitica])

HSP 1 Score: 491.9 bits (1265), Expect = 3.100e-135
Identity = 288/596 (48.32%), Postives = 355/596 (59.56%), Query Frame = 0
Query:  127 DVHADKEEGLCRSFLE-KRCTYGDGCKFSHDTIGYLARKPADLGPVCPVFSTYGECPSGVTCRFGGTHIDKGRGVSIIMAKAG-----------------------------GKXXXXXXXXXXXXXXXXXXXXXXAPAKEEGTEEEAIEYNLAGYPAR----------------------------EGKPVDWNGKVYVAPLTTVGNLPFRRVMKDLGADITCGEMALANNLLGGQKSETALLRRHPCEDVFGIQLAGAHPDMMTRTTELLVREGIKADFIDLNLGCPLDLVNNQGMGAALMGRANKLRSILSGMSTVLRKYHPPEGGATYVRLSSCPPLTIKMRTGWDEKKPTAHHLVPQIQ----------------EWAAAGECDVGAVFIHGRSRQQRYTKKADWNYLQRVASSQNTS-----LPLLPVIGNGDILSYTDHEAHKASYTGSLEPCAMLGRGALIKPWLPTEIKEQRHWDISANERLDILKNFVAYGLEHWGSDQRGVNTTRRFLLEWLSFLHRYVPVGLLEHLNQPLSMNDRPVPYRGRSDLESLMASPYDQDWIKLSEMLLGPVPASFKFVPKHKANSWE 644
            D   D  + LCR     + C +GD CKFSHD   Y+ RK  DLG  CPVF   G C  G+ CRF   H++K  G+   + + G                                  XXXXXXXXXXXXXXXXXX   AK E   E                                         E KPVD+  K+Y+APLTTVGNLPFRR+MK  GADITCGEMA+A NLL  Q+SE ALLRRH  EDVFG+Q+AG+  D MTR  ELL RE    DF+D+N+GCP+D+V   G G+ALM R  +L  ++SG  T L        G     + + P LT+K+RTGW EK+PTAH L+P++Q                ++       V A+ +HGRSR QRYTK ADW+Y+ +   +Q  S     LP +P +G GD+LSY + + H  +  G L+ C ML RGALIKPWLPTEIKE+RHWDISA+ERLD+LK+FV +GLEHWGSDQ+GVN TRR+LLEW SFL RY+PVGLLE L  P  +NDRP PY GRSDLESLMAS    DW+K+SEMLLGPVP  F+FVPKH+AN+++
Sbjct:   92 DAEQDPADLLCRPVASGESCQFGDSCKFSHDIDDYMKRKVKDLGERCPVFDAIGFCRYGMACRFAKAHVEKVDGIYRNLKREGYVETPGHDLGDEVNDLTHDLRLKLRKDTYDFQSKXXXXXXXXXXXXXXXXXXGKDAKAEVAPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPERKPVDFKRKIYIAPLTTVGNLPFRRLMKQTGADITCGEMAMATNLLKAQQSEWALLRRHKSEDVFGVQIAGSFSDQMTRVCELLARE-TDIDFVDINMGCPIDIVCRAGAGSALMTRPPRLLEVVSGALTGLELGTRMRTGG----IVNTPGLTVKLRTGWSEKQPTAHKLIPKLQGVRASMAYVNSAVVTADFKLRATQSVDAITVHGRSRLQRYTKHADWDYIFQCCDAQKDSIDDKPLPRVPFVGGGDVLSYEEFDEHLQN--GKLDTC-MLARGALIKPWLPTEIKERRHWDISASERLDLLKDFVRFGLEHWGSDQKGVNRTRRYLLEWQSFLCRYIPVGLLEAL--PQRINDRPSPYYGRSDLESLMASDQAVDWVKISEMLLGPVPDGFQFVPKHRANAYQ 677          
BLAST of NO07G04210 vs. NCBI_GenBank
Match: XP_009828108.1 (hypothetical protein H257_05077 [Aphanomyces astaci] >ETV82439.1 hypothetical protein H257_05077 [Aphanomyces astaci])

HSP 1 Score: 488.8 bits (1257), Expect = 2.600e-134
Identity = 263/544 (48.35%), Postives = 336/544 (61.76%), Query Frame = 0
Query:  123 RPRDDVHADKEEGLCRSFLE-KRCTYGDGCKFSHDTIGYLARKPADLGPVCPVFSTYGECPSGVTCRFGGTHIDKGR---GVSIIMAKAGGKXXXXXXXXXXXXXXXXXXXXXXAPAKEEGTEEEAIEYNLAGYP---AREGKPVDWNGKVYVAPLTTVGNLPFRRVMKDLGADITCGEMALANNLLGGQKSETALLRRHPCEDVFGIQLAGAHPDMMTRTTELLVREGIKADFIDLNLGCPLDLVNNQGMGAALMGRANKLRSILSGMSTVLRKYHPPEGGATYVRLSSCPPLTIKMRTGWDEKKPTAHHLVPQIQ---------------EWAAAGECDVGAVFIHGRSRQQRYTKKADWNYLQRVASSQNT--SLPLLPVIGNGDILSYTDHEAHKASYTGSLEPCAMLGRGALIKPWLPTEIKEQRHWDISANERLDILKNFVAYGLEHWGSDQRGVNTTRRFLLEWLSFLHRYVPVGLLEHLNQPLSMNDRPVPYRGRSDLESLMASPYDQDWIKLSEMLLGPVPASFKFVPKHKANSW 643
            RPRD    D    LCR     + C++ D CKFSHD   +L R+P DLG  CPVF+  G C  G+ C +G +H+D      G                                    K+ G  ++A ++ +         + KPVD+ GKVY+ PLTTVGNLPFRRV+K  GADITCGEMA+  NLL GQ+SE ALLRRH  ED+FG+Q+AGA  D   R  EL+ RE    DFID+N+GCP+DLV   G GAALM R  KL  ++SG  T +      E G+     ++ P LT+KMRTGW +K+P AH LVP++Q                +A     +V A+ IHGRSR QRY+K ADW Y++  A ++        + +IG GD+LSY +   H +S  G L+ C ML RGALIKPWLPTEIKE+RH+DISA+ERLD+LK+FV +G+EHWGSDQ+G+N TRR+LLEW SFL RY+PVG+LE L  P  +N RP  Y GR+DLE+LMAS    DWIK+SEMLLGPVP  F+FVPKHKAN++
Sbjct:   57 RPRDPTD-DPSTVLCRGVAAGEGCSFEDKCKFSHDVADFLKRRPKDLGDTCPVFAANGYCRYGLNCCYGLSHVDANHVNLGTPADFKATEANDLSMDNRNLLRKSTYPFRSVASTYKKKGGMAKKARDFKIDTVDNPNVPDHKPVDFKGKVYIGPLTTVGNLPFRRVLKQWGADITCGEMAMTTNLLQGQQSEWALLRRHESEDIFGVQIAGAFGDQTARVCELITRE-TSVDFIDINMGCPIDLVCKAGAGAALMNRTPKLCEVISGALTGI------EVGS--FGRATRPGLTVKMRTGWSDKQPLAHKLVPKVQSLRSGADFMNQSVVLNYAMRTNVNVDALTIHGRSRLQRYSKSADWVYVEECAKAREAGDGGRQMALIGGGDVLSYEEFHQHLSS--GVLDTC-MLARGALIKPWLPTEIKERRHFDISASERLDLLKDFVKFGMEHWGSDQKGINRTRRYLLEWQSFLCRYIPVGILEQL--PQRINARPGLYYGRNDLETLMASDQAVDWIKISEMLLGPVPEGFQFVPKHKANAY 585          
BLAST of NO07G04210 vs. NCBI_GenBank
Match: OWZ14424.1 (TRNA-dihydrouridine synthase [Phytophthora megakarya])

HSP 1 Score: 488.4 bits (1256), Expect = 3.400e-134
Identity = 286/606 (47.19%), Postives = 357/606 (58.91%), Query Frame = 0
Query:  127 DVHADKEEGLCRSFLE-KRCTYGDGCKFSHDTIGYLARKPADLGPVCPVFSTYGECPSGVTCRFGGTHIDKGRGVSIIMAKAGG---------------------------------------KXXXXXXXXXXXXXXXXXXXXXXAPAKEE--------------------------GTEEEAIEYNLAGYPAREGKPVDWNGKVYVAPLTTVGNLPFRRVMKDLGADITCGEMALANNLLGGQKSETALLRRHPCEDVFGIQLAGAHPDMMTRTTELLVREGIKADFIDLNLGCPLDLVNNQGMGAALMGRANKLRSILSGMSTVLRKYHPPEGGATYVRLSSCPPLTIKMRTGWDEKKPTAHHLVPQIQ----------------EWAAAGECDVGAVFIHGRSRQQRYTKKADWNYLQRVASSQNTS-----LPLLPVIGNGDILSYTDHEAHKASYTGSLEPCAMLGRGALIKPWLPTEIKEQRHWDISANERLDILKNFVAYGLEHWGSDQRGVNTTRRFLLEWLSFLHRYVPVGLLEHLNQPLSMNDRPVPYRGRSDLESLMASPYDQDWIKLSEMLLGPVPASFKFVPKHKANSWENA 646
            DV  D  + LCR     + C +GD CKFSHD   Y+ RKP DLG  CPVF   G C  G+ CRF   HI+K  G    + + G                                        K    XXXXXXXXXXXXXXXXXX P K +                                           E KPVD+  K+Y+APLTTVGNLPFRR++K  GADITCGEMA+A NLL  Q+SE ALLRRH  EDVFG+QLAG+  D M R  ELL RE    +F+D+N+GCP+D+V   G G+ALM R  +L  ++SG  T L        G T     + P LT+K+RTGW +K+PTAH LVP++Q                ++       V A+ +HGRSR QRYTK ADW+Y+ + + +Q  S     LP +P +G GD+LSY + + H  +  G L+ C ML RGALIKPWLPTEIKE+RHWDIS++ER D+LK+FV +GLEHWGSDQ+GVN TRR+LLEW SFL+RY+PVGLLE L  P  +NDRP PY GR+DLE+LMAS    DW+K+SEMLLGPVP  F+FVPKH+AN+++ A
Sbjct:   85 DVDQDPADLLCRPVASGEGCQFGDNCKFSHDINDYMKRKPKDLGERCPVFDAMGYCRYGMACRFATAHIEKVDGAYRNLKREGYVETPGHDLGDEVNDLTHDLRLKLRKDTYDFQSKQQMKKIKKNGKXXXXXXXXXXXXXXXXXXIPVKADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAERKPVDFKRKIYIAPLTTVGNLPFRRLLKQTGADITCGEMAMATNLLKAQQSEWALLRRHKSEDVFGVQLAGSFSDQMARVCELLARE-TDINFVDINMGCPIDIVCRAGAGSALMTRPPRLLEVVSGALTGLELGTRMRTGDTV----NTPGLTVKLRTGWSDKQPTAHKLVPKLQVVRASQAYVNAAVVTADFKLHATQSVDAIMVHGRSRLQRYTKNADWDYIFQCSDAQKDSNDDKPLPHVPFVGGGDVLSYEEFDEHLQN--GKLDTC-MLARGALIKPWLPTEIKERRHWDISSSERFDLLKDFVRFGLEHWGSDQKGVNRTRRYLLEWQSFLYRYIPVGLLETL--PQRINDRPSPYYGRNDLETLMASDQAVDWVKISEMLLGPVPDGFQFVPKHRANAYQTA 680          
BLAST of NO07G04210 vs. NCBI_GenBank
Match: XP_009517953.1 (hypothetical protein PHYSODRAFT_324006 [Phytophthora sojae] >EGZ30678.1 hypothetical protein PHYSODRAFT_324006 [Phytophthora sojae])

HSP 1 Score: 486.9 bits (1252), Expect = 9.900e-134
Identity = 290/590 (49.15%), Postives = 355/590 (60.17%), Query Frame = 0
Query:  127 DVHADKEEGLCRSFLE-KRCTYGDGCKFSHDTIGYLARKPADLGPVCPVFSTYGECPSGVTCRFGGTHIDKGRGV----------------------------------------------------SIIMAKAGGKXXXXXXXXXXXXXXXXXXXXXXAPAKEEGTEEEAIEYNLAGYPAREGKPVDWNGKVYVAPLTTVGNLPFRRVMKDLGADITCGEMALANNLLGGQKSETALLRRHPCEDVFGIQLAGAHPDMMTRTTELLVREGIKADFIDLNLGCPLDLVNNQGMGAALMGRANKLRSILSGMSTVLRKYHPPEGGATYVRLSSCPPLTIKMRTGWDEKKPTAHHLVPQIQ----------------EWAAAGECDVGAVFIHGRSRQQRYTKKADWNYLQRVASSQ-----NTSLPLLPVIGNGDILSYTDHEAHKASYTGSLEPCAMLGRGALIKPWLPTEIKEQRHWDISANERLDILKNFVAYGLEHWGSDQRGVNTTRRFLLEWLSFLHRYVPVGLLEHLNQPLSMNDRPVPYRGRSDLESLMASPYDQDWIKLSEMLLGPVPASFKFVPKHKANSW 643
            DV  D  + LCR     + C +GD CKFSHD   Y+ RKP DLG  CPVF   G C  G+ CRF   HI+K  G+                                                              XXXXXXXXXXXXXXXXXXXXXX         E A E  L      E KPVD+  K+YVAPLTTVGNLPFRR++K  GADITCGEMA+A NLL  Q+SE ALLRRH  EDVFG+Q+AG+  D M R  ELL RE  + DF+D+N+GCP+D+V   G G+ALM R  +L  ++SG  T L        G T     + P LT+K+RTGW EK+PTAH LVP++Q                ++       V A+ +HGRSR QRYTK ADW+Y+ + + +Q        LP +P +G GD+LS+ + + H  +  G LE C ML RGALIKPWLPTEIKE+RHWDISA+ERLD+LK+F  +GLEHWGSDQ+GVN TRR+LLEW SFL RY+PVGLLE L  P  +NDRP PY GR+DLE+LMAS    DW+K+SEMLLGPV   F+FVPKH+AN++
Sbjct:   90 DVEEDPADLLCRPVAAGEGCQFGDSCKFSHDVDDYMKRKPKDLGERCPVFDVVGYCRYGMACRFAKAHIEKVDGIYRNVKRDDYVEGNDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEMEPAAESPLLA----ERKPVDFKQKIYVAPLTTVGNLPFRRLLKQTGADITCGEMAMATNLLKAQQSEWALLRRHKSEDVFGVQIAGSFSDQMARVCELLARE-TEIDFVDINMGCPIDVVCRVGAGSALMNRPPRLLEVVSGALTGLELGTRMRTGGTV----NTPGLTVKLRTGWSEKQPTAHKLVPKLQAVRASQAYVNAAVVTADFKLRATQSVDAIMVHGRSRLQRYTKNADWDYIFQCSDAQIDLIDEKPLPHVPFVGGGDVLSHEEFDEHLQN--GKLETC-MLARGALIKPWLPTEIKERRHWDISASERLDLLKDFCRFGLEHWGSDQKGVNRTRRYLLEWQSFLCRYIPVGLLEAL--PQRINDRPSPYYGRNDLETLMASDQAVDWVKISEMLLGPVQDGFQFVPKHRANAY 665          
BLAST of NO07G04210 vs. NCBI_GenBank
Match: OQR97662.1 (tRNA-dihydrouridine synthase 3 [Achlya hypogyna])

HSP 1 Score: 481.9 bits (1239), Expect = 3.200e-132
Identity = 268/571 (46.94%), Postives = 343/571 (60.07%), Query Frame = 0
Query:  123 RPRDDVHADKEEGLCRSFLE-KRCTYGDGCKFSHDTIGYLARKPADLGPVCPVFSTYGECPSGVTCRFGGTHIDKGRGVSIIMAKAGGK----XXXXXXXXXXXXXXXXXXXXXXAPAKEEGTEEEA---IEYNLAGYPAREG-KPVDWNGKVYVAPLTTVGNLPFRRVMKDLGADITCGEMALANNLLGGQKSETALLRRHPCEDVFGIQLAGAHPDMMTRTTELLVREGIKADFIDLNLGCPLDL-------------VNNQGMGAALMGRANKLRSILSGMSTVLRKYHPPEGGATYVRLSSCPPLTIKMRTGWDEKKPTAHHLVPQIQEWAAAGE---------------CDVGAVFIHGRSRQQRYTKKADWNYLQRVASSQNTSLPLLPVIGNGDILSYTDHEAHKASYTGSLEPCAML--------------GRGALIKPWLPTEIKEQRHWDISANERLDILKNFVAYGLEHWGSDQRGVNTTRRFLLEWLSFLHRYVPVGLLEHLNQPLSMNDRPVPYRGRSDLESLMASPYDQDWIKLSEMLLGPVPASFKFVPKHKANSW 643
            RPRD    D    LCR     + C +GD CKFSHD   Y+ R+P D    CPV++  G C  G+ CR+G +H+D   G   +   A  K                          A  +++G + +    +EY++   P     KPVD+ GK++V PLTTVGNLPFRRV+K  GADIT GEMA+A NLL GQ SE ALLRRH  EDVFG+Q+AGA+ D + R  EL+ R+    DFID+N+GCP+DL             +   G GAALM RA KL S++SG  T +      E G+  + L+S P LT+KMR GW EK P AH L+P++Q   ++ E                 V A+ IHGRSR QRYTK ADW Y+   + ++      + +IG GD+LSY +   H  S  G ++ C +               G GALIKPWLPTEIKE+RH+DISA+ERLDILK+FV  GLEHWGSDQ+G+N TRR+LLEW SFL RYVPVG+LE L  P  +NDRP+PY GR+DLE+LMAS    DW+K+SEMLLGPVP  F+FVPKHKAN++
Sbjct:   71 RPRDAAE-DPSTMLCRGVAAGEGCAFGDSCKFSHDVADYMKRRPKDFEGPCPVYTALGYCRYGLNCRYGLSHVD-ASGTKNLGTPADEKSVEVNDLDTATRDMLRKNKYPFRSVPASHQKKGKKPKTARDVEYDVLDNPEPAAHKPVDFKGKIFVGPLTTVGNLPFRRVLKHWGADITIGEMAMATNLLQGQASEWALLRRHESEDVFGVQIAGAYGDQIARVCELITRK-TSVDFIDINMGCPIDLGERALSLHSLTPAMCKSGAGAALMNRAPKLCSVVSGALTGI------ELGS--LGLASRPSLTVKMRAGWSEKTPIAHKLLPKVQSTVSSAEFMNQSVVLNYALKTNVHVDALTIHGRSRLQRYTKNADWVYVAECSDARGED-KSMQMIGGGDVLSYEEFHEHLKS--GQIDTCMLARFGYAVCEHIPHGRGSGALIKPWLPTEIKERRHYDISASERLDILKDFVKCGLEHWGSDQKGINRTRRYLLEWQSFLCRYVPVGILEKL--PQRINDRPMPYYGRNDLETLMASDQATDWVKISEMLLGPVPEGFQFVPKHKANAY 625          
BLAST of NO07G04210 vs. NCBI_GenBank
Match: CCA23213.1 (tRNAdihydrouridine synthase 3 putative [Albugo laibachii Nc14])

HSP 1 Score: 481.1 bits (1237), Expect = 5.400e-132
Identity = 260/572 (45.45%), Postives = 343/572 (59.97%), Query Frame = 0
Query:  123 RPRDDVHADKEEGLCRSF-LEKRCTYGDGCKFSHDTIGYLARKPADLGPVCPVFSTYGECPSGVTCRFGGTHIDKGRGVSIIMAK------------------------------AGGKXXXXXXXXXXXXXXXXXXXXXXAPAK-EEGTEEEAIEYNLAGYP-AREGKPVDWNGKVYVAPLTTVGNLPFRRVMKDLGADITCGEMALANNLLGGQKSETALLRRHPCEDVFGIQLAGAHPDMMTRTTELLVREGIKADFIDLNLGCPLDLVNNQGMGAALMGRANKLRSILSGMSTVLR--KYHPPEGGATYVRLSS--CPPLTIKMRTGWDEKKPTAHHLVPQI--------------QEWAAAGEC-DVGAVFIHGRSRQQRYTKKADWNYLQRVASSQNTSLPLLPVIGNGDILSYTDHEAHKASYTGSLEPCAMLGRGALIKPWLPTEIKEQRHWDISANERLDILKNFVAYGLEHWGSDQRGVNTTRRFLLEWLSFLHRYVPVGLLEHLNQPLSMNDRPVPYRGRSDLESLMASPYDQDWIKLSEMLLGPVPASFKFVPKHKANSW 643
            RP D V  D  + LCR   + K C YG+ CKFSH+   ++ RKP D+ P CP+F ++GEC  G+ CRF   H+      S  +A+                                 +                      +P K    T     +  +A  P   E K +D++ K+YVAPLTTVGNLPFRR++K  GADITCGEMA+++N+L  Q+SE ALLRRH  EDVFG+Q+AGAH D M R  ELL RE    DFID+N+GCP+D+V   G G+ALM R  +L  ++SG  T ++  + H  +        S+   P L++K+RTGW EK+P+AH +V +I                W    +   V A+ IHGRSR QRYTK+ADW+Y+ R A + +  +     IG GD+LS+ + + H  +  G L+ C M+ RGALIKPWLP EIKE+RH+DISA+ER D+LK+FV +GLEHWG+DQ+GVN TRR+LLEW SFL RY+PVG+LE L  P  +NDRP PY GR+DLE+LMAS    DWIKLSE+LLG VP  FKFVPKHKAN++
Sbjct:   52 RPIDQVE-DPSDVLCRFLAVSKPCEYGERCKFSHEIKDFMKRKPKDIHPYCPIFESFGECEYGLKCRFASVHVANTTQSSDSVAENVTEXXXXXXXXXXXXXXXXXXXHLSAELCESLRKNRYCFGCIQRKDKRKPKTDSRSPGKLHPDTNPILSDEEVAPSPLLSERKQIDFHRKIYVAPLTTVGNLPFRRLLKQTGADITCGEMAMSSNILQAQRSEWALLRRHKSEDVFGVQIAGAHGDQMARVCELLTRE-TDVDFIDINMGCPIDIVCKSGSGSALMTRPARLLEVISGALTGIQIGQQHRLQSRKIVANSSAFCYPALSVKLRTGWSEKQPSAHKVVSKIISTRSSHTYVSMNTAHWCKLDDSQSVRAIAIHGRSRLQRYTKEADWDYIYRCADTSSDIVSGTSFIGGGDVLSFVEFDEHLKN--GKLDTC-MVARGALIKPWLPIEIKERRHFDISASERFDLLKDFVKFGLEHWGTDQKGVNRTRRYLLEWQSFLCRYIPVGILEQL--PQRINDRPAPYYGRNDLETLMASDQAVDWIKLSELLLGSVPEEFKFVPKHKANAF 616          
BLAST of NO07G04210 vs. NCBI_GenBank
Match: CCI10295.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 481.1 bits (1237), Expect = 5.400e-132
Identity = 258/571 (45.18%), Postives = 341/571 (59.72%), Query Frame = 0
Query:  123 RPRDDVHADKEEGLCRSF-LEKRCTYGDGCKFSHDTIGYLARKPADLGPVCPVFSTYGECPSGVTCRFGGTH-IDKGRGVSIIMAKAGG-----------------------------KXXXXXXXXXXXXXXXXXXXXXXAPAKEEGTEEEAIEYNLAGYP-AREGKPVDWNGKVYVAPLTTVGNLPFRRVMKDLGADITCGEMALANNLLGGQKSETALLRRHPCEDVFGIQLAGAHPDMMTRTTELLVREGIKADFIDLNLGCPLDLVNNQGMGAALMGRANKLRSILSGMSTVLR--KYHPPEGGATYVRLSS--CPPLTIKMRTGWDEKKPTAHHLVPQI--------------QEWAAAGEC-DVGAVFIHGRSRQQRYTKKADWNYLQRVASSQNTSLPLLPVIGNGDILSYTDHEAHKASYTGSLEPCAMLGRGALIKPWLPTEIKEQRHWDISANERLDILKNFVAYGLEHWGSDQRGVNTTRRFLLEWLSFLHRYVPVGLLEHLNQPLSMNDRPVPYRGRSDLESLMASPYDQDWIKLSEMLLGPVPASFKFVPKHKANSW 643
            RP D V  D    LCR   + + C YG+ CKFSH+   Y+ RKP D+   CP+F  +GEC  G+ CRF   H ++KG    +++                                  +                      +P + +   +  +       P   E K +D+  K+YVAPLTTVGNLPFRR++K  GADITCGEMA+++N+L  Q+SE ALLRRH  EDVFG+Q+AG H D M R  ELL RE    DFID+N+GCP+DLV   G G+ALM R  +L  ++SG  T ++  + H  +        S+  CP L++K+RTGW EK+P+AH LV +I               +W        V A+ IHGRSR QRYTK+ADW+Y+ R A + + ++     IG GD+LS+ + + H  +  G L+ C M+ RGALIKPWLP EIKE+RH+DISA+ER D+LK+FV +GLEHWG+DQ+GVN TRR+LLEW SFL RYVPVG+LEHL  P  +NDRP PY GR+DLE+LMAS    DWIKLSE+LLG VP  F+F PKHKAN++
Sbjct:  368 RPIDQVE-DPSVVLCRFIAVNEPCQYGESCKFSHEISDYMKRKPKDIHSHCPLFDAFGECEYGLKCRFASAHTVNKGHASDVVIENVTEXXXXXXXXXXXXXXXXXXNQLSLDLRECLRKNKYRFGCIKRKDKRNQKSGSRSPKEADPDIKPPLPEEADPCPLIPERKKIDFKRKIYVAPLTTVGNLPFRRLLKQTGADITCGEMAMSSNILQAQQSEWALLRRHKSEDVFGVQIAGGHGDQMARVCELLTRE-TDIDFIDINMGCPIDLVCRAGSGSALMTRPARLLEVISGALTGIQIGQQHRLQSRKILASSSAFYCPALSVKLRTGWSEKQPSAHKLVSKISSTRSSMTFVDLDSSQWCKLDNSQSVRAIAIHGRSRLQRYTKEADWDYIYRCADACSDNVVDTSFIGGGDVLSFVEFDEHLKN--GKLDTC-MIARGALIKPWLPIEIKERRHFDISASERFDLLKDFVKFGLEHWGTDQKGVNRTRRYLLEWQSFLCRYVPVGILEHL--PQKINDRPAPYYGRNDLETLMASDQAVDWIKLSELLLGSVPDDFEFAPKHKANAF 931          
BLAST of NO07G04210 vs. NCBI_GenBank
Match: XP_011995028.1 (PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like isoform X2 [Ovis aries musimon])

HSP 1 Score: 480.3 bits (1235), Expect = 9.200e-132
Identity = 267/572 (46.68%), Postives = 338/572 (59.09%), Query Frame = 0
Query:  129 HADKEEGLCRSFLEK---RCTYGDGCKFSHDTIGYLARKPADLGPVCPVFSTYGECPSGVTCRFGGTH----------------------IDKGRGVSIIMAKAGGKXXXXXXXXXXXXXXXXXXXXXXAPAKEEGTEEEAI-------------EYNLAGYPA-------------------REGKPVDWNGKVYVAPLTTVGNLPFRRVMKDLGADITCGEMALANNLLGGQKSETALLRRHPCEDVFGIQLAGAHPDMMTRTTELLVREGIKADFIDLNLGCPLDLVNNQGMGAALMGRANKLRSILSGMSTVLRKYHPPEGGATYVRLSSCPPLTIKMRTGWDEKKPTAHHLVPQIQEWAAAGECDVGAVFIHGRSRQQRYTKKADWNYLQRVASSQNTSLPLLPVIGNGDILSYTDHEAHKASYTGSLEPCAMLGRGALIKPWLPTEIKEQRHWDISANERLDILKNFVAYGLEHWGSDQRGVNTTRRFLLEWLSFLHRYVPVGLLEHLNQPLSMNDRPVPYRGRSDLESLMASPYDQDWIKLSEMLLGPVPASFKFVPKHKANSWE 644
            H DK + LC S +++   +C YGD C+F HD   YL  KPADLGP C +F T+G CP GVTCRF G H                      +DK     +   K   K                       P   EG E E               E +  G P+                   RE + +D +GK+Y+APLTT GNLPFRR+ K  GAD+TCGEMA+  NLL GQ SE ALL+RHPCED+FG+QL GA PD MT+  ELL R  I+ DF+D+N+GCP+DLV  +G G ALM R  K + I+ GM+ VL                   PLT+K+RTG  E+   AH L+P +++W AA       V +HGRSR+QRYTK ADW Y+++  ++ +     +P+ GNGDILSY D  A++A  TG      M+ RGAL+KPWL TEIKEQRHWDIS++ERLDIL++F  YGLEHWGSD +GV  TRRFLLEWLSFL RYVP+GLLE L  P  +N+RP  Y GR+ LE+LMAS    DWI++SEMLLGPVP +F F+PKHKAN+++
Sbjct:  117 HYDKNK-LCPSLVQESAAKCFYGDRCRFLHDVGHYLETKPADLGPSCVLFETFGRCPYGVTCRFAGAHLGPEGQNLVREGLVQAPPVRNGLDKALQQQLRKRKIHFKHAEQALRQLSRGPLPGPTPEATVP---EGREAEGAPGQDNCDSQLAPQEPDTVGPPSGPLRTFGPLTDEDVVRLRPREKRRLDISGKLYLAPLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQTSEWALLKRHPCEDIFGVQLEGAFPDTMTKCAELLNRT-IEVDFVDINVGCPIDLVFKKGGGCALMNRLAKFQQIVRGMNQVLD-----------------VPLTVKLRTGVQERVNLAHRLLPDLRDWGAA------LVTLHGRSREQRYTKLADWQYIEQCVAAASP----MPLFGNGDILSYED--ANRALQTGVAG--VMIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTHYGLEHWGSDTQGVEKTRRFLLEWLSFLCRYVPLGLLERL--PQRINERPPYYLGRNYLETLMASQKAADWIRISEMLLGPVPPNFVFLPKHKANAYK 650          
The following BLAST results are available for this feature:
BLAST of NO07G04210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_024579658.11.100e-13544.96trna-dihydrouridine synthase 3 [Plasmopara halsted... [more]
XP_008897066.12.300e-13548.49hypothetical protein PPTG_05300 [Phytophthora para... [more]
ETI34226.13.100e-13548.32hypothetical protein F443_19195 [Phytophthora para... [more]
XP_009828108.12.600e-13448.35hypothetical protein H257_05077 [Aphanomyces astac... [more]
OWZ14424.13.400e-13447.19TRNA-dihydrouridine synthase [Phytophthora megakar... [more]
XP_009517953.19.900e-13449.15hypothetical protein PHYSODRAFT_324006 [Phytophtho... [more]
OQR97662.13.200e-13246.94tRNA-dihydrouridine synthase 3 [Achlya hypogyna][more]
CCA23213.15.400e-13245.45tRNAdihydrouridine synthase 3 putative [Albugo lai... [more]
CCI10295.15.400e-13245.18unnamed protein product [Albugo candida][more]
XP_011995028.19.200e-13246.68PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G04210.1NO07G04210.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|581467gene_2769Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101321g2gene3604Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G04210.1NO07G04210.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G04210 ID=NO07G04210|Name=NO07G04210|organism=Nannochloropsis oceanica|type=gene|length=4411bp
ATGACAACCCTTGGAAATGCTACTAAGCCTGTTCCAGCTGCTGTTGCACT
AGCAGCACCCATCCAGAACGACACCAGCGGTACAGCCCCAGCAACTGCGC
CCGTGGCGCCGTCCAAAGCACAACAGGCGATGGAGCAGCAGACACAGCAC
AAAGATAATGGAGGAGAAAATGGGGGCGATGGCGTTGATACGTGGCATGG
TGGAGGTAAAAAAGTCGGCATGGACGTCCTTGTCAAGGCAGAgtaagtgg
gggaataacccaagaaaatgcggtcagaaaccacctgagggtgggaacac
ggatatgacattcgtagcgcattcacaagaggtctctctctctttcgtca
taccattctttctctgtacacatttcagGTATCGCGTCCCGCAATTTGTC
CCGCTTTCGGCCTTCCCTGCTTCCTTCCCCCCACCTTCCCCCATAGACCA
TGACCACAACGGTAACGGCTCCAAAAGGAAAGGCAGCGGCCGCAACCATA
AACGACCCCGGGACGATGTGCATGCTGATAAGGAAGAAGGCCTCTGCCGG
TCCTTTTTGGAGAAGCGGTGTACTTATGGGGATGGATGTAAATTCTCGCA
TGATACGATCGGGTACCTTGCACGGAAGCCGGCGgtgagtgagtgattga
tgtagcaggggagggagggtgggagggcatgacaggaaaagagaagggga
acaattcaatgccatttgtgctagaaacattatgtttcggagtcattaat
taagcactctgttatgttcctttctttactcagGACCTAGGACCCGTGTG
CCCGGTGTTTTCCACTTATGGAGAATGCCCGAGCGGGGTCACGTGCCGCT
TTGGAGGGACGCACATAGACAAGGGAAGAGGTGTCTCTATCATCATGGCC
AAGGCGGGAGGGAAGGAGGGAGGGAAGGATGATGAAgtgacggcgggtgc
atctctcactgctggagatgggaaagcagcgacaaccgcgacgacggcag
caccaccacaagtcgaagcagcgagtgcctccccccctcctccatccctg
cggagcgaaatattttccctggcccttctctcctcctcctccggcgcaat
gcctaccctttccttacccctcgcgccacaaagcagGGAGGGAAGCAAGG
GGATAAGAAGGGCAAGGCCACCGAAGAGCAGGCACCTGCAAAGGAGGAAG
GGACGGAGGAAGAGGCGATCGAGTATAACCTCGCTGGATACCCAGCGAGG
GAAGGGAAACCAGTCGATTGGAATGGGAAGGTGTACGTGGCGCCTCTGAC
GACGGTTGGAAACTTGCCGTTTCGGAGGGTGATGAAGgtgagggagggag
ggagggggggaaggagggagggagggaggggctggggcgcaggccgcgag
ggtcctaactttgtacgcttgtgcttccctcattagtccttaaccttgct
cttgatgcttttctcttccttttggcctgtgtgattatggtccgtcgctt
gttgatcatgcgcctgacccctactgccttcccctacccgctcctccctc
attcccctccttcgtctcccagGACCTGGGCGCGGATATAACGTGCGGGG
AGATGGCCTTGGCGAATAATCTACTCGGGGGGCAAAAGAGTGAGACGGCC
CTCCTCCGCCGACACCCCTGCGAGGACGTCTTTGGGATCCAGgtgcctcc
ctctcctccctccttccctccatccgtccccttcccttcccttcccttct
tgtcggcaagcatcgttttcaccttctctccctcccgcttcccctctccc
cctctctctacccctctctcttgtccctctgatcaagCTTGCCGGCGCTC
ACCCGGACATGATGACCCGCACCACCGAGCTTCTCGTCCGCGAGGGCATC
AAGgtacctcaccctccctccttctttttctcgttctcctccttctcctt
ctccttctccttctccttttcctcctctttctttccctccctctttacgc
cctcctggctcatccctctcctccctccctccctctcccctccctcccag
GCAGACTTTATAGATCTCAATTTGGGCTGTCCTCTAGATCTAGTGAACAA
CCAAGgtatccctccctccctccctccctccctccctccctccctccctc
cctccactctctctccctccctccctgcctccctccctccttccctccct
ccctcccttccatcctccctcctgtcatccacgcttcttccttccctccc
tcccccccatcctccctccctccctagGCATGGGCGCGGCCTTGATGGGT
CGCGCCAATAAACTCCGAAGCATTCTCTCCGGCATGTCCACCGTTCTCCG
CAAGTATCACCCACCCGgtgcgccctctctccctgcctccctccctccct
ccctccctccctccctccctccctccctccctccctccctccctccctcc
ctccctccctcccactcctcctcctcccgatttgctcgctcacttgaggg
gcttacatttctctccctcttttcacgccccctgagcagAAGGAGGGGCT
ACCTATGTTCGCCTCTCGTCCTGCCCGCCCCTTACTATCAAGATGCGCAC
CGGCTGGGATGAGAAGAAACCTACCGCCCACCACCTCGTGCCACAGgtac
ctccctccctccctccctccctccctccctccttcattccctgtttcctc
ccgcccgccctcctccctccctccctccctccctccctcgtccatgctca
gaacttcccttttctcattcccgccctccctccctccctctctctagATC
CAGGAGTGGGCAGCCGCGGGAGAGTGTGACGTTGGTGCTGTCTTTATCCA
CGGCCGCTCCCGACAACAACGgtgagttacatcaccctctctccttgcct
tcctctctcttttcgcccctgctttcctcaaatatctaccgctcgctcat
acctgatcccctccctccctccctccctctctccctccctccctccccaa
atatctctccctcacctcagCTACACCAAAAAGGCCGACTGGAATTACCT
CCAGCGCGTCGCCTCCTCCCAGAACACCTCCCTCCCCCTCCTTCCCGTCA
TCGGCAACGGCGACATCCTGTCCTACACCGATCACGAGGCACACAAGgta
ttatccctttccctccctccctccctccctccctccctaaacctctcagc
cccttgatcccctgagacgaaaacactcctggctcatccctccccccctc
cctccctccctccctccctccctccctccctccctccccagGCCTCCTAC
ACCGGCTCTCTCGAGCCTTGTGCTATGCTAGGCCGAGGCGCCCTCATTAA
GCCGTGGCTACCCACCGAAATTAAGGAACAACGGCATTGGGATATATCCG
CCAACGAACGgtgagtgaccgattcatacattggatgtctgcgtaaagac
atgggattcaggaacaagggccttgggattgggatatacagaataacata
atatttatattatattcttatattcttacattacattatatgagttcttg
cttagtcccgcgcttcccttcctggtcttcatctctccttcctcttctcc
aagagcacttattgcgtcaagctcacgattttctcttcacttagttctct
ccctctctccctctctccctccctccctccctccctccccctgttcctag
CCTCGATATTCTGAAGAATTTTGTCGCCTATGGTCTTGAGCATTGGGGCT
CGGATCAGCGGGGCGTTAACACCACTCGTCGTTTCTTGCTCGAATGGCTC
TCGTTTCTGCACCGgtaagcgggggaagggggagggaaggaggcagagag
ggggggaagaagggagggagggaggaagggaaggagggagacagctagaa
gcggtggcacgaatgagggaggcggtttgaggcgttccctttgcacgcac
tcgtgtattcgttcgctccctttcacccattcctccctccccccctcctt
ccccccctccctccccccctcctcctccctccctccccccctccctccct
ttctccccagCTACGTGCCTGTCGGTCTATTGGAGCACCTTAATCAGCCC
CTGAGTATGAATGACCGCCCCGTCCCTTACCGGGGTCGCAGCGACCTCGA
GTCTCTCATGGCTTCTCCCTACGATCAGgtacgtgcccgtctctccctcc
ctccctccctccctccctccctccctctctccctcggccaccgggaccct
ccctccctccctccctccctctccatttttctccttccctccctccctcc
ttcccgtagGACTGGATCAAGCTGTCTGAGATGCTATTAGGGCCTGTGCC
CGCGTCCTTTAAATTCGTACCGAAGCACAAGGCCAACAGCTGGGAGAATG
CCAACGGCTAA
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protein sequence of NO07G04210.1

>NO07G04210.1-protein ID=NO07G04210.1-protein|Name=NO07G04210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=648bp
MTTLGNATKPVPAAVALAAPIQNDTSGTAPATAPVAPSKAQQAMEQQTQH
KDNGGENGGDGVDTWHGGGKKVGMDVLVKAEYRVPQFVPLSAFPASFPPP
SPIDHDHNGNGSKRKGSGRNHKRPRDDVHADKEEGLCRSFLEKRCTYGDG
CKFSHDTIGYLARKPADLGPVCPVFSTYGECPSGVTCRFGGTHIDKGRGV
SIIMAKAGGKEGGKDDEGGKQGDKKGKATEEQAPAKEEGTEEEAIEYNLA
GYPAREGKPVDWNGKVYVAPLTTVGNLPFRRVMKDLGADITCGEMALANN
LLGGQKSETALLRRHPCEDVFGIQLAGAHPDMMTRTTELLVREGIKADFI
DLNLGCPLDLVNNQGMGAALMGRANKLRSILSGMSTVLRKYHPPEGGATY
VRLSSCPPLTIKMRTGWDEKKPTAHHLVPQIQEWAAAGECDVGAVFIHGR
SRQQRYTKKADWNYLQRVASSQNTSLPLLPVIGNGDILSYTDHEAHKASY
TGSLEPCAMLGRGALIKPWLPTEIKEQRHWDISANERLDILKNFVAYGLE
HWGSDQRGVNTTRRFLLEWLSFLHRYVPVGLLEHLNQPLSMNDRPVPYRG
RSDLESLMASPYDQDWIKLSEMLLGPVPASFKFVPKHKANSWENANG*
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Synonyms
Publications