NO07G04210, NO07G04210 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G04210 vs. NCBI_GenBank
Match: XP_024579658.1 (trna-dihydrouridine synthase 3 [Plasmopara halstedii] >CEG43289.1 trna-dihydrouridine synthase 3 [Plasmopara halstedii]) HSP 1 Score: 493.4 bits (1269), Expect = 1.100e-135 Identity = 272/605 (44.96%), Postives = 341/605 (56.36%), Query Frame = 0 Query: 127 DVHADKEEGLCRSFLE-KRCTYGDGCKFSHDTIGYLARKPADLGPVCPVFSTYGECPSGVTCRFGGTHIDKGRGVSIIMAKAG-----------------------------------------------------GKXXXXXXXXXXXXXXXXXXXXXXAPAKEEGTEEEAIEYNLAGY-------PAREG------KPVDWNGKVYVAPLTTVGNLPFRRVMKDLGADITCGEMALANNLLGGQKSETALLRRHPCEDVFGIQLAGAHPDMMTRTTELLVREGIKADFIDLNLGCPLDLVNNQGMGAALMGRANKLRSILSGMSTVLRKYHPPEGGATYVRLSSCPPLTIKMRTGWDEKKPTAHHLVPQIQEWAAA----------------GECDVGAVFIHGRSRQQRYTKKADWNYLQRVASSQ-----NTSLPLLPVIGNGDILSYTDHEAHKASYTGSLEPCAMLGRGALIKPWLPTEIKEQRHWDISANERLDILKNFVAYGLEHWGSDQRGVNTTRRFLLEWLSFLHRYVPVGLLEHLNQPLSMNDRPVPYRGRSDLESLMASPYDQDWIKLSEMLLGPVPASFKFVPKHKANSWE 644 DV D + LCR + C +GD CKFSHD Y+ RKP DLG CPVF G C G+ CRF HI+K G+ + + G GK + E A + + Y PA E KPVD+ K+Y+APLTTVGNLPFRR++K GADITCGEMA+A NLL Q+SE ALLRRH EDVFG+Q+AG+ D M R ELL RE DF+D+N+GCP+D+V G G+ALM R +L ++SG T L G +S P LT+K+RTGW EK+P AH LVP++Q A+ + A+ +HGRSR QRYTK ADW+Y+ + + +Q N P +P IG GD+LSY + H + G L+ C ML RGALIKPWLPTEIKE RHWDISA+ERLD+LK+FV +GLEHWGSDQ+GVN TRR+LLEW SFL RY+PVGLL+ L P +NDRP PY GR+DLE+LMAS DW+K+SEMLLGPVP F+FVPKH+AN+++ Sbjct: 88 DVEQDPADLLCRPVASGESCQFGDSCKFSHDIDDYMKRKPKDLGDCCPVFDAKGYCRYGLACRFAHAHIEKLNGIYCNVRRKGYVETPGDNMCDEVNDLSHDVRTKLRKDTYNFQSKQQMKKGKKNNKRQQRPDVDGKSTMEHAGETPQIIELPTALRLDSADSTVPIIESAPDVQVRTYLNDVQMEPASESPLLAERKPVDFKRKIYIAPLTTVGNLPFRRLLKQTGADITCGEMAMATNLLKAQQSEWALLRRHKSEDVFGVQIAGSFSDQMARVCELLARE-TDVDFVDINMGCPIDIVCRAGAGSALMTRPPRLLEVVSGALTGLELGTRMRTG----DISKSPGLTVKLRTGWSEKQPNAHKLVPKLQSVRASMAYVNAAVVTADFRLRATQSIDAITVHGRSRLQRYTKNADWDYIYQCSDAQQDTVDNNPQPHVPFIGGGDVLSYEEFNKHLQN--GKLDTC-MLARGALIKPWLPTEIKECRHWDISASERLDLLKDFVRFGLEHWGSDQKGVNRTRRYLLEWQSFLCRYIPVGLLDTL--PQRINDRPSPYYGRNDLETLMASDQAVDWVKISEMLLGPVPNGFQFVPKHRANAYQ 682
BLAST of NO07G04210 vs. NCBI_GenBank
Match: XP_008897066.1 (hypothetical protein PPTG_05300 [Phytophthora parasitica INRA-310] >ETN17515.1 hypothetical protein PPTG_05300 [Phytophthora parasitica INRA-310]) HSP 1 Score: 492.3 bits (1266), Expect = 2.300e-135 Identity = 289/596 (48.49%), Postives = 354/596 (59.40%), Query Frame = 0 Query: 127 DVHADKEEGLCRSFLE-KRCTYGDGCKFSHDTIGYLARKPADLGPVCPVFSTYGECPSGVTCRFGGTHIDKGRGVSIIMAKAG-----------------------------GKXXXXXXXXXXXXXXXXXXXXXXAPAKEEGTEEEAIEYNLAGYPAR----------------------------EGKPVDWNGKVYVAPLTTVGNLPFRRVMKDLGADITCGEMALANNLLGGQKSETALLRRHPCEDVFGIQLAGAHPDMMTRTTELLVREGIKADFIDLNLGCPLDLVNNQGMGAALMGRANKLRSILSGMSTVLRKYHPPEGGATYVRLSSCPPLTIKMRTGWDEKKPTAHHLVPQIQ----------------EWAAAGECDVGAVFIHGRSRQQRYTKKADWNYLQRVASSQNTS-----LPLLPVIGNGDILSYTDHEAHKASYTGSLEPCAMLGRGALIKPWLPTEIKEQRHWDISANERLDILKNFVAYGLEHWGSDQRGVNTTRRFLLEWLSFLHRYVPVGLLEHLNQPLSMNDRPVPYRGRSDLESLMASPYDQDWIKLSEMLLGPVPASFKFVPKHKANSWE 644 D D LCR + C +GD CKFSHD Y+ RK DLG CPVF G C G+ CRF H++K G+ + + G XXXXXXXXXXXXXXXXXX AK E E E KPVD+ K+Y+APLTTVGNLPFRR+MK GADITCGEMA+A NLL Q+SE ALLRRH EDVFG+Q+AG+ D MTR ELL RE DF+D+N+GCP+D+V G G+ALM R +L ++SG T L G T + P LT+K+RTGW EK+PTAH L+P++Q ++ V A+ +HGRSR QRYTK ADW+Y+ + +Q S LP +P +G GD+LSY + + H + G L+ C ML RGALIKPWLPTEIKE+RHWDISA+ERLD+LK+FV +GLEHWGSDQ+GVN TRR+LLEW SFL RY+PVGLLE L P +NDRP PY GRSDLESLMAS DW+K+SEMLLGPVP F+FVPKH+AN+++ Sbjct: 92 DAEQDPANLLCRPVASGESCQFGDSCKFSHDIDDYMKRKLKDLGERCPVFDAIGFCRYGMACRFAKAHVEKVDGIYRNLKREGYVETPGHDLGDEVNDLTHDLRLKLRKDTYDFQSKXXXXXXXXXXXXXXXXXXGKDAKAEVAPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPERKPVDFKRKIYIAPLTTVGNLPFRRLMKQTGADITCGEMAMATNLLKAQQSEWALLRRHKSEDVFGVQIAGSFSDQMTRVCELLARE-TDIDFVDINMGCPIDIVCRAGAGSALMTRPPRLLEVVSGALTGLELGTRMRTGGTV----NTPGLTVKLRTGWSEKQPTAHKLIPKLQGVRASMAYVNSAVVTADFKLRATQSVDAITVHGRSRLQRYTKHADWDYIFQCCDAQKDSIDDKPLPRVPFVGGGDVLSYEEFDEHLQN--GKLDTC-MLARGALIKPWLPTEIKERRHWDISASERLDLLKDFVRFGLEHWGSDQKGVNRTRRYLLEWQSFLCRYIPVGLLEAL--PQRINDRPSPYYGRSDLESLMASDQAVDWVKISEMLLGPVPDGFQFVPKHRANAYQ 677
BLAST of NO07G04210 vs. NCBI_GenBank
Match: ETI34226.1 (hypothetical protein F443_19195 [Phytophthora parasitica P1569] >ETL81265.1 hypothetical protein L917_18344 [Phytophthora parasitica]) HSP 1 Score: 491.9 bits (1265), Expect = 3.100e-135 Identity = 288/596 (48.32%), Postives = 355/596 (59.56%), Query Frame = 0 Query: 127 DVHADKEEGLCRSFLE-KRCTYGDGCKFSHDTIGYLARKPADLGPVCPVFSTYGECPSGVTCRFGGTHIDKGRGVSIIMAKAG-----------------------------GKXXXXXXXXXXXXXXXXXXXXXXAPAKEEGTEEEAIEYNLAGYPAR----------------------------EGKPVDWNGKVYVAPLTTVGNLPFRRVMKDLGADITCGEMALANNLLGGQKSETALLRRHPCEDVFGIQLAGAHPDMMTRTTELLVREGIKADFIDLNLGCPLDLVNNQGMGAALMGRANKLRSILSGMSTVLRKYHPPEGGATYVRLSSCPPLTIKMRTGWDEKKPTAHHLVPQIQ----------------EWAAAGECDVGAVFIHGRSRQQRYTKKADWNYLQRVASSQNTS-----LPLLPVIGNGDILSYTDHEAHKASYTGSLEPCAMLGRGALIKPWLPTEIKEQRHWDISANERLDILKNFVAYGLEHWGSDQRGVNTTRRFLLEWLSFLHRYVPVGLLEHLNQPLSMNDRPVPYRGRSDLESLMASPYDQDWIKLSEMLLGPVPASFKFVPKHKANSWE 644 D D + LCR + C +GD CKFSHD Y+ RK DLG CPVF G C G+ CRF H++K G+ + + G XXXXXXXXXXXXXXXXXX AK E E E KPVD+ K+Y+APLTTVGNLPFRR+MK GADITCGEMA+A NLL Q+SE ALLRRH EDVFG+Q+AG+ D MTR ELL RE DF+D+N+GCP+D+V G G+ALM R +L ++SG T L G + + P LT+K+RTGW EK+PTAH L+P++Q ++ V A+ +HGRSR QRYTK ADW+Y+ + +Q S LP +P +G GD+LSY + + H + G L+ C ML RGALIKPWLPTEIKE+RHWDISA+ERLD+LK+FV +GLEHWGSDQ+GVN TRR+LLEW SFL RY+PVGLLE L P +NDRP PY GRSDLESLMAS DW+K+SEMLLGPVP F+FVPKH+AN+++ Sbjct: 92 DAEQDPADLLCRPVASGESCQFGDSCKFSHDIDDYMKRKVKDLGERCPVFDAIGFCRYGMACRFAKAHVEKVDGIYRNLKREGYVETPGHDLGDEVNDLTHDLRLKLRKDTYDFQSKXXXXXXXXXXXXXXXXXXGKDAKAEVAPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPERKPVDFKRKIYIAPLTTVGNLPFRRLMKQTGADITCGEMAMATNLLKAQQSEWALLRRHKSEDVFGVQIAGSFSDQMTRVCELLARE-TDIDFVDINMGCPIDIVCRAGAGSALMTRPPRLLEVVSGALTGLELGTRMRTGG----IVNTPGLTVKLRTGWSEKQPTAHKLIPKLQGVRASMAYVNSAVVTADFKLRATQSVDAITVHGRSRLQRYTKHADWDYIFQCCDAQKDSIDDKPLPRVPFVGGGDVLSYEEFDEHLQN--GKLDTC-MLARGALIKPWLPTEIKERRHWDISASERLDLLKDFVRFGLEHWGSDQKGVNRTRRYLLEWQSFLCRYIPVGLLEAL--PQRINDRPSPYYGRSDLESLMASDQAVDWVKISEMLLGPVPDGFQFVPKHRANAYQ 677
BLAST of NO07G04210 vs. NCBI_GenBank
Match: XP_009828108.1 (hypothetical protein H257_05077 [Aphanomyces astaci] >ETV82439.1 hypothetical protein H257_05077 [Aphanomyces astaci]) HSP 1 Score: 488.8 bits (1257), Expect = 2.600e-134 Identity = 263/544 (48.35%), Postives = 336/544 (61.76%), Query Frame = 0 Query: 123 RPRDDVHADKEEGLCRSFLE-KRCTYGDGCKFSHDTIGYLARKPADLGPVCPVFSTYGECPSGVTCRFGGTHIDKGR---GVSIIMAKAGGKXXXXXXXXXXXXXXXXXXXXXXAPAKEEGTEEEAIEYNLAGYP---AREGKPVDWNGKVYVAPLTTVGNLPFRRVMKDLGADITCGEMALANNLLGGQKSETALLRRHPCEDVFGIQLAGAHPDMMTRTTELLVREGIKADFIDLNLGCPLDLVNNQGMGAALMGRANKLRSILSGMSTVLRKYHPPEGGATYVRLSSCPPLTIKMRTGWDEKKPTAHHLVPQIQ---------------EWAAAGECDVGAVFIHGRSRQQRYTKKADWNYLQRVASSQNT--SLPLLPVIGNGDILSYTDHEAHKASYTGSLEPCAMLGRGALIKPWLPTEIKEQRHWDISANERLDILKNFVAYGLEHWGSDQRGVNTTRRFLLEWLSFLHRYVPVGLLEHLNQPLSMNDRPVPYRGRSDLESLMASPYDQDWIKLSEMLLGPVPASFKFVPKHKANSW 643 RPRD D LCR + C++ D CKFSHD +L R+P DLG CPVF+ G C G+ C +G +H+D G K+ G ++A ++ + + KPVD+ GKVY+ PLTTVGNLPFRRV+K GADITCGEMA+ NLL GQ+SE ALLRRH ED+FG+Q+AGA D R EL+ RE DFID+N+GCP+DLV G GAALM R KL ++SG T + E G+ ++ P LT+KMRTGW +K+P AH LVP++Q +A +V A+ IHGRSR QRY+K ADW Y++ A ++ + +IG GD+LSY + H +S G L+ C ML RGALIKPWLPTEIKE+RH+DISA+ERLD+LK+FV +G+EHWGSDQ+G+N TRR+LLEW SFL RY+PVG+LE L P +N RP Y GR+DLE+LMAS DWIK+SEMLLGPVP F+FVPKHKAN++ Sbjct: 57 RPRDPTD-DPSTVLCRGVAAGEGCSFEDKCKFSHDVADFLKRRPKDLGDTCPVFAANGYCRYGLNCCYGLSHVDANHVNLGTPADFKATEANDLSMDNRNLLRKSTYPFRSVASTYKKKGGMAKKARDFKIDTVDNPNVPDHKPVDFKGKVYIGPLTTVGNLPFRRVLKQWGADITCGEMAMTTNLLQGQQSEWALLRRHESEDIFGVQIAGAFGDQTARVCELITRE-TSVDFIDINMGCPIDLVCKAGAGAALMNRTPKLCEVISGALTGI------EVGS--FGRATRPGLTVKMRTGWSDKQPLAHKLVPKVQSLRSGADFMNQSVVLNYAMRTNVNVDALTIHGRSRLQRYSKSADWVYVEECAKAREAGDGGRQMALIGGGDVLSYEEFHQHLSS--GVLDTC-MLARGALIKPWLPTEIKERRHFDISASERLDLLKDFVKFGMEHWGSDQKGINRTRRYLLEWQSFLCRYIPVGILEQL--PQRINARPGLYYGRNDLETLMASDQAVDWIKISEMLLGPVPEGFQFVPKHKANAY 585
BLAST of NO07G04210 vs. NCBI_GenBank
Match: OWZ14424.1 (TRNA-dihydrouridine synthase [Phytophthora megakarya]) HSP 1 Score: 488.4 bits (1256), Expect = 3.400e-134 Identity = 286/606 (47.19%), Postives = 357/606 (58.91%), Query Frame = 0 Query: 127 DVHADKEEGLCRSFLE-KRCTYGDGCKFSHDTIGYLARKPADLGPVCPVFSTYGECPSGVTCRFGGTHIDKGRGVSIIMAKAGG---------------------------------------KXXXXXXXXXXXXXXXXXXXXXXAPAKEE--------------------------GTEEEAIEYNLAGYPAREGKPVDWNGKVYVAPLTTVGNLPFRRVMKDLGADITCGEMALANNLLGGQKSETALLRRHPCEDVFGIQLAGAHPDMMTRTTELLVREGIKADFIDLNLGCPLDLVNNQGMGAALMGRANKLRSILSGMSTVLRKYHPPEGGATYVRLSSCPPLTIKMRTGWDEKKPTAHHLVPQIQ----------------EWAAAGECDVGAVFIHGRSRQQRYTKKADWNYLQRVASSQNTS-----LPLLPVIGNGDILSYTDHEAHKASYTGSLEPCAMLGRGALIKPWLPTEIKEQRHWDISANERLDILKNFVAYGLEHWGSDQRGVNTTRRFLLEWLSFLHRYVPVGLLEHLNQPLSMNDRPVPYRGRSDLESLMASPYDQDWIKLSEMLLGPVPASFKFVPKHKANSWENA 646 DV D + LCR + C +GD CKFSHD Y+ RKP DLG CPVF G C G+ CRF HI+K G + + G K XXXXXXXXXXXXXXXXXX P K + E KPVD+ K+Y+APLTTVGNLPFRR++K GADITCGEMA+A NLL Q+SE ALLRRH EDVFG+QLAG+ D M R ELL RE +F+D+N+GCP+D+V G G+ALM R +L ++SG T L G T + P LT+K+RTGW +K+PTAH LVP++Q ++ V A+ +HGRSR QRYTK ADW+Y+ + + +Q S LP +P +G GD+LSY + + H + G L+ C ML RGALIKPWLPTEIKE+RHWDIS++ER D+LK+FV +GLEHWGSDQ+GVN TRR+LLEW SFL+RY+PVGLLE L P +NDRP PY GR+DLE+LMAS DW+K+SEMLLGPVP F+FVPKH+AN+++ A Sbjct: 85 DVDQDPADLLCRPVASGEGCQFGDNCKFSHDINDYMKRKPKDLGERCPVFDAMGYCRYGMACRFATAHIEKVDGAYRNLKREGYVETPGHDLGDEVNDLTHDLRLKLRKDTYDFQSKQQMKKIKKNGKXXXXXXXXXXXXXXXXXXIPVKADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAERKPVDFKRKIYIAPLTTVGNLPFRRLLKQTGADITCGEMAMATNLLKAQQSEWALLRRHKSEDVFGVQLAGSFSDQMARVCELLARE-TDINFVDINMGCPIDIVCRAGAGSALMTRPPRLLEVVSGALTGLELGTRMRTGDTV----NTPGLTVKLRTGWSDKQPTAHKLVPKLQVVRASQAYVNAAVVTADFKLHATQSVDAIMVHGRSRLQRYTKNADWDYIFQCSDAQKDSNDDKPLPHVPFVGGGDVLSYEEFDEHLQN--GKLDTC-MLARGALIKPWLPTEIKERRHWDISSSERFDLLKDFVRFGLEHWGSDQKGVNRTRRYLLEWQSFLYRYIPVGLLETL--PQRINDRPSPYYGRNDLETLMASDQAVDWVKISEMLLGPVPDGFQFVPKHRANAYQTA 680
BLAST of NO07G04210 vs. NCBI_GenBank
Match: XP_009517953.1 (hypothetical protein PHYSODRAFT_324006 [Phytophthora sojae] >EGZ30678.1 hypothetical protein PHYSODRAFT_324006 [Phytophthora sojae]) HSP 1 Score: 486.9 bits (1252), Expect = 9.900e-134 Identity = 290/590 (49.15%), Postives = 355/590 (60.17%), Query Frame = 0 Query: 127 DVHADKEEGLCRSFLE-KRCTYGDGCKFSHDTIGYLARKPADLGPVCPVFSTYGECPSGVTCRFGGTHIDKGRGV----------------------------------------------------SIIMAKAGGKXXXXXXXXXXXXXXXXXXXXXXAPAKEEGTEEEAIEYNLAGYPAREGKPVDWNGKVYVAPLTTVGNLPFRRVMKDLGADITCGEMALANNLLGGQKSETALLRRHPCEDVFGIQLAGAHPDMMTRTTELLVREGIKADFIDLNLGCPLDLVNNQGMGAALMGRANKLRSILSGMSTVLRKYHPPEGGATYVRLSSCPPLTIKMRTGWDEKKPTAHHLVPQIQ----------------EWAAAGECDVGAVFIHGRSRQQRYTKKADWNYLQRVASSQ-----NTSLPLLPVIGNGDILSYTDHEAHKASYTGSLEPCAMLGRGALIKPWLPTEIKEQRHWDISANERLDILKNFVAYGLEHWGSDQRGVNTTRRFLLEWLSFLHRYVPVGLLEHLNQPLSMNDRPVPYRGRSDLESLMASPYDQDWIKLSEMLLGPVPASFKFVPKHKANSW 643 DV D + LCR + C +GD CKFSHD Y+ RKP DLG CPVF G C G+ CRF HI+K G+ XXXXXXXXXXXXXXXXXXXXXX E A E L E KPVD+ K+YVAPLTTVGNLPFRR++K GADITCGEMA+A NLL Q+SE ALLRRH EDVFG+Q+AG+ D M R ELL RE + DF+D+N+GCP+D+V G G+ALM R +L ++SG T L G T + P LT+K+RTGW EK+PTAH LVP++Q ++ V A+ +HGRSR QRYTK ADW+Y+ + + +Q LP +P +G GD+LS+ + + H + G LE C ML RGALIKPWLPTEIKE+RHWDISA+ERLD+LK+F +GLEHWGSDQ+GVN TRR+LLEW SFL RY+PVGLLE L P +NDRP PY GR+DLE+LMAS DW+K+SEMLLGPV F+FVPKH+AN++ Sbjct: 90 DVEEDPADLLCRPVAAGEGCQFGDSCKFSHDVDDYMKRKPKDLGERCPVFDVVGYCRYGMACRFAKAHIEKVDGIYRNVKRDDYVEGNDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEMEPAAESPLLA----ERKPVDFKQKIYVAPLTTVGNLPFRRLLKQTGADITCGEMAMATNLLKAQQSEWALLRRHKSEDVFGVQIAGSFSDQMARVCELLARE-TEIDFVDINMGCPIDVVCRVGAGSALMNRPPRLLEVVSGALTGLELGTRMRTGGTV----NTPGLTVKLRTGWSEKQPTAHKLVPKLQAVRASQAYVNAAVVTADFKLRATQSVDAIMVHGRSRLQRYTKNADWDYIFQCSDAQIDLIDEKPLPHVPFVGGGDVLSHEEFDEHLQN--GKLETC-MLARGALIKPWLPTEIKERRHWDISASERLDLLKDFCRFGLEHWGSDQKGVNRTRRYLLEWQSFLCRYIPVGLLEAL--PQRINDRPSPYYGRNDLETLMASDQAVDWVKISEMLLGPVQDGFQFVPKHRANAY 665
BLAST of NO07G04210 vs. NCBI_GenBank
Match: OQR97662.1 (tRNA-dihydrouridine synthase 3 [Achlya hypogyna]) HSP 1 Score: 481.9 bits (1239), Expect = 3.200e-132 Identity = 268/571 (46.94%), Postives = 343/571 (60.07%), Query Frame = 0 Query: 123 RPRDDVHADKEEGLCRSFLE-KRCTYGDGCKFSHDTIGYLARKPADLGPVCPVFSTYGECPSGVTCRFGGTHIDKGRGVSIIMAKAGGK----XXXXXXXXXXXXXXXXXXXXXXAPAKEEGTEEEA---IEYNLAGYPAREG-KPVDWNGKVYVAPLTTVGNLPFRRVMKDLGADITCGEMALANNLLGGQKSETALLRRHPCEDVFGIQLAGAHPDMMTRTTELLVREGIKADFIDLNLGCPLDL-------------VNNQGMGAALMGRANKLRSILSGMSTVLRKYHPPEGGATYVRLSSCPPLTIKMRTGWDEKKPTAHHLVPQIQEWAAAGE---------------CDVGAVFIHGRSRQQRYTKKADWNYLQRVASSQNTSLPLLPVIGNGDILSYTDHEAHKASYTGSLEPCAML--------------GRGALIKPWLPTEIKEQRHWDISANERLDILKNFVAYGLEHWGSDQRGVNTTRRFLLEWLSFLHRYVPVGLLEHLNQPLSMNDRPVPYRGRSDLESLMASPYDQDWIKLSEMLLGPVPASFKFVPKHKANSW 643 RPRD D LCR + C +GD CKFSHD Y+ R+P D CPV++ G C G+ CR+G +H+D G + A K A +++G + + +EY++ P KPVD+ GK++V PLTTVGNLPFRRV+K GADIT GEMA+A NLL GQ SE ALLRRH EDVFG+Q+AGA+ D + R EL+ R+ DFID+N+GCP+DL + G GAALM RA KL S++SG T + E G+ + L+S P LT+KMR GW EK P AH L+P++Q ++ E V A+ IHGRSR QRYTK ADW Y+ + ++ + +IG GD+LSY + H S G ++ C + G GALIKPWLPTEIKE+RH+DISA+ERLDILK+FV GLEHWGSDQ+G+N TRR+LLEW SFL RYVPVG+LE L P +NDRP+PY GR+DLE+LMAS DW+K+SEMLLGPVP F+FVPKHKAN++ Sbjct: 71 RPRDAAE-DPSTMLCRGVAAGEGCAFGDSCKFSHDVADYMKRRPKDFEGPCPVYTALGYCRYGLNCRYGLSHVD-ASGTKNLGTPADEKSVEVNDLDTATRDMLRKNKYPFRSVPASHQKKGKKPKTARDVEYDVLDNPEPAAHKPVDFKGKIFVGPLTTVGNLPFRRVLKHWGADITIGEMAMATNLLQGQASEWALLRRHESEDVFGVQIAGAYGDQIARVCELITRK-TSVDFIDINMGCPIDLGERALSLHSLTPAMCKSGAGAALMNRAPKLCSVVSGALTGI------ELGS--LGLASRPSLTVKMRAGWSEKTPIAHKLLPKVQSTVSSAEFMNQSVVLNYALKTNVHVDALTIHGRSRLQRYTKNADWVYVAECSDARGED-KSMQMIGGGDVLSYEEFHEHLKS--GQIDTCMLARFGYAVCEHIPHGRGSGALIKPWLPTEIKERRHYDISASERLDILKDFVKCGLEHWGSDQKGINRTRRYLLEWQSFLCRYVPVGILEKL--PQRINDRPMPYYGRNDLETLMASDQATDWVKISEMLLGPVPEGFQFVPKHKANAY 625
BLAST of NO07G04210 vs. NCBI_GenBank
Match: CCA23213.1 (tRNAdihydrouridine synthase 3 putative [Albugo laibachii Nc14]) HSP 1 Score: 481.1 bits (1237), Expect = 5.400e-132 Identity = 260/572 (45.45%), Postives = 343/572 (59.97%), Query Frame = 0 Query: 123 RPRDDVHADKEEGLCRSF-LEKRCTYGDGCKFSHDTIGYLARKPADLGPVCPVFSTYGECPSGVTCRFGGTHIDKGRGVSIIMAK------------------------------AGGKXXXXXXXXXXXXXXXXXXXXXXAPAK-EEGTEEEAIEYNLAGYP-AREGKPVDWNGKVYVAPLTTVGNLPFRRVMKDLGADITCGEMALANNLLGGQKSETALLRRHPCEDVFGIQLAGAHPDMMTRTTELLVREGIKADFIDLNLGCPLDLVNNQGMGAALMGRANKLRSILSGMSTVLR--KYHPPEGGATYVRLSS--CPPLTIKMRTGWDEKKPTAHHLVPQI--------------QEWAAAGEC-DVGAVFIHGRSRQQRYTKKADWNYLQRVASSQNTSLPLLPVIGNGDILSYTDHEAHKASYTGSLEPCAMLGRGALIKPWLPTEIKEQRHWDISANERLDILKNFVAYGLEHWGSDQRGVNTTRRFLLEWLSFLHRYVPVGLLEHLNQPLSMNDRPVPYRGRSDLESLMASPYDQDWIKLSEMLLGPVPASFKFVPKHKANSW 643 RP D V D + LCR + K C YG+ CKFSH+ ++ RKP D+ P CP+F ++GEC G+ CRF H+ S +A+ + +P K T + +A P E K +D++ K+YVAPLTTVGNLPFRR++K GADITCGEMA+++N+L Q+SE ALLRRH EDVFG+Q+AGAH D M R ELL RE DFID+N+GCP+D+V G G+ALM R +L ++SG T ++ + H + S+ P L++K+RTGW EK+P+AH +V +I W + V A+ IHGRSR QRYTK+ADW+Y+ R A + + + IG GD+LS+ + + H + G L+ C M+ RGALIKPWLP EIKE+RH+DISA+ER D+LK+FV +GLEHWG+DQ+GVN TRR+LLEW SFL RY+PVG+LE L P +NDRP PY GR+DLE+LMAS DWIKLSE+LLG VP FKFVPKHKAN++ Sbjct: 52 RPIDQVE-DPSDVLCRFLAVSKPCEYGERCKFSHEIKDFMKRKPKDIHPYCPIFESFGECEYGLKCRFASVHVANTTQSSDSVAENVTEXXXXXXXXXXXXXXXXXXXHLSAELCESLRKNRYCFGCIQRKDKRKPKTDSRSPGKLHPDTNPILSDEEVAPSPLLSERKQIDFHRKIYVAPLTTVGNLPFRRLLKQTGADITCGEMAMSSNILQAQRSEWALLRRHKSEDVFGVQIAGAHGDQMARVCELLTRE-TDVDFIDINMGCPIDIVCKSGSGSALMTRPARLLEVISGALTGIQIGQQHRLQSRKIVANSSAFCYPALSVKLRTGWSEKQPSAHKVVSKIISTRSSHTYVSMNTAHWCKLDDSQSVRAIAIHGRSRLQRYTKEADWDYIYRCADTSSDIVSGTSFIGGGDVLSFVEFDEHLKN--GKLDTC-MVARGALIKPWLPIEIKERRHFDISASERFDLLKDFVKFGLEHWGTDQKGVNRTRRYLLEWQSFLCRYIPVGILEQL--PQRINDRPAPYYGRNDLETLMASDQAVDWIKLSELLLGSVPEEFKFVPKHKANAF 616
BLAST of NO07G04210 vs. NCBI_GenBank
Match: CCI10295.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 481.1 bits (1237), Expect = 5.400e-132 Identity = 258/571 (45.18%), Postives = 341/571 (59.72%), Query Frame = 0 Query: 123 RPRDDVHADKEEGLCRSF-LEKRCTYGDGCKFSHDTIGYLARKPADLGPVCPVFSTYGECPSGVTCRFGGTH-IDKGRGVSIIMAKAGG-----------------------------KXXXXXXXXXXXXXXXXXXXXXXAPAKEEGTEEEAIEYNLAGYP-AREGKPVDWNGKVYVAPLTTVGNLPFRRVMKDLGADITCGEMALANNLLGGQKSETALLRRHPCEDVFGIQLAGAHPDMMTRTTELLVREGIKADFIDLNLGCPLDLVNNQGMGAALMGRANKLRSILSGMSTVLR--KYHPPEGGATYVRLSS--CPPLTIKMRTGWDEKKPTAHHLVPQI--------------QEWAAAGEC-DVGAVFIHGRSRQQRYTKKADWNYLQRVASSQNTSLPLLPVIGNGDILSYTDHEAHKASYTGSLEPCAMLGRGALIKPWLPTEIKEQRHWDISANERLDILKNFVAYGLEHWGSDQRGVNTTRRFLLEWLSFLHRYVPVGLLEHLNQPLSMNDRPVPYRGRSDLESLMASPYDQDWIKLSEMLLGPVPASFKFVPKHKANSW 643 RP D V D LCR + + C YG+ CKFSH+ Y+ RKP D+ CP+F +GEC G+ CRF H ++KG +++ + +P + + + + P E K +D+ K+YVAPLTTVGNLPFRR++K GADITCGEMA+++N+L Q+SE ALLRRH EDVFG+Q+AG H D M R ELL RE DFID+N+GCP+DLV G G+ALM R +L ++SG T ++ + H + S+ CP L++K+RTGW EK+P+AH LV +I +W V A+ IHGRSR QRYTK+ADW+Y+ R A + + ++ IG GD+LS+ + + H + G L+ C M+ RGALIKPWLP EIKE+RH+DISA+ER D+LK+FV +GLEHWG+DQ+GVN TRR+LLEW SFL RYVPVG+LEHL P +NDRP PY GR+DLE+LMAS DWIKLSE+LLG VP F+F PKHKAN++ Sbjct: 368 RPIDQVE-DPSVVLCRFIAVNEPCQYGESCKFSHEISDYMKRKPKDIHSHCPLFDAFGECEYGLKCRFASAHTVNKGHASDVVIENVTEXXXXXXXXXXXXXXXXXXNQLSLDLRECLRKNKYRFGCIKRKDKRNQKSGSRSPKEADPDIKPPLPEEADPCPLIPERKKIDFKRKIYVAPLTTVGNLPFRRLLKQTGADITCGEMAMSSNILQAQQSEWALLRRHKSEDVFGVQIAGGHGDQMARVCELLTRE-TDIDFIDINMGCPIDLVCRAGSGSALMTRPARLLEVISGALTGIQIGQQHRLQSRKILASSSAFYCPALSVKLRTGWSEKQPSAHKLVSKISSTRSSMTFVDLDSSQWCKLDNSQSVRAIAIHGRSRLQRYTKEADWDYIYRCADACSDNVVDTSFIGGGDVLSFVEFDEHLKN--GKLDTC-MIARGALIKPWLPIEIKERRHFDISASERFDLLKDFVKFGLEHWGTDQKGVNRTRRYLLEWQSFLCRYVPVGILEHL--PQKINDRPAPYYGRNDLETLMASDQAVDWIKLSELLLGSVPDDFEFAPKHKANAF 931
BLAST of NO07G04210 vs. NCBI_GenBank
Match: XP_011995028.1 (PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like isoform X2 [Ovis aries musimon]) HSP 1 Score: 480.3 bits (1235), Expect = 9.200e-132 Identity = 267/572 (46.68%), Postives = 338/572 (59.09%), Query Frame = 0 Query: 129 HADKEEGLCRSFLEK---RCTYGDGCKFSHDTIGYLARKPADLGPVCPVFSTYGECPSGVTCRFGGTH----------------------IDKGRGVSIIMAKAGGKXXXXXXXXXXXXXXXXXXXXXXAPAKEEGTEEEAI-------------EYNLAGYPA-------------------REGKPVDWNGKVYVAPLTTVGNLPFRRVMKDLGADITCGEMALANNLLGGQKSETALLRRHPCEDVFGIQLAGAHPDMMTRTTELLVREGIKADFIDLNLGCPLDLVNNQGMGAALMGRANKLRSILSGMSTVLRKYHPPEGGATYVRLSSCPPLTIKMRTGWDEKKPTAHHLVPQIQEWAAAGECDVGAVFIHGRSRQQRYTKKADWNYLQRVASSQNTSLPLLPVIGNGDILSYTDHEAHKASYTGSLEPCAMLGRGALIKPWLPTEIKEQRHWDISANERLDILKNFVAYGLEHWGSDQRGVNTTRRFLLEWLSFLHRYVPVGLLEHLNQPLSMNDRPVPYRGRSDLESLMASPYDQDWIKLSEMLLGPVPASFKFVPKHKANSWE 644 H DK + LC S +++ +C YGD C+F HD YL KPADLGP C +F T+G CP GVTCRF G H +DK + K K P EG E E E + G P+ RE + +D +GK+Y+APLTT GNLPFRR+ K GAD+TCGEMA+ NLL GQ SE ALL+RHPCED+FG+QL GA PD MT+ ELL R I+ DF+D+N+GCP+DLV +G G ALM R K + I+ GM+ VL PLT+K+RTG E+ AH L+P +++W AA V +HGRSR+QRYTK ADW Y+++ ++ + +P+ GNGDILSY D A++A TG M+ RGAL+KPWL TEIKEQRHWDIS++ERLDIL++F YGLEHWGSD +GV TRRFLLEWLSFL RYVP+GLLE L P +N+RP Y GR+ LE+LMAS DWI++SEMLLGPVP +F F+PKHKAN+++ Sbjct: 117 HYDKNK-LCPSLVQESAAKCFYGDRCRFLHDVGHYLETKPADLGPSCVLFETFGRCPYGVTCRFAGAHLGPEGQNLVREGLVQAPPVRNGLDKALQQQLRKRKIHFKHAEQALRQLSRGPLPGPTPEATVP---EGREAEGAPGQDNCDSQLAPQEPDTVGPPSGPLRTFGPLTDEDVVRLRPREKRRLDISGKLYLAPLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQGQTSEWALLKRHPCEDIFGVQLEGAFPDTMTKCAELLNRT-IEVDFVDINVGCPIDLVFKKGGGCALMNRLAKFQQIVRGMNQVLD-----------------VPLTVKLRTGVQERVNLAHRLLPDLRDWGAA------LVTLHGRSREQRYTKLADWQYIEQCVAAASP----MPLFGNGDILSYED--ANRALQTGVAG--VMIARGALLKPWLFTEIKEQRHWDISSSERLDILRDFTHYGLEHWGSDTQGVEKTRRFLLEWLSFLCRYVPLGLLERL--PQRINERPPYYLGRNYLETLMASQKAADWIRISEMLLGPVPPNFVFLPKHKANAYK 650 The following BLAST results are available for this feature:
BLAST of NO07G04210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G04210 ID=NO07G04210|Name=NO07G04210|organism=Nannochloropsis oceanica|type=gene|length=4411bpback to top protein sequence of NO07G04210.1 >NO07G04210.1-protein ID=NO07G04210.1-protein|Name=NO07G04210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=648bpback to top Synonyms
Publications
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