NO07G04210, NO07G04210 (gene) Nannochloropsis oceanica

Overview
NameNO07G04210
Unique NameNO07G04210
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4411
Alignment locationchr7:1176313..1180723 -

Link to JBrowse

Properties
Property NameValue
DescriptiontRNA-dihydrouridine(47) synthase [NAD(P)( )]-like
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:1176313..1180723 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0050660flavin adenine dinucleotide binding
GO:0017150tRNA dihydrouridine synthase activity
GO:0046872metal ion binding
GO:0050660flavin adenine dinucleotide binding
GO:0046872metal ion binding
GO:0017150tRNA dihydrouridine synthase activity
GO:0016491oxidoreductase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0008033tRNA processing
GO:0055114oxidation-reduction process
GO:0055114oxidation-reduction process
GO:0008033tRNA processing
GO:0002943tRNA dihydrouridine synthesis
Vocabulary: INTERPRO
TermDefinition
IPR001269tRNA_hU_synthase
IPR000571Znf_CCCH
Homology
[Close]
BLAST of NO07G04210 vs. NCBI_GenBank
Match: XP_002181140.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC47063.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 521.5 bits (1342), Expect = 3.600e-144
Identity = 281/562 (50.00%), Postives = 346/562 (61.57%), Query Frame = 0 
Query:  123 RPRDDVHADKEEGLCRSFLE-KRCTYGDGCKFSHDTIGYLARKPAD-----LGPVCPVFSTYGECPSGVTCRFGGTHIDKGRGVSIIMAKAG------------------GKXXXXXXXXXXXXXXXXXXXXXXAPAKEEGTEEEAIE---------------YNLAGYPAREGKPVDWNGKVYVAPLTTVGNLPFRRVMKDLGADITCGEMALANNLLGGQKSETALLRRHPCEDVFGIQLAGAHPDMMTRTTELLVREGIKADFIDLNLGCPLDLVNNQGMGAALMGRANKLRSILSGMSTVLRKYHPPEGGATYVRLSSCPPLTIKMRTGWDEKKPTAHHLVPQIQEWAAAGECDVGAVFIHGRSRQQRYTKKADWNYLQRVASSQNTSLPLLPVIGNGDILSYTDHEAHKASYTGSLEPCAMLGRGALIKPWLPTEIKEQRHWDISANERLDILKNFVAYGLEHWGSDQRGVNTTRRFLLEWLSFLHRYVPVGLLEHLNQPLSMNDRPVPY-RGRSDLESLMASPYDQDWIKLSEMLLGPVPASFKFVPKHKANSWEN 645
            RPR D   D    +C + +  + C YGDGC+FSHD   ++A +P D     LG VCP    YG C  G  CR G +HI+   G +I     G                   K                      AP   E   ++A+E                +++  P R  K +D++ KVYVAPLTTVGNLPFRR+MK  GADITCGEMA+A NLL GQ SE ALL+RHP ED+FG+Q+A  +PD+  RT EL+  E +  DF+DLNLGCPLD+V N+G GAALM R  +LRS + G+   L                +C P++IKMRTGW+  KP AH+LV +IQ W   G   + AV IHGRSR QRY K+ADW+Y+  VA SQ+ SL  +PVIGNGDI SY D E  K +  G +  CAML RGALIKPWLPTEIKE+RHWDISA+ERLDILK+F  +G+EHWG+DQ+G+N  RRFLLEWLSFLHRY PVGLLE L  P  MN RP  Y  GRSDLE+L+ SP   DWIK+SEMLLGPVP  F+F PKHKA  +++
Sbjct:    8 RPR-DARIDSAAKVCLAIIRGESCPYGDGCRFSHDMKEFMASRPEDINNKILGSVCPYIELYGYCVYGAMCRLGASHINMSTGENIRKDIDGPKPKPILNTLPKEVQIQLRKKSYPFKHQRYNERGGKNSRETTAPKDTEKVTDDALEPPSNTSAEEGRASSSIDMSPLPDRTRKLIDFSKKVYVAPLTTVGNLPFRRIMKKFGADITCGEMAVATNLLSGQSSEWALLKRHPEEDIFGVQIAAGYPDVFARTCELIENE-MNVDFVDLNLGCPLDIVCNKGSGAALMMRDKRLRSSVEGILETL----------------TC-PISIKMRTGWEMTKPFAHNLVQKIQSWGLDG---ISAVMIHGRSRLQRYAKEADWDYISMVAKSQDMSLTTIPVIGNGDIFSYQDFE-EKIAREG-VNSCAMLARGALIKPWLPTEIKERRHWDISASERLDILKDFARFGMEHWGTDQQGINNCRRFLLEWLSFLHRYCPVGLLEVL--PQHMNQRPPAYICGRSDLETLLLSPDSSDWIKISEMLLGPVPDGFRFEPKHKAKGFKS 543
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BLAST of NO07G04210 vs. NCBI_GenBank
Match: GAX23586.1 (tRNA-dihydrouridine synthase 3 [Fistulifera solaris])

HSP 1 Score: 520.4 bits (1339), Expect = 8.000e-144
Identity = 265/520 (50.96%), Postives = 338/520 (65.00%), Query Frame = 0 
Query:  145 CTYGDGCKFSHDTIGYLARKPADLGPV---CPVFSTYGECPSGVTCRFGGTHIDKGRGVSI-------------------IMAKAGGKXXXXXXXXXXXXXXXXXXXXXXAPAKEEGTEEEAIEYNLAGYPAREGKPVDWNGKVYVAPLTTVGNLPFRRVMKDLGADITCGEMALANNLLGGQKSETALLRRHPCEDVFGIQLAGAHPDMMTRTTELLVREGIKADFIDLNLGCPLDLVNNQGMGAALMGRANKLRSILSGMSTVLRKYHPPEGGATYVRLSSCPPLTIKMRTGWDEKKPTAHHLVPQIQEWAAAGECDVGAVFIHGRSRQQRYTKKADWNYLQRVASSQNTSLPLLPVIGNGDILSYTDHEAHKASYTGSLEPCAMLGRGALIKPWLPTEIKEQRHWDISANERLDILKNFVAYGLEHWGSDQRGVNTTRRFLLEWLSFLHRYVPVGLLEHLNQPLSMNDRPVPYR-GRSDLESLMASPYDQDWIKLSEMLLGPVPASFKFVPKHKANS 642
            CT+GD CKFSHD   +LA +P D+  +   CP ++ YG C  G TCR GG+H++   G ++                   + ++                          AP + E +E   +  ++   P +  + +D++ KVY+APLTTVGNLPFRRVMK LGADITCGEMA+A+++L G  SE ALL+RH  ED+FG+QLA  H D+ TR  E L+    K DF+DLNLGCPLD++N++G GAALM R NK++  + G++  +                SC P+TIKMRTGWD  KP AH LV +IQ W   G   VGAV IHGRSR QRY+K+ADW+Y+ + A +Q+ SLP +PVIGNGDI SY D+E  +++    +  CAMLGRGALIKPWLPTEIKE+R WDISA ERLDILK+FV +GLEHWGSDQ+GV+  RRFLLEWLSFLHRYVP+GLLE  +Q  SMN R  P+  GRSDLE+L  S    DWI++SEMLLGPVP  F F PKH+A S
Sbjct: 1520 CTHGDSCKFSHDIKAFLASRPPDIDQIEGGCPHYNLYGFCMYGATCRLGGSHLNLATGENLRKEGIVDASTRVLNLLDRDVQSQLRRNDYPFVCQKFNQKKKDDAHENRSAPEENESSE---VLPDMTPLPEKSRRTIDFSNKVYIAPLTTVGNLPFRRVMKKLGADITCGEMAVASHILMGNASEWALLKRHVDEDIFGVQLAAGHADLFTRACE-LIENHTKVDFVDLNLGCPLDIINDKGAGAALMLRQNKIKDTIKGITQTI----------------SC-PVTIKMRTGWDMAKPFAHELVAKIQNWGMGG---VGAVMIHGRSRLQRYSKEADWDYISKAALNQDNSLPKIPVIGNGDIFSYKDYE--ESTSREGISSCAMLGRGALIKPWLPTEIKEKRQWDISATERLDILKDFVRFGLEHWGSDQKGVDNCRRFLLEWLSFLHRYVPIGLLETASQ--SMNQRVPPFMCGRSDLETLFLSSEASDWIRISEMLLGPVPEGFHFQPKHQAKS 2011
[Close]
BLAST of NO07G04210 vs. NCBI_GenBank
Match: OQS07990.1 (tRNA-dihydrouridine synthase 3 [Thraustotheca clavata])

HSP 1 Score: 511.9 bits (1317), Expect = 2.900e-141
Identity = 275/550 (50.00%), Postives = 350/550 (63.64%), Query Frame = 0 
Query:  123 RPRDDVHADKEEGLCRSFLE-KRCTYGDGCKFSHDTIGYLARKPADLGPVCPVFSTYGECPSGVTCRFGGTHIDKGRGVSIIMAKAGGK------XXXXXXXXXXXXXXXXXXXXXXAPAKEEGTEEEA--IEYNLAGYP-AREGKPVDWNGKVYVAPLTTVGNLPFRRVMKDLGADITCGEMALANNLLGGQKSETALLRRHPCEDVFGIQLAGAHPDMMTRTTELLVREGIKADFIDLNLGCPLDLVNNQGMGAALMGRANKLRSILSGMSTVLRKYHPPEGGATYVRLSSCPPLTIKMRTGWDEKKPTAHHLVPQIQ---------------EWAAAGECDVGAVFIHGRSRQQRYTKKADWNYLQRVASSQNTSLPLLPVIGNGDILSYTDHEAHKASYTGSLEPCAMLGRGALIKPWLPTEIKEQRHWDISANERLDILKNFVAYGLEHWGSDQRGVNTTRRFLLEWLSFLHRYVPVGLLEHLNQPLSMNDRPVPYRGRSDLESLMASPYDQDWIKLSEMLLGPVPASFKFVPKHKANSWENANG 648
            RPRD    D    LCR     + C YGD C+FSHD   +L R+P DLG  CPV++  G C  G+ CR+G +H+D+    ++ + K   +                            +  K+ G  ++   I++ +   P   E KPVD+ GK+Y+APLTTVGNLPFRRV+K  GADITCGEMA+A NLL GQ SE ALLRRH  EDVFG+Q+AGA  D + R  EL+ R+    DFID+N+GCP+DLV   G GAALM R  KL S++SG  T +      E G+    LS+ P LT+KMR GW EK P AH+L+P++Q                +A   +  V A+ IHGRSR QRYTK ADW Y+   A+++      L +IG GD+LSY +   H  S  G ++ C ML RGALIKPWLPTEIKE+RH+DISA+ERLDILK+FV  GLEHWGSDQ+G+N TRR+LLEW SFL RYVPVG+LE L  P  +NDRP+PY GR+DLE+LMAS    DWIK+SEMLLGPVP  F+F+PKHKAN+++   G
Sbjct:  393 RPRDPAE-DPANLLCRGIAAGEGCVYGDSCRFSHDVEDFLKRRPKDLGDSCPVYTAVGYCRYGLNCRYGMSHVDEN---NVNLGKPADEKCVEKNELNMPTRELLRKNTFPFRVVPESHRKKGGKSKKVRHIDHEIVENPIVPEHKPVDFKGKIYIAPLTTVGNLPFRRVLKHWGADITCGEMAMATNLLQGQVSEWALLRRHESEDVFGVQIAGAFGDQVARVCELITRK-TSVDFIDINMGCPIDLVCKAGAGAALMNRPPKLNSVISGALTGI------ELGS--FGLSTRPGLTVKMRAGWSEKNPVAHNLLPKVQTATSSSEFMNQSVVLNYAMRTDIRVDAMTIHGRSRLQRYTKNADWVYVAECANARGED-KSLQMIGGGDVLSYEEFHEHLKS--GHIDTC-MLARGALIKPWLPTEIKERRHFDISASERLDILKDFVKCGLEHWGSDQKGINRTRRYLLEWQSFLCRYVPVGILEKL--PQRINDRPMPYYGRNDLETLMASDQASDWIKISEMLLGPVPEGFQFMPKHKANAYDKVAG 923
[Close]
BLAST of NO07G04210 vs. NCBI_GenBank
Match: XP_012203227.1 (hypothetical protein SPRG_08593 [Saprolegnia parasitica CBS 223.65] >KDO25938.1 hypothetical protein SPRG_08593 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 510.4 bits (1313), Expect = 8.300e-141
Identity = 271/523 (51.82%), Postives = 343/523 (65.58%), Query Frame = 0 
Query:  123 RPRDDVHADKEEGLCRSFLE-KRCTYGDGCKFSHDTIGYLARKPADLGPVCPVFSTYGECPSGVTCRFGGTHIDKGRGVSIIMAKAGGKXXXXXXXXXXXXXXXXXXXXXXAPAKEEGTEEEA-IEYNLAGYP-AREGKPVDWNGKVYVAPLTTVGNLPFRRVMKDLGADITCGEMALANNLLGGQKSETALLRRHPCEDVFGIQLAGAHPDMMTRTTELLVREGIKADFIDLNLGCPLDLVNNQGMGAALMGRANKLRSILSGMSTVLRKYHPPEGGATYVRLSSCPPLTIKMRTGWDEKKPTAHHLVPQIQEWAAAGECDVGAVFIHGRSRQQRYTKKADWNYLQRVASSQNTSLPLLPVIGNGDILSYTDHEAHKASYTGSLEPCAMLGRGALIKPWLPTEIKEQRHWDISANERLDILKNFVAYGLEHWGSDQRGVNTTRRFLLEWLSFLHRYVPVGLLEHLNQPLSMNDRPVPYRGRSDLESLMASPYDQDWIKLSEMLLGPVPASFKFVPKHKANSW 643
            RPRD    D    LCR+    + C Y D CKFSHD   Y+ R+P D    CPV++  G C  G+ CR+G TH+D   GV++                               PA E+  ++E  IEY++   P   E KPVD+ GK+YV PLTTVGNLPFRRV+K  GADIT GEMA+A NLL GQ SE ALLRRH  EDVFG+Q+AGA+ D M R  EL+ R+  K DFID+N+GCP+DLV   G GAALM R  KL S+++G  T +      E G+    L++ P LT+KMR GW EK P AH L+P++Q   ++ E  +    IHGRSR QRYTK ADW Y+   A ++      + ++G GD+LSY   E H+   +G ++ C ML RGALIKPWLPTEIKE+RH+DIS++ERLDILK+FV  GLEHWGSD +G+N TRR+LLEW+SFL RYVPVG+LE L  P  +NDRP+PY GR+DLE+LMAS    DW+K+SEMLLGPVP  F+FVPKHKAN++
Sbjct:   95 RPRDAAD-DPSTMLCRAVAAGEGCAYSDSCKFSHDVADYMKRRPKDFEGPCPVYTALGYCRYGLNCRYGLTHVD-ANGVNL-----------------------------GTPADEKTAKQERNIEYDILDNPEPAEHKPVDFKGKIYVGPLTTVGNLPFRRVLKHWGADITIGEMAMATNLLQGQASEWALLRRHESEDVFGVQIAGAYGDQMARVCELITRK-TKVDFIDINMGCPIDLVCKAGGGAALMNRPPKLYSVIAGALTGI------ELGS--FGLATRPSLTVKMRAGWSEKTPVAHKLLPKVQTSISSNEF-MNQSVIHGRSRLQRYTKNADWVYVAECADTRGDD-KTMQMVGGGDVLSY--EEFHEHLQSGQIDTC-MLARGALIKPWLPTEIKERRHYDISSSERLDILKDFVKCGLEHWGSDAKGINRTRRYLLEWMSFLCRYVPVGILEKL--PQRINDRPMPYYGRNDLETLMASDQAADWVKISEMLLGPVPEGFQFVPKHKANAY 570
[Close]
BLAST of NO07G04210 vs. NCBI_GenBank
Match: XP_008614920.1 (hypothetical protein SDRG_10695 [Saprolegnia diclina VS20] >EQC31521.1 hypothetical protein SDRG_10695 [Saprolegnia diclina VS20])

HSP 1 Score: 506.5 bits (1303), Expect = 1.200e-139
Identity = 274/543 (50.46%), Postives = 345/543 (63.54%), Query Frame = 0 
Query:  123 RPRDDVHADKEEGLCRSFLE-KRCTYGDGCKFSHDTIGYLARKPADLGPVCPVFSTYGECPSGVTCRFGGTHIDKGRGVSI---IMAKAGGKXXXXXXXXXXXXXXXXXXXXXXAPAKEEG---TEEEAIEYNLAGYP-AREGKPVDWNGKVYVAPLTTVGNLPFRRVMKDLGADITCGEMALANNLLGGQKSETALLRRHPCEDVFGIQLAGAHPDMMTRTTELLVREGIKADFIDLNLGCPLDLVNNQGMGAALMGRANKLRSILSGMSTVLRKYHPPEGGATYVRLSSCPPLTIKMRTGWDEKKPTAHHLVPQIQ---------------EWAAAGECDVGAVFIHGRSRQQRYTKKADWNYLQRVASSQNTSLPLLPVIGNGDILSYTDHEAHKASYTGSLEPCAMLGRGALIKPWLPTEIKEQRHWDISANERLDILKNFVAYGLEHWGSDQRGVNTTRRFLLEWLSFLHRYVPVGLLEHLNQPLSMNDRPVPYRGRSDLESLMASPYDQDWIKLSEMLLGPVPASFKFVPKHKANSW 643
            RPRD    D    LCR+    + C Y D CKFSHD   Y+ R+P D    CPV++  G C  G+ CR+G TH+D   GV++      K                          A  +++G    +E  IEY++   P   E KPVD+ GK+YV PLTTVGNLPFRRV+K  GADIT GEMA+A NLL GQ SE ALLRRH  EDVFG+Q+AGA+ D M R  EL+ R+  K DFID+N+GCP+DLV   G GAALM R  KL S++SG  T +      E G+    L + P LT+KMR GW EK P AH L+P++Q                +A   +  V A+ +HGRSR QRYTK ADW Y+   A ++      + ++G GD+LSY +   H AS  G ++ C ML RGALIKPWLPTEIKE+RH+DIS++ERLDILK+FV  GLEHWGSD +G+N TRR+LLEW+SFL RYVPVG+LE L  P  +NDRP+PY GR+DLE+LMAS    DW+K+SEMLLGPVP  F+FVPKHKAN++
Sbjct:   76 RPRDAAD-DPSTMLCRAVAAGEGCAYSDSCKFSHDVADYMKRRPKDFEGPCPVYTALGYCRYGLNCRYGLTHVD-ANGVNLGTPADEKTVEINELDTATRDQLRKNKYPFRTTAASHQKKGGKAKQERNIEYDVLDNPEPAEHKPVDFKGKIYVGPLTTVGNLPFRRVLKHWGADITIGEMAMATNLLQGQASEWALLRRHESEDVFGVQIAGAYGDQMARVCELITRK-TKVDFIDINMGCPIDLVCKAGGGAALMNRPPKLYSVISGALTGM------ELGS--FGLPTRPSLTVKMRAGWSEKTPIAHKLLPKVQTSISSNEFMNQSVVLNYALKTDVHVNALTVHGRSRLQRYTKNADWVYVAECADTRGDD-KAMQMVGGGDVLSYEEFHEHLAS--GQIDTC-MLARGALIKPWLPTEIKERRHYDISSSERLDILKDFVKCGLEHWGSDAKGINRTRRYLLEWMSFLCRYVPVGILEQL--PQRINDRPMPYYGRNDLETLMASDQAADWVKISEMLLGPVPEGFQFVPKHKANAY 601
[Close]
BLAST of NO07G04210 vs. NCBI_GenBank
Match: XP_008867229.1 (hypothetical protein H310_04596 [Aphanomyces invadans] >ETW04273.1 hypothetical protein H310_04596 [Aphanomyces invadans])

HSP 1 Score: 505.8 bits (1301), Expect = 2.100e-139
Identity = 268/542 (49.45%), Postives = 344/542 (63.47%), Query Frame = 0 
Query:  123 RPRDDVHADKEEGLCRSFLE-KRCTYGDGCKFSHDTIGYLARKPADLGPVCPVFSTYGECPSGVTCRFGGTHIDKGR---GVSIIMAKAGGKXXXXXXXXXXXXXXXXXXXXXXAPAKEEGTEEEAIEYNL---AGYPAREGKPVDWNGKVYVAPLTTVGNLPFRRVMKDLGADITCGEMALANNLLGGQKSETALLRRHPCEDVFGIQLAGAHPDMMTRTTELLVREGIKADFIDLNLGCPLDLVNNQGMGAALMGRANKLRSILSGMSTVLRKYHPPEGGATYVRLSSCPPLTIKMRTGWDEKKPTAHHLVPQIQ---------------EWAAAGECDVGAVFIHGRSRQQRYTKKADWNYLQRVASSQNTSLPLLPVIGNGDILSYTDHEAHKASYTGSLEPCAMLGRGALIKPWLPTEIKEQRHWDISANERLDILKNFVAYGLEHWGSDQRGVNTTRRFLLEWLSFLHRYVPVGLLEHLNQPLSMNDRPVPYRGRSDLESLMASPYDQDWIKLSEMLLGPVPASFKFVPKHKANSW 643
            RPRD    D    LCR     + C++ D CKFSHD   +L R+P DLG  CPVF+  G C  G+ CR+G +H+D      G    +                               K+ GT +++ ++ +         + KPVD+ GKVY+ PLTTVGNLPFRRV+K  GADITCGEMA+  NLL GQ+SE ALLRRH  EDVFG+Q+AGA+ D   R  EL+ RE    DFID+N+GCP+DLV   G GAALM R  KL  +++G  + +      E G+    LS+ P LT+KMRTGW +K+P AH LVP++Q                +A   +  V A+ IHGRSR QRY+K ADW Y++  A++++     + +IG GD+LSY +   H AS  G L+ C ML RGALIKPWLPTEIKE+RH+DISA+ERLD+LK+FV +GLEHWGSDQ+G+N TRR+LLEW SFL RY+PVG+LE L  P  +N+RP  Y GR+DLE+LMAS    DWIK+SEMLLGPVP  F+FVPKHKANS+
Sbjct:   87 RPRDPTD-DPSTMLCRGVAAGEGCSFEDKCKFSHDVADFLKRRPKDLGDTCPVFTANGYCRYGLNCRYGLSHVDANNVNLGTPADLKATEVNDLSMENRDLLRKSTYPFRAVASTYKKKGGTAKKSRDFTIDPVDNPKVPDHKPVDFKGKVYIGPLTTVGNLPFRRVLKQWGADITCGEMAMTTNLLQGQQSEWALLRRHESEDVFGVQIAGAYGDQTARVCELITRE-TSVDFIDINMGCPIDLVCKAGAGAALMNRTPKLCEVVTGALSGI------EAGS--FGLSTRPGLTVKMRTGWSDKQPLAHKLVPKVQSLRSSAEFMNQSVVLNYAMRTDVHVDALTIHGRSRLQRYSKSADWVYVEECANARDAGEHRMALIGGGDVLSYEEFHEHLAS--GVLDTC-MLARGALIKPWLPTEIKERRHFDISASERLDLLKDFVKFGLEHWGSDQKGINRTRRYLLEWQSFLCRYIPVGILEKL--PQRINERPGLYYGRNDLETLMASDQAVDWIKISEMLLGPVPDGFQFVPKHKANSY 613
[Close]
BLAST of NO07G04210 vs. NCBI_GenBank
Match: XP_002907473.1 (tRNA-dihydrouridine synthase 3 [Phytophthora infestans T30-4] >EEY64037.1 tRNA-dihydrouridine synthase 3 [Phytophthora infestans T30-4])

HSP 1 Score: 495.4 bits (1274), Expect = 2.800e-136
Identity = 275/604 (45.53%), Postives = 347/604 (57.45%), Query Frame = 0 
Query:  127 DVHADKEEGLCRSFLE-KRCTYGDGCKFSHDTIGYLARKPADLGPVCPVFSTYGECPSGVTCRFGGTHIDKGRGVSIIMAKAG---------------------------------------------------------------GKXXXXXXXXXXXXXXXXXXXXXXAPAKEEGTEEEAIEYNLAGYPAREGKPVDWNGKVYVAPLTTVGNLPFRRVMKDLGADITCGEMALANNLLGGQKSETALLRRHPCEDVFGIQLAGAHPDMMTRTTELLVREGIKADFIDLNLGCPLDLVNNQGMGAALMGRANKLRSILSGMSTVLRKYHPPEGGATYVRLSSCPPLTIKMRTGWDEKKPTAHHLVPQIQ----------------EWAAAGECDVGAVFIHGRSRQQRYTKKADWNYLQRVASSQNTSL---PL--LPVIGNGDILSYTDHEAHKASYTGSLEPCAMLGRGALIKPWLPTEIKEQRHWDISANERLDILKNFVAYGLEHWGSDQRGVNTTRRFLLEWLSFLHRYVPVGLLEHLNQPLSMNDRPVPYRGRSDLESLMASPYDQDWIKLSEMLLGPVPASFKFVPKHKANSWENA 646
            D   D  + LCR     + C +GD CKFSHD   Y+ RKP DLG  CPVF   G C  G+ CRF  +HI+K   +   + + G                                                                 XXX                    P  E+   E A E  L      E KPVD+  K+Y+APLTTVGNLPFRR+MK  GADITCGEMA+A NLL  Q+SE ALLRRH  EDVFG+QLAG+  D MTR  ELL RE    DF+D+N+GCP+D+V   G G+ALM R  +L  ++SG  T L        G     + + P LT+K+RTGW EK+PTAH L+P++Q                ++       + A+ +HGRSR QRYTK ADW+Y+ + + +Q  S+   PL  +P +G GD+LSY + + H  +  G L+ C ML RGALIKPWLPTEIKE+RHWDISA+ERLD+LK+FV +GLEHWGSDQ+GVN TRR+LLEW SFL RY+PVG+LE L  P  +NDRP PY GRSDLE+LMAS    DW+K+SEMLLGPVP  F+FVPKH+AN+++ A
Sbjct:   92 DAEQDPADLLCRPVASGEGCKFGDSCKFSHDIDDYMKRKPKDLGERCPVFDAVGYCRYGMACRFAKSHIEKVDDIYRNLKREGYVETPGHDLGDEANDLTHDLRLKLRKDTYDFQSKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVESSEAAKANSVPEKVTPEPESEDAKMEPAAESPL----LPERKPVDFKRKIYIAPLTTVGNLPFRRLMKQTGADITCGEMAMATNLLKAQQSEWALLRRHKSEDVFGVQLAGSFSDQMTRVCELLTRE-TDIDFVDINMGCPIDIVCRAGAGSALMTRPPRLLEVVSGALTGLELGTRMRTGG----IVNTPGLTVKLRTGWSEKQPTAHKLIPKLQAVRASQAYVNSAVVTADFKLRATQSIDAITVHGRSRLQRYTKHADWDYIFQCSDAQKGSIDDKPLSNIPFVGGGDVLSYEEFDEHLQN--GKLDTC-MLARGALIKPWLPTEIKERRHWDISASERLDLLKDFVRFGLEHWGSDQKGVNRTRRYLLEWQSFLCRYIPVGVLETL--PQRINDRPSPYYGRSDLETLMASDQAVDWVKISEMLLGPVPDGFQFVPKHRANAYQTA 681
[Close]
BLAST of NO07G04210 vs. NCBI_GenBank
Match: ETK74588.1 (hypothetical protein L915_18618 [Phytophthora parasitica] >ETL28010.1 hypothetical protein L916_18522 [Phytophthora parasitica] >ETM34472.1 hypothetical protein L914_18435 [Phytophthora parasitica] >ETP04121.1 hypothetical protein F441_19008 [Phytophthora parasitica CJ01A1] >KUF67085.1 tRNA-dihydrouridine synthase 3 [Phytophthora nicotianae] >KUG02097.1 tRNA-dihydrouridine synthase 3 [Phytophthora nicotianae])

HSP 1 Score: 493.4 bits (1269), Expect = 1.100e-135
Identity = 289/596 (48.49%), Postives = 355/596 (59.56%), Query Frame = 0 
Query:  127 DVHADKEEGLCRSFLE-KRCTYGDGCKFSHDTIGYLARKPADLGPVCPVFSTYGECPSGVTCRFGGTHIDKGRGVSIIMAKAG-----------------------------GKXXXXXXXXXXXXXXXXXXXXXXAPAKEEGTEEEAIEYNLAGYPAR----------------------------EGKPVDWNGKVYVAPLTTVGNLPFRRVMKDLGADITCGEMALANNLLGGQKSETALLRRHPCEDVFGIQLAGAHPDMMTRTTELLVREGIKADFIDLNLGCPLDLVNNQGMGAALMGRANKLRSILSGMSTVLRKYHPPEGGATYVRLSSCPPLTIKMRTGWDEKKPTAHHLVPQIQ----------------EWAAAGECDVGAVFIHGRSRQQRYTKKADWNYLQRVASSQNTS-----LPLLPVIGNGDILSYTDHEAHKASYTGSLEPCAMLGRGALIKPWLPTEIKEQRHWDISANERLDILKNFVAYGLEHWGSDQRGVNTTRRFLLEWLSFLHRYVPVGLLEHLNQPLSMNDRPVPYRGRSDLESLMASPYDQDWIKLSEMLLGPVPASFKFVPKHKANSWE 644
            D   D  + LCR     + C +GD CKFSHD   Y+ RK  DLG  CPVF   G C  G+ CRF   H++K  G+   + + G                                  XXXXXXXXXXXXXXXXXX   AK E   E                                         E KPVD+  K+Y+APLTTVGNLPFRR+MK  GADITCGEMA+A NLL  Q+SE ALLRRH  EDVFG+Q+AG+  D MTR  ELL RE    DF+D+N+GCP+D+V   G G+ALM R  +L  ++SG  T L        G T     + P LT+K+RTGW EK+PTAH L+P++Q                ++       V A+ +HGRSR QRYTK ADW+Y+ +   +Q  S     LP +P +G GD+LSY + + H  +  G L+ C ML RGALIKPWLPTEIKE+RHWDISA+ERLD+LK+FV +GLEHWGSDQ+GVN TRR+LLEW SFL RY+PVGLLE L  P  +NDRP PY GRSDLESLMAS    DW+K+SEMLLGPVP  F+FVPKH+AN+++
Sbjct:   92 DAEQDPADLLCRPVASGESCQFGDSCKFSHDIDDYMKRKVKDLGERCPVFDAIGFCRYGMACRFAKAHVEKVDGIYRNLKREGYVETPGHDLGDEVNDLTHDLRLKLRKDTYDFQSKXXXXXXXXXXXXXXXXXXGKDAKAEVAPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPERKPVDFKRKIYIAPLTTVGNLPFRRLMKQTGADITCGEMAMATNLLKAQQSEWALLRRHKSEDVFGVQIAGSFSDQMTRVCELLARE-TDIDFVDINMGCPIDIVCRAGAGSALMTRPPRLLEVVSGALTGLELGTRMRTGGTV----NTPGLTVKLRTGWSEKQPTAHKLIPKLQGVRASMAYVNSAVVTADFKLRATQSVDAITVHGRSRLQRYTKHADWDYIFQCCDAQKDSIDDKPLPRVPFVGGGDVLSYEEFDEHLQN--GKLDTC-MLARGALIKPWLPTEIKERRHWDISASERLDLLKDFVRFGLEHWGSDQKGVNRTRRYLLEWQSFLCRYIPVGLLEAL--PQRINDRPSPYYGRSDLESLMASDQAVDWVKISEMLLGPVPDGFQFVPKHRANAYQ 677
[Close]
BLAST of NO07G04210 vs. NCBI_GenBank
Match: ETO62981.1 (hypothetical protein F444_19147 [Phytophthora parasitica P1976])

HSP 1 Score: 493.4 bits (1269), Expect = 1.100e-135
Identity = 289/596 (48.49%), Postives = 355/596 (59.56%), Query Frame = 0 
Query:  127 DVHADKEEGLCRSFLE-KRCTYGDGCKFSHDTIGYLARKPADLGPVCPVFSTYGECPSGVTCRFGGTHIDKGRGVSIIMAKAG-----------------------------GKXXXXXXXXXXXXXXXXXXXXXXAPAKEEGTEEEAIEYNLAGYPAR----------------------------EGKPVDWNGKVYVAPLTTVGNLPFRRVMKDLGADITCGEMALANNLLGGQKSETALLRRHPCEDVFGIQLAGAHPDMMTRTTELLVREGIKADFIDLNLGCPLDLVNNQGMGAALMGRANKLRSILSGMSTVLRKYHPPEGGATYVRLSSCPPLTIKMRTGWDEKKPTAHHLVPQIQ----------------EWAAAGECDVGAVFIHGRSRQQRYTKKADWNYLQRVASSQNTS-----LPLLPVIGNGDILSYTDHEAHKASYTGSLEPCAMLGRGALIKPWLPTEIKEQRHWDISANERLDILKNFVAYGLEHWGSDQRGVNTTRRFLLEWLSFLHRYVPVGLLEHLNQPLSMNDRPVPYRGRSDLESLMASPYDQDWIKLSEMLLGPVPASFKFVPKHKANSWE 644
            D   D  + LCR     + C +GD CKFSHD   Y+ RK  DLG  CPVF   G C  G+ CRF   H++K  G+   + + G                                  XXXXXXXXXXXXXXXXXX   AK E   E                                         E KPVD+  K+Y+APLTTVGNLPFRR+MK  GADITCGEMA+A NLL  Q+SE ALLRRH  EDVFG+Q+AG+  D MTR  ELL RE    DF+D+N+GCP+D+V   G G+ALM R  +L  ++SG  T L        G T     + P LT+K+RTGW EK+PTAH L+P++Q                ++       V A+ +HGRSR QRYTK ADW+Y+ +   +Q  S     LP +P +G GD+LSY + + H  +  G L+ C ML RGALIKPWLPTEIKE+RHWDISA+ERLD+LK+FV +GLEHWGSDQ+GVN TRR+LLEW SFL RY+PVGLLE L  P  +NDRP PY GRSDLESLMAS    DW+K+SEMLLGPVP  F+FVPKH+AN+++
Sbjct:   92 DAEQDPADLLCRPVASGESCQFGDSCKFSHDIDDYMKRKVKDLGERCPVFDAIGFCRYGMACRFAKAHVEKVDGIYRNLKREGYVETPGHDLGDEVNDLTHDLRLKLRKDTYDFQSKXXXXXXXXXXXXXXXXXXGKDAKAEVAPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPERKPVDFKRKIYIAPLTTVGNLPFRRLMKQTGADITCGEMAMATNLLKAQQSEWALLRRHKSEDVFGVQIAGSFSDQMTRVCELLARE-TDIDFVDINMGCPIDIVCRAGAGSALMTRPPRLLEVVSGALTGLELGTRMRTGGTV----NTPGLTVKLRTGWSEKQPTAHKLIPKLQGVRASMAYVNSAVVTADFKLRATQSVDAITVHGRSRLQRYTKHADWDYIFQCCDAQKDSIDDKPLPRVPFVGGGDVLSYEEFDEHLQN--GKLDTC-MLARGALIKPWLPTEIKERRHWDISASERLDLLKDFVRFGLEHWGSDQKGVNRTRRYLLEWQSFLCRYIPVGLLEAL--PQRINDRPSPYYGRSDLESLMASDQAVDWVKISEMLLGPVPDGFQFVPKHRANAYQ 677
[Close]
BLAST of NO07G04210 vs. NCBI_GenBank
Match: ETP32199.1 (hypothetical protein F442_18973 [Phytophthora parasitica P10297])

HSP 1 Score: 493.4 bits (1269), Expect = 1.100e-135
Identity = 289/596 (48.49%), Postives = 355/596 (59.56%), Query Frame = 0 
Query:  127 DVHADKEEGLCRSFLE-KRCTYGDGCKFSHDTIGYLARKPADLGPVCPVFSTYGECPSGVTCRFGGTHIDKGRGVSIIMAKAG-----------------------------GKXXXXXXXXXXXXXXXXXXXXXXAPAKEEGTEEEAIEYNLAGYPAR----------------------------EGKPVDWNGKVYVAPLTTVGNLPFRRVMKDLGADITCGEMALANNLLGGQKSETALLRRHPCEDVFGIQLAGAHPDMMTRTTELLVREGIKADFIDLNLGCPLDLVNNQGMGAALMGRANKLRSILSGMSTVLRKYHPPEGGATYVRLSSCPPLTIKMRTGWDEKKPTAHHLVPQIQ----------------EWAAAGECDVGAVFIHGRSRQQRYTKKADWNYLQRVASSQNTS-----LPLLPVIGNGDILSYTDHEAHKASYTGSLEPCAMLGRGALIKPWLPTEIKEQRHWDISANERLDILKNFVAYGLEHWGSDQRGVNTTRRFLLEWLSFLHRYVPVGLLEHLNQPLSMNDRPVPYRGRSDLESLMASPYDQDWIKLSEMLLGPVPASFKFVPKHKANSWE 644
            D   D  + LCR     + C +GD CKFSHD   Y+ RK  DLG  CPVF   G C  G+ CRF   H++K  G+   + + G                                  XXXXXXXXXXXXXXXXXX   AK E   E                                         E KPVD+  K+Y+APLTTVGNLPFRR+MK  GADITCGEMA+A NLL  Q+SE ALLRRH  EDVFG+Q+AG+  D MTR  ELL RE    DF+D+N+GCP+D+V   G G+ALM R  +L  ++SG  T L        G T     + P LT+K+RTGW EK+PTAH L+P++Q                ++       V A+ +HGRSR QRYTK ADW+Y+ +   +Q  S     LP +P +G GD+LSY + + H  +  G L+ C ML RGALIKPWLPTEIKE+RHWDISA+ERLD+LK+FV +GLEHWGSDQ+GVN TRR+LLEW SFL RY+PVGLLE L  P  +NDRP PY GRSDLESLMAS    DW+K+SEMLLGPVP  F+FVPKH+AN+++
Sbjct:   21 DAEQDPADLLCRPVASGESCQFGDSCKFSHDIDDYMKRKVKDLGERCPVFDAIGFCRYGMACRFAKAHVEKVDGIYRNLKREGYVETPGHDLGDEVNDLTHDLRLKLRKDTYDFQSKXXXXXXXXXXXXXXXXXXGKDAKAEVAPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPERKPVDFKRKIYIAPLTTVGNLPFRRLMKQTGADITCGEMAMATNLLKAQQSEWALLRRHKSEDVFGVQIAGSFSDQMTRVCELLARE-TDIDFVDINMGCPIDIVCRAGAGSALMTRPPRLLEVVSGALTGLELGTRMRTGGTV----NTPGLTVKLRTGWSEKQPTAHKLIPKLQGVRASMAYVNSAVVTADFKLRATQSVDAITVHGRSRLQRYTKHADWDYIFQCCDAQKDSIDDKPLPRVPFVGGGDVLSYEEFDEHLQN--GKLDTC-MLARGALIKPWLPTEIKERRHWDISASERLDLLKDFVRFGLEHWGSDQKGVNRTRRYLLEWQSFLCRYIPVGLLEAL--PQRINDRPSPYYGRSDLESLMASDQAVDWVKISEMLLGPVPDGFQFVPKHRANAYQ 606
The following BLAST results are available for this feature:
BLAST of NO07G04210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_002181140.13.600e-14450.00predicted protein, partial [Phaeodactylum tricornu... [more]
GAX23586.18.000e-14450.96tRNA-dihydrouridine synthase 3 [Fistulifera solari... [more]
OQS07990.12.900e-14150.00tRNA-dihydrouridine synthase 3 [Thraustotheca clav... [more]
XP_012203227.18.300e-14151.82hypothetical protein SPRG_08593 [Saprolegnia paras... [more]
XP_008614920.11.200e-13950.46hypothetical protein SDRG_10695 [Saprolegnia dicli... [more]
XP_008867229.12.100e-13949.45hypothetical protein H310_04596 [Aphanomyces invad... [more]
XP_002907473.12.800e-13645.53tRNA-dihydrouridine synthase 3 [Phytophthora infes... [more]
ETK74588.11.100e-13548.49hypothetical protein L915_18618 [Phytophthora para... [more]
ETO62981.11.100e-13548.49hypothetical protein F444_19147 [Phytophthora para... [more]
ETP32199.11.100e-13548.49hypothetical protein F442_18973 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G04210.1NO07G04210.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|581467gene_2769Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101321g2gene3604Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G04210.1NO07G04210.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G04210 ID=NO07G04210|Name=NO07G04210|organism=Nannochloropsis oceanica|type=gene|length=4411bp
ATGACAACCCTTGGAAATGCTACTAAGCCTGTTCCAGCTGCTGTTGCACT
AGCAGCACCCATCCAGAACGACACCAGCGGTACAGCCCCAGCAACTGCGC
CCGTGGCGCCGTCCAAAGCACAACAGGCGATGGAGCAGCAGACACAGCAC
AAAGATAATGGAGGAGAAAATGGGGGCGATGGCGTTGATACGTGGCATGG
TGGAGGTAAAAAAGTCGGCATGGACGTCCTTGTCAAGGCAGAgtaagtgg
gggaataacccaagaaaatgcggtcagaaaccacctgagggtgggaacac
ggatatgacattcgtagcgcattcacaagaggtctctctctctttcgtca
taccattctttctctgtacacatttcagGTATCGCGTCCCGCAATTTGTC
CCGCTTTCGGCCTTCCCTGCTTCCTTCCCCCCACCTTCCCCCATAGACCA
TGACCACAACGGTAACGGCTCCAAAAGGAAAGGCAGCGGCCGCAACCATA
AACGACCCCGGGACGATGTGCATGCTGATAAGGAAGAAGGCCTCTGCCGG
TCCTTTTTGGAGAAGCGGTGTACTTATGGGGATGGATGTAAATTCTCGCA
TGATACGATCGGGTACCTTGCACGGAAGCCGGCGgtgagtgagtgattga
tgtagcaggggagggagggtgggagggcatgacaggaaaagagaagggga
acaattcaatgccatttgtgctagaaacattatgtttcggagtcattaat
taagcactctgttatgttcctttctttactcagGACCTAGGACCCGTGTG
CCCGGTGTTTTCCACTTATGGAGAATGCCCGAGCGGGGTCACGTGCCGCT
TTGGAGGGACGCACATAGACAAGGGAAGAGGTGTCTCTATCATCATGGCC
AAGGCGGGAGGGAAGGAGGGAGGGAAGGATGATGAAgtgacggcgggtgc
atctctcactgctggagatgggaaagcagcgacaaccgcgacgacggcag
caccaccacaagtcgaagcagcgagtgcctccccccctcctccatccctg
cggagcgaaatattttccctggcccttctctcctcctcctccggcgcaat
gcctaccctttccttacccctcgcgccacaaagcagGGAGGGAAGCAAGG
GGATAAGAAGGGCAAGGCCACCGAAGAGCAGGCACCTGCAAAGGAGGAAG
GGACGGAGGAAGAGGCGATCGAGTATAACCTCGCTGGATACCCAGCGAGG
GAAGGGAAACCAGTCGATTGGAATGGGAAGGTGTACGTGGCGCCTCTGAC
GACGGTTGGAAACTTGCCGTTTCGGAGGGTGATGAAGgtgagggagggag
ggagggggggaaggagggagggagggaggggctggggcgcaggccgcgag
ggtcctaactttgtacgcttgtgcttccctcattagtccttaaccttgct
cttgatgcttttctcttccttttggcctgtgtgattatggtccgtcgctt
gttgatcatgcgcctgacccctactgccttcccctacccgctcctccctc
attcccctccttcgtctcccagGACCTGGGCGCGGATATAACGTGCGGGG
AGATGGCCTTGGCGAATAATCTACTCGGGGGGCAAAAGAGTGAGACGGCC
CTCCTCCGCCGACACCCCTGCGAGGACGTCTTTGGGATCCAGgtgcctcc
ctctcctccctccttccctccatccgtccccttcccttcccttcccttct
tgtcggcaagcatcgttttcaccttctctccctcccgcttcccctctccc
cctctctctacccctctctcttgtccctctgatcaagCTTGCCGGCGCTC
ACCCGGACATGATGACCCGCACCACCGAGCTTCTCGTCCGCGAGGGCATC
AAGgtacctcaccctccctccttctttttctcgttctcctccttctcctt
ctccttctccttctccttttcctcctctttctttccctccctctttacgc
cctcctggctcatccctctcctccctccctccctctcccctccctcccag
GCAGACTTTATAGATCTCAATTTGGGCTGTCCTCTAGATCTAGTGAACAA
CCAAGgtatccctccctccctccctccctccctccctccctccctccctc
cctccactctctctccctccctccctgcctccctccctccttccctccct
ccctcccttccatcctccctcctgtcatccacgcttcttccttccctccc
tcccccccatcctccctccctccctagGCATGGGCGCGGCCTTGATGGGT
CGCGCCAATAAACTCCGAAGCATTCTCTCCGGCATGTCCACCGTTCTCCG
CAAGTATCACCCACCCGgtgcgccctctctccctgcctccctccctccct
ccctccctccctccctccctccctccctccctccctccctccctccctcc
ctccctccctcccactcctcctcctcccgatttgctcgctcacttgaggg
gcttacatttctctccctcttttcacgccccctgagcagAAGGAGGGGCT
ACCTATGTTCGCCTCTCGTCCTGCCCGCCCCTTACTATCAAGATGCGCAC
CGGCTGGGATGAGAAGAAACCTACCGCCCACCACCTCGTGCCACAGgtac
ctccctccctccctccctccctccctccctccttcattccctgtttcctc
ccgcccgccctcctccctccctccctccctccctccctcgtccatgctca
gaacttcccttttctcattcccgccctccctccctccctctctctagATC
CAGGAGTGGGCAGCCGCGGGAGAGTGTGACGTTGGTGCTGTCTTTATCCA
CGGCCGCTCCCGACAACAACGgtgagttacatcaccctctctccttgcct
tcctctctcttttcgcccctgctttcctcaaatatctaccgctcgctcat
acctgatcccctccctccctccctccctctctccctccctccctccccaa
atatctctccctcacctcagCTACACCAAAAAGGCCGACTGGAATTACCT
CCAGCGCGTCGCCTCCTCCCAGAACACCTCCCTCCCCCTCCTTCCCGTCA
TCGGCAACGGCGACATCCTGTCCTACACCGATCACGAGGCACACAAGgta
ttatccctttccctccctccctccctccctccctccctaaacctctcagc
cccttgatcccctgagacgaaaacactcctggctcatccctccccccctc
cctccctccctccctccctccctccctccctccctccccagGCCTCCTAC
ACCGGCTCTCTCGAGCCTTGTGCTATGCTAGGCCGAGGCGCCCTCATTAA
GCCGTGGCTACCCACCGAAATTAAGGAACAACGGCATTGGGATATATCCG
CCAACGAACGgtgagtgaccgattcatacattggatgtctgcgtaaagac
atgggattcaggaacaagggccttgggattgggatatacagaataacata
atatttatattatattcttatattcttacattacattatatgagttcttg
cttagtcccgcgcttcccttcctggtcttcatctctccttcctcttctcc
aagagcacttattgcgtcaagctcacgattttctcttcacttagttctct
ccctctctccctctctccctccctccctccctccctccccctgttcctag
CCTCGATATTCTGAAGAATTTTGTCGCCTATGGTCTTGAGCATTGGGGCT
CGGATCAGCGGGGCGTTAACACCACTCGTCGTTTCTTGCTCGAATGGCTC
TCGTTTCTGCACCGgtaagcgggggaagggggagggaaggaggcagagag
ggggggaagaagggagggagggaggaagggaaggagggagacagctagaa
gcggtggcacgaatgagggaggcggtttgaggcgttccctttgcacgcac
tcgtgtattcgttcgctccctttcacccattcctccctccccccctcctt
ccccccctccctccccccctcctcctccctccctccccccctccctccct
ttctccccagCTACGTGCCTGTCGGTCTATTGGAGCACCTTAATCAGCCC
CTGAGTATGAATGACCGCCCCGTCCCTTACCGGGGTCGCAGCGACCTCGA
GTCTCTCATGGCTTCTCCCTACGATCAGgtacgtgcccgtctctccctcc
ctccctccctccctccctccctccctctctccctcggccaccgggaccct
ccctccctccctccctccctctccatttttctccttccctccctccctcc
ttcccgtagGACTGGATCAAGCTGTCTGAGATGCTATTAGGGCCTGTGCC
CGCGTCCTTTAAATTCGTACCGAAGCACAAGGCCAACAGCTGGGAGAATG
CCAACGGCTAA
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protein sequence of NO07G04210.1

>NO07G04210.1-protein ID=NO07G04210.1-protein|Name=NO07G04210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=648bp
MTTLGNATKPVPAAVALAAPIQNDTSGTAPATAPVAPSKAQQAMEQQTQH
KDNGGENGGDGVDTWHGGGKKVGMDVLVKAEYRVPQFVPLSAFPASFPPP
SPIDHDHNGNGSKRKGSGRNHKRPRDDVHADKEEGLCRSFLEKRCTYGDG
CKFSHDTIGYLARKPADLGPVCPVFSTYGECPSGVTCRFGGTHIDKGRGV
SIIMAKAGGKEGGKDDEGGKQGDKKGKATEEQAPAKEEGTEEEAIEYNLA
GYPAREGKPVDWNGKVYVAPLTTVGNLPFRRVMKDLGADITCGEMALANN
LLGGQKSETALLRRHPCEDVFGIQLAGAHPDMMTRTTELLVREGIKADFI
DLNLGCPLDLVNNQGMGAALMGRANKLRSILSGMSTVLRKYHPPEGGATY
VRLSSCPPLTIKMRTGWDEKKPTAHHLVPQIQEWAAAGECDVGAVFIHGR
SRQQRYTKKADWNYLQRVASSQNTSLPLLPVIGNGDILSYTDHEAHKASY
TGSLEPCAMLGRGALIKPWLPTEIKEQRHWDISANERLDILKNFVAYGLE
HWGSDQRGVNTTRRFLLEWLSFLHRYVPVGLLEHLNQPLSMNDRPVPYRG
RSDLESLMASPYDQDWIKLSEMLLGPVPASFKFVPKHKANSWENANG*
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Synonyms
Publications