NO07G04190, NO07G04190 (gene) Nannochloropsis oceanica

Overview
NameNO07G04190
Unique NameNO07G04190
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length6834
Alignment locationchr7:1163847..1170680 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:1163847..1170680 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
GO:0006904vesicle docking involved in exocytosis
Vocabulary: INTERPRO
TermDefinition
IPR001619Sec1-like
Homology
The following BLAST results are available for this feature:
BLAST of NO07G04190 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G04190.4NO07G04190.4-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO07G04190.3NO07G04190.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO07G04190.2NO07G04190.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO07G04190.1NO07G04190.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|669296gene_2766Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G04190.4NO07G04190.4Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO07G04190.3NO07G04190.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO07G04190.2NO07G04190.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO07G04190.1NO07G04190.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G04190 ID=NO07G04190|Name=NO07G04190|organism=Nannochloropsis oceanica|type=gene|length=6834bp
ACAGGCAGCAACAGACGAACAGAAGCCTTGTGACAAAGAGCGGCAGCAGA
CCCCATCCTCCCTCTCCTACCTAATGAAGCCTCCGCCGTCCTTGTCCTTT
ACCCAATTCTCCCACCCTCAGCATCATCATGCCGCCGCTGCACGTACGCC
CCATCGACATGGCCAAGAGCACGGCCCTTCGCCCATCTCAGCCGCTGGCT
GCGGGCGCCGCCCCTTTGAAAGCATTGCAGAGGACCTGCTGGGGGCTGCA
GTGTTGCTGGACGCCGGGGCGGGTGAGgtacgtggggggcaagaatggaa
gggagtacgcaggggtaagggagggagggagggacgggatctcgtacatg
gacaagcacacagaacccccgcattaagccctttcacctaaatctcacac
gtacagATGGTACGCTGGGTAGGTGGCGTAAATTTCTTGATGGACGAGCT
GGGTGCTGCCACGGTGCTGTCGCTGGAGGAGGCGGAGGGATTGGAAAAGG
CGCTCAAGGTAGGAGGAAGAGGAAGAGGAAGAGAAAAGAGTAGGAGGAGG
AGGAAGAAGAGGAGGAGGGAAACGCAACAATTCAAAGCAGGAATGGAAAA
TCACACGGTCCGTATGCAACGTTTTCTACATGAATGTAAGCTTATTCCGC
GTCCCCTCTTTCATTTTCTCTGACCCCTCCCCCTTCCTCCAGCCGTACTC
CCGCGCGGTCGTGCTGATGACTACGTATCTGTGGGAGCATGAGCATGTCC
TTCGGGCCCTACTAGGCTTCCGGCAGAAACGGGAATGGGAGGAGGTAAGA
CGTACGGGAAAGACAAGAAACAAACGATGAATCAATGGGAGGAGGGATAA
GGGAGAGTCACGAGACGAACGGAGAATCAATGGAAATAGACAAAGGGGGG
AGGACGTGCAGGGACCGTTTGAAGCTATGACGGTACGTTAGCTGGCTCTC
ACCGCTGACATTCCATTCTGCCCGCCCTCCTTCCCTCCCTCCTTCCTTCC
CTCCTTACTCCTTGCCTGCAAGATACGCATCTACACCTCTATTTCCGCTG
GAGCCCATACACAGCACCCTTTGGGTGAGACTATCTCTCGGAATTACCAC
ACCCCGGAGATATACGGgtaagcgcgccctctcctccctccctccctccc
tccctccctccctcccttcctccctctctccctccctccctccctcccgt
cttccctccctctcttcctccctccctccctcctttcctccctccctccc
tttcttcctccctcccttcctcccttcctccctcccttcctccctccctt
cctcccttcccccttcatccctcccaccttcccttcatctctccctccct
ccctctctcccttcctccctccaaacgccgctcatacccctcaccgaatc
acttcttccttcccttccaatcacccgtttgtctacccccccgctccctc
cctccctccctcgctccctccttccagGATTTACCGCGACATGCTCCGCG
GCCTGCTCCCCCCCAACACGACGCTCTCCATCGCCGCCCTCCCCCTCCAC
CTCTACCCCCTCTTCCCCACCCCACCCCCTGCTCTTCTGCCTCCCACCGC
TACCTCCTCCTCCGCCTCCACGACAGgtaggtcgcttttagatataaagt
gacacggggcgtatggctcggttgtctgagcagcactctctaccatccct
ccctccctccctccctccctccctccctccctccctccctccctccctcc
ctccctccctccctccctcccttactgcctttggacctccattgtccaat
gcatacgctcaaccacctctttctatatctcccttccctcctccctccct
cccgccctccctccctcccacagGCCAGATTCACTCGGACTTCTTCTCCC
TCGCCTTCGGAGCGACTGAGGAGGAGGAAGTGCACCCACCTTCCTCCTCC
TCTCCTTTTGGCACGCAACAGCAGCAGCAGCAGCAGCAGCCACGTCCTTC
CTCCCTTTTCGAGAGTGTATTCAGACAAGAGgtaagccacgttaaattag
ttgataatatattcctacgctctcttccgtttcacaagcttacgcctcct
actcctccctccctccctccctccctccctccctcccagGACCCAGCCGA
GTGCAGCCAAGGCCTAGAGCTGACCCTCCCCCCTCCCTCCCCCCCTGCCT
CCTCACCACCAACCTGGACTGCCAACAAAGCTACCCCCTTCAGCTCGCAG
ACCTCCGGAAGCAACAGCCTCGGCCACCACACCGACGCCTCGACGACCTC
TCCCACCTCCTTCCCGAGCACGTCCCACCgtacgtgcccctccctccctc
gccccctccctccctccctcccttcctccctccctctttttccgccaacc
acatacgcaggcaagggcctcctttctctttctcccatctcccccctccg
tttttcgtgcccctcacctgctccccctccctccctctctccctcagCCT
CCTCCGGCAGCAATACCGTCTTGTGGCCCATGAGGTGGCTGGAGCCCTCC
CCCACCAGCTTGGCCTTGACGTTCAAGGCGCCATTTATGCTgtacgtccc
tccctccctccctccctccctccctccctccctccctccctccctccctc
cctccctccctccctccctccctccctccctccctccctccctccctgtt
tcctgtcacccaccagcccgatcttgcctcccttcctccctccctccctc
cctcagGTGGGACCGACAAGCTCACTCTTGGGCGCCTCCATTGCCTCTAT
ACTTGACACCGCTGCTGCTACCGTGCCCCTCTCCCCTTCCTCCCCTCGgt
acgtgatccctccctccctcgcttgattactcttgcctctcattctcgtc
atgccgtccgctttactcgacctccctccctccctccctccctccctccc
cttatccctccctccctccctccctccctcccaccctttagCCGCTCTCT
CTCCCCCTCCGCCTCCTCCTCCCCCCTCCCTCCGCCTCCTCCTCCTCCCT
CCCCCGCCCCCAGCCCGCCCTCCCTCCCTCCGTCCTGCTGCCCTCCTCCT
CCTCGACCGCACCCTTGACGTGTCCACTCCCATTTCCTGCGACGGGTCGG
GGCTCCTGCAGAAAATCTACGCGCTGGTGCCACGCAGgtgaagaggaggg
agggagggagggagcgggggagggagggatacaatgattacctacctccc
ttcttctccctttatttccttccaccctctccataaaacacatggcagCG
GCCCCTCTCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC
TCCCCCTCCTCCTTGTCCTCCTCCCAATGCCGGCAGGAGGCAAGACAGGA
CAAAGAAAACACCAACCGCAGCAGGAACAGCAGCAGCAGCAACAGCAGCA
GCAGCAGCAGCAGCGACATCGGTGTCAACCCGCAAGGCATCTACCCCCCT
CTACTCCCAGCCAACCATCACGAGGCCTTCCCCGCCGTCGCCTCCTTCCC
CTGGCAGgtacctcctcccctccctcccttcctccctccctccctccctc
cctccctccctctcgaaaccgtctgtacagaccttccctgccccctcctc
cctccctccctcccagATCCCCCCCTCCCTCTGCCACCCTCTCCACCCCC
TCCCCTCTGCCCTCGCCCGTGCGTGTACGTTCCTTTCTGAAGAAAAAACT
CATCAGCTCCTGCAGCGGACCTTGACCAGGACGATAGAACGgtacgtgtg
ccctccctcccccctcccttcctccgtccctccgtccctccctccctccc
tccctccctccgttcttcaatgttctctctccctccctccctccctccct
tcctcccttcctccctccctccctccccccttcctccctccgttcttcat
tgttctctctccctccctccctccctcccttccttcctccctccctccct
tcctccgtccctccgtcccttcccccctacgttcttcattgttcactctc
cctccctccctccctccctccctcctccctccctcccttcctccgtccct
tcctccgtccctccgtcgcttcctccctacgttcttcattgttcactctc
cctccctccctcacttcctccctcccttcctccctccctcccttcttcaa
tttcctccatccctccctccctccctccctccatccctccctccctccct
acccagCTACAACTGCACTCCTCCCCCTCCAAAGAGGAGGGGCCCGGGCG
CAGCAGCCATGGCCTTAGTGCTGGCTCTGGCCGAGAAGAAAGACGTGTGC
TATAAGGCCAGGGGCGTGCTGCAGgtaggaagggagggagggcaggacgt
agggtttcaaggcttcaaggaggaatcctttgcctacttacattcgactt
ctcccctcgttttcccctacaccctccccacatcctcttctctctctctc
tctctctctctctctctctctctctctctccagGTGGCCCTTGCCATCAT
CGAGGCCCTCCAGCGCGCCAAAAGCGCACGATGGGAAGAAGCAGCAGCCA
CGCACAAGgtacggccttccctccctctttccctccctccctccctccct
ccctccctccctccctcccgctctctctttcaacagcactactgcctcat
gccactcctccttccctccctccctttcccctccctccctccctcccttt
cccctccctccagGTGCTTCGACAGCTCCTCAAGGAAGGCGGCGATGACC
TAAACCTTATGGCCGTCCTGATCAAGGCCATCGAGgtaccctcctcccct
ccctccctccctccctccctccctcgcctcctccctcccaacccctcctg
tccctcttcctcccacctcacagGCCCTCCCCCTCCGTTCCTCCCTCCTC
CTCCTCCTCTTTGCCCTTCCCCTCTGGGGCGAGCTCTACCTCCATGCCTC
CTCCTCACTCAATACCTCCCTTTGCGTCTCACTCGCCCGTAAGATCCTTC
AAACCACGGACACGGCCGAGgtacgtccctccctccctcccttcctccct
cccttcctccctcccttcctccctccctccctcccttcctccctcccttc
ctccctcccttccctccctccctccctccctccttccctccctccatgtc
tcccttcctccttctctcatcaacccattctctctccctcccttcctccc
tccctccctccctccccgcagCTCCAATCCCTCGGCTGGCTCCCCTCCGA
CGTCATCGCTGCCGTCCTCTCTCGgtaagtcacagacactccacagacac
agaccgctgtctcggcatagaggatcaagccgctcgccctcccgccctcc
ctccctccctcccttcgggatgcgcagaatatatagtccttaccctccct
cccttcctccctcccttcctccctccctccccccctcctagACAAGGGAG
TCAGGCAGCGCTGGAGATGGAGGTGAGGGATCTAGTGGAGGACTGCTGCC
TCTCGCCCCTGCAGGATTTGGCGGGCGCACGACGgtgaggagggagggag
ggagggagggagggggaggtattggggtccacaacaacgagcttggtcaa
acgatgatcctttccccctgtcctccctccctcactccctccctcccttc
ctcagGTATCTGCACTCCCCGGCCCTTCGTGCCTTGGCTAGCAGCGAGGA
TCTGGGAGGGAGGGGCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCG
TGGGGCGACTGCTCGATCTGGTGTTGCGCTTGGAGGAGgtgaaggaggga
gggagggcgggcgggagggagggagggagggaggggaatggggagggaag
gcctttctattgtgccgtgcaagcgcttcacgctcctccctccctccctc
cctccctccctcccgccctccctccattcagGGCGATCGTGGCTTTGACG
AGCTGAGCCGTGACGTCACAAAGGTCGGGGCTCCCTCTCTACAGCAGCTC
TCGCGTGCAGgtgcgttccctccgtccgtccgtccgtccctccctccctc
tcctcgcccacggcgtgaaatcattcattcccaaaaccaaaccacccttc
ctccctccctccctccttccctccctccctccttccctccctccctccct
cccagGCCTTGGCCTCCTCGCCCGCGGTGTCAAGTCTTTGGTGGGAGGGG
TGGGGGCAGGGCAAGGGATTGTGGACCGACCATTCCTCGTCCTCTTCATC
CTGGGCGGGATCAGCCCGGAGGAACTACGgtgcgtctgcccttccctccc
tccctccttccctccctccctccctgccggaaggtcaggtggttggaggg
atgcggatggggaactcagccctccctccctccctccctccctccctccc
tccctccctcccttaaatcatcacagGGAAGCTGCCGAGGTCATCCACAA
CGCTCGTGCTCGCCGACGTCGCACCGGCCTTGGACCACCGgtacctcccc
ctccctccctccctccctccctccctccctccctccctccctccctccct
gtatacaaagcctcacccaggatgttttcccctaagcctatgtgtctcct
tcctccttccctccctgcacattagGTGGAGCAGGTCCTCCTCATCTCGA
CGGCCTTGCTCTCCCCTGAAGGCATGTACACCCACACGTTCTTGTAGGGA
TAGGGAGGGAGGGAGGGAAAGGAAGGCAGGGCGAACATCTTGTCATGATT
GTCAAAAGAAATAGGGACTCAGGCGGGATAGCAC
back to top

protein sequence of NO07G04190.4

>NO07G04190.4-protein ID=NO07G04190.4-protein|Name=NO07G04190.4|organism=Nannochloropsis oceanica|type=polypeptide|length=745bp
MKPPPSLSFTQFSHPQHHHAAAARTPHRHGQEHGPSPISAAGCGRRPFES
IAEDLLGAAVLLDAGAGEMVRWVGGVNFLMDELGAATVLSLEEAEGLEKA
LKPYSRAVVLMTTYLWEHEHVLRALLGFRQKREWEEIRIYTSISAGAHTQ
HPLGETISRNYHTPEIYGIYRDMLRGLLPPNTTLSIAALPLHLYPLFPTP
PPALLPPTATSSSASTTGQIHSDFFSLAFGATEEEEVHPPSSSSPFGTQQ
QQQQQQPRPSSLFESVFRQEDPAECSQGLELTLPPPSPPASSPPTWTANK
ATPFSSQTSGSNSLGHHTDASTTSPTSFPSTSHPSSGSNTVLWPMRWLEP
SPTSLALTFKAPFMLWDRQAHSWAPPLPLYLTPLLLPCPSPLPPLAALSP
PPPPPPPSLRLLLLPPPPPARPPSLRPAALLLLDRTLDVSTPISCDGSGL
LQKIYALVPRSGPSPSSSSSSSSSSSSSSPSSLSSSQCRQEARQDKENTN
RSRNSSSSNSSSSSSSDIGVNPQGIYPPLLPANHHEAFPAVASFPWQIPP
SLCHPLHPLPSALARACTFLSEEKTHQLLQRTLTRTIERYNCTPPPPKRR
GPGAAAMALVLALAEKKDVCYKARGVLQVALAIIEALQRAKSARWEEAAA
THKVLRQLLKEGGDDLNLMAVLIKAIEALPLRSSLLLLLFALPLWGELYL
HASSSLNTSLCVSLARKILQTTDTAELQSLGWLPSDVIAAVLSR*
back to top

protein sequence of NO07G04190.3

>NO07G04190.3-protein ID=NO07G04190.3-protein|Name=NO07G04190.3|organism=Nannochloropsis oceanica|type=polypeptide|length=760bp
MLRGLLPPNTTLSIAALPLHLYPLFPTPPPALLPPTATSSSASTTGQIHS
DFFSLAFGATEEEEVHPPSSSSPFGTQQQQQQQQPRPSSLFESVFRQEDP
AECSQGLELTLPPPSPPASSPPTWTANKATPFSSQTSGSNSLGHHTDAST
TSPTSFPSTSHPSSGSNTVLWPMRWLEPSPTSLALTFKAPFMLWDRQAHS
WAPPLPLYLTPLLLPCPSPLPPLAALSPPPPPPPPSLRLLLLPPPPPARP
PSLRPAALLLLDRTLDVSTPISCDGSGLLQKIYALVPRSGPSPSSSSSSS
SSSSSSSPSSLSSSQCRQEARQDKENTNRSRNSSSSNSSSSSSSDIGVNP
QGIYPPLLPANHHEAFPAVASFPWQIPPSLCHPLHPLPSALARACTFLSE
EKTHQLLQRTLTRTIERYNCTPPPPKRRGPGAAAMALVLALAEKKDVCYK
ARGVLQVALAIIEALQRAKSARWEEAAATHKVLRQLLKEGGDDLNLMAVL
IKAIEALPLRSSLLLLLFALPLWGELYLHASSSLNTSLCVSLARKILQTT
DTAELQSLGWLPSDVIAAVLSRQGSQAALEMEVRDLVEDCCLSPLQDLAG
ARRYLHSPALRALASSEDLGGRGSSSSSSSSSSFVGRLLDLVLRLEEGDR
GFDELSRDVTKVGAPSLQQLSRAGLGLLARGVKSLVGGVGAGQGIVDRPF
LVLFILGGISPEELREAAEVIHNARARRRRTGLGPPVEQVLLISTALLSP
EGMYTHTFL*
back to top

protein sequence of NO07G04190.2

>NO07G04190.2-protein ID=NO07G04190.2-protein|Name=NO07G04190.2|organism=Nannochloropsis oceanica|type=polypeptide|length=932bp
MKPPPSLSFTQFSHPQHHHAAAARTPHRHGQEHGPSPISAAGCGRRPFES
IAEDLLGAAVLLDAGAGEMVRWVGGVNFLMDELGAATVLSLEEAEGLEKA
LKPYSRAVVLMTTYLWEHEHVLRALLGFRQKREWEEIRIYTSISAGAHTQ
HPLGETISRNYHTPEIYGIYRDMLRGLLPPNTTLSIAALPLHLYPLFPTP
PPALLPPTATSSSASTTGQIHSDFFSLAFGATEEEEVHPPSSSSPFGTQQ
QQQQQQPRPSSLFESVFRQEDPAECSQGLELTLPPPSPPASSPPTWTANK
ATPFSSQTSGSNSLGHHTDASTTSPTSFPSTSHPSSGSNTVLWPMRWLEP
SPTSLALTFKAPFMLWDRQAHSWAPPLPLYLTPLLLPCPSPLPPLAALSP
PPPPPPPSLRLLLLPPPPPARPPSLRPAALLLLDRTLDVSTPISCDGSGL
LQKIYALVPRSGPSPSSSSSSSSSSSSSSPSSLSSSQCRQEARQDKENTN
RSRNSSSSNSSSSSSSDIGVNPQGIYPPLLPANHHEAFPAVASFPWQIPP
SLCHPLHPLPSALARACTFLSEEKTHQLLQRTLTRTIERYNCTPPPPKRR
GPGAAAMALVLALAEKKDVCYKARGVLQVALAIIEALQRAKSARWEEAAA
THKVLRQLLKEGGDDLNLMAVLIKAIEALPLRSSLLLLLFALPLWGELYL
HASSSLNTSLCVSLARKILQTTDTAELQSLGWLPSDVIAAVLSRQGSQAA
LEMEVRDLVEDCCLSPLQDLAGARRYLHSPALRALASSEDLGGRGSSSSS
SSSSSFVGRLLDLVLRLEEGDRGFDELSRDVTKVGAPSLQQLSRAGLGLL
ARGVKSLVGGVGAGQGIVDRPFLVLFILGGISPEELREAAEVIHNARARR
RRTGLGPPVEQVLLISTALLSPEGMYTHTFL*
back to top

protein sequence of NO07G04190.1

>NO07G04190.1-protein ID=NO07G04190.1-protein|Name=NO07G04190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=760bp
MLRGLLPPNTTLSIAALPLHLYPLFPTPPPALLPPTATSSSASTTGQIHS
DFFSLAFGATEEEEVHPPSSSSPFGTQQQQQQQQPRPSSLFESVFRQEDP
AECSQGLELTLPPPSPPASSPPTWTANKATPFSSQTSGSNSLGHHTDAST
TSPTSFPSTSHPSSGSNTVLWPMRWLEPSPTSLALTFKAPFMLWDRQAHS
WAPPLPLYLTPLLLPCPSPLPPLAALSPPPPPPPPSLRLLLLPPPPPARP
PSLRPAALLLLDRTLDVSTPISCDGSGLLQKIYALVPRSGPSPSSSSSSS
SSSSSSSPSSLSSSQCRQEARQDKENTNRSRNSSSSNSSSSSSSDIGVNP
QGIYPPLLPANHHEAFPAVASFPWQIPPSLCHPLHPLPSALARACTFLSE
EKTHQLLQRTLTRTIERYNCTPPPPKRRGPGAAAMALVLALAEKKDVCYK
ARGVLQVALAIIEALQRAKSARWEEAAATHKVLRQLLKEGGDDLNLMAVL
IKAIEALPLRSSLLLLLFALPLWGELYLHASSSLNTSLCVSLARKILQTT
DTAELQSLGWLPSDVIAAVLSRQGSQAALEMEVRDLVEDCCLSPLQDLAG
ARRYLHSPALRALASSEDLGGRGSSSSSSSSSSFVGRLLDLVLRLEEGDR
GFDELSRDVTKVGAPSLQQLSRAGLGLLARGVKSLVGGVGAGQGIVDRPF
LVLFILGGISPEELREAAEVIHNARARRRRTGLGPPVEQVLLISTALLSP
EGMYTHTFL*
back to top
Synonyms
Publications