NO07G04160, NO07G04160 (gene) Nannochloropsis oceanica

Overview
NameNO07G04160
Unique NameNO07G04160
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1674
Alignment locationchr7:1156919..1158592 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:1156919..1158592 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO07G04160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G04160.1NO07G04160.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|581441gene_2763Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G04160.1NO07G04160.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G04160 ID=NO07G04160|Name=NO07G04160|organism=Nannochloropsis oceanica|type=gene|length=1674bp
CACCCTCTCGAATTTCGCCTCTCGTTTCTCACAGCTACTATCCTCTATCT
GTCATGCACATATTATACAGACAAATGGACATCCTCGTCCTTTGCCAAAT
TCTTCTCTATGCCCTTTTCCTTCCCACGCCTATCGCGGCTGACCTTGCCC
TTCTTCCCACCCGGGACGCCGCCCGAGGCATGAGTTGGGAGCAGCTCGAG
CACATTTTTAAGGAAAGCACGATTGACGAAGGTATCCCTGAAGGTTATTC
CTACGGCTATGCTCTTGTCAACCCCACCTTTTCGGGTGCCATCCAGGTGG
CTGCAGACATCTTTTGGAAAGGCAAGCGCCTCGAAGTCAAGTCAGGAGAG
AACTGCCACGGGCGAGACTGTGGGCAAATGGGGGTGGTGCTGAACTACCT
TGGAGCAAGCAACCGTGTCCAGTGGCAGGAAATGCCTGGTATTGCCTATA
TTGGTCAACTCAAGGACATCAAGTCTTCCCTCGAACCGCTACAGCTCGAT
GACAATCTCTCCATCATTGTCGATTATCAAAACGGTGGAGGCGATGAACT
TCGCCTGGTCAACAGCAAAGAGAGGATCTACCTCGGACGAGGGGTAGATT
GGGTGAGCCCGCAACTCTATGCGTACTTTGTCCTTCAATTCTACGACGTG
CCACAGAAAGTAGAGCTATCATTCGGCACGGCTCATTATCACCAGGCACG
AGAGAGGGCTTACCTTGCAGCAGGGGCAACTCAGGGGCCGGACCCGATGC
AGGTGGTGCAGGCGATACCAGATACAGGACGGGAGCGGGAGGGGGGCTTG
ATAACTAGAAAATCAGAAAAGGTTGCAGCGATTGGACTGCTTAGTGGGGG
TAAAACGACGACCATAGTGGGATCGGAGGCGCGCTTTCGGGGGAGCGGCG
GTAGAGGGGGTAAGGGAGGGGACTAAACTCTGAGTGGAAATAATGCAGGG
ATATTGTGAGGGGGAAAGCAGAGATTTCTAATCAGGAAACATTCGTATAA
TTACGATGACAGAGGGTAAAGGACGACTGGAATTCGGAAGATATACACGT
AAATAAGTATCATCATGGCAAGAAAAAAAAAGCCAGGGTCCACTCAGCGA
GCTCTTTTTCTGACGAGATTTCCATAAATTTAGCGCCTCGTCGTCCATCC
CTTGTGAAAACTTCATCCTTTCTGTCTTACTCAGCACCATCACAATGGTG
GGTCCGACGAGAAGGGAATGGCGAAGGTGAAGTAGGGGGGAGGAGGGTGT
TGTGAGGAAGAGCAGTCGCAGGATATGAGGGACGCGAAGCAACACTATGG
TGCTGCTGATCCTTGGAGAAATTAAGTCCATTATCACTAGCAGTCGTAAG
ATAGGTAGGGCATGGACGTGGAAAAATAAGTATACATCTATGCTCTCCGC
TGCAACTGTAGCTGCTGCTGCTGCTGCTGCTTCTACAGCTTCCGGTGTCA
TACCTTGCTGAGCAAGACCAAAAGTCGAAAGGCCGGTCATTTAATCGGAA
TATTTGATATTCATTTACTGCCTCAATGCTTTCAAACCTGTTGGAAGGCT
CGCAAAGAGGAAATCGCTCCCCAAAAATCGTCCGACCCCAACCAACGGCT
TTCTGCGGGCTCTAAAACCGACGTACTATGATAATTGCCACACACTCCCC
CTTTCATTTGGGCGGGGATTCGAG
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protein sequence of NO07G04160.1

>NO07G04160.1-protein ID=NO07G04160.1-protein|Name=NO07G04160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=291bp
MHILYRQMDILVLCQILLYALFLPTPIAADLALLPTRDAARGMSWEQLEH
IFKESTIDEGIPEGYSYGYALVNPTFSGAIQVAADIFWKGKRLEVKSGEN
CHGRDCGQMGVVLNYLGASNRVQWQEMPGIAYIGQLKDIKSSLEPLQLDD
NLSIIVDYQNGGGDELRLVNSKERIYLGRGVDWVSPQLYAYFVLQFYDVP
QKVELSFGTAHYHQARERAYLAAGATQGPDPMQVVQAIPDTGREREGGLI
TRKSEKVAAIGLLSGGKTTTIVGSEARFRGSGGRGGKGGD*
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Synonyms
Publications