NO07G04100, NO07G04100 (gene) Nannochloropsis oceanica

Overview
NameNO07G04100
Unique NameNO07G04100
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4593
Alignment locationchr7:1146601..1151193 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:1146601..1151193 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO07G04100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL100nonsL100Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000430NSK000430Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G04100.1NO07G04100.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|581418gene_2757Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100304g3gene3593Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G04100.1NO07G04100.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G04100 ID=NO07G04100|Name=NO07G04100|organism=Nannochloropsis oceanica|type=gene|length=4593bp
GCATGACTTTATTTTCTGCTGATTCGACCTCGTCATCGACTGCTTCATAC
GTCCGTCAATCTATTTTGCATTTACTTATTCTTTGTTCCTTCAGCTCATT
AACGACAAGGCTTTACCACCTCATCACCACCCACCTCCCGACTGACCCGC
CAGCTCTCTCCCGCCCACCATAACTCATACCAATGCCGGTCGGCTGCACT
CTGAAACGACACCTGGACCACGGGGTGTGGAAACACCCGGACACTCCCCA
CCACTGGTGGCGACGCCCCATGTAGTACCGTGTGATCCGTCACAAGCCAC
GCCTCCTCGCTCGTCCCATCCGCCCTCGATTCCTCAATTATGTGCCCCTT
TCCCTCCGCACTGACATATATCACTTTTTGACAGCCCAAAATCTGCAACT
CATCTCCCCTCCGAACATGAATCCCCGACCGGACCGAGTGGTCAACCAAT
GTGTACTTGAACGACACCCTTTTATCTCCCCCCCTCCCTTCCTTCTCTTG
TGAATAGGACTCATCGAACGAAAACATTATTCGGTATAAGCGTTGGTCAT
GTCCCACATAGCAAACCTCTCTGGCACTCACCGCCACAGGGTCGCCGCCC
AATCTTGGCAGTTCTGGACCGTCGAACGCGACATCCTCTACTTTTAAGGT
GTTTTTCTCGCGCACGATGTCAAAGGACAACATTAACAGCCTGTCCATCT
CCGCGTCTCGCACCCAGGCCCGAGCAAGTGAGTCAGGACTTGCCTTTGAG
GTCGGCGCCCGCCACACAGTGGGGGAACCCCGAATAATGAGTGGGTGATT
AACGACACGTCGGCTCTGAATGTCCGCCTCGACCAAGTGCCCGTCCCACC
CTCCATACACCAGCCACCCCTCTTCTTCCGGACCCAGCGCGCACACCCTT
CCTCCCTCAGCCGCGCGGGGAAACCCCATACATTTCGTCAAATCACGCGT
CAACCAGCCTTCCTCCCCTCCTTCCCCCTTCCCCTCACCCTCCCCATGCT
CCGATCCCCATAAAAGCGAAGGAGGTAGTACATTGCGTCGTCCCACCAGC
ATGACATGCTGCGATGTTTCTTCGATAAAGTAATACACCGTAGGAGCCAG
TGTTGCCCCCTCTCCTACCCTCGGGAGCTGCAACGGCAACACACCCGAAG
GCTTGGAGCACCCTGTTTCATTCACGGCCACTAGGCGATAAAAGAAATCT
GACGGCGGGGAGCGCATTAAGCTCTTGTCCAACACCTGCCCTTGCTCCGG
AACCCAAGAATCTATCACCCCTCTTTCCACCACCATCCAGTCCCCCCCTC
CCCGTCTTTCCCCCCTTCCTCCTCCGTTCTCTATATCGCGACAGCGATGT
AACTCGTAGCTACGGGCGCTGGTGGATCCCCGGAAGGTGAGAAGGCCTTG
GGCTGTCACAGACAAAAGACGTGGTGGGGCAGGCACGGGAAGAGGAAGTG
AGAAAGGGATGGAAGGCAAAGAGACACAGGGTTTGCTGTTGCTATTTTGC
CCTATGCCGCTGTCATGGGAGAAGCAGAGATGGCCGTAGGTGTGCAGCAG
TGACATCATCCCTCTTTCGTCGTAGCGGTCGCCGGAAGGAAAGCCGGGCC
AGTGGTAGGCCCAAAAGACATTGAAACCCCAGGGCTCTTCGTGAAAGTAG
AAGCCACCGCGAAAAGATCGGAAGCGAAGGCTCCAGAGGCAGGCACCAAT
GACGCCTTGTCCAGCTTGGGCTTGAGCAACGAGGGTGGAGAGGAAAGAGG
CCGTGGACGAGAGAGAGGCGAATCCAAACTCACCCACGAAGAAAGGCTTC
TTGCCCTGGCACGCGTGGAGATCAGAGAAGAGGGCATCTACGAAGGATGA
GGGAGGGAGGGTGCATGTGGTGATGGAAGAGAGGATGGGGGAGTCAGCAG
TGCTCCCATCACCCGAAGGATAATAATGACGGGAGACAATGTCAATCGAT
TCCTCGCCCAGCACGCCCGGGTCTACGCCGTGGTGGCCATCAATCACCAA
ATGTCTGCATTCATCCGCCTCCTTGATGATCCTCGCCATGCGAATCGTCC
ATGCAGAGGGACAGTCCAATTCATTTCCCGTTTCCCACGCGAGGATGGTG
GGGTCCTCCCGGTACAATGCACCATTTATTGTATTCCTCCTCCCCACCAC
CGCCCTGATCACCTCGCCCCAATCTTGCAAGCACACATCTTCCTCCCAAA
AAGCCCTTGCGCAGTCCTTGCCTACAAACCCACGCCATCTCGCCATACTT
TCCACTCCACCCACCCATGTCCACTGGTCGATAAGCGGAAGGATTAATCG
AATACCCATTTCTCTTGCCACGTCCAAGGCCTGGTCCAAGACTTGCATGT
ACTGCTCGTTGAGACAGAATTTCTGAGACTTCGGATCCCATTCTACGTGA
CATCGTCGAGCAGGGTCAGGATGGACGATCTTGTCTTCAATGGACAAGGT
ATAGGGCCGCGCCACCCGCCCCCCTTGGTGGAGAACTGAGCGCAAAGCGT
CTGTCTGCTCCCACCGGGTGGGGAGCCGCCAGGGGTCTTGGATAAAGGTT
AGCTCGGGAATATTGAAGGATACAAAGTAGAACGGATAGATCATCGGTGG
TATGGTACAGGTGGGTGCGAGGGCTCGATCCGTGCTTGTGCTGGGAGGGC
TGTCGTCGCTTCCCGGAAGCAGCGAGCGGGAAGAATTCGTGGAGGCTGAT
GCTGTGCTTGTCGTGGCGACGGCATTATCATCTTCATAGAGTACCAGCCC
GCGGCGTTTGATGAACGGGAGGGGTGGAGGCGCAGCCATGGTCGATGGGG
ACCGAAAGCAAAGCGACGAGGAGATAGGCGAGGGGGGAGGTCGAAGCCAA
GGCTACCTTGTGCGGTTTCGCGAGGATGCCTTGAGATTGCGTATAGCTTG
GAGCGTTAATAAAGAACGACAGAAATATGCGATTATGCATAGGCGCTGTT
GTGACGGCATGGCGTTGCGGCTGCCCGATGTTTTTGCGCTCGTCAAGAGG
AGTTCATTACTCACCCTCATATCGGTCGTTTTTGAGTTCGCTCGCGTTGC
TTCAAACTCCAGCGACGCACGGCAAACGCCGCTAAGGTGCCTGTCTTTCT
TAACATATTTCCGAACAAGCCACCCCACCCATTCGCAGACGACAGGCACA
GCAAACTAGAAATTATGCCGCTGTTAAACTTCCTGTGCGCACTGAGTCCC
ATTAAAGCGGCCTCCTACCTAAACCAGACTCCCGCCACCACAGCTCCCCT
TGACACTACAGCAGgtaagcgaggcgtattcttcttgccaccctttattc
acaaggccaccaacaaattctgcaaaccctttactgcaacaaccacaaag
GACCCTCACCCACCAGCAACGGCGGTGAGAAAAAGCAAGAGGGAGGAAAG
TCCACCTGGGAAAATGCATGGGAGATGAAGCGCATGCTCAAGGTCACGgt
gagttgtgtatggtttgctgtgttgagtcagtatgccagcttgtcctatg
tagggatggctttccacgtgataacagcaaagcttgtccctggcaccaga
gaggcgtaggcatagggtgccatagctgaggtcttagggagtgaatggcc
catcctaccaggcatattcacgccttgtatcctcccctctgaaacctcac
aacgcagGAGGAGCTGATGGAGAAAGACGAGATTGCTCGAGGCGAGAATG
TACACAAGCAGCGGGAGGCAATGAAGAAGGAACAAACCCAGCGCAAGAAA
CAGGACAAAGCGGAGGCCCTTCGAACTCAGCAAGAAGCCTTTCGTAATGT
CAAGAAACAGCGAGATATAGAGgtgagtgattggggaacaatgaaaatat
actcaaagtctggtcgttcgattgtccgttgagcgtccctttggccgctt
ttgcactgctcacctggtctctcccatctccctcccacactttttcgctc
tcccacaccctttcccccaaccacacaaagCAAGAAGCCGCCCGGGCCGA
CATCCGCGAAGAATACCGTCGAGCCATGACCACCAAGAAGGAAGCTGAAG
CCGAGCAAAGGGCCACCCGACAACGGGAACGCGAAGAGAAACGACGTGCG
CTTCTCGAGGAACACCGCCGGAAGCAAGAGGAAGAGGACGGGATGAAGGC
CACGAAGCGGGCAGAAGATCAGGCACGGCTCGCAAAACGACAGGCCGAGG
TGGCGGCGGCGGAGAAGGAGAGGATAAAGAAGGTGCATATGCTGCGGGTA
TCCTTAGAGGCCCAGAAAGAGAAGAGGCGGGCTTCCCTGTACACTCCACC
AGCGGGGATGGCCAAGGGGAAGGGAGGCGGACGGCAGGAAGGATGAGAAG
GGAGGGAAGGAAGGAGGGGAGAAGGGTGGGCCATACATGTGTTTTGAATA
TATATTTTCCACTGTATTTTTCATTTACAAAAGGGATCATAAGCAGTGGC
TTGACTCGGTGGAAGTAGGAAAGATGATGGAGAGGCACTACGGGGAAGGA
AGTCACTACCTCGTCACTGGCAGACCCAGGCAGGTCAAGAGCCCAAAAGA
AGAAGGAAACGATTAATTGAACGAAAGGAAAAATAGAGCCGAT
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protein sequence of NO07G04100.1

>NO07G04100.1-protein ID=NO07G04100.1-protein|Name=NO07G04100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=243bp
MPLLNFLCALSPIKAASYLNQTPATTAPLDTTAGPSPTSNGGEKKQEGGK
STWENAWEMKRMLKVTEELMEKDEIARGENVHKQREAMKKEQTQRKKQDK
AEALRTQQEAFRNVKKQRDIEQEAARADIREEYRRAMTTKKEAEAEQRAT
RQREREEKRRALLEEHRRKQEEEDGMKATKRAEDQARLAKRQAEVAAAEK
ERIKKVHMLRVSLEAQKEKRRASLYTPPAGMAKGKGGGRQEG*
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Synonyms
Publications