NO07G04030, NO07G04030 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G04030 vs. NCBI_GenBank
Match: XP_005853362.1 (major facilitator superfamily mfs 1, partial [Nannochloropsis gaditana CCMP526] >EKU22997.1 major facilitator superfamily mfs 1, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 517.7 bits (1332), Expect = 3.500e-143 Identity = 271/440 (61.59%), Postives = 334/440 (75.91%), Query Frame = 0 Query: 1 MEASPRKRHGGA-ANIAGPGTSPSYMMELPITPVAVEAEEIVILSPS-KGFTTPLSKGGGSSGRRHHVPPFHSLRHKD--PAIVVKRARSAQELVRAKKLLRALGFFYHLSLGVLFMTFTELLLNDFDNNYANTAAFLGTCAGVERGVQFFTSPFLGNLSDSVGRRPILFMSLLLHLASLLVVAVIPTRHTVFVYFMINGGFNVTYGMINATVADLCTAQAKTGKGELAQQYGKLGMAVGLSMILGPAIGPVLQKMNVLYPVYLSLLFLVISLGLAWFTPESLDDKYRAGSIDWKKASPFYALRKSLKYRRFVFFAAPFFLSQLSEGVYHFMVLYTKVRIGWDFVALGIYISIVGICLAVVQGNLKFIVPKIISENGSVTTGLLGHAVAMGVTSMASEGWMMGLCIIPQVRIRFFFQNRAINFPSLLRTLCTFLSPSVPG 437 M+ASPRKR GA N PG PS M ELPITPV V E++VILSP+ +G TTPL G G R V PF S+ D + A++LVR KKL RALGFFYH+S GVLF TFTELLLNDF NNY+ TAAFLG CAGVERGVQFF+SP LGNLSDSVGRRPIL +SLLLH ASL+VVA++PTRH+V +YF+ING NVT GMINA VADLC+AQ KTG+GELAQQYG+LGMA+GLSMILGPAIGPVLQKMNVLYP+YLSL FL +S+ +AW ESL +RA +I+W+KA+PF+ LR+++++RRF F+ PFFL+QL+E VY F+VLYTK R GW ++ LG Y+SI+GICLA++QG+L++ VP+ +SENG VT GL GHA+AMGV S+A+ GWMMGL I+PQ+ ++ P L+ L ++P G Sbjct: 1 MDASPRKRVNGAYGNRLSPGGGPSGMTELPITPVLVNEEKVVILSPTEEGITTPLRTGDGG---RRQVTPFDSIHASDNLENQIHGHNHHAKQLVRTKKLCRALGFFYHISFGVLFTTFTELLLNDFGNNYSQTAAFLGVCAGVERGVQFFSSPVLGNLSDSVGRRPILLLSLLLHFASLMVVAILPTRHSVLIYFLINGASNVTLGMINAIVADLCSAQGKTGEGELAQQYGRLGMAIGLSMILGPAIGPVLQKMNVLYPIYLSLAFLGVSIVIAWSMAESLQACHRALNINWRKANPFFVLREAMRFRRFQLFSGPFFLNQLTECVYQFVVLYTKRRFGWGYMTLGFYVSIIGICLAIIQGSLRYFVPRFVSENGCVTVGLFGHALAMGVISVATHGWMMGLTILPQMA-------ASLKNPGLMSALAKGIAPEQQG 430
BLAST of NO07G04030 vs. NCBI_GenBank
Match: EWM30078.1 (major facilitator superfamily mfs_1 [Nannochloropsis gaditana]) HSP 1 Score: 225.3 bits (573), Expect = 3.600e-55 Identity = 128/283 (45.23%), Postives = 174/283 (61.48%), Query Frame = 0 Query: 88 QELVRAKKLLRALGFFYHLSLGVLFMTFTELLLNDFDNNYANTAAFLGTCAGVERGVQFFTSPFLGNLSDSVGRRPILFMSLLLHLASLLVVAVIPTRHTVFVYFMINGGFNVTYGMINATVADLCTAQAKTGKGELAQQYGKLGMAVGLSMILGPAIGPVLQKMNVLYPVYLSLLFLVISLGLAWFTPESLDDKYRAGSIDWKKASPFYALRKSLKYRRFVFFAAPFFLSQLSEGVYHFMVLYTKVRIGWDFVALGIYISIVGICLAVVQGNLKFIVPKIIS 371 + + RAK +R + FFYHLSL VL T+TELLL FDNN++ AAFLGTC GVERG+QF T+ LGNLSD VGRRP+LF SL+L++ S L V V P TV YF+I+G N M+NA V DL + + +G L QQYG+LGMA ESL + R I + ++P + L+K+++YR F+ FA PFFLSQLSE VY F+V+YTK R+GW +V++G+YIS++ + +A++QGNL+ IVP+ +S Sbjct: 135 ETIKRAKVSMRIIAFFYHLSLSVLVATWTELLLKGFDNNFSKAAAFLGTCQGVERGIQFLTAASLGNLSDCVGRRPVLFASLILNIISTLCVIVKPGPMTVLAYFIISGLSNCILAMLNAIVGDLAAGREEL-EGGLTQQYGRLGMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAESLPPQNR--HIKLEHSNPLWGLKKAMRYRPFLLFALPFFLSQLSESVYAFIVIYTKQRLGWSYVSVGLYISLLALTIAILQGNLRHIVPRFVS 414
BLAST of NO07G04030 vs. NCBI_GenBank
Match: EWM30079.1 (major facilitator superfamily mfs_1 [Nannochloropsis gaditana]) HSP 1 Score: 225.3 bits (573), Expect = 3.600e-55 Identity = 128/283 (45.23%), Postives = 174/283 (61.48%), Query Frame = 0 Query: 88 QELVRAKKLLRALGFFYHLSLGVLFMTFTELLLNDFDNNYANTAAFLGTCAGVERGVQFFTSPFLGNLSDSVGRRPILFMSLLLHLASLLVVAVIPTRHTVFVYFMINGGFNVTYGMINATVADLCTAQAKTGKGELAQQYGKLGMAVGLSMILGPAIGPVLQKMNVLYPVYLSLLFLVISLGLAWFTPESLDDKYRAGSIDWKKASPFYALRKSLKYRRFVFFAAPFFLSQLSEGVYHFMVLYTKVRIGWDFVALGIYISIVGICLAVVQGNLKFIVPKIIS 371 + + RAK +R + FFYHLSL VL T+TELLL FDNN++ AAFLGTC GVERG+QF T+ LGNLSD VGRRP+LF SL+L++ S L V V P TV YF+I+G N M+NA V DL + + +G L QQYG+LGMA ESL + R I + ++P + L+K+++YR F+ FA PFFLSQLSE VY F+V+YTK R+GW +V++G+YIS++ + +A++QGNL+ IVP+ +S Sbjct: 135 ETIKRAKVSMRIIAFFYHLSLSVLVATWTELLLKGFDNNFSKAAAFLGTCQGVERGIQFLTAASLGNLSDCVGRRPVLFASLILNIISTLCVIVKPGPMTVLAYFIISGLSNCILAMLNAIVGDLAAGREEL-EGGLTQQYGRLGMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAESLPPQNR--HIKLEHSNPLWGLKKAMRYRPFLLFALPFFLSQLSESVYAFIVIYTKQRLGWSYVSVGLYISLLALTIAILQGNLRHIVPRFVS 414
BLAST of NO07G04030 vs. NCBI_GenBank
Match: WP_067053884.1 (MFS transporter [Mucilaginibacter sp. L294]) HSP 1 Score: 136.7 bits (343), Expect = 1.700e-28 Identity = 96/302 (31.79%), Postives = 155/302 (51.32%), Query Frame = 0 Query: 106 LSLGVLFMTFTELLLNDFDNNYANTAAFLGTCAGVERGVQFFTSPFLGNLSDSVGRRPILFMSLLLHLASLLVVAVIPTRHTVFVYFMINGGFNVTYGMINATVADLCTAQAKTGKGELAQQYGKLGMAVGLSMILGPAIGPVLQKMNVLYPVYLSLLFLVISLGLAWF-TPESLDDKYRAGSIDWKKASPFYALRKSLKYRRFVFFAAPFFLSQL-SEGVYHFMVLYTKVRIGWDFVALGIYISIVGICLAVVQGNL-KFIVPKIISENGSVTTGLLGHAVAMGVTSMASEGWMMGLCIIP 405 + L ++ F +L+ N + + + G +QF SP +GNLSD GRRP+L SLL + +A PT +FV +I G ++ +A +AD+ + + AQ +G +G+A GL I+GP IG VL NV YP Y + +I+ +F PESLD ++R DWK+A+P +L + KY + A F+ + + V YT + W +G ++ +G +A+VQG L + ++PK I +N S+ GLL +A+ M + +A++ WMM +IP Sbjct: 25 IGLAIIIPVFPKLIETLIHGNISQASKYSGLLVMAYAIMQFLFSPLVGNLSDKYGRRPVLLFSLLGFGIDYIFMAFAPTIGWLFVGRIIAGITGASFTTASAYIADVSEPEKR------AQNFGMIGVAFGLGFIIGPFIGGVLGDFNVKYPFYAAAALALINAAYGFFILPESLDKEHRR-EFDWKRANPVGSLLQLKKYPAVIGLATCLFIIYIATHAVQSVWTYYTIEKFNWSIRTIGYSLTFIGAMIALVQGGLIRVVIPK-IGQNRSIWIGLLLYALGMLLFGLANKSWMMFAFMIP 318
BLAST of NO07G04030 vs. NCBI_GenBank
Match: WP_096352059.1 (MFS transporter [Mucilaginibacter gotjawali] >BAU54203.1 Tetracycline resistance protein, class C [Mucilaginibacter gotjawali]) HSP 1 Score: 132.5 bits (332), Expect = 3.200e-27 Identity = 99/315 (31.43%), Postives = 162/315 (51.43%), Query Frame = 0 Query: 99 ALGFFY------HLSLGVLFMTFTELLLNDFDNNYANTAAFLGTCAGVERGVQFFTSPFLGNLSDSVGRRPILFMSLLLHLASLLVVAVIPTRHTVFVYFMINGGFNVTYGMINATVADLCTAQAKTGKGELAQQYGKLGMAVGLSMILGPAIGPVLQKMNVLYPVYLSLLFLVISLGLAWF-TPESLDDKYRAGSIDWKKASPFYALRKSLKYRRFVFFAAPFFLSQLS-EGVYHFMVLYTKVRIGWDFVALGIYISIVGICLAVVQGNL-KFIVPKIISENGSVTTGLLGHAVAMGVTSMASEGWMMGLCIIP 405 ALGF + + G++ +L+ + + + ++ A + G G+QFF +P +GNLSD GRRP+L SLL A PT +FV +I G ++ NA +AD+ T + + A +G +G+A G+ ILGPA+G +L K N YP + +++ +F PESL + R + K+A+PF L + KY+ + A FL + + V YT + W +G ++ VG+ +A+VQG L + I+PK+ +E S+ GLL +AV + + AS+GWMM + ++P Sbjct: 9 ALGFIFVTIFIDVMGFGIIIPVLPDLIKHLINGDVSDAAGYAGWLLAAYAGMQFFCAPVIGNLSDKFGRRPVLLCSLLGFSIDYAFSAFAPTIGWLFVGRIIAGITGASFTTANAYIADISTPEKR------AANFGLVGVAFGIGFILGPALGGLLGKYNPHYPFIAASALALLNAAYGYFILPESLAIENRR-PFELKRANPFGTLIQLKKYKSVIDLALSLFLVYFAVQAVQSVWTYYTIQKFHWSNDIVGYSLAFVGLMIAIVQGVLIRIILPKLGNER-SIWIGLLLYAVGLAFFAFASKGWMMFVILVP 315
BLAST of NO07G04030 vs. NCBI_GenBank
Match: AIA14101.1 (Tetracycline_Resistance_MFS_Efflux_Pump [uncultured bacterium]) HSP 1 Score: 129.0 bits (323), Expect = 3.500e-26 Identity = 88/266 (33.08%), Postives = 144/266 (54.14%), Query Frame = 0 Query: 144 VQFFTSPFLGNLSDSVGRRPILFMSLLLHLASLLVVAVIPTRHTVFVYFMINGGFNVTYGMINATVADLCTAQAKTGKGELAQQYGKLGMAVGLSMILGPAIGPVLQKMNVLYPVYLSLLFLVISLGLAWFT-PESLDDKYRAGSIDWKKASPFYALRKSLKYRRFVFFAAPFFL----SQLSEGVYHFMVLYTKVRIGWDFVALGIYISIVGICLAVVQGNLKFIVPKIISENGSVTTGLLGHAVAMGVTSMASEGWMMGLCIIP 405 VQF +P +GNLSD GRRP++ SL L +A+ PT +F+ +I G ++ A +AD+ TA+ + A+ +G +G A GL I+GPA+G +L P Y + + +++ +F PESL + R +WK+A+PF +L+ +Y A FFL +Q +G ++F +Y R GW+ +GI +++VG+ + VVQG L K + SV GLL +++ + + + A+EGWMM + +IP Sbjct: 59 VQFVCAPLIGNLSDRYGRRPVILFSLFGFGIDYLFLALAPTYGLLFIGRIIAGMTGASFTTAAAYIADISTAETR------AKNFGMIGAAFGLGFIIGPALGGLLAGWGTRAPFYAAAILCLLNCLYGYFVLPESLSKENRR-KFEWKRANPFGSLQLFKRYPTIGGLAFSFFLIYLAAQAVQGNWNFFTIY---RFGWNEKMVGISLAVVGLLVGVVQGVLTGFTTKKLGNERSVYLGLLLYSLGLVLFAFATEGWMMFVFLIP 314
BLAST of NO07G04030 vs. NCBI_GenBank
Match: WP_076585785.1 (MFS transporter [Lysobacter tolerans] >SIQ25891.1 MFS transporter, DHA1 family, tetracycline resistance protein [Lysobacter tolerans]) HSP 1 Score: 129.0 bits (323), Expect = 3.500e-26 Identity = 91/290 (31.38%), Postives = 154/290 (53.10%), Query Frame = 0 Query: 119 LLNDFDNNYANTAA-FLGTCAGVERGVQFFTSPFLGNLSDSVGRRPILFMSLLLHLASLLVVAVIPTRHTVFVYFMINGGFNVTYGMINATVADLCTAQAKTGKGELAQQYGKLGMAVGLSMILGPAIGPVLQKMNVLYPVYLSLLFLVISLGLAWFT-PESLDDKYRAGSIDWKKASPFYALRKSLKYRRFVFFAAPFFLSQLSEGVY-HFMVLYTKVRIGWDFVALGIYISIVGICLAVVQG-NLKFIVPKIISENGSVTTGLLGHAVAMGVTSMASEGWMMGLCIIP 405 L+ +F TAA ++G V +QFF++P G LSD GRRP++ +S L +++A+ P+ +FV +I+ + ++ NA +AD+ A+ + G +G +GMA G+ I+GP +G L ++ YP + + + +++ F PESL + R+ +WK+A+P +++ +Y + V AA LS L+ VY VLY R GW + +G +++VG+C A+VQG ++ IVPK E ++ GL+ + A GW+ LC IP Sbjct: 38 LVEEFVGGDTRTAAWWVGIFGTVFAAIQFFSAPIQGALSDRYGRRPVILLSCLGLGLDFILMALAPSLMWLFVARVISAMTSASFTTANAYIADVTPAEKRAG------AFGMVGMAFGVGFIIGPMLGGWLGHFDLRYPFWGAAILALLNFCYGLFVLPESLPPERRSARFEWKQANPIGSIKLIRQYPQLVGLAAILLLSNLAHYVYPSVFVLYADYRYGWGPMTVGQVLAVVGVCSALVQGLVVRRIVPK-FGETNTLVLGLMAGTLGFAAYGAAPLGWLF-LCAIP 319
BLAST of NO07G04030 vs. NCBI_GenBank
Match: WP_076450746.1 (MFS transporter [Chryseobacterium piscicola] >SIS73879.1 MFS transporter, DHA1 family, tetracycline resistance protein [Chryseobacterium piscicola] >PQA97666.1 tetracycline resistance MFS efflux pump [Chryseobacterium piscicola]) HSP 1 Score: 127.1 bits (318), Expect = 1.300e-25 Identity = 98/315 (31.11%), Postives = 156/315 (49.52%), Query Frame = 0 Query: 99 ALGFFY------HLSLGVLFMTFTELLLNDFDNNYANTAAFLGTCAGVERGVQFFTSPFLGNLSDSVGRRPILFMSLLLHLASLLVVAVIPTRHTVFVYFMINGGFNVTYGMINATVADLCTAQAKTGKGELAQQYGKLGMAVGLSMILGPAIGPVLQKMNVLYPVYLSLLFLVISLGLAWF-TPESLDDKYRAGSIDWKKASPFYALRKSLKYRRFVFFAAPFFLSQL-SEGVYHFMVLYTKVRIGWDFVALGIYISIVGICLAVVQGNL-KFIVPKIISENGSVTTGLLGHAVAMGVTSMASEGWMMGLCIIP 405 A+GF + + LG++ +L+ A + G A QF SP +GNLSD GRRPI+ +SLL + +A+ P +F+ +I G ++ +A +AD+ T + + A+ +G +G A GL I+GP +G VL P Y + + +I+ +F PESLD R DWK+A+P +L+ +K+ FL + S V +T WD + +GI + +VG+ +A+VQG L ++ PK + E S+ GL +AV M + S A+EGWMM + +IP Sbjct: 9 AIGFIFVTLLIDVIGLGIIIPVIPKLIEELIHGGITEAAKYGGWLAFAYAFTQFIFSPVIGNLSDKYGRRPIILISLLGFAVDYIFLALAPNIWLLFLGRVIAGITGASFTTASAYIADISTDE------DRAKNFGLIGAAFGLGFIVGPLLGGVLGHFGARVPFYAAAVLCLINFLYGYFILPESLDKSQRR-EFDWKRANPIGSLKFLMKHPELSGLVVSLFLIYIASHAVQTNWNYFTMSEFKWDELMVGISLGVVGLLIALVQGVLIRYTTPK-LGEYKSIYIGLALYAVGMLLFSFATEGWMMFVILIP 315
BLAST of NO07G04030 vs. NCBI_GenBank
Match: WP_107828972.1 (MFS transporter [Mucilaginibacter yixingensis] >PTQ97037.1 DHA1 family tetracycline resistance protein-like MFS transporter [Mucilaginibacter yixingensis]) HSP 1 Score: 126.7 bits (317), Expect = 1.800e-25 Identity = 96/316 (30.38%), Postives = 157/316 (49.68%), Query Frame = 0 Query: 98 RALGFFYH------LSLGVLFMTFTELLLNDFDNNYANTAAFLGTCAGVERGVQFFTSPFLGNLSDSVGRRPILFMSLLLHLASLLVVAVIPTRHTVFVYFMINGGFNVTYGMINATVADLCTAQAKTGKGELAQQYGKLGMAVGLSMILGPAIGPVLQKMNVLYPVYLSLLFLVISLGLAWFT-PESLDDKYRAGSIDWKKASPFYALRKSLKYRRFVFFAAPFFLSQL-SEGVYHFMVLYTKVRIGWDFVALGIYISIVGICLAVVQGNL-KFIVPKIISENGSVTTGLLGHAVAMGVTSMASEGWMMGLCIIP 405 +A+GF + + L ++ L+ + + + G G +QF SP +GNLSD GRRP+L SLL A PT +F+ ++ G ++ +A ++D+ T + K A +G +G+A GL I+GP IG L K N+ YP + +I+ +F PESLD +R DWK+A+P L++ KY+ + A FL ++ V YT + GW+ G + +VG+ A+VQG L + +PK+ E S+ GLL +++ + + + AS+GWMM + +IP Sbjct: 11 KAMGFIFATLLIDVMGLAIIIPVVPGLIEQLIHGDVSTATRYSGWLTGCYAIMQFIFSPIIGNLSDRYGRRPVLLCSLLGFSVDYFFSAFAPTIGWLFIGRIVAGITGASFTTASAYISDVSTPEKK------AANFGLIGVAFGLGFIIGPVIGGFLGKYNIHYPFIGAGALALINAVYGYFALPESLDQAHRR-KFDWKRANPVGTLKQLTKYKSVMGLAISLFLIYFAAQAVQSVWTFYTIKKFGWNTDWQGYSLGVVGLLTAMVQGGLIRVTLPKLGHER-SIWMGLLLYSLGLLLFAFASKGWMMFIFLIP 318
BLAST of NO07G04030 vs. NCBI_GenBank
Match: PTX33828.1 (DHA1 family tetracycline resistance protein-like MFS transporter [Pedobacter sp. YR016]) HSP 1 Score: 126.7 bits (317), Expect = 1.800e-25 Identity = 92/302 (30.46%), Postives = 155/302 (51.32%), Query Frame = 0 Query: 106 LSLGVLFMTFTELLLNDFDNNYANTAAFLGTCAGVERGVQFFTSPFLGNLSDSVGRRPILFMSLLLHLASLLVVAVIPTRHTVFVYFMINGGFNVTYGMINATVADLCTAQAKTGKGELAQQYGKLGMAVGLSMILGPAIGPVLQKMNVLYPVYLSLLFLVISLGLAWFT-PESLDDKYRAGSIDWKKASPFYALRKSLKYRRF-VFFAAPFFLSQLSEGVYHFMVLYTKVRIGWDFVALGIYISIVGICLAVVQGNL-KFIVPKIISENGSVTTGLLGHAVAMGVTSMASEGWMMGLCIIP 405 + +G++ F +L+ N + + + G +QF +P +GNLSD GRRP+L +SLL + +A+ PT +FV +I G F + A +AD+ T K AQ +G +G A G+ I+GPA+G +L ++ P + + +++ +F PESLD ++R + +W++A+P +L + KY+ A FL S V + W +GI +++VG+ +A VQG L +FI PK+ +E S+ G L +AV + + + ASE WMM ++P Sbjct: 34 IGIGLIIPVFPQLIEQLIGGNISQASQWSGWLTFAYAIMQFVCAPIIGNLSDKYGRRPVLLLSLLGFGIDYIFLALAPTIWWLFVGRIIAGVFGASMTTATAYIADIST------KENRAQNFGMIGAAFGVGFIIGPALGGLLGEIGPRVPFVAAAILTFVNVIYGYFVLPESLDKEHRR-AFEWRRANPLGSLMQLRKYKGLGGLIIALVFLYIASHSVQSTWTFINIEKFNWSTSMIGISLTVVGVLVAAVQGGLIRFINPKLGNEK-SIYVGFLLYAVGLFLFAFASESWMMFAFLVP 327 The following BLAST results are available for this feature:
BLAST of NO07G04030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G04030 ID=NO07G04030|Name=NO07G04030|organism=Nannochloropsis oceanica|type=gene|length=2882bpback to top protein sequence of NO07G04030.2 >NO07G04030.2-protein ID=NO07G04030.2-protein|Name=NO07G04030.2|organism=Nannochloropsis oceanica|type=polypeptide|length=438bpback to top protein sequence of NO07G04030.1 >NO07G04030.1-protein ID=NO07G04030.1-protein|Name=NO07G04030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=620bpback to top Synonyms
Publications
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