NO07G04010, NO07G04010 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO07G04010 vs. NCBI_GenBank
Match: XP_012199074.1 (hypothetical protein SPRG_19824 [Saprolegnia parasitica CBS 223.65] >KDO30275.1 hypothetical protein SPRG_19824 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 77.4 bits (189), Expect = 2.300e-10 Identity = 58/171 (33.92%), Postives = 86/171 (50.29%), Query Frame = 0 Query: 185 VEFRPKARVPII-YTKHISGLEVDIRVAPPDHAAIS--LLRQLSAMHPCFAPVATALKVLLHQGKMDKPFDGGLGSYKLYLLLGKFIKYYYKGDRDDAGAVLLAFLLHFSFLEPLTKKQHGGGKRPFTFSFLPSLPSLPI----DLGPAFRYADLRHLFHRAAVSLQDAEK 349 V R +A+VPII H+S LEVDI + D ++S +++ +A +P F PV LK LHQ ++KPF+GGLGSY+LY+++G I + +A VL F +FS G G+ T +P + + FR + LF AA +L+ A K Sbjct: 277 VHVRGRAKVPIINLVHHVSKLEVDISMG-VDKTSVSDQVIQWFAATYPVFNPVIVLLKEFLHQSGLNKPFEGGLGSYRLYVMVGHVINIV--DEPSNAWRVLNLFFEYFS----------GAGRFQTTTVLRLQIPRTNLRCEAEFKSIFRLRECNTLFALAAETLRSAIK 434
BLAST of NO07G04010 vs. NCBI_GenBank
Match: GAX19474.1 (hypothetical protein FisN_19Hh049 [Fistulifera solaris]) HSP 1 Score: 75.5 bits (184), Expect = 8.600e-10 Identity = 43/108 (39.81%), Postives = 62/108 (57.41%), Query Frame = 0 Query: 185 VEFRPKARVPIIYTKHISGLEVDIRVAPPDHAAIS-LLRQLSAMHPCFAPVATALKVLLHQGKMDKPFDGGLGSYKLYLLLGKFI-KYYYKGDRDDAGAVLLAFLLHF 291 V F KARVPI+ G+EVD+ + + S + S ++ FA V LK LLHQ ++D P+ GGLGSYKLY+L+ I ++ G +D+ G VL++F F Sbjct: 419 VTFITKARVPILKMDTTLGVEVDVAIGGHNGTDTSQFAAKQSELYKSFATVVLFLKALLHQHRLDVPYTGGLGSYKLYVLVAYHIQQHLLAGGQDEPGEVLMSFFFRF 526
BLAST of NO07G04010 vs. NCBI_GenBank
Match: XP_008619329.1 (hypothetical protein SDRG_14947 [Saprolegnia diclina VS20] >EQC27230.1 hypothetical protein SDRG_14947 [Saprolegnia diclina VS20]) HSP 1 Score: 74.3 bits (181), Expect = 1.900e-9 Identity = 44/110 (40.00%), Postives = 66/110 (60.00%), Query Frame = 0 Query: 185 VEFRPKARVPII-YTKHISGLEVDIRVAPPDHAAIS--LLRQLSAMHPCFAPVATALKVLLHQGKMDKPFDGGLGSYKLYLLLGKFIKYYYKGDRDDAGAVLLAFLLHFS 292 + R +A+VPII H+S LEVDI + D ++S ++R +A +P F PV LK LHQ ++KPF+GGLGSY+LY+++G I + +A VL F ++S Sbjct: 280 IHVRGRAKVPIINLVHHVSKLEVDISMG-VDKTSVSDQVIRWFAATYPVFNPVIVLLKEFLHQSGLNKPFEGGLGSYRLYVMVGHVINVV--DEPSNAWRVLNLFFEYYS 386
BLAST of NO07G04010 vs. NCBI_GenBank
Match: OQR95256.1 (hypothetical protein ACHHYP_00161 [Achlya hypogyna]) HSP 1 Score: 74.3 bits (181), Expect = 1.900e-9 Identity = 45/110 (40.91%), Postives = 65/110 (59.09%), Query Frame = 0 Query: 185 VEFRPKARVPIIYTKH-ISGLEVDIRVAPPDHAAIS--LLRQLSAMHPCFAPVATALKVLLHQGKMDKPFDGGLGSYKLYLLLGKFIKYYYKGDRDDAGAVLLAFLLHFS 292 V+ R +A+VPII H +S LEVDI + D ++S ++ +A +P F PV LK LHQ + KPF+GG+GSY+LY+++G I + +A VL F HFS Sbjct: 297 VDVRGRAKVPIINLVHFVSRLEVDISMG-VDKTSVSDQVIAWYAATYPVFNPVVVLLKEFLHQSGLSKPFEGGIGSYRLYVMVGHVINLV--DEPSNAWRVLNLFFEHFS 403
BLAST of NO07G04010 vs. NCBI_GenBank
Match: XP_008866029.1 (hypothetical protein H310_03799 [Aphanomyces invadans] >ETW04591.1 hypothetical protein H310_03799 [Aphanomyces invadans]) HSP 1 Score: 73.9 bits (180), Expect = 2.500e-9 Identity = 53/177 (29.94%), Postives = 83/177 (46.89%), Query Frame = 0 Query: 174 RLIEEAHAFIDVEFRPKARVPIIYTKH-ISGLEVDIRV-----APPDHAAISLLRQLSAMHPCFAPVATALKVLLHQGKMDKPFDGGLGSYKLYLLLGKFIKYYYKGDRDDAGAVLLAFLLHFSFLEPLTKKQHGGGKRPFTFSFLPSLPSLPIDLGPAFRYADLRHLFHRAAVSLQ 345 R + +AH +E R A+VPII H S +EVD+ V +P D ++ +A HP F + LK L+Q ++KP++GG+GS++LY ++ + RD A +LL F F + + + P P L ++ FR D +LFH+A LQ Sbjct: 296 RALRQAHPSFSIEVRRLAKVPIINVIHRTSNIEVDVSVGMEKPSPGD----QIVAWYAAHHPEFNTLVVLLKEFLYQNGINKPYEGGIGSFRLYCMVTHVVA--ASNPRDGAATLLLRFFERFGCAKTFNNRTVLRLRLP---EHDPPL-KCDVEFTSIFRLRDCNYLFHQAFERLQ 462
BLAST of NO07G04010 vs. NCBI_GenBank
Match: XP_009837214.1 (hypothetical protein H257_11854 [Aphanomyces astaci] >ETV73339.1 hypothetical protein H257_11854 [Aphanomyces astaci]) HSP 1 Score: 68.6 bits (166), Expect = 1.100e-7 Identity = 51/181 (28.18%), Postives = 80/181 (44.20%), Query Frame = 0 Query: 174 RLIEEAHAFIDVEFRPKARVPII-YTKHISGLEVDIRVAPPDHA-AISLLRQLSAMHPCFAPVATALKVLLHQGKMDKPFDGGLGSYKLYLLLGKFIKYYYKGDRDDAGAVLLAFLLHFSFLEPLTKKQHGGGKRPFTFSFLPSLPSL--PIDLGPAFRYADLRHLFHRAAVSLQDAEKHR 351 R + +AH VE R A+VPII S +EVD+ + + ++ +A HP F + LK L+Q ++KP++GG+GS++LY ++ + + +R A+LL F HF Q + P L ++ FR D LF A+ LQD R Sbjct: 304 RSLRQAHPSFQVEVRRLAKVPIINVVDPTSKIEVDVSLGMENPTPGDRIVAWYAANHPAFNILVVLLKEFLYQNAINKPYEGGIGSFRLYCMVTHVLATTPRKERGAPAALLLRFFQHFGC------SQKFNNRTVLKLDLPHHDPPLRCEVEFQSIFRIRDCNVLFGEASKRLQDGMNAR 478
BLAST of NO07G04010 vs. NCBI_GenBank
Match: EJK75281.1 (hypothetical protein THAOC_02999 [Thalassiosira oceanica]) HSP 1 Score: 67.4 bits (163), Expect = 2.300e-7 Identity = 67/239 (28.03%), Postives = 101/239 (42.26%), Query Frame = 0 Query: 185 VEFRPKARVPIIYTKHISGLEVDIRVAPPD-------HAAISLL---------------RQLSAMHPCFAPVATALKVLLHQGKMDKPFDGGLGSYKLYLLLGKFI-KYYYKGDRDDAGAVLLAFLLHFSFL--EPLTKKQHGGGKRPFTFSFLPSLPSLPIDLGPAFRYADLRHLFHRAAVSLQDAEKHRSLXXXXXXXXXXXXXXKPARAVLSRLSFMIDGRECARMREGAREGLVR 399 +E R KARVPII I G E DI V + ++ IS L + +A F P+ +K+L+ Q +DKPF GGLGS+KLY+L+ I K+ +G RD +L + L + + L KR + + ++ DL P F+ LF+ + L + + R+ RLSF+ +C R+RE ARE +R Sbjct: 554 IECRSKARVPIINCSTICGFEGDICVGGHNGETFMISYSIISSLTAFLDVAGTDTSMYAQSQAARFDSFGPIVLIMKILMSQQNLDKPFIGGLGSFKLYVLVAHHIEKHIKQGGRDRPSEILFSLLYRYGCKKNDKLATDLLSLQKRGSSIACDKAI----CDLVPVFKLEQCVALFNECHLRLSE---------------------RLRRSSQQRLSFLSSFIDCHRLRE-ARECSMR 766 The following BLAST results are available for this feature:
BLAST of NO07G04010 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 7
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G04010 ID=NO07G04010|Name=NO07G04010|organism=Nannochloropsis oceanica|type=gene|length=4660bpback to top protein sequence of NO07G04010.1 >NO07G04010.1-protein ID=NO07G04010.1-protein|Name=NO07G04010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=816bpback to top Synonyms
Publications
|