NO07G03940, NO07G03940 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G03940 vs. NCBI_GenBank
Match: XP_002773936.1 (13 KDA deflagellation-inducible protein, putative [Perkinsus marinus ATCC 50983] >EER05752.1 13 KDA deflagellation-inducible protein, putative [Perkinsus marinus ATCC 50983]) HSP 1 Score: 109.4 bits (272), Expect = 1.100e-20 Identity = 60/102 (58.82%), Postives = 77/102 (75.49%), Query Frame = 0 Query: 27 QGQALQLYNTELVQALRELKDKRDALSQQIRMEEETRIQLQHEAAAIGARLQRIDGSLHEKIQTRNVYDRTIGETEAAYRKILESSQTLLHVLKRESGHLLR 129 QG LQ YN+ELV+ + +L++KR+ L++QI EEE + ++Q E A + RLQRI+ SL K Q RN YD+TI ETEAAY KILESSQTLLHVLKRES +L + Sbjct: 4 QGSTLQNYNSELVKCIEDLREKREELNRQILKEEEDKGKIQKELAVLTDRLQRINESLVRKTQARNEYDKTIQETEAAYMKILESSQTLLHVLKRESVNLTK 105
BLAST of NO07G03940 vs. NCBI_GenBank
Match: XP_006640555.1 (PREDICTED: Sjoegren syndrome nuclear autoantigen 1 [Lepisosteus oculatus]) HSP 1 Score: 107.1 bits (266), Expect = 5.200e-20 Identity = 58/108 (53.70%), Postives = 78/108 (72.22%), Query Frame = 0 Query: 27 QGQALQLYNTELVQALRELKDKRDALSQQIRMEEETRIQLQHEAAAIGARLQRIDGSLHEKIQTRNVYDRTIGETEAAYRKILESSQTLLHVLKRESGHLLRSGSSSK 135 QG ALQ YN ELV+ + EL KRD L++QI EEE +++LQ++ + +L R++ SL K+ +RN +DRTI ETEAAY KILESSQTLL VLKRE+G+L ++ K Sbjct: 4 QGAALQTYNNELVKCIEELCAKRDELNRQIEQEEEEKVRLQNDIRILTEKLSRVNESLARKLASRNDFDRTIAETEAAYMKILESSQTLLSVLKREAGNLGKAADPRK 111
BLAST of NO07G03940 vs. NCBI_GenBank
Match: XP_015272276.1 (PREDICTED: Sjoegren syndrome nuclear autoantigen 1 [Gekko japonicus]) HSP 1 Score: 107.1 bits (266), Expect = 5.200e-20 Identity = 56/103 (54.37%), Postives = 80/103 (77.67%), Query Frame = 0 Query: 27 QGQALQLYNTELVQALRELKDKRDALSQQIRMEEETRIQLQHEAAAIGARLQRIDGSLHEKIQTRNVYDRTIGETEAAYRKILESSQTLLHVLKRESGHLLRS 130 QG ALQ YN ELV+ + +L KRD L++QIR+EEE +++LQ+E + +L RI+ +L K+ +RN +D+TI ETEAAY KILESSQTLL+VLK+E+G+L ++ Sbjct: 4 QGAALQSYNNELVKCIEDLCVKRDELNKQIRLEEEEKVKLQNEIRLLTEKLARINENLARKMASRNEFDKTIAETEAAYMKILESSQTLLNVLKKEAGNLTKA 106
BLAST of NO07G03940 vs. NCBI_GenBank
Match: XP_015687152.1 (PREDICTED: Sjoegren syndrome nuclear autoantigen 1 [Protobothrops mucrosquamatus]) HSP 1 Score: 106.7 bits (265), Expect = 6.800e-20 Identity = 59/106 (55.66%), Postives = 78/106 (73.58%), Query Frame = 0 Query: 27 QGQALQLYNTELVQALRELKDKRDALSQQIRMEEETRIQLQHEAAAIGARLQRIDGSLHEKIQTRNVYDRTIGETEAAYRKILESSQTLLHVLKRESGHLLRSGSS 133 QG ALQ YN ELV+ + EL KRD LS+QIR EEE + +LQ + + RL RI+ +L K+ TRN +D+TI ETEAAY K+LESSQTLL+VLK+E+G+L ++ S Sbjct: 4 QGAALQSYNNELVKCIEELCAKRDELSRQIRQEEEEKGKLQGDLRVLTERLARINETLAHKMATRNEFDKTIAETEAAYMKVLESSQTLLNVLKKEAGNLAKATES 109
BLAST of NO07G03940 vs. NCBI_GenBank
Match: OLP94736.1 (13 kDa deflagellation-inducible protein [Symbiodinium microadriaticum]) HSP 1 Score: 106.3 bits (264), Expect = 8.900e-20 Identity = 63/115 (54.78%), Postives = 83/115 (72.17%), Query Frame = 0 Query: 27 QGQALQLYNTELVQALRELKDKRDALSQQIRMEEETRIQLQHEAAAIGARLQRIDGSLHEKIQTRNVYDRTIGETEAAYRKILESSQTLLHVLKRESGHLLRS-GSSSKE--GFG 139 QG LQ YN ELV+++ +L++KR+ L++QI EEE + ++Q E + + RLQ+I+ SL K Q RN YD+TI ETEAAY KILESSQTLLHVLKRE+ L+S G +E GFG Sbjct: 1975 QGATLQNYNNELVKSIEDLREKREELNRQILKEEEDKAKIQKELSILTDRLQKINESLVRKTQARNEYDKTIQETEAAYMKILESSQTLLHVLKRETVTRLQSCGEPDEEEVGFG 2089
BLAST of NO07G03940 vs. NCBI_GenBank
Match: XP_012672046.1 (PREDICTED: Sjoegren syndrome nuclear autoantigen 1 [Clupea harengus]) HSP 1 Score: 105.1 bits (261), Expect = 2.000e-19 Identity = 55/103 (53.40%), Postives = 73/103 (70.87%), Query Frame = 0 Query: 27 QGQALQLYNTELVQALRELKDKRDALSQQIRMEEETRIQLQHEAAAIGARLQRIDGSLHEKIQTRNVYDRTIGETEAAYRKILESSQTLLHVLKRESGHLLRS 130 QG ALQ YN ELV+ + EL KRD L +QI EEE + +LQH+ + +L R++ SL ++ R +DRTI ETEAAY KILESSQTLL VLK+E+G+L ++ Sbjct: 4 QGAALQTYNNELVKCIEELSSKRDELQRQITQEEEEKARLQHDVRVLTEKLSRVNESLARRLAARADFDRTIAETEAAYMKILESSQTLLSVLKKETGNLTKA 106
BLAST of NO07G03940 vs. NCBI_GenBank
Match: XP_013878031.1 (PREDICTED: Sjoegren syndrome nuclear autoantigen 1 [Austrofundulus limnaeus]) HSP 1 Score: 105.1 bits (261), Expect = 2.000e-19 Identity = 55/103 (53.40%), Postives = 74/103 (71.84%), Query Frame = 0 Query: 27 QGQALQLYNTELVQALRELKDKRDALSQQIRMEEETRIQLQHEAAAIGARLQRIDGSLHEKIQTRNVYDRTIGETEAAYRKILESSQTLLHVLKRESGHLLRS 130 QG ALQ YN ELV+ + EL KR+ LS+QIR EE+ + +LQH+ + +L R+D SL ++ R DRTI ETEAAY KILESSQ+LL VLK+E+G+L ++ Sbjct: 4 QGAALQTYNNELVKCIEELCSKREELSRQIRQEEDEKERLQHDVRVLSEKLSRVDESLARRLAARTALDRTIAETEAAYAKILESSQSLLSVLKQEAGNLSKA 106
BLAST of NO07G03940 vs. NCBI_GenBank
Match: CBN79967.1 (Deflagellation inducible protein,13 kDa [Ectocarpus siliculosus]) HSP 1 Score: 104.8 bits (260), Expect = 2.600e-19 Identity = 55/107 (51.40%), Postives = 78/107 (72.90%), Query Frame = 0 Query: 27 QGQALQLYNTELVQALRELKDKRDALSQQIRMEEETRIQLQHEAAAIGARLQRIDGSLHEKIQTRNVYDRTIGETEAAYRKILESSQTLLHVLKRESGHLLRSGSSS 134 QG LQ YN ELV+ + +L++KR+ +++QI EEE + ++Q + + + RL +I+ SL K+Q RN YDRT+ ETEAAY KILESSQTLLHVLKRE+ +L + +S Sbjct: 10 QGATLQNYNNELVKCIEDLREKREEVNRQILKEEEEKAKIQKDLSILTDRLSKINESLARKVQARNEYDRTVQETEAAYMKILESSQTLLHVLKRETVNLTKKKQAS 116
BLAST of NO07G03940 vs. NCBI_GenBank
Match: XP_005818687.1 (hypothetical protein GUITHDRAFT_122093 [Guillardia theta CCMP2712] >EKX31707.1 hypothetical protein GUITHDRAFT_122093 [Guillardia theta CCMP2712]) HSP 1 Score: 104.8 bits (260), Expect = 2.600e-19 Identity = 57/107 (53.27%), Postives = 78/107 (72.90%), Query Frame = 0 Query: 27 QGQALQLYNTELVQALRELKDKRDALSQQIRMEEETRIQLQHEAAAIGARLQRIDGSLHEKIQTRNVYDRTIGETEAAYRKILESSQTLLHVLKRESGHLLRSGSSS 134 QG +LQ YN ELV+ + +LK+KR+ +++QI +EE + ++Q++ + RL RI+ SL K+ +RN YD+TI ETEAAY KILESSQTLLHVLKRES L + SS Sbjct: 4 QGASLQNYNNELVKCIEDLKEKREEVNRQILKDEEEKQKIQNDLRILTERLSRINDSLARKVASRNEYDKTIMETEAAYMKILESSQTLLHVLKRESVSLTKKKQSS 110
BLAST of NO07G03940 vs. NCBI_GenBank
Match: XP_017315475.1 (PREDICTED: Sjoegren syndrome nuclear autoantigen 1 [Ictalurus punctatus]) HSP 1 Score: 104.8 bits (260), Expect = 2.600e-19 Identity = 56/103 (54.37%), Postives = 75/103 (72.82%), Query Frame = 0 Query: 27 QGQALQLYNTELVQALRELKDKRDALSQQIRMEEETRIQLQHEAAAIGARLQRIDGSLHEKIQTRNVYDRTIGETEAAYRKILESSQTLLHVLKRESGHLLRS 130 QG ALQ YN ELV+ + EL KRD L++QI+ EEE + +LQH+ + +L R+ SL ++ TR+ DRTI ETEAAY KILESSQTLL VLK+E+G+L ++ Sbjct: 4 QGAALQTYNNELVKCIEELFLKRDELNKQIQQEEEEKTRLQHDIRVLTEKLNRVSESLDHRLTTRSELDRTIAETEAAYMKILESSQTLLSVLKKETGNLSKA 106 The following BLAST results are available for this feature:
BLAST of NO07G03940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G03940 ID=NO07G03940|Name=NO07G03940|organism=Nannochloropsis oceanica|type=gene|length=579bpback to top protein sequence of NO07G03940.1 >NO07G03940.1-protein ID=NO07G03940.1-protein|Name=NO07G03940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=159bpback to top Synonyms
Publications
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