NO07G03850, NO07G03850 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO07G03850 vs. NCBI_GenBank
Match: EWM26974.1 (hypothetical protein Naga_100127g14 [Nannochloropsis gaditana]) HSP 1 Score: 222.6 bits (566), Expect = 3.500e-54 Identity = 182/586 (31.06%), Postives = 216/586 (36.86%), Query Frame = 0 Query: 77 LCKPGVFNRDLSAQTAATLT----DDEDEGSTCTTEGGLSSSTQSLVGDDAALLLGLGGCLDLLAGSLRIEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDIRNHYACKLGIRDIRSSNSGLCPSLPQWRRASCLPEGVLPVIEKLKGRRESYGGFLRLMKRPSXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSVFAPSLLPSEGFECPSCQALQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLSPSTAAAYTFCGSCSQSSPPLPSLLPFHHPIGSPPCHNMRNGRRIGGLKRGTNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFPPSSIPKEQ------SPYSHSRRRIVFHEDVCVVHIPSHTQYSSRVKSQYWTSPEEIYEMACRNLVEFEAEGYSWQRTLEEDQLFWCPDTGSFVHPAHVCMEEGDRGQAGREGG 653 +CKP RD S TAA++T T E G +S T+SL+ DDAA L GLGGCLDLLA S Q+IR HYA KLGIR + + + QW R SCLPEGV PVIEKLKG+ ESYGGFLRLM+R + S + S L S P+C A S S A+ Y C SCS++SP P L F +P+G+ HN+R+GRR+GGLKR + PP + Q SP SRRRI FHEDVCVVHIPSHT+YS R+KSQYWTSP EIYEMACRNLVEFEAEGYSW+ LEE+ L+WCPDT SFVHPAH+ ME + + GR G Sbjct: 44 MCKPCFLTRDASVNTAASITXXXXXXXXXXXXXTLERGGASMTRSLLEDDAATLFGLGGCLDLLANS---------------------KHRLGARLTSRTGCEVVEKDSTTLPAWAPLPAPPPQLWRQRSAQEIRKHYAVKLGIRTMGTGHLVAGLKASQW-RTSCLPEGVRPVIEKLKGQPESYGGFLRLMRRQTLVGKGQQAPTEGSAPTAYPT---------SHESRSSLSSTDDRAPACAA------------------------CLALPSDRAPKQRALPVPVPGRASVDGAIQLRPAMDYVGGSGGDDESDGCGSFSSSEASGYLSCSSCSRTSPSFP-LPAFQYPLGTGAPHNIRDGRRVGGLKREPKLAVPQVSHSAGESGTGKALPSPSSLPPSSFPSPSTSSFAMRCLMDAANSPAASTSVGAMSLTPASCSFLSRASS-----------------------PPHAHTDRQASRLAVSPAPLSRRRIAFHEDVCVVHIPSHTEYSRRIKSQYWTSPAEIYEMACRNLVEFEAEGYSWEAALEEEHLYWCPDTASFVHPAHIMMEGQEDWREGRREG 550
BLAST of NO07G03850 vs. NCBI_GenBank
Match: CBN78142.1 (hypothetical protein Esi_0100_0046 [Ectocarpus siliculosus]) HSP 1 Score: 86.7 bits (213), Expect = 3.000e-13 Identity = 37/93 (39.78%), Postives = 57/93 (61.29%), Query Frame = 0 Query: 552 EQSPYSHSRRRIVFHEDVCVVHIPSHTQYSSRVKSQYWTSPEEIYEMACRNLVEFEAEGYSWQRTLEEDQLFWCPDTGSFVHPAHVCMEEGDR 645 E +P H + + F V V++P H++YS RV+ YW S EI EM RN++EF+AE Y+W+ EE+ +++C +TG F+HP +E R Sbjct: 469 EFAPCRH--KHVDFAPVVSAVYVPVHSEYSDRVRRSYWNSAGEIREMVYRNMIEFDAEEYNWENVAEEEDMYFCEETGEFIHPIFFDSQEEAR 559
BLAST of NO07G03850 vs. NCBI_GenBank
Match: XP_002179441.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49264.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 82.4 bits (202), Expect = 5.700e-12 Identity = 37/90 (41.11%), Postives = 60/90 (66.67%), Query Frame = 0 Query: 551 KEQSPYSHSRR---RIVFHEDVCVVHIPSHTQYSSRVKSQYWTSPEEIYEMACRNLVEFEAEGYSWQRTLEEDQLFWCPDTGSFVHPAHV 638 K SP +H+RR +IVF ++V V+ IP+ +YS R+KS+ W++ E+ E A RN +EF AEG++W+ E++ ++ C +G VHP H+ Sbjct: 84 KSDSPMAHTRRKSQKIVFVDEVEVLPIPTRYEYSDRIKSRIWSNRYELQENAERNALEFAAEGWNWRNVTEDEGMYICSVSGELVHPIHL 173
BLAST of NO07G03850 vs. NCBI_GenBank
Match: XP_002289929.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93466.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 81.3 bits (199), Expect = 1.300e-11 Identity = 44/105 (41.90%), Postives = 66/105 (62.86%), Query Frame = 0 Query: 547 SSIPKEQSPYSH--SRRRIVFHEDVCVVHIPSHTQYSSRVKSQYWTSPEEIYEMACRNLVEFEAEGYSWQRTL-EEDQLFWCPDTGSFVHPAHVCMEEGDRGQAG 649 S +PK ++H RRR+VF +DV VV IP ++YS+R+K + +++ E+ E A RN+VEFEAEG+ L +E Q + CP TG +HP H+ +G G+ G Sbjct: 238 SKLPKN---FTHIPRRRRLVFSDDVVVVPIPMRSEYSNRIKERMYSNRVELSENAQRNVVEFEAEGWDASTVLDDEGQFYKCPLTGELIHPVHLAYFKG-AGEGG 338
BLAST of NO07G03850 vs. NCBI_GenBank
Match: GAX21839.1 (hypothetical protein FisN_30Hh039 [Fistulifera solaris]) HSP 1 Score: 81.3 bits (199), Expect = 1.300e-11 Identity = 37/103 (35.92%), Postives = 61/103 (59.22%), Query Frame = 0 Query: 545 PPSSIPKEQSPYSHSRRRIVFHEDVCVVHIPSHTQYSSRVKSQYWTSPEEIYEMACRNLVEFEAEGYSWQRTLEEDQLFWCPDTGSFVHPAHVCMEEGDRGQA 648 P S SP R + F+E V V+ IP +YS +V+S+ W++ E+ + A RN+VEF AEG++W+ +E+++++ C +G +HP H C + D QA Sbjct: 55 PTCSDETRHSPKRRKRHSLQFNESVTVMAIPMRNEYSRQVRSKLWSNRLELQQNAARNVVEFAAEGWNWRTVVEDERMYVCAFSGQRIHPCH-CDPDFDNNQA 156
BLAST of NO07G03850 vs. NCBI_GenBank
Match: GAX19846.1 (hypothetical protein FisN_11Lh280 [Fistulifera solaris]) HSP 1 Score: 80.1 bits (196), Expect = 2.800e-11 Identity = 37/92 (40.22%), Postives = 54/92 (58.70%), Query Frame = 0 Query: 546 PSSIPKEQSPYSHSRRRIVFHEDVCVVHIPSHTQYSSRVKSQYWTSPEEIYEMACRNLVEFEAEGYSWQRTLEEDQLFWCPDTGSFVHPAHV 638 P I S R+I F ++V VV IP+ +YS R+KS+ W++ E+ E A RN +EF AEG+ W+ E+D +F C +G VHP H+ Sbjct: 86 PLKIDCTTSVNEKKSRKIAFQDEVDVVPIPTRYEYSDRIKSRIWSNRHELQENAERNALEFAAEGWDWRTVTEDDGMFICSVSGELVHPIHL 177
BLAST of NO07G03850 vs. NCBI_GenBank
Match: GAX14737.1 (hypothetical protein FisN_11Hh280 [Fistulifera solaris]) HSP 1 Score: 80.1 bits (196), Expect = 2.800e-11 Identity = 34/77 (44.16%), Postives = 51/77 (66.23%), Query Frame = 0 Query: 561 RRIVFHEDVCVVHIPSHTQYSSRVKSQYWTSPEEIYEMACRNLVEFEAEGYSWQRTLEEDQLFWCPDTGSFVHPAHV 638 R+I F ++V VV IP+ +YS R+KS+ W++ E+ E A RN +EF AEG+ W+ E+D +F C +G VHP H+ Sbjct: 102 RKIAFQDEVDVVPIPTRYEYSDRIKSRIWSNRHELQENAERNALEFAAEGWDWRTVTEDDGMFICSVSGELVHPIHL 178
BLAST of NO07G03850 vs. NCBI_GenBank
Match: OEU21959.1 (hypothetical protein FRACYDRAFT_267095 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 76.3 bits (186), Expect = 4.100e-10 Identity = 37/82 (45.12%), Postives = 50/82 (60.98%), Query Frame = 0 Query: 561 RRIVFHEDVCVVHIPSHTQYSSRVKSQYWTSPEEIYEMACRNLVEFEAEGYSWQRTLEEDQLFWCPDTGSFVHPAHVCMEEG 643 RRI F ++V VV IPS +YS+R+K YW +EI E A RN E+ +EG+ W+ EED+++ TG VHP C EG Sbjct: 159 RRIRFDDNVSVVPIPSRHKYSNRIKRAYWRDGKEIQECAERNRYEYASEGWKWESVFEEDEMYVDRSTGELVHP---CWIEG 237
BLAST of NO07G03850 vs. NCBI_GenBank
Match: EJK48655.1 (hypothetical protein THAOC_32525 [Thalassiosira oceanica]) HSP 1 Score: 75.1 bits (183), Expect = 9.100e-10 Identity = 38/102 (37.25%), Postives = 56/102 (54.90%), Query Frame = 0 Query: 554 SPYSHSRRRIVFHEDVCVVHIPSHTQYSSRVKSQYWTSPEEIYEMACRNLVEFEAEGYSWQRTLEEDQLFWCPDTGSFVHPAHVCMEEGDRGQAGREGGRLG 656 S S S+RR+ H DV V+ IPS T Y S VK + W+S E+ + A RN +EF AEG++W+ ++ Q+ +G +HP H G ++ RLG Sbjct: 253 SKKSRSKRRVSLHSDVRVISIPSRTDYPSLVKERLWSSATELSKNAARNTLEFAAEGFNWRNVADDAQML-SSSSGERIHPIHAMNIRGVFYKSPSTSPRLG 353
BLAST of NO07G03850 vs. NCBI_GenBank
Match: EJK67162.1 (hypothetical protein THAOC_11846 [Thalassiosira oceanica]) HSP 1 Score: 73.6 bits (179), Expect = 2.600e-9 Identity = 36/82 (43.90%), Postives = 53/82 (64.63%), Query Frame = 0 Query: 557 SHSRRRIVFHEDVCVVHIPSHTQYSSRVKSQYWTSPEEIYEMACRNLVEFEAEGYSWQRTL-EEDQLFWCPDTGSFVHPAHV 638 S RRR+ ++V VV IP ++YSSR+K + ++ E+ E A RN+VEFEAEG+ L +E+Q + CP TG +HP H+ Sbjct: 238 SARRRRLNISDEVQVVPIPMRSEYSSRIKERMYSGRVELSENAQRNVVEFEAEGWDASTVLDDENQFYKCPLTGELIHPVHL 319 The following BLAST results are available for this feature:
BLAST of NO07G03850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 15
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G03850 ID=NO07G03850|Name=NO07G03850|organism=Nannochloropsis oceanica|type=gene|length=4309bpback to top protein sequence of NO07G03850.1 >NO07G03850.1-protein ID=NO07G03850.1-protein|Name=NO07G03850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=657bpback to top Synonyms
Publications
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