NO07G03840, NO07G03840 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G03840 vs. NCBI_GenBank
Match: EWM26984.1 (emopamil binding protein [Nannochloropsis gaditana]) HSP 1 Score: 274.6 bits (701), Expect = 2.800e-70 Identity = 127/196 (64.80%), Postives = 155/196 (79.08%), Query Frame = 0
Query: 13 IPLNVVDKITLVWFILDAFTHLSIEAGYVFLALGPTANQSSSYMAFIWREYARADSRWAGRDPTILSIEILTAFLLGPLCLLAAWAIYTRRPYRHLVQLSISLFELYGGWMTFMPDIISGAHSLALHDPLLLWVHLVFMNGLWILLPILLAWESGVYLIHACTIAKT-----EESGKRREHVG---GLPSIGWFWM 201
+PL +D++ WF+LDA THLSIE GYV LALGPTA S S+M F+WREYARADSRWAGRDP I++IE++T FLLGP CLLAAWAIY RRPYRH++QL ISL ELYGGWMTF PD+++GA SLAL DP LL VHL+FMNGLW+L+P +LAWESG L+ AC++AK +E G +RE G G+PS+ WFW+
Sbjct: 20 VPLTYIDRVAFSWFVLDAITHLSIELGYVLLALGPTARASPSFMGFLWREYARADSRWAGRDPNIIAIELVTVFLLGPACLLAAWAIYHRRPYRHVLQLGISLLELYGGWMTFAPDVLAGAPSLALQDPFLLSVHLIFMNGLWVLVPAVLAWESGATLVGACSLAKVGASGGKEGGSKREERGQAPGIPSVHWFWV 215
BLAST of NO07G03840 vs. NCBI_GenBank
Match: XP_013760043.1 (hypothetical protein AMSG_03193 [Thecamonas trahens ATCC 50062] >KNC46765.1 hypothetical protein AMSG_03193 [Thecamonas trahens ATCC 50062]) HSP 1 Score: 174.1 bits (440), Expect = 5.100e-40 Identity = 94/210 (44.76%), Postives = 127/210 (60.48%), Query Frame = 0
Query: 19 DKITLVWFILDAFTHLSIEAGYVFLAL--GPTANQSSSYMAFIWREYARADSRWAGRDPTILSIEILTAFLLGPLCLLAAWAIYTRRPYRHLVQLSISLFELYGGWMTFMPDIISGAHSLALHDPLLLWVHLVFMNGLWILLPILLAWESGVYLIHACTIAKTEESGKRREHVGGLPSIGWFWMIAGIMVVYVVLVPLILLVSADRPPAV 227
D + L+WF LDA THL +EA Y++ AL A S S+ A IW EY +AD+RWAG DP + ++E+LT F+ GPL WAI+TRR RH+ Q+ IS+ ELYGG MTF+P+ I+G+ SL H P+L WV+L FMNG+W+ +P++L ES LI AC + S W +A I+ +Y V VPLIL + P V
Sbjct: 16 DVVALIWFALDAVTHLVLEASYLYYALLVPGGAASSDSWAASIWVEYGKADTRWAGNDPGVAALELLTVFIAGPLAAWLCWAIWTRRADRHVWQVVISVMELYGGGMTFIPEWIAGSPSLRTHHPVLTWVYLAFMNGVWVYVPLVLLAESIPILIAACDATSVPVA-------PAYLSSAWHTSVAVILAIYAVAVPLILATMSPEHPMV 218
BLAST of NO07G03840 vs. NCBI_GenBank
Match: XP_004367559.1 (Emopamil binding protein [Acanthamoeba castellanii str. Neff] >ELR22303.1 Emopamil binding protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 161.0 bits (406), Expect = 4.400e-36 Identity = 79/197 (40.10%), Postives = 126/197 (63.96%), Query Frame = 0
Query: 8 SLSIKIP----LNVVDKITLVWFILDAFTHLSIEAGYVFLALGPTANQSSSYMAFIWREYARADSRWAGRDPTILSIEILTAFLLGPLCLLAAWAIYTRRPYRHLVQLSISLFELYGGWMTFMPDIISGAHSLALHDPLLLWVHLVFMNGLWILLPILLAWESGVYLIHACT----IAKTEESGKRREHVGGLPSIG 197
+L++ +P L+ D + L+W++ D H+ +E +++++L TA S +AF+WREY +AD RWA DPTI+S+E+LT L LC+L A AI R+P+RH VQ+ + + ELYGGWMTF P+ ++G +L +P+ LWV+L F NG+W+++P +L W+S V + A + A + SGK++ V G +G
Sbjct: 30 ALALSVPFFRGLSFADNLALLWYVYDMLVHVIMEGSFLYVSLTGTAETSDFPLAFLWREYGKADRRWAISDPTIVSLELLTVVLCSILCILLAIAIVNRKPWRHFVQVFLCVMELYGGWMTFCPEWLTGNPNLDGSNPVYLWVYLWFANGIWVVIPAILLWQSFVAMNQAFSTTGGAAHVKTSGKKKT-VSGAKDVG 225
BLAST of NO07G03840 vs. NCBI_GenBank
Match: XP_022790586.1 (emopamil-binding protein-like [Stylophora pistillata] >PFX34048.1 Emopamil-binding protein-like [Stylophora pistillata]) HSP 1 Score: 156.0 bits (393), Expect = 1.400e-34 Identity = 72/149 (48.32%), Postives = 100/149 (67.11%), Query Frame = 0
Query: 18 VDKITLVWFILDAFTHLSIEAGYVFLALGPTANQSSSYMAFIWREYARADSRWAGRDPTILSIEILTAFLLGPLCLLAAWAIYTRRPYRHLVQLSISLFELYGGWMTFMPDIISGAHSLALHDPLLLWVHLVFMNGLWILLPILLAWES 167
++K + W + DA TH S+E +V+ +L + N S+ +A +W+EY +ADSRW DPTI+S+EILT FL GPL LL +AI YRH VQ+++ + ELYGGWMTF P+ + G+ SL L LW +LVF NGLW+++P LL W S
Sbjct: 42 LEKWIITWLLYDAMTHFSLEGPFVYFSLTGSVNTSNHILAELWKEYGKADSRWLHSDPTIVSLEILTVFLTGPLALLLIYAISYNTHYRHFVQITLCVCELYGGWMTFCPEWLVGSPSLDTSSDLYLWCYLVFFNGLWVVIPFLLLWHS 190
BLAST of NO07G03840 vs. NCBI_GenBank
Match: XP_002733492.1 (PREDICTED: emopamil-binding protein-like [Saccoglossus kowalevskii]) HSP 1 Score: 155.6 bits (392), Expect = 1.900e-34 Identity = 73/156 (46.79%), Postives = 107/156 (68.59%), Query Frame = 0
Query: 15 LNVVDKITLVWFILDAFTHLSIEAGYVFLALGPTANQSSSYMAFIWREYARADSRWAGRDPTILSIEILTAFLLGPLCLLAAWAIYTRRPYRHLVQLSISLFELYGGWMTFMPDIISGAHSLALHDPLLLWVHLVFMNGLWILLPILLAWESGVYL 171
L V+K +VWFI DA H ++EA +V+L+L + + S SY+A +W+EY +AD RW DPTI+S+E+LT + GPL LL +AI R YRH +Q++I + ELYGG+MTF PD + G+ +L +PL LW +L+F NGLW++ P L ++S + L
Sbjct: 36 LLTVEKWVIVWFIYDAIVHFTLEAPFVYLSLVGSVDTSDSYIAMLWKEYGKADKRWLYSDPTIVSLELLTVGITGPLALLCVYAIVKRTYYRHFIQITICVCELYGGFMTFSPDWLIGSPNLDTTNPLYLWCYLIFFNGLWVVFPAALLYQSWMAL 191
BLAST of NO07G03840 vs. NCBI_GenBank
Match: XP_020601586.1 (emopamil-binding protein-like isoform X1 [Orbicella faveolata]) HSP 1 Score: 155.2 bits (391), Expect = 2.400e-34 Identity = 78/183 (42.62%), Postives = 112/183 (61.20%), Query Frame = 0
Query: 4 TRSRSLSIKIPLNVVDKITLVWFILDAFTHLSIEAGYVFLALGPTANQSSSYMAFIWREYARADSRWAGRDPTILSIEILTAFLLGPLCLLAAWAIYTRRPYRHLVQLSISLFELYGGWMTFMPDIISGAHSLALHDPLLLWVHLVFMNGLWILLPILLAWESGVYLIHACTIAKTEESGKRR 187
T + S+S K+P ++K + W DA TH S+E +V+ +L + N S+ +A +W+EY +ADSRW DPTI+S+EILT + GPL LL +AI + YRH VQ+++ ELYGGWMTF P+ ++G+ SL L LW +LVF N LW+++P LL W S + T T K+R
Sbjct: 30 TLAFSVSRKLP--SLEKWIIAWLFYDALTHFSLEGPFVYFSLTGSVNNSNHILAEVWKEYGKADSRWLFSDPTIVSLEILTVVITGPLALLLIYAIICDKHYRHFVQITLCACELYGGWMTFCPEWLTGSPSLDTSSLLYLWCYLVFFNSLWVVIPFLLLWHSWKEMEVVHTSVSTTNRKKKR 210
BLAST of NO07G03840 vs. NCBI_GenBank
Match: XP_002111830.1 (hypothetical protein TRIADDRAFT_24579 [Trichoplax adhaerens] >EDV25797.1 hypothetical protein TRIADDRAFT_24579 [Trichoplax adhaerens]) HSP 1 Score: 152.5 bits (384), Expect = 1.600e-33 Identity = 65/148 (43.92%), Postives = 100/148 (67.57%), Query Frame = 0
Query: 19 DKITLVWFILDAFTHLSIEAGYVFLALGPTANQSSSYMAFIWREYARADSRWAGRDPTILSIEILTAFLLGPLCLLAAWAIYTRRPYRHLVQLSISLFELYGGWMTFMPDIISGAHSLALHDPLLLWVHLVFMNGLWILLPILLAWES 167
DK ++W DA TH ++EA Y+ ++ T +S YMA +W+EY +ADSRW D ++S+EILT GP+C+ +AI + YRH +Q+++ + ELYGGWMTF P+ I+G+ SL + L LW++LVF NGLW+++P+ + W+S
Sbjct: 42 DKWIIIWLFYDAITHFTLEASYLSMSFHGTVAKSEGYMAELWKEYGKADSRWIHFDTGLISLEILTVMFCGPVCIWLIYAIVNNKHYRHFLQITLCVCELYGGWMTFAPEWITGSPSLDTSNALYLWIYLVFFNGLWVVIPLAMLWQS 189
BLAST of NO07G03840 vs. NCBI_GenBank
Match: OCT93048.1 (hypothetical protein XELAEV_18016115mg [Xenopus laevis]) HSP 1 Score: 151.0 bits (380), Expect = 4.600e-33 Identity = 71/155 (45.81%), Postives = 103/155 (66.45%), Query Frame = 0
Query: 16 NVVDKITLVWFILDAFTHLSIEAGYVFLALGPTANQSSSYMAFIWREYARADSRWAGRDPTILSIEILTAFLLGPLCLLAAWAIYTRRPYRHLVQLSISLFELYGGWMTFMPDIISGAHSLALHDPLLLWVHLVFMNGLWILLPILLAWESGVYL 171
+ D+ LVW DA H ++E +V+ +L T S + +A +W+EY +AD+RW DPTI+S+EILT L G L LL +AI + YRH +Q+++ + ELYGGWMTF PD++ G+ SL + L LWV+LVF NG+W+L+P LL W+S + L
Sbjct: 42 SATDRWVLVWLFYDAIVHFTLEGPFVYFSLTGTVASSDNILASLWKEYGKADTRWLHSDPTIVSLEILTVVLDGLLALLLIYAIIKDKYYRHFIQITLCVCELYGGWMTFCPDLLIGSPSLNTSNWLYLWVYLVFFNGIWVLIPGLLLWQSWLEL 196
BLAST of NO07G03840 vs. NCBI_GenBank
Match: XP_006000623.1 (PREDICTED: emopamil-binding protein-like [Latimeria chalumnae]) HSP 1 Score: 150.6 bits (379), Expect = 6.000e-33 Identity = 70/164 (42.68%), Postives = 110/164 (67.07%), Query Frame = 0
Query: 16 NVVDKITLVWFILDAFTHLSIEAGYVFLALGPTANQSSSYMAFIWREYARADSRWAGRDPTILSIEILTAFLLGPLCLLAAWAIYTRRPYRHLVQLSISLFELYGGWMTFMPDIISGAHSLALHDPLLLWVHLVFMNGLWILLPILLAWES--GVYLIHACTIA 178
+ D+ LVW DA HL++E +V++++ T +S++ +A +W+EY +AD+RW DPTI+S+EILT L GPL LL I T + YRH +Q+++ + ELYGGWMTF P ++G+ +L + L LWV+L F NG+W+++P LL W+S G+ ++H I+
Sbjct: 42 SATDRWVLVWLFYDAIVHLTLEGPFVYMSVRGTVARSNNIVASLWKEYGKADARWLYSDPTIVSLEILTVVLAGPLALLLIHTIITEKYYRHFIQITLCVCELYGGWMTFCPVWLTGSPNLNTSNWLYLWVYLAFFNGVWVVIPGLLLWQSWQGLKVMHQAKIS 205
BLAST of NO07G03840 vs. NCBI_GenBank
Match: XP_002593090.1 (hypothetical protein BRAFLDRAFT_114090 [Branchiostoma floridae] >EEN49101.1 hypothetical protein BRAFLDRAFT_114090 [Branchiostoma floridae]) HSP 1 Score: 150.6 bits (379), Expect = 6.000e-33 Identity = 71/149 (47.65%), Postives = 102/149 (68.46%), Query Frame = 0
Query: 18 VDKITLVWFILDAFTHLSIEAGYVFLALGPTANQSSSYMAFIWREYARADSRWAGRDPTILSIEILTAFLLGPLCLLAAWAIYTRRPYRHLVQLSISLFELYGGWMTFMPDIISGAHSLALHDPLLLWVHLVFMNGLWILLPILLAWES 167
VDK LVW DA H + E +V+ ++ T +S S + +W+EY +ADSRW DPTI+S+EILT L G LCL+A +AI + YRH+VQ+++ + ELYGGWMTF P+ ++G+ SL + L LW++LVF NGLW+++P LL +S
Sbjct: 40 VDKWVLVWLFYDAIVHFTFEGPFVYFSIVGTVAKSDSLLTEVWKEYGKADSRWLHSDPTIVSLEILTVVLDGLLCLVAVYAICKDKHYRHIVQITLCVCELYGGWMTFCPEWLTGSPSLDTSNALYLWIYLVFFNGLWVVVPGLLMLQS 188 The following BLAST results are available for this feature:
BLAST of NO07G03840 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G03840 ID=NO07G03840|Name=NO07G03840|organism=Nannochloropsis oceanica|type=gene|length=2319bpback to top protein sequence of NO07G03840.1 >NO07G03840.1-protein ID=NO07G03840.1-protein|Name=NO07G03840.1|organism=Nannochloropsis oceanica|type=polypeptide|length=232bpback to top Synonyms
Publications
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