NO07G03800, NO07G03800 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO07G03800
Unique Name	NO07G03800
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2607
Alignment location	chr7:1064221..1066827 -

Link to JBrowse

Properties


Property Name	Value
Description	26s proteasome non-atpase regulatory subunit 11

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr7	genome	chr7:1064221..1066827 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016054	2021-01-14
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PXD008721	2019-04-30
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036390	WH_DNA-bd_sf
IPR011990	TPR-like_helical_dom
IPR000717	PCI_dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular

Homology

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BLAST of NO07G03800 vs. NCBI_GenBank
Match: XP_008903178.1 (hypothetical protein PPTG_10267 [Phytophthora parasitica INRA-310] >ETI50872.1 hypothetical protein F443_05663 [Phytophthora parasitica P1569] >ETK90759.1 hypothetical protein L915_05527 [Phytophthora parasitica] >ETL44172.1 hypothetical protein L916_05467 [Phytophthora parasitica] >ETL97345.1 hypothetical protein L917_05352 [Phytophthora parasitica] >ETM50495.1 hypothetical protein L914_05476 [Phytophthora parasitica] >ETN11369.1 hypothetical protein PPTG_10267 [Phytophthora parasitica INRA-310] >ETO79614.1 hypothetical protein F444_05713 [Phytophthora parasitica P1976] >ETP20643.1 hypothetical protein F441_05671 [Phytophthora parasitica CJ01A1] >KUF75628.1 26S proteasome non-ATPase regulatory subunit 11 [Phytophthora nicotianae])

HSP 1 Score: 398.3 bits (1022), Expect = 3.500e-107
Identity = 224/444 (50.45%), Postives = 301/444 (67.79%), Query Frame = 0

Query:   35 TTNANAAMEEEESKPDPLKEALEAAEEQA-----QTHPAQAIAAFHDVLHTPNRDD--EVAQRIKEEAIYRLAKLHADAHGFREVMALLKDSNDYFALVPKAKTAKIVRTIIDIVTKV-----PNSVDLQVELCKEVVAWCIAQKRTFLRQRIESRLAALLFLRGDYTDALSLINKLLRELKKFDDKQLLVETHLIEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKTSHSYFLEAFEAFDSLSDPRARKCLEYMMLCSILQGTPQEVS-AVTSKHGLKYAGEGMSALVAIAAAAKARSLELFDGAREEYGGVLAGDLLMKHHVHIVYEQLLESNLLKIIEPFSCVEISHVASLINLPEKTVEKKLSQMILDDKILGTLDQGQGQLLVYEGSGLDKTYTHGLEVIGNLGMVVDSLFRRAQKM 466
            TT  +  M E E +  PL+   E AE+ A      T P  AI AF  ++     D   E  QR+KE +IY+LA+L+      +E+ +LL+    +FA + +AKT KIVRT+ID+V KV       ++ LQ +LC + + WC  +K TFLRQR+E+RLA++ F +  +  AL LI +LL E+KK DDKQLLVE HL+E+++ HALRN+PKAKAALTAAR+  N+IYVVP  QA++DQMSG+LH EE DYKT++SYF EAFEA  +L +    KCL+YM+L  +  G   EV+  + SK  +K+ G  + A+ A+A A + RSLE F+ A ++Y   L  D L+K+H+  +YEQLLESNL+KII+PFSCVEI+HVA LI LP   +E KLSQMILD K  G LDQG+GQL+VY+    DKTYT GL VI N+G +VD+LFRRA K+
Sbjct:    2 TTTQDVEMAEPE-QVHPLQTQFEDAEDLAVDLTPSTSPNAAIEAFQSIISYAGEDAMLEQVQRVKEHSIYKLAQLYIQFGREKELASLLQALRPFFATLARAKTGKIVRTVIDMVAKVKVLDAEKALQLQADLCIDSIEWCKQEKHTFLRQRVEARLASIYFQQNKFQPALDLITELLHEIKKLDDKQLLVEIHLVESKLHHALRNVPKAKAALTAARSISNTIYVVPRTQAQIDQMSGILHAEERDYKTAYSYFFEAFEALATLDEVEGLKCLKYMLLAKVASGGASEVNLIINSKQAIKFIGVDLEAMQAVAKAHEQRSLEQFEAATKKYAPQLVEDPLIKNHLGKLYEQLLESNLIKIIQPFSCVEIAHVAKLIKLPLPQIELKLSQMILDHKFHGILDQGKGQLIVYDSPVEDKTYTSGLGVIENVGHIVDNLFRRADKL 444

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BLAST of NO07G03800 vs. NCBI_GenBank
Match: XP_008862399.1 (hypothetical protein H310_01140 [Aphanomyces invadans] >ETW08594.1 hypothetical protein H310_01140 [Aphanomyces invadans])

HSP 1 Score: 398.3 bits (1022), Expect = 3.500e-107
Identity = 217/432 (50.23%), Postives = 298/432 (68.98%), Query Frame = 0

Query:   45 EESKPDPLKEALEAAE---EQAQTHPAQAIAAFHDVL--HTPNRDDEVAQRIKEEAIYRLAKLHADAHGFREVMALLKDSNDYFALVPKAKTAKIVRTIIDIVTKV-----PNSVDLQVELCKEVVAWCIAQKRTFLRQRIESRLAALLFLRGDYTDALSLINKLLRELKKFDDKQLLVETHLIEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKTSHSYFLEAFEAFDSLSDPRARKCLEYMMLCSILQGTPQEVSAVTS-KHGLKYAGEGMSALVAIAAAAKARSLELFDGAREEYGGVLAGDLLMKHHVHIVYEQLLESNLLKIIEPFSCVEISHVASLINLPEKTVEKKLSQMILDDKILGTLDQGQGQLLVYEGSGLDKTYTHGLEVIGNLGMVVDSLFRRAQKM 466
            E ++   L+E  + AE   E+ +  P ++IAAF  +L  H  +   EV  ++KE +IY+L +L+      +E+ ALL++   +FA +PKAKT KIVRT+ID+V+KV       ++  Q +LC + +AWC  +K TFLRQRI++RLA++LF +  +  AL LI +LLRE+KK DDK LLV+ HL+E+++ HALRN+PKAKA+LTAAR+  N+IY++P  QA +D MSG+LH EE DYKT++SYF EAFEA   L    A  CL+YM+LC +  G   +V A+ S K+ +K++G  + AL A+A A   RSL+LF  A   Y   L  D L+KHH+ ++YE LLESNL+KII+P+SCVEI HVA LI LP   +E KLSQMILD K  G LDQG+GQL+VYE    DKTY  GL VI N+G +VD+LFRRA+K+
Sbjct:   13 EHTQKHKLQEDFDTAEEEIEEGRALPERSIAAFQKILAYHGADESLEVVHKVKELSIYKLGQLYIRHGREKELAALLQNVRPFFATIPKAKTGKIVRTVIDMVSKVKVLDATMALQFQADLCYDSIAWCNLEKHTFLRQRIQARLASILFEQQKFQAALDLITELLREIKKLDDKPLLVDIHLVESKLYHALRNVPKAKASLTAARSIANTIYIIPRTQATIDHMSGILHAEERDYKTAYSYFFEAFEALVPLDQGEALACLKYMLLCKVANGQSSDVPAIVSTKNAIKFSGIDIEALKAVAKAHDQRSLDLFQQATTTYAAQLVADPLIKHHLGLLYETLLESNLIKIIQPYSCVEIDHVAKLIKLPLAQIETKLSQMILDHKFHGILDQGRGQLIVYENPSEDKTYKAGLGVIENVGHIVDTLFRRAEKL 444

[Close]

BLAST of NO07G03800 vs. NCBI_GenBank
Match: GAQ89823.1 (26S proteasome regulatory subunit N6 [Klebsormidium nitens])

HSP 1 Score: 397.5 bits (1020), Expect = 5.900e-107
Identity = 217/413 (52.54%), Postives = 283/413 (68.52%), Query Frame = 0

Query:   54 EALEAAEEQAQTHPAQAIAAFHDVLHTPNRDDEVAQRIKEEAIYRLAKLHADAHGFREVMALLKDSNDYFALVPKAKTAKIVRTIIDIVTKVPNSVDLQVELCKEVVAWCIAQKRTFLRQRIESRLAALLFLRGDYTDALSLINKLLRELKKFDDKQLLVETHLIEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKTSHSYFLEAFEAFDSLSDPRARKCLEYMMLCSILQGTPQEV-SAVTSKHGLKYAGEGMSALVAIAAAAKARSLELFDGAREEYGGVLAGDLLMKHHVHIVYEQLLESNLLKIIEPFSCVEISHVASLINLPEKTVEKKLSQMILDDKILGTLDQGQGQLLVYEGSGLDKTYTHGLEVIGNLGMVVDSLFRRAQKM 466
            + LE   E+  T P  A+  F  ++   +   E A R+KE+AI     + A     +E+  LLK    +F L+PKAKTAKIVRTIID V KVPNS  +QVELCKE V W   +KR+FLRQR+ESRLAAL    G++  AL LI  LLRE+K+ DDK LLVE HL+E+++ H LRNLPKAKAALTAARTA NSIYV PA Q  +D  SG LH EE DYKT +SYF EAFEAF +L DP+A  CL+YM+LC ++    ++V S ++SK GLKY G  + AL A+A A   RSL  F+ A +++G  L GD +++HH+  +Y+ LL+ NL++IIEP+S VE++HVA LINLP+  VE KLSQMILD +  GTLDQG G L++++    D  Y   LE I N+G VVDSL+R++ K+
Sbjct:   40 KTLEKGVEKQATDPESALEIFGRIMADDSAGAE-ALRVKEQAIQATGDILASQGKAQELRELLKSLRPFFGLIPKAKTAKIVRTIIDQVAKVPNSTHVQVELCKEQVEWTKQEKRSFLRQRVESRLAALYMEIGEFQGALQLIGSLLREVKRLDDKLLLVEIHLLESKLHHGLRNLPKAKAALTAARTAANSIYVPPAQQGLIDMQSGTLHAEEKDYKTGYSYFYEAFEAFSALDDPKAVLCLKYMLLCKVMTNQAEDVNSIISSKGGLKYTGPEVDALKAVATAHSKRSLADFERALQDHGEQLKGDAIIEHHLAALYDTLLQQNLIRIIEPYSRVELTHVAKLINLPQPKVEAKLSQMILDHRFAGTLDQGAGVLIIFDDLPPDTIYPTALETIENMGKVVDSLYRKSAKI 451

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BLAST of NO07G03800 vs. NCBI_GenBank
Match: OWZ05851.1 (26S proteasome regulatory subunit N6 [Phytophthora megakarya])

HSP 1 Score: 397.1 bits (1019), Expect = 7.700e-107
Identity = 221/431 (51.28%), Postives = 295/431 (68.45%), Query Frame = 0

Query:   45 EESKPDPLKEALEAAEE--QAQTHPAQAIAAFHDVLHTPNRDDEV--AQRIKEEAIYRLAKLHADAHGFREVMALLKDSNDYFALVPKAKTAKIVRTIIDIVTKV-----PNSVDLQVELCKEVVAWCIAQKRTFLRQRIESRLAALLFLRGDYTDALSLINKLLRELKKFDDKQLLVETHLIEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKTSHSYFLEAFEAFDSLSDPRARKCLEYMMLCSILQGTPQEVS-AVTSKHGLKYAGEGMSALVAIAAAAKARSLELFDGAREEYGGVLAGDLLMKHHVHIVYEQLLESNLLKIIEPFSCVEISHVASLINLPEKTVEKKLSQMILDDKILGTLDQGQGQLLVYEGSGLDKTYTHGLEVIGNLGMVVDSLFRRAQKM 466
            E  +  PL+   E AEE   A T P  +I AF  ++     D E+   QR+KE +IY+LA+L+      +E+ ALL+    +FA + +AKT KIVRT+ID+V KV       ++ LQ +LC + + WC  +K TFLRQR+E+RLA++ F +  +  AL LI +LL E+KK DDKQLLVE HL+E+++ HALRN+PKAKAALTAAR+  N+IYVVP  QA++DQMSG+LH EE DYKT++SYF EAFEA   L +    KCL+YM+L  I  G   EV+  + SK  +K+ G  + A+  +A A + RSLE F+ A  +Y   L  D L+K+H+  +YEQLLESNL+KII+PFSCVEI+HVA+LI LP   +E KLSQMILD K  G LDQG+GQL+VY+    DKTYT GL VI N+G +VD+LFRRA K+
Sbjct:    9 EAEQLHPLQTQFEDAEEAAAANTSPDASIQAFQRIVSYAGDDAELEQVQRVKEHSIYKLAQLYIQFGREKELAALLQALRPFFATLARAKTGKIVRTVIDMVAKVQVLDAEKALQLQADLCLDSIEWCKQEKHTFLRQRVEARLASIYFQQHKFQPALDLITELLHEIKKLDDKQLLVEIHLVESKLHHALRNVPKAKAALTAARSISNTIYVVPRTQAQIDQMSGILHAEERDYKTAYSYFFEAFEALAPLDEVEGLKCLKYMLLSKIASGGASEVNLIINSKQAMKFIGIDLEAMQEVAKAHEQRSLEQFEAATMKYAAQLVEDALIKNHLGKLYEQLLESNLIKIIQPFSCVEIAHVATLIKLPLSQIELKLSQMILDHKFHGILDQGKGQLIVYDSPTEDKTYTSGLGVIENVGHIVDNLFRRADKL 439

[Close]

BLAST of NO07G03800 vs. NCBI_GenBank
Match: GAX96854.1 (Hypothetical protein PINS_004748 [Pythium insidiosum])

HSP 1 Score: 396.7 bits (1018), Expect = 1.000e-106
Identity = 220/441 (49.89%), Postives = 292/441 (66.21%), Query Frame = 0

Query:   44 EEESKPDPLKEALEAAE-------EQAQTHPAQAIAAFHDVLHTPNRDD------EVAQRIKEEAIYRLAKLHADAHGFREVMALLKDSNDYFALVPKAKTAKIVRTIIDIVTKV-----PNSVDLQVELCKEVVAWCIAQKRTFLRQRIESRLAALLFLRGDYTDALSLINKLLRELKKFDDKQLLVETHLIEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKTSHSYFLEAFEAFDSLSDPRARKCLEYMMLCSILQGTPQEV-SAVTSKHGLKYAGEGMSALVAIAAAAKARSLELFDGAREEYGGVLAGDLLMKHHVHIVYEQLLESNLLKIIEPFSCVEISHVASLINLPEKTVEKKLSQMILDDKILGTLDQGQGQLLVYEGSGLDKTYTHGLEVIGNLGMVVDSLFRRAQKM 466
            EE     PL+  LE AE       E ++     A   F +   + +  D      E+ QR KE AIY+L++ +      +E+ +LL+    +F  +PKAKT KI+RT+ID+V+KV       ++ LQ +LC + + WC  +K  FLRQR+E+RLA + FL+  Y  AL L+  L+RE+KK DDKQLLVE HL+E+++ HALRN+PKAKAALTAAR+  N+IYVVP  Q+++DQMSG+LH EE DYKT +SYF EAFE   +L D  A  CL+YM+LC I  G   EV S +  K  +KY G    AL A+A A + RSLE+F+ A ++Y   L  D L+K H+  +YEQLLESNL+KII+PFSCVEI+HVA LINLP + +E KLSQMILD K  G LDQG+GQL+VY+    D TY  GL VI N+G +VDSLFRRA+K+
Sbjct:   10 EEVEAVHPLQLKLEDAEEIIAGLTESSKPDEQSAFGRFGEAADSRSVADGSDAALEIVQRTKEHAIYKLSQTYIQYGREKELASLLQSLRPFFLTIPKAKTGKIIRTVIDMVSKVKVLDTDKALQLQADLCLDSIEWCKLEKHMFLRQRVEARLAVIYFLQQKYQPALDLVTTLVREIKKLDDKQLLVEIHLVESKLHHALRNIPKAKAALTAARSISNAIYVVPKTQSQIDQMSGILHAEEHDYKTGYSYFFEAFETLANLEDKEALSCLKYMLLCKIANGGASEVNSIINGKQAIKYIGIDTEALQAVAKAHEKRSLEMFEAATQKYSAQLVDDPLIKSHLGKLYEQLLESNLIKIIQPFSCVEIAHVAKLINLPLQQIELKLSQMILDHKFHGILDQGKGQLIVYDSPQEDNTYKSGLGVIENVGHIVDSLFRRAEKL 450

[Close]

BLAST of NO07G03800 vs. NCBI_GenBank
Match: XP_009821771.1 (hypothetical protein H257_00678 [Aphanomyces astaci] >ETV89371.1 hypothetical protein H257_00678 [Aphanomyces astaci])

HSP 1 Score: 395.2 bits (1014), Expect = 2.900e-106
Identity = 220/432 (50.93%), Postives = 296/432 (68.52%), Query Frame = 0

Query:   45 EESKPDPLKEALEAAEEQAQ---THPAQAIAAFHDVLHTPNRDD--EVAQRIKEEAIYRLAKLHADAHGFREVMALLKDSNDYFALVPKAKTAKIVRTIIDIVTKV-----PNSVDLQVELCKEVVAWCIAQKRTFLRQRIESRLAALLFLRGDYTDALSLINKLLRELKKFDDKQLLVETHLIEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKTSHSYFLEAFEAFDSLSDPRARKCLEYMMLCSILQGTPQEVSAVTS-KHGLKYAGEGMSALVAIAAAAKARSLELFDGAREEYGGVLAGDLLMKHHVHIVYEQLLESNLLKIIEPFSCVEISHVASLINLPEKTVEKKLSQMILDDKILGTLDQGQGQLLVYEGSGLDKTYTHGLEVIGNLGMVVDSLFRRAQKM 466
            E  K   L+E  +AAEE+ +     P ++IAAF  +L     DD  EV  ++KE +IY+L +L+      +E+ ALL++   +F+ +PKAKT KIVRTIID+V+KV       ++  Q +LC + +AWC  +K TFLRQRI++RLA++LF +  +  AL LI +LLRE+KK DDK LLV+ HL+E+++ HALRN+PKAKA+LTAAR+  N+IY++P  QA +D MSG+LH EE DYKT+ SYF EAFEA   L    A  CL+YM+L  +  G   +V A+ S K+ +K+ G  + AL A+A A   RSLELF  A   Y   L  D L+KHH+ ++YE+LLESNL+KII P+SCVEI+HVA+LI LP   +E KLSQMILD K  G LDQG+GQL+VYE    DKTY  GL VI N+G +VD+LFRRA K+
Sbjct:   13 EVPKKHKLQEDFDAAEEEIEEERASPERSIAAFQKILAYHGADDNLEVVHKVKELSIYKLGQLYIRHGREKELAALLQNVRPFFSTIPKAKTGKIVRTIIDMVSKVKVLDATKALQFQADLCYDSIAWCNLEKHTFLRQRIQARLASILFEQQKFQAALDLITELLREIKKLDDKPLLVDIHLVESKLYHALRNVPKAKASLTAARSIANTIYIIPRTQANIDHMSGILHAEERDYKTAFSYFFEAFEALVPLDPVEALACLKYMLLSKVANGQSADVPAIVSTKNAIKFTGIDIEALKAVAKAHDQRSLELFQQATTTYAAQLVTDPLIKHHLGLLYEKLLESNLIKIIHPYSCVEINHVANLIKLPLVQIETKLSQMILDHKFHGILDQGRGQLIVYENPTEDKTYKAGLGVIENVGHIVDTLFRRADKL 444

[Close]

BLAST of NO07G03800 vs. NCBI_GenBank
Match: XP_024581828.1 (26S proteasome regulatory complex, subunit RPN6/PSMD11 [Plasmopara halstedii] >CEG45459.1 26S proteasome regulatory complex, subunit RPN6/PSMD11 [Plasmopara halstedii])

HSP 1 Score: 388.3 bits (996), Expect = 3.600e-104
Identity = 218/434 (50.23%), Postives = 294/434 (67.74%), Query Frame = 0

Query:   45 EESKPDPLKEALEAAEE--QAQTH---PAQAIAAFHDVLHTPNRDDEVAQ--RIKEEAIYRLAKLHADAHGFREVMALLKDSNDYFALVPKAKTAKIVRTIIDIVTK-----VPNSVDLQVELCKEVVAWCIAQKRTFLRQRIESRLAALLFLRGDYTDALSLINKLLRELKKFDDKQLLVETHLIEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKTSHSYFLEAFEAFDSLSDPRARKCLEYMMLCSILQGTPQEVS-AVTSKHGLKYAGEGMSALVAIAAAAKARSLELFDGAREEYGGVLAGDLLMKHHVHIVYEQLLESNLLKIIEPFSCVEISHVASLINLPEKTVEKKLSQMILDDKILGTLDQGQGQLLVYEGSGLDKTYTHGLEVIGNLGMVVDSLFRRAQKM 466
            E  +  PL+   E AE+   A +H   P  AI AF  ++     D  + Q  R+KE +IY+LA+L+      +E+ +LL+    +FA +P+AKT KIVRT+ID+V K     V  ++ LQ +LC + + WC  +K TFLRQRIE+RLA++ F    +  AL+LI +LL E+KK DDKQLLV+ HL+E+++ H LRN+PKAKAALTAAR+  N+IYVVP  QA++DQMSG+LH EE DYKT++SYF EAFEA  +L +    KCL+YM+L  I      EV+  + SK  +K+ G  + A+ A+A A + RSLE F+ A  +Y   L  D L+K+H+  +YEQLLESNL+KII+PFSCVEI+HVA LI LP   +E KLSQMILD K  G LDQG+GQL+VY+    DKTY  GL VI N+G +VD+LFRRA K+
Sbjct:   11 EPQEIHPLQTQFEEAEDIVAALSHSASPDVAIQAFQSIISYAAEDANLEQVHRLKEHSIYKLAQLYIQYGREKELASLLQALRPFFATLPRAKTGKIVRTVIDMVAKVKVLDVEKALQLQADLCLDSIEWCKQEKHTFLRQRIEARLASIYFQLHKFQPALNLITELLHEIKKLDDKQLLVDIHLVESKLHHVLRNVPKAKAALTAARSISNTIYVVPRTQAQIDQMSGILHAEERDYKTAYSYFFEAFEALATLDEEEGLKCLKYMLLAKIASDGASEVNLIINSKQAMKFIGIELEAMQAVAKAHEQRSLEQFEAATTKYAPQLVEDPLIKNHLGKLYEQLLESNLIKIIQPFSCVEIAHVAKLIKLPLSQIELKLSQMILDHKFHGILDQGKGQLIVYDNPSEDKTYASGLGVIDNVGNIVDNLFRRADKL 444

[Close]

BLAST of NO07G03800 vs. NCBI_GenBank
Match: OTG20363.1 (putative 26S proteasome non-ATPase regulatory subunit 11 [Helianthus annuus])

HSP 1 Score: 385.6 bits (989), Expect = 2.300e-103
Identity = 212/413 (51.33%), Postives = 291/413 (70.46%), Query Frame = 0

Query:   54 EALEAAEEQAQTHPAQAIAAFHDVLHTPNRDDEVAQRIKEEAIYRLAKLHADAHGFREVMALLKDSNDYFALVPKAKTAKIVRTIIDIVTKVPNSVDLQVELCKEVVAWCIAQKRTFLRQRIESRLAALLFLRGDYTDALSLINKLLRELKKFDDKQLLVETHLIEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKTSHSYFLEAFEAFDSLSDPRARKCLEYMMLCSILQGTPQEVSAVTSKHGLKYAGEGMSALVAIAAAAKARSLELFDGAREEYGGVLAGDLLMKHHVHIVYEQLLESNLLKIIEPFSCVEISHVASLINLPEKTVEKKLSQMILDDKILGTLDQGQGQLLVYEGSGLDKTYTHGLEVIGNLGMVVDSLFRRAQKML 467
            E+L+ A E A+T P++AI   + VL  P    E A R+KE+AI ++++L  D +   ++  LL     +FAL+PKAKTAKIVR IID V K+PNS DLQ+ LCKE+V W  A+KRTFLRQR+E+RLAALL    +Y++AL+L++ L++E+++ DDK LLV+  L+E+++  +LRNLPKAKAALTAARTA N+IYV PA Q  +D  SG+LH EE DYKT++SYF EAFEAF++L DPRA   L+YM+LC I+     +V+ + S   LK+ G  + A+ A+A A   RSL+LF+ A +++   L  D ++  H+  +Y+ LLE NL ++IEPFS VEI H+ASLI LP + VEKKLSQMILD K  GTLDQG G L+++E    D  +   LE I N+G VVDSLF R+ K++
Sbjct:   73 ESLDLASE-AKT-PSEAINILYQVLDNPASSSE-ALRVKEQAIAKISELLRDENRGEDLRGLLTTLRPFFALIPKAKTAKIVRGIIDSVAKIPNSTDLQISLCKEMVEWTRAEKRTFLRQRVEARLAALLMDSKEYSEALTLLSGLVKEVRRLDDKLLLVDIDLLESKLHFSLRNLPKAKAALTAARTAANAIYVPPAQQGTIDLQSGILHAEEKDYKTAYSYFFEAFEAFNALDDPRAVYSLKYMLLCKIMVNQADDVAGIISSKALKFLGPELDAMKAVADAYAKRSLKLFETALQDFKAQLDEDPIVHRHLSSLYDTLLEQNLCRLIEPFSRVEIGHIASLIELPVEHVEKKLSQMILDKKFAGTLDQGVGCLIIFEDPKTDAIFPATLETIQNMGKVVDSLFVRSAKIM 482

[Close]

BLAST of NO07G03800 vs. NCBI_GenBank
Match: XP_021972852.1 (26S proteasome non-ATPase regulatory subunit 11 homolog [Helianthus annuus])

HSP 1 Score: 385.6 bits (989), Expect = 2.300e-103
Identity = 212/413 (51.33%), Postives = 291/413 (70.46%), Query Frame = 0

Query:   54 EALEAAEEQAQTHPAQAIAAFHDVLHTPNRDDEVAQRIKEEAIYRLAKLHADAHGFREVMALLKDSNDYFALVPKAKTAKIVRTIIDIVTKVPNSVDLQVELCKEVVAWCIAQKRTFLRQRIESRLAALLFLRGDYTDALSLINKLLRELKKFDDKQLLVETHLIEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKTSHSYFLEAFEAFDSLSDPRARKCLEYMMLCSILQGTPQEVSAVTSKHGLKYAGEGMSALVAIAAAAKARSLELFDGAREEYGGVLAGDLLMKHHVHIVYEQLLESNLLKIIEPFSCVEISHVASLINLPEKTVEKKLSQMILDDKILGTLDQGQGQLLVYEGSGLDKTYTHGLEVIGNLGMVVDSLFRRAQKML 467
            E+L+ A E A+T P++AI   + VL  P    E A R+KE+AI ++++L  D +   ++  LL     +FAL+PKAKTAKIVR IID V K+PNS DLQ+ LCKE+V W  A+KRTFLRQR+E+RLAALL    +Y++AL+L++ L++E+++ DDK LLV+  L+E+++  +LRNLPKAKAALTAARTA N+IYV PA Q  +D  SG+LH EE DYKT++SYF EAFEAF++L DPRA   L+YM+LC I+     +V+ + S   LK+ G  + A+ A+A A   RSL+LF+ A +++   L  D ++  H+  +Y+ LLE NL ++IEPFS VEI H+ASLI LP + VEKKLSQMILD K  GTLDQG G L+++E    D  +   LE I N+G VVDSLF R+ K++
Sbjct:   11 ESLDLASE-AKT-PSEAINILYQVLDNPASSSE-ALRVKEQAIAKISELLRDENRGEDLRGLLTTLRPFFALIPKAKTAKIVRGIIDSVAKIPNSTDLQISLCKEMVEWTRAEKRTFLRQRVEARLAALLMDSKEYSEALTLLSGLVKEVRRLDDKLLLVDIDLLESKLHFSLRNLPKAKAALTAARTAANAIYVPPAQQGTIDLQSGILHAEEKDYKTAYSYFFEAFEAFNALDDPRAVYSLKYMLLCKIMVNQADDVAGIISSKALKFLGPELDAMKAVADAYAKRSLKLFETALQDFKAQLDEDPIVHRHLSSLYDTLLEQNLCRLIEPFSRVEIGHIASLIELPVEHVEKKLSQMILDKKFAGTLDQGVGCLIIFEDPKTDAIFPATLETIQNMGKVVDSLFVRSAKIM 420

[Close]

BLAST of NO07G03800 vs. NCBI_GenBank
Match: EJK58185.1 (hypothetical protein THAOC_21709 [Thalassiosira oceanica])

HSP 1 Score: 385.2 bits (988), Expect = 3.000e-103
Identity = 205/420 (48.81%), Postives = 288/420 (68.57%), Query Frame = 0

Query:   71 IAAFHDVLHTP-NRDDEVAQRIKEEAIYRLAKLHADAHGFREVMALLKDSN--DYFALVPKAKTAKIVRTIIDIVTKV-PNSVDLQVELCKEVVAWCIAQKRTFLRQRIESRLAALLFLRGDYTDALSLINKLLRELKKFDDKQLLVETHLIEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKTSHSYFLEAFEAFDSLSD-PRARKCLEYMMLCSILQGTPQEV--------------------SAVTSKHGLKYAGEGMSALVAIAAAAKARSLELFDGAREEYGGVLAGDLLMKHHVHIVYEQLLESNLLKIIEPFSCVEISHVASLINLPEKTVEKKLSQMILDDKILGTLDQGQGQLLVYEGSGLDKTYTHGLEVIGNLGMVVDSLFRRAQKM 466
            I     +L+ P NR    A  IKE A+Y +A+ + + + F +V+ LL  +    +FA + KAKTAK+VR ++D V  + P+ +D+Q ++C+ +++WC  +KR+FLRQR+ES+LA++LF +  Y +++++++ LL ELKK DDKQLLVE HL+E+++ H LR + KAKAALTA+RT+ N+IYV PA+Q+++D  SGVLHCEEGDY T+HSYFLEAFE  D L D  +A  CL+YMMLC IL G  + +                      ++ K G+KYAG+ + A+ AIA+AA  RSL+ ++    +Y   L  DLL+KHH+  + EQLLESNL++IIEP+SCVEI HVA+LI +P   VEKKLSQMILD K  G LDQG+GQL+VYE S  DK   +GL+VI N+  VV SLF R+Q +
Sbjct:   49 IPVLESILNEPANRYGPKASAIKERAVYAVARAYCEDNRFDDVVTLLTGTTCAAFFANITKAKTAKVVRAVLDAVCALAPDQLDMQAQICRNIISWCQTEKRSFLRQRVESKLASVLFQQDKYGESVAMVDGLLVELKKLDDKQLLVEVHLVESKVHHGLRGMAKAKAALTASRTSANAIYVAPALQSQIDLQSGVLHCEEGDYDTAHSYFLEAFEQLDQLDDREKAVPCLKYMMLCKILDGLSKALGISATGAAGIRSDRNEADISGMISGKRGVKYAGKDVDAMSAIASAASKRSLKEYEAVLSKYPHELQDDLLIKHHLGTLQEQLLESNLIRIIEPYSCVEIDHVATLIEMPLAVVEKKLSQMILDGKFNGILDQGKGQLIVYEDSETDKAMENGLKVIDNIDKVVSSLFDRSQAL 468

The following BLAST results are available for this feature:

BLAST of NO07G03800 vs. NCBI_GenBank

BLAST of NO07G03800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
XP_008903178.1	3.500e-107	50.45	hypothetical protein PPTG_10267 [Phytophthora para...	[more]
XP_008862399.1	3.500e-107	50.23	hypothetical protein H310_01140 [Aphanomyces invad...	[more]
GAQ89823.1	5.900e-107	52.54	26S proteasome regulatory subunit N6 [Klebsormidiu...	[more]
OWZ05851.1	7.700e-107	51.28	26S proteasome regulatory subunit N6 [Phytophthora...	[more]
GAX96854.1	1.000e-106	49.89	Hypothetical protein PINS_004748 [Pythium insidios...	[more]
XP_009821771.1	2.900e-106	50.93	hypothetical protein H257_00678 [Aphanomyces astac...	[more]
XP_024581828.1	3.600e-104	50.23	26S proteasome regulatory complex, subunit RPN6/PS...	[more]
OTG20363.1	2.300e-103	51.33	putative 26S proteasome non-ATPase regulatory subu...	[more]
XP_021972852.1	2.300e-103	51.33	26S proteasome non-ATPase regulatory subunit 11 ho...	[more]
EJK58185.1	3.000e-103	48.81	hypothetical protein THAOC_21709 [Thalassiosira oc...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL100	nonsL100	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR071	ncniR071	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR130	ngnoR130	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK000469	NSK000469	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO07G03800.1	NO07G03800.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|581302	gene_2723	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100127g9	gene3562	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO07G03800.1	NO07G03800.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO07G03800 ID=NO07G03800|Name=NO07G03800|organism=Nannochloropsis oceanica|type=gene|length=2607bp
TCATGGATAATACTTTCTTTTGTACTACCTACCATGCTGCCTTTGCAAAT
TGTTCGTTTTGGGGACTCAGCAGATGACGAGGACGAAAGGCTATATCGCA
AATTATTATCTCCTTGGTCACTTGTCTGCACAACTGCTTTCGCGGCGGTG
GCCTGAGAGCTTCATTACTTCACCTTTATATACCGAAGCAGGGAAAGTAT
GCAGTACACCTCTACAAAGTCGGTCTCAATTTACTGCAAGGACTCCATGC
CCTGCATTCCTCCACTTTTTTTTTTCTTTCAAGAGGGGACAAGGACGAGG
GGGGAGGTCACCGACGAGGATGTCGCTACTTCCCCCTCCAATCGCATCCG
TGCCTCCATGATGCTTCACAATCATCCAGTATTCAGTCCAAAATCTGTTG
GTCGCCCAATTTTATACTTTTACGCCTTAAAAGCGCACCTAAACCAATGC
AAGGTACCCTTTTCCACTCTCGCTGCCATCATCGCCAACATCCAGAATTC
TTCGAAGCAGTCCGTGCTCTTTCCTACATGCCCGATCAACCCCACACACA
CAGCCATCATCCACCACCCTACAAACTCCCATGCATATAGACATAAAAAT
GGCGGGGGCAGATACAATGGACATCTCCCCAGGCAGCGGGGTGGAGGAGA
CCAAAACGTCGGGAGAGTCCAAACGCCAAACTACGACGAATGCCAACGCG
GCGATGgtacgttttcaggctgtgtttttcagtacatgcatcgaggttgt
atgtcctgagtgttgcggaagctttttgtgaaagtgatcagtgttttagg
aatgatgcctgtactttttgggggctctgctttggccggctctctgtctc
tcttctttcgcctttccttcagacgtagccccggcgttttcatcatctct
ctgcacctgctgtctgcaagcaagcctagctcctgagcattttcagcctg
cacaggctcgcgtgtctctttctgtcttcgtgctcctgccacgttccatt
tcttggtgtcaagtctttgtaaggtcacacttacgcacctcttctccctt
ccatcccttttcccacctcaaccagGAGGAAGAAGAAAGCAAGCCCGACC
CCCTCAAGGAAGCTCTGGAGGCGGCCGAGGAACAAGCGCAGACGCACCCT
GCGCAAGCCATCGCCGCTTTCCATGATGTCCTCCACACCCCCAACCGGGA
CGATGAAGTCGCCCAACGCATCAAGGAAGAAGCCATCTACCGCCTGGCCA
AACTGCATGCCGACGCCCACGGCTTCCGCGAAGTCATGGCCCTGCTCAAG
GATAGTAATGACTATTTTGCCCTGGTTCCCAAGGCCAAGACAGCGAAGAT
CGTGAGGACAATAATCGATATTGTCACTAAGGTTCCCAACTCGGTGGACC
TGCAGGTGGAGCTGTGCAAGGAGgtaagcgaaggaaggaggaaggaatgt
ggaggggatggatgggcgtggggataatgctgtggatgactaccatcagc
gatatcagattgagatatcataaggtgaaaatcgttaaggtgggtgcacg
ctcatctccctccctccctccctccctctctccctccctttttagGTCGT
CGCTTGGTGCATCGCCCAGAAACGGACCTTCCTGCGTCAACGCATCGAGT
CCCGACTCGCAGCCCTCCTCTTCCTCCGCGGGGATTACACGGACGCCCTC
TCCCTGATCAATAAACTTTTGCGCGAACTCAAAAAATTCGACGACAAGCA
ATTGCTTGTGGAGACCCACCTGATCGAGGCGCGCATTGACCACGCCTTGC
GCAACCTTCCCAAGGCCAAGGCCGCCCTGACCGCGGCCCGTACGGCAGGT
AACTCCATCTACGTCGTCCCTGCTATGCAAGCCGAGCTGGACCAGATGTC
GGGTGTGCTGCACTGCGAGGAAGGTGACTACAAGACGTCCCATTCCTATT
TCCTGGAGGCATTTGAGGCCTTCGATTCCTTGTCGGATCCTCGCGCACGC
AAGTGCCTGGAGTACATGATGCTGTGCTCCATCTTGCAAGGAACGCCCCA
GGAGGTGTCGGCAGTGACGAGCAAGCACGGGCTGAAATACGCGGGGGAGG
GAATGAGTGCTCTAGTGGCGATAGCGGCCGCGGCGAAGGCGCGAAGTTTG
GAGCTATTCGACGGGGCAAGGGAGGAATATGGGGGGGTGTTGGCGGGGGA
TTTGTTGATGAAGCACCACGTGCACATCGTGTATGAGCAGCTGCTGGAGT
CGAATCTGTTGAAGATTATTGAGCCCTTTTCGTGCGTGGAGATAAGTCAT
GTGGCGTCTCTCATCAACCTGCCGGAGAAGACGGTGGAAAAGAAGTTGTC
GCAGATGATTCTGGATGACAAGATATTGGGGACGTTGGACCAGGGGCAGG
GGCAGCTGCTGGTGTATGAGGGTAGTGGCTTGGATAAGACGTACACGCAT
GGGTTGGAGGTGATTGGAAATTTGGGGATGGTTGTGGACAGCTTGTTCAG
GCGGGCGCAGAAAATGTTGCACTCAGGGCATGTGGTGGGAGGGGTGGGAG
GAAGTGGGGAAGGGCCGGTGGAGAGTGCGTAAGATTGAAGAGGGTTTTTG
TAGGGAC

protein sequence of NO07G03800.1

>NO07G03800.1-protein ID=NO07G03800.1-protein|Name=NO07G03800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=487bp
MHIDIKMAGADTMDISPGSGVEETKTSGESKRQTTTNANAAMEEEESKPD
PLKEALEAAEEQAQTHPAQAIAAFHDVLHTPNRDDEVAQRIKEEAIYRLA
KLHADAHGFREVMALLKDSNDYFALVPKAKTAKIVRTIIDIVTKVPNSVD
LQVELCKEVVAWCIAQKRTFLRQRIESRLAALLFLRGDYTDALSLINKLL
RELKKFDDKQLLVETHLIEARIDHALRNLPKAKAALTAARTAGNSIYVVP
AMQAELDQMSGVLHCEEGDYKTSHSYFLEAFEAFDSLSDPRARKCLEYMM
LCSILQGTPQEVSAVTSKHGLKYAGEGMSALVAIAAAAKARSLELFDGAR
EEYGGVLAGDLLMKHHVHIVYEQLLESNLLKIIEPFSCVEISHVASLINL
PEKTVEKKLSQMILDDKILGTLDQGQGQLLVYEGSGLDKTYTHGLEVIGN
LGMVVDSLFRRAQKMLHSGHVVGGVGGSGEGPVESA*

Synonyms

Publications