NO07G03800, NO07G03800 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO07G03800
Unique Name	NO07G03800
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2607
Alignment location	chr7:1064221..1066827 -

Link to JBrowse

Properties


Property Name	Value
Description	26s proteasome non-atpase regulatory subunit 11

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr7	genome	chr7:1064221..1066827 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016054	2021-01-14
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PXD008721	2019-04-30
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036390	WH_DNA-bd_sf
IPR011990	TPR-like_helical_dom
IPR000717	PCI_dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular

Homology

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BLAST of NO07G03800 vs. NCBI_GenBank
Match: EWM26981.1 (26s proteasome non-atpase regulatory subunit 11 [Nannochloropsis gaditana])

HSP 1 Score: 731.5 bits (1887), Expect = 1.700e-207
Identity = 381/480 (79.38%), Postives = 429/480 (89.38%), Query Frame = 0

Query:    7 MAGADTMDISPGSGVEETKTSGESKRQTTTNANAAMEEEESKPDPLKEALEAAEEQAQTHPAQAIAAFHDVLHTPNRDDEVAQRIKEEAIYRLAKLHADAHGFREVMALLKDSNDYFALVPKAKTAKIVRTIIDIVTKVPNSVDLQVELCKEVVAWCIAQKRTFLRQRIESRLAALLFLRGDYTDALSLINKLLRELKKFDDKQLLVETHLIEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKTSHSYFLEAFEAFDSLSDPRARKCLEYMMLCSILQGTPQEVSAVTSKHGLKYAGEGMSALVAIAAAAKARSLELFDGAREEYGGVLAGDLLMKHHVHIVYEQLLESNLLKIIEPFSCVEISHVASLINLPEKTVEKKLSQMILDDKILGTLDQGQGQLLVYEGSGLDKTYTHGLEVIGNLGMVVDSLFRRAQKMLHSGHVVGGVGGSGEGPVESA 487
            M    +M++S   GVEE+KT+ E K    TN NAAMEEEES PDPLKEALEAAEE AQ+HP++AI AFH +++TP+R+D+ AQR+KEEAIYRLAKLHADAH F+EVM LLK S+ +FA +PKAKTAKIVRTIIDIVTK+P+SVDLQV+LC+EVVAWCIAQKRTFLRQRIESRLA LL+ R DY+ AL+LI+KLLRELKKFDDKQLLVETHL+EARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKT+HSYFLEAFEAFDSLSD RA KCLEYMMLC +LQGTPQ+VSAVTSKHGLKYAG+GM+AL+AIAAAAK RSLE FD AR+ YGGVLA DLL+ HHVHIVYEQLLESNLLKIIEPFSCVEI HVA+LINLP+K+VE+KLSQMILDDK+ GTLDQG+GQLLVYE S LDKT++HGLE++GNLGMVVDSLFRRAQKM+H+GH   G     EG V SA
Sbjct:    1 MTAPASMEVS--GGVEESKTATEPKPSAPTNVNAAMEEEESLPDPLKEALEAAEELAQSHPSKAITAFHAIVNTPDREDDAAQRLKEEAIYRLAKLHADAHQFQEVMLLLKTSDVFFAQIPKAKTAKIVRTIIDIVTKIPDSVDLQVDLCREVVAWCIAQKRTFLRQRIESRLATLLYARADYSGALALISKLLRELKKFDDKQLLVETHLVEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKTAHSYFLEAFEAFDSLSDLRAPKCLEYMMLCLVLQGTPQDVSAVTSKHGLKYAGDGMNALIAIAAAAKERSLEAFDAARKTYGGVLAQDLLLTHHVHIVYEQLLESNLLKIIEPFSCVEIEHVATLINLPQKSVERKLSQMILDDKLYGTLDQGKGQLLVYERSTLDKTFSHGLELVGNLGMVVDSLFRRAQKMVHAGHAREGXXXXXEGAVSSA 478

[Close]

BLAST of NO07G03800 vs. NCBI_GenBank
Match: CBJ31312.1 (expressed unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 464.2 bits (1193), Expect = 5.100e-127
Identity = 255/432 (59.03%), Postives = 320/432 (74.07%), Query Frame = 0

Query:   41 AMEEEESKPDPLKEALEAAEEQAQT-HPAQAIAAFHDVLHTPNRD----DEVAQRIKEEAIYRLAKLHADAHGFREVMALLKDSNDYFALVPKAKTAKIVRTIIDIVTKVPNSVDLQVELCKEVVAWCIAQKRTFLRQRIESRLAALLFLRGDYTDALSLINKLLRELKKFDDKQLLVETHLIEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKTSHSYFLEAFEAFDSLSDPRARKCLEYMMLCSILQGTPQEVSAV-TSKHGLKYAGEGMSALVAIAAAAKARSLELFDGAREEYGGVLAGDLLMKHHVHIVYEQLLESNLLKIIEPFSCVEISHVASLINLPEKTVEKKLSQMILDDKILGTLDQGQGQLLVYEGSGLDKTYTHGLEVIGNLGMVVDSLFRRAQKML 467
            A+EE +   D  K+  E      +T   A AI  + +VL     D     E   ++KEEAIY LAK +AD+  F +V+ LLK ++ +F  +PKA+TAKIVRTIIDIV+KVP+S++LQ  LC++VVAWC  +KR FLRQRI+SR A LLF +G Y +A++L+NKLLRELK+ DDKQLLVETHL+EAR+ +ALRN PKAKAALTAARTAGNSIY+ P MQAELD MSG LHCEEGDYKTS SYFLE++EAFDS  D RA + L+YM+LC +LQG+  EV A+   K G+K+ G  + A+  +A +AK RSLE FD A   +G  L  DLL+KHH+ I+Y+QLLESNLLKII+PFSCVE+ HVA LI LP   VE KLSQMILD K+LG LDQG+GQL++YE +  DK +T GLEV+ N+G VV+SLF R QK L
Sbjct:   15 AVEEYDEGRDLRKKLDEITAALGETGDQAAAILGYREVLDYVCTDAAGPSESVGKVKEEAIYGLAKAYADSRRFSDVVDLLKTASPFFGTIPKARTAKIVRTIIDIVSKVPDSLELQDALCRQVVAWCKTEKRNFLRQRIQSRQAGLLFEQGKYQNAVALLNKLLRELKRMDDKQLLVETHLVEARVHNALRNTPKAKAALTAARTAGNSIYISPIMQAELDDMSGTLHCEEGDYKTSFSYFLESYEAFDSQEDSRALRSLKYMLLCKVLQGSASEVGAILAGKWGVKHTGAELDAMSEVAKSAKNRSLEEFDAAVSVHGKTLEKDLLIKHHLGILYDQLLESNLLKIIQPFSCVELDHVAELIKLPVDKVELKLSQMILDKKLLGILDQGKGQLVIYEEAVGDKVFTDGLEVMSNMGAVVNSLFSRVQKNL 446

[Close]

BLAST of NO07G03800 vs. NCBI_GenBank
Match: XP_012196515.1 (hypothetical protein SPRG_02556 [Saprolegnia parasitica CBS 223.65] >KDO32863.1 hypothetical protein SPRG_02556 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 418.7 bits (1075), Expect = 2.500e-113
Identity = 235/432 (54.40%), Postives = 300/432 (69.44%), Query Frame = 0

Query:   45 EESKPDPLKEALEAAE---EQAQTHPAQAIAAFHDVL--HTPNRDDEVAQRIKEEAIYRLAKLHADAHGFREVMALLKDSNDYFALVPKAKTAKIVRTIIDIVTKV-----PNSVDLQVELCKEVVAWCIAQKRTFLRQRIESRLAALLFLRGDYTDALSLINKLLRELKKFDDKQLLVETHLIEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKTSHSYFLEAFEAFDSLSDPRARKCLEYMMLCSILQGTPQEVSA-VTSKHGLKYAGEGMSALVAIAAAAKARSLELFDGAREEYGGVLAGDLLMKHHVHIVYEQLLESNLLKIIEPFSCVEISHVASLINLPEKTVEKKLSQMILDDKILGTLDQGQGQLLVYEGSGLDKTYTHGLEVIGNLGMVVDSLFRRAQKM 466
            E  K   L+EA +AAE   E+ ++ P ++IAAF  VL  H P+ D EV  R+KE AIY+L +L+      +E+  LL+    +FA +PKAKT KIVRTIID+V+KV       S+  Q +LC + +AWC  +K TFLRQRI++RLA++LF +  Y  AL LI  LLRE+KK DDKQLLVE HL+E+++ HALRN+PKAKAALTAAR+  NSIY+VP MQA +D MSG+LH EE DYKT++SYF EAFEA   +    A  CL+YM+L  I  G   +V   V  K+ +K++G  + AL AIA A   RSLELF  A  +Y   L  D L+KHH+ ++YE LLESNL+KII+P+SCVEISHVA+LI LP   VE KLSQMILD K  G LDQG+GQL+VYE +  DKTY  GL VI N+G VV +LFRRA K+
Sbjct:   12 EALKKHQLQEAFDAAEEEMEEGRSTPDRSIAAFQHVLAYHGPDEDLEVVHRVKEHAIYKLGQLYTRHGREKELSTLLQSVRPFFATIPKAKTGKIVRTIIDMVSKVETLDHQKSLQFQADLCVDSIAWCNLEKHTFLRQRIQARLASILFEQAKYQTALDLITDLLREIKKLDDKQLLVEIHLVESKLFHALRNVPKAKAALTAARSIANSIYIVPKMQANIDHMSGILHAEERDYKTAYSYFFEAFEALAPIDKTEALACLKYMLLSKIANGHSADVPVIVNGKNAIKFSGIDVEALKAIAKAHDKRSLELFQAATAQYAAQLVQDPLIKHHLGLLYENLLESNLIKIIQPYSCVEISHVATLIKLPLPQVETKLSQMILDHKFHGILDQGRGQLIVYESATEDKTYAAGLGVIQNVGNVVGTLFRRADKL 443

[Close]

BLAST of NO07G03800 vs. NCBI_GenBank
Match: OQR90901.1 (26S proteasome non-ATPase regulatory subunit 11-like, partial [Thraustotheca clavata])

HSP 1 Score: 416.0 bits (1068), Expect = 1.600e-112
Identity = 224/413 (54.24%), Postives = 289/413 (69.98%), Query Frame = 0

Query:   61 EQAQTHPAQAIAAFHDVL--HTPNRDDEVAQRIKEEAIYRLAKLHADAHGFREVMALLKDSNDYFALVPKAKTAKIVRTIIDIVTKV-----PNSVDLQVELCKEVVAWCIAQKRTFLRQRIESRLAALLFLRGDYTDALSLINKLLRELKKFDDKQLLVETHLIEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKTSHSYFLEAFEAFDSLSDPRARKCLEYMMLCSILQGTPQEVSA-VTSKHGLKYAGEGMSALVAIAAAAKARSLELFDGAREEYGGVLAGDLLMKHHVHIVYEQLLESNLLKIIEPFSCVEISHVASLINLPEKTVEKKLSQMILDDKILGTLDQGQGQLLVYEGSGLDKTYTHGLEVIGNLGMVVDSLFRRAQKM 466
            E+ +  P ++IAAF  +L  H  + D E   R+KE +IY+L +L+      +E+  LL+    +F+ +PKAKT KIVRTIID+V+KV       S+  Q +LC + +AWC  +K TFLRQRI++RLA++LF +  Y  AL LI +LLRE+KK DDKQLLVE HL+EA++ HALRN+PKAKAALTAAR+  NSIY+VP MQA +D MSG+LH EE DYKT++SYF EAFEA  +L    A  CL+YM+L  I  G   +V   V  K  +K+AG  + A  AIA A   RS+ELF  A  +Y   L  D L+KHH+H++YE LLESNL+KII+P+SCVEISHVA+LI LP   VE KLSQMILD K  G LDQG+GQL+VYE +  DKTY  GL VI N+G +VD+LFRRA K+
Sbjct:    1 EEGRASPERSIAAFQRILAYHGDDEDLEAVHRVKEHSIYKLGQLYTRHGREKELATLLQSVRPFFSTIPKAKTGKIVRTIIDMVSKVEALEHDKSLQFQADLCIDSIAWCNLEKHTFLRQRIQARLASILFEQAKYQTALDLITELLREIKKLDDKQLLVEIHLVEAKLYHALRNVPKAKAALTAARSIANSIYIVPRMQANIDHMSGILHAEERDYKTAYSYFFEAFEALSNLDKTEALACLKYMLLSKIANGQSGDVPVIVNGKSAIKFAGVDVEAFKAIAKAHDQRSIELFQAATTQYSAQLIQDPLVKHHLHLLYENLLESNLIKIIQPYSCVEISHVATLIKLPLPQVETKLSQMILDHKFHGILDQGRGQLIVYESATEDKTYAAGLGVIQNVGNIVDTLFRRADKL 413

[Close]

BLAST of NO07G03800 vs. NCBI_GenBank
Match: XP_008609596.1 (26S proteasome regulatory subunit N6 [Saprolegnia diclina VS20] >EQC36815.1 26S proteasome regulatory subunit N6 [Saprolegnia diclina VS20])

HSP 1 Score: 412.9 bits (1060), Expect = 1.400e-111
Identity = 232/432 (53.70%), Postives = 296/432 (68.52%), Query Frame = 0

Query:   45 EESKPDPLKEALEAAE---EQAQTHPAQAIAAFHDVL--HTPNRDDEVAQRIKEEAIYRLAKLHADAHGFREVMALLKDSNDYFALVPKAKTAKIVRTIIDIVTKV-----PNSVDLQVELCKEVVAWCIAQKRTFLRQRIESRLAALLFLRGDYTDALSLINKLLRELKKFDDKQLLVETHLIEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKTSHSYFLEAFEAFDSLSDPRARKCLEYMMLCSILQGTPQEVSA-VTSKHGLKYAGEGMSALVAIAAAAKARSLELFDGAREEYGGVLAGDLLMKHHVHIVYEQLLESNLLKIIEPFSCVEISHVASLINLPEKTVEKKLSQMILDDKILGTLDQGQGQLLVYEGSGLDKTYTHGLEVIGNLGMVVDSLFRRAQKM 466
            E  K   L+E  +AAE   E+ +  P ++IAAF  VL  H P+ D E   R+KE AIY+L +L+      +E+  LL+    +F  +PKAKT KIVRTIID+V+KV       S+  Q +LC + +AWC  +K TFLRQRI++RLA++LF +  Y  AL LI  LLRE+KK DDKQLLVE HL+E+++ HALRN+PKAKAALTAAR+  NSIY+VP MQA +D MSG+LH EE DYKT++SYF EAFEA   +    A  CL+YM+L  I  G   +V   V  K+ +K++G  + AL AIA A   RSLELF  A  +Y   L  D L+KHH+ ++YE LLESNL+KII+P+SCVEISHVA+LI LP   VE KLSQMILD K  G LDQG+GQL+VYE +  DKTY  GL VI N+G VV +LFRRA K+
Sbjct:   12 EALKKHQLQEDFDAAEEEMEEGRATPDRSIAAFQRVLAYHGPDEDLEAVHRVKEHAIYKLGQLYTRHGREKELATLLQSVRPFFTTIPKAKTGKIVRTIIDMVSKVETLDHQKSLQFQADLCVDSIAWCNLEKHTFLRQRIQARLASILFEQAKYQTALDLITDLLREIKKLDDKQLLVEIHLVESKLFHALRNVPKAKAALTAARSIANSIYIVPKMQANIDHMSGILHAEERDYKTAYSYFFEAFEALAPIDKTEALACLKYMLLSKIANGHSADVPVIVNGKNAIKFSGIDVEALKAIAKAHDKRSLELFQAATSQYAAQLVQDPLIKHHLGLLYENLLESNLIKIIQPYSCVEISHVATLIKLPLPQVETKLSQMILDHKFHGILDQGRGQLIVYESATEDKTYAAGLGVIQNVGNVVGTLFRRADKL 443

[Close]

BLAST of NO07G03800 vs. NCBI_GenBank
Match: OQR99089.1 (hypothetical protein ACHHYP_07377 [Achlya hypogyna])

HSP 1 Score: 409.5 bits (1051), Expect = 1.500e-110
Identity = 232/433 (53.58%), Postives = 299/433 (69.05%), Query Frame = 0

Query:   45 EESKPDPLKEALEAAE---EQAQTHPAQAIAAFHDVL--HTPNRDDEVAQRIKEEAIYRLAKLHADAHGF-REVMALLKDSNDYFALVPKAKTAKIVRTIIDIVTKV-----PNSVDLQVELCKEVVAWCIAQKRTFLRQRIESRLAALLFLRGDYTDALSLINKLLRELKKFDDKQLLVETHLIEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKTSHSYFLEAFEAFDSLSDPRARKCLEYMMLCSILQGTPQEVSA-VTSKHGLKYAGEGMSALVAIAAAAKARSLELFDGAREEYGGVLAGDLLMKHHVHIVYEQLLESNLLKIIEPFSCVEISHVASLINLPEKTVEKKLSQMILDDKILGTLDQGQGQLLVYEGSGLDKTYTHGLEVIGNLGMVVDSLFRRAQKM 466
            E  K   L+E  +AAE   E+ +  P ++IAAF  +L  +  + D E   R+KE AIY+L +L+   HG  +E+  LL+    +F  +PKAKT KIVRTIID+V+KV       S+  Q +LC + +AWC  +K TFLRQRI++RLA++LF +  Y  AL LI +LLRE+KK DDKQLLVE HL+E+++ HALRN+PKAKAALTAAR+  NSIY+VP MQA +D MSG+LH EE DYKT+ SYF EAFEA  S+    A  CL+YM+L  +  G   +V   V  K+ +K++G  + AL AIA A + RSLELF  A  +Y   L  D L+KHH+ ++YE LLESNL+KII+P+SCVEISHVASLI LP   VE KLSQMILD K  G LDQG+GQL+VYE +  DKTY  GL VI N+G VV +LFRRA K+
Sbjct:   12 EAVKKHKLQEDFDAAEEEMEEGRASPERSIAAFQRILAYNGDDADLEAVHRVKEHAIYKLGQLYT-RHGLEKELATLLQSVRPFFTTIPKAKTGKIVRTIIDMVSKVETLDRQKSLQFQADLCIDSIAWCNLEKHTFLRQRIQARLASILFEQAKYQAALDLITELLREIKKLDDKQLLVEIHLVESKLYHALRNVPKAKAALTAARSIANSIYIVPKMQANIDHMSGILHAEERDYKTAFSYFFEAFEALASIDKTEALACLKYMLLSKVANGQSADVPVIVNGKNAIKFSGIDVEALKAIAKAHEKRSLELFQAATAQYSAQLVQDPLIKHHLGLLYENLLESNLIKIIQPYSCVEISHVASLIKLPLPQVETKLSQMILDHKFHGILDQGRGQLIVYESATEDKTYAAGLGVIQNVGNVVGTLFRRADKL 443

[Close]

BLAST of NO07G03800 vs. NCBI_GenBank
Match: CCA18920.1 (PREDICTED: hypothetical protein isoform 2 [Albugo laibachii Nc14])

HSP 1 Score: 405.2 bits (1040), Expect = 2.800e-109
Identity = 223/427 (52.22%), Postives = 295/427 (69.09%), Query Frame = 0

Query:   51 PLKEALEAAEE-----QAQTHPAQAIAAFHDVL-HTPNRDDEVAQRIKEEAIYRLAKLHADAHGFREVMALLKDSNDYFALVPKAKTAKIVRTIIDIVTKV-----PNSVDLQVELCKEVVAWCIAQKRTFLRQRIESRLAALLFLRGDYTDALSLINKLLRELKKFDDKQLLVETHLIEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKTSHSYFLEAFEAFDSLSDPRARKCLEYMMLCSILQGTPQEV-SAVTSKHGLKYAGEGMSALVAIAAAAKARSLELFDGAREEYGGVLAGDLLMKHHVHIVYEQLLESNLLKIIEPFSCVEISHVASLINLPEKTVEKKLSQMILDDKILGTLDQGQGQLLVYEGSGLDKTYTHGLEVIGNLGMVVDSLFRRAQKM 466
            PL   LE  E+        + P  AI + H+++ H  N   E   R KE+AIY+L++L+      +E+  LL+    +F L+PKAKT KIVRT+ID+++KV       ++ LQ +LC + + WCI +K TFLRQR+ESRLA++LF +G Y +AL LI+ LLRE+KK DDKQLLVE HL+E+++ HALRN+ KAKAALTAAR+  N+IYV+P  QA++D MSG+LH EE DYKTS+SYF E+FEA   L+DP A  CL+YM+LC I  G   EV S +  K   KY+G  + AL A+A A + RSLELF      Y   L  D L+K+H+  +YE+LLESNL+KII+PFS VEI HVA LINLP K +E KLSQMILD K  G LDQG+GQL+VY+    DKTYT GL VI N+G++VDSL+R ++ +
Sbjct:   17 PLSVKLEETEDCIAALTTNSSPDHAIRSLHEIISHEENPLVEAVVRAKEKAIYKLSQLYIQFGREKELGNLLQSLGPFFLLIPKAKTGKIVRTVIDMISKVEALDQEKALQLQADLCHDSIDWCIKEKHTFLRQRVESRLASILFQQGKYQEALDLISGLLREIKKLDDKQLLVEIHLVESKLYHALRNIAKAKAALTAARSISNAIYVIPKTQAQIDMMSGILHAEEYDYKTSYSYFFESFEALAQLNDPAALLCLKYMLLCKIACGDAHEVNSVINGKQATKYSGIDIVALQAVAKAHQKRSLELFQETTTNYADQLVRDPLIKNHLGKLYERLLESNLIKIIQPFSRVEIEHVAKLINLPSKQIELKLSQMILDHKFHGILDQGKGQLIVYDNPVEDKTYTAGLGVIRNVGVIVDSLYRLSENL 443

[Close]

BLAST of NO07G03800 vs. NCBI_GenBank
Match: CCI45149.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 404.4 bits (1038), Expect = 4.800e-109
Identity = 223/427 (52.22%), Postives = 297/427 (69.56%), Query Frame = 0

Query:   51 PLKEALEAAEE-----QAQTHPAQAIAAFHDVL-HTPNRDDEVAQRIKEEAIYRLAKLHADAHGFREVMALLKDSNDYFALVPKAKTAKIVRTIIDIVTKV-----PNSVDLQVELCKEVVAWCIAQKRTFLRQRIESRLAALLFLRGDYTDALSLINKLLRELKKFDDKQLLVETHLIEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKTSHSYFLEAFEAFDSLSDPRARKCLEYMMLCSILQGTPQEV-SAVTSKHGLKYAGEGMSALVAIAAAAKARSLELFDGAREEYGGVLAGDLLMKHHVHIVYEQLLESNLLKIIEPFSCVEISHVASLINLPEKTVEKKLSQMILDDKILGTLDQGQGQLLVYEGSGLDKTYTHGLEVIGNLGMVVDSLFRRAQKM 466
            PL   LE  EE       ++ P  AI + H+++ H      E   R+KE+AIY+L++L+      +E+  LL+    +F ++PKAKT KIVRT+ID+++KV       ++ LQ +LC + + WC  +K TFLRQR+ESRLA++LF +G Y +AL LI+ LLRE+KK DDKQLLVE HLIE+++ HALRN+ KAKAALTA+R+  N+IYVVP  QA++D MSG+LH EE DYKTS+SYF E+FEA   L++P A  CL+YM+LC I  G   EV S +  K   KY+G  + AL A+A A + RSLELF     +Y   L  D L+K+H+  +YE+LLESNL+KII+PFSCVEI HVA LINLP K +E KLSQMILD K  G LDQG+GQL+VY+    DKTYT GL VI N+G+VVDSL+R ++ +
Sbjct:   17 PLCVKLEETEELIAGLTRKSSPDHAIRSLHEIISHEEKPMIETVLRVKEKAIYKLSQLYIQFGREKELGNLLQSLGAFFLIIPKAKTGKIVRTVIDMISKVEALDQDKALKLQADLCYDSIDWCKKEKHTFLRQRVESRLASILFQQGKYQEALDLISGLLREIKKLDDKQLLVEIHLIESKLYHALRNIAKAKAALTASRSISNAIYVVPKTQAQIDMMSGILHAEEYDYKTSYSYFFESFEALAQLNEPSALLCLKYMLLCKIACGDAHEVNSVINGKQAAKYSGIDIEALQAVAKAHEKRSLELFQETTSKYAAQLVHDPLIKNHLGKLYERLLESNLIKIIQPFSCVEIEHVAKLINLPSKQIEIKLSQMILDHKFHGILDQGKGQLIVYDDPVEDKTYTAGLGVIKNVGVVVDSLYRLSENL 443

[Close]

BLAST of NO07G03800 vs. NCBI_GenBank
Match: XP_009032483.1 (hypothetical protein AURANDRAFT_19341 [Aureococcus anophagefferens] >EGB12852.1 hypothetical protein AURANDRAFT_19341 [Aureococcus anophagefferens])

HSP 1 Score: 402.5 bits (1033), Expect = 1.800e-108
Identity = 216/394 (54.82%), Postives = 277/394 (70.30%), Query Frame = 0

Query:   86 EVAQRIKEEAIYRLAKLHADAHGFREVMALLKDSNDYFALVPKAKTAKIVRTIIDIVTKV-PNSVDLQVELCKEVVAWCIAQKRTFLRQRIESRLAALLFLRGDYTDALSLINKLLRELKKFDDKQLLVETHLIEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKTSHSYFLEAFEAFDSLSD-PRARKCLEYMMLCSILQ------------GTPQEVSAVTSKHGLKYAGEGMSALVAIAAAAKARSLELFDGAREEYGGVLAGDLLMKHHVHIVYEQLLESNLLKIIEPFSCVEISHVASLINLPEKTVEKKLSQMILDDKILGTLDQGQGQLLVYEGSGLDKTYTHGLEVIGNLGMVVDSLFRRAQKM 466
            E   R+KE+ IY LA L+  +  F  V+ LL  +  +FALV KAK AKIVR +++IV +  P ++DLQ +LC  V+AWC+A+KRTFLRQR+E RL A+ F R  Y  AL+L+N+LLRELKK DDKQLLVETHL EAR+  AL+N+PKAKAALTAAR  GN++YV P++QA+LD+MSG LHCEE DY T+HSYFLEA+E +D L D PRA +CL+YM+LC ILQ                  +A TSK  +KYAG  + A+  +A AAKARSLE F+     YG  L  DLL+KHH+ ++Y+ +LE+NL KIIEPFSCVEI  VA LI LP+  VEKKL+QMILD K+ G L QG+G+L+++     D TY   L VI N   VV+SLF RA+ +
Sbjct:   34 EAGVRLKEDCIYALATLNVGSGNFDFVVGLLSTAAPFFALVAKAKVAKIVRRLLEIVGESGPGTLDLQADLCGRVIAWCVAEKRTFLRQRVECRLVAIDFERAKYDAALTLVNRLLRELKKLDDKQLLVETHLSEARLHAALQNIPKAKAALTAARANGNAVYVGPSLQAQLDEMSGTLHCEEQDYHTAHSYFLEAYEGYDGLDDGPRATRCLKYMLLCQILQEPEPGSARSATASLDAATAAATSKQYVKYAGPQLDAMAGVARAAKARSLEAFEATTSRYGAELQADLLIKHHLGLLYDTILENNLAKIIEPFSCVEIDRVAELIALPKPKVEKKLAQMILDKKLTGVLAQGEGRLMLHTEPNEDPTYEASLAVIKNTADVVESLFGRAEAL 427

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BLAST of NO07G03800 vs. NCBI_GenBank
Match: ETP48574.1 (hypothetical protein F442_05708 [Phytophthora parasitica P10297])

HSP 1 Score: 400.6 bits (1028), Expect = 7.000e-108
Identity = 225/444 (50.68%), Postives = 302/444 (68.02%), Query Frame = 0

Query:   35 TTNANAAMEEEESKPDPLKEALEAAEEQA-----QTHPAQAIAAFHDVLHTPNRDD--EVAQRIKEEAIYRLAKLHADAHGFREVMALLKDSNDYFALVPKAKTAKIVRTIIDIVTKV-----PNSVDLQVELCKEVVAWCIAQKRTFLRQRIESRLAALLFLRGDYTDALSLINKLLRELKKFDDKQLLVETHLIEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKTSHSYFLEAFEAFDSLSDPRARKCLEYMMLCSILQGTPQEVS-AVTSKHGLKYAGEGMSALVAIAAAAKARSLELFDGAREEYGGVLAGDLLMKHHVHIVYEQLLESNLLKIIEPFSCVEISHVASLINLPEKTVEKKLSQMILDDKILGTLDQGQGQLLVYEGSGLDKTYTHGLEVIGNLGMVVDSLFRRAQKM 466
            TT  +  M E E +  PL+   E AE+ A      T P  AI AF  ++     D   E  QR+KE +IY+LA+L+      +E+ +LL+    +FA + +AKT KIVRT+ID+V KV      N++ LQ +LC + + WC  +K TFLRQR+E+RLA++ F +  +  AL LI +LL E+KK DDKQLLVE HL+E+++ HALRN+PKAKAALTAAR+  N+IYVVP  QA++DQMSG+LH EE DYKT++SYF EAFEA  +L +    KCL+YM+L  +  G   EV+  + SK  +K+ G  + A+ A+A A + RSLE F+ A ++Y   L  D L+K+H+  +YEQLLESNL+KII+PFSCVEI+HVA LI LP   +E KLSQMILD K  G LDQG+GQL+VY+    DKTYT GL VI N+G +VD+LFRRA K+
Sbjct:    2 TTTQDVEMAEPE-QVHPLQTQFEDAEDLAVDLTPSTSPNAAIEAFQSIISYAGEDAMLEQVQRVKEHSIYKLAQLYIQFGREKELASLLQALRPFFATLARAKTGKIVRTVIDMVAKVKVLDAENALQLQADLCIDSIEWCKQEKHTFLRQRVEARLASIYFQQNKFQPALDLITELLHEIKKLDDKQLLVEIHLVESKLHHALRNVPKAKAALTAARSISNTIYVVPRTQAQIDQMSGILHAEERDYKTAYSYFFEAFEALATLDEVEGLKCLKYMLLAKVASGGASEVNLIINSKQAIKFIGVDLEAMQAVAKAHEQRSLEQFEAATKKYAPQLVEDPLIKNHLGKLYEQLLESNLIKIIQPFSCVEIAHVAKLIKLPLPQIELKLSQMILDHKFHGILDQGKGQLIVYDSPVEDKTYTSGLGVIENVGHIVDNLFRRADKL 444

The following BLAST results are available for this feature:

BLAST of NO07G03800 vs. NCBI_GenBank

BLAST of NO07G03800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM26981.1	1.700e-207	79.38	26s proteasome non-atpase regulatory subunit 11 [N...	[more]
CBJ31312.1	5.100e-127	59.03	expressed unknown protein [Ectocarpus siliculosus]	[more]
XP_012196515.1	2.500e-113	54.40	hypothetical protein SPRG_02556 [Saprolegnia paras...	[more]
OQR90901.1	1.600e-112	54.24	26S proteasome non-ATPase regulatory subunit 11-li...	[more]
XP_008609596.1	1.400e-111	53.70	26S proteasome regulatory subunit N6 [Saprolegnia ...	[more]
OQR99089.1	1.500e-110	53.58	hypothetical protein ACHHYP_07377 [Achlya hypogyna...	[more]
CCA18920.1	2.800e-109	52.22	PREDICTED: hypothetical protein isoform 2 [Albugo ...	[more]
CCI45149.1	4.800e-109	52.22	unnamed protein product [Albugo candida]	[more]
XP_009032483.1	1.800e-108	54.82	hypothetical protein AURANDRAFT_19341 [Aureococcus...	[more]
ETP48574.1	7.000e-108	50.68	hypothetical protein F442_05708 [Phytophthora para...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL100	nonsL100	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR071	ncniR071	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR130	ngnoR130	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK000469	NSK000469	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO07G03800.1	NO07G03800.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|581302	gene_2723	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100127g9	gene3562	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO07G03800.1	NO07G03800.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO07G03800 ID=NO07G03800|Name=NO07G03800|organism=Nannochloropsis oceanica|type=gene|length=2607bp
TCATGGATAATACTTTCTTTTGTACTACCTACCATGCTGCCTTTGCAAAT
TGTTCGTTTTGGGGACTCAGCAGATGACGAGGACGAAAGGCTATATCGCA
AATTATTATCTCCTTGGTCACTTGTCTGCACAACTGCTTTCGCGGCGGTG
GCCTGAGAGCTTCATTACTTCACCTTTATATACCGAAGCAGGGAAAGTAT
GCAGTACACCTCTACAAAGTCGGTCTCAATTTACTGCAAGGACTCCATGC
CCTGCATTCCTCCACTTTTTTTTTTCTTTCAAGAGGGGACAAGGACGAGG
GGGGAGGTCACCGACGAGGATGTCGCTACTTCCCCCTCCAATCGCATCCG
TGCCTCCATGATGCTTCACAATCATCCAGTATTCAGTCCAAAATCTGTTG
GTCGCCCAATTTTATACTTTTACGCCTTAAAAGCGCACCTAAACCAATGC
AAGGTACCCTTTTCCACTCTCGCTGCCATCATCGCCAACATCCAGAATTC
TTCGAAGCAGTCCGTGCTCTTTCCTACATGCCCGATCAACCCCACACACA
CAGCCATCATCCACCACCCTACAAACTCCCATGCATATAGACATAAAAAT
GGCGGGGGCAGATACAATGGACATCTCCCCAGGCAGCGGGGTGGAGGAGA
CCAAAACGTCGGGAGAGTCCAAACGCCAAACTACGACGAATGCCAACGCG
GCGATGgtacgttttcaggctgtgtttttcagtacatgcatcgaggttgt
atgtcctgagtgttgcggaagctttttgtgaaagtgatcagtgttttagg
aatgatgcctgtactttttgggggctctgctttggccggctctctgtctc
tcttctttcgcctttccttcagacgtagccccggcgttttcatcatctct
ctgcacctgctgtctgcaagcaagcctagctcctgagcattttcagcctg
cacaggctcgcgtgtctctttctgtcttcgtgctcctgccacgttccatt
tcttggtgtcaagtctttgtaaggtcacacttacgcacctcttctccctt
ccatcccttttcccacctcaaccagGAGGAAGAAGAAAGCAAGCCCGACC
CCCTCAAGGAAGCTCTGGAGGCGGCCGAGGAACAAGCGCAGACGCACCCT
GCGCAAGCCATCGCCGCTTTCCATGATGTCCTCCACACCCCCAACCGGGA
CGATGAAGTCGCCCAACGCATCAAGGAAGAAGCCATCTACCGCCTGGCCA
AACTGCATGCCGACGCCCACGGCTTCCGCGAAGTCATGGCCCTGCTCAAG
GATAGTAATGACTATTTTGCCCTGGTTCCCAAGGCCAAGACAGCGAAGAT
CGTGAGGACAATAATCGATATTGTCACTAAGGTTCCCAACTCGGTGGACC
TGCAGGTGGAGCTGTGCAAGGAGgtaagcgaaggaaggaggaaggaatgt
ggaggggatggatgggcgtggggataatgctgtggatgactaccatcagc
gatatcagattgagatatcataaggtgaaaatcgttaaggtgggtgcacg
ctcatctccctccctccctccctccctctctccctccctttttagGTCGT
CGCTTGGTGCATCGCCCAGAAACGGACCTTCCTGCGTCAACGCATCGAGT
CCCGACTCGCAGCCCTCCTCTTCCTCCGCGGGGATTACACGGACGCCCTC
TCCCTGATCAATAAACTTTTGCGCGAACTCAAAAAATTCGACGACAAGCA
ATTGCTTGTGGAGACCCACCTGATCGAGGCGCGCATTGACCACGCCTTGC
GCAACCTTCCCAAGGCCAAGGCCGCCCTGACCGCGGCCCGTACGGCAGGT
AACTCCATCTACGTCGTCCCTGCTATGCAAGCCGAGCTGGACCAGATGTC
GGGTGTGCTGCACTGCGAGGAAGGTGACTACAAGACGTCCCATTCCTATT
TCCTGGAGGCATTTGAGGCCTTCGATTCCTTGTCGGATCCTCGCGCACGC
AAGTGCCTGGAGTACATGATGCTGTGCTCCATCTTGCAAGGAACGCCCCA
GGAGGTGTCGGCAGTGACGAGCAAGCACGGGCTGAAATACGCGGGGGAGG
GAATGAGTGCTCTAGTGGCGATAGCGGCCGCGGCGAAGGCGCGAAGTTTG
GAGCTATTCGACGGGGCAAGGGAGGAATATGGGGGGGTGTTGGCGGGGGA
TTTGTTGATGAAGCACCACGTGCACATCGTGTATGAGCAGCTGCTGGAGT
CGAATCTGTTGAAGATTATTGAGCCCTTTTCGTGCGTGGAGATAAGTCAT
GTGGCGTCTCTCATCAACCTGCCGGAGAAGACGGTGGAAAAGAAGTTGTC
GCAGATGATTCTGGATGACAAGATATTGGGGACGTTGGACCAGGGGCAGG
GGCAGCTGCTGGTGTATGAGGGTAGTGGCTTGGATAAGACGTACACGCAT
GGGTTGGAGGTGATTGGAAATTTGGGGATGGTTGTGGACAGCTTGTTCAG
GCGGGCGCAGAAAATGTTGCACTCAGGGCATGTGGTGGGAGGGGTGGGAG
GAAGTGGGGAAGGGCCGGTGGAGAGTGCGTAAGATTGAAGAGGGTTTTTG
TAGGGAC

protein sequence of NO07G03800.1

>NO07G03800.1-protein ID=NO07G03800.1-protein|Name=NO07G03800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=487bp
MHIDIKMAGADTMDISPGSGVEETKTSGESKRQTTTNANAAMEEEESKPD
PLKEALEAAEEQAQTHPAQAIAAFHDVLHTPNRDDEVAQRIKEEAIYRLA
KLHADAHGFREVMALLKDSNDYFALVPKAKTAKIVRTIIDIVTKVPNSVD
LQVELCKEVVAWCIAQKRTFLRQRIESRLAALLFLRGDYTDALSLINKLL
RELKKFDDKQLLVETHLIEARIDHALRNLPKAKAALTAARTAGNSIYVVP
AMQAELDQMSGVLHCEEGDYKTSHSYFLEAFEAFDSLSDPRARKCLEYMM
LCSILQGTPQEVSAVTSKHGLKYAGEGMSALVAIAAAAKARSLELFDGAR
EEYGGVLAGDLLMKHHVHIVYEQLLESNLLKIIEPFSCVEISHVASLINL
PEKTVEKKLSQMILDDKILGTLDQGQGQLLVYEGSGLDKTYTHGLEVIGN
LGMVVDSLFRRAQKMLHSGHVVGGVGGSGEGPVESA*

Synonyms

Publications