NO07G03770, NO07G03770 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G03770 vs. NCBI_GenBank
Match: EWM26990.1 (START-like domain protein [Nannochloropsis gaditana]) HSP 1 Score: 201.1 bits (510), Expect = 4.300e-48 Identity = 104/166 (62.65%), Postives = 119/166 (71.69%), Query Frame = 0 Query: 90 DVVVDVDKYKLFLPYCTQSKVLRRIPPNFILAQLLVGFNNVLNERYTSRIRVERPKSIVIAALDSHIFTRLESTWQFQP-----------GPAFAAEXXXXXXXXXXXHVDFRVRFEVSNPLTQAAIDLIFADLVERQIHAFEDRCFAVYGEGIEGGKMRKKIGEE 245 DVV DVD YK FLPYCTQS VLRR+PPNF+LAQL+VGFNN+L E+YTSR+R++RP+SI IAALDS IFTRLESTW FQP G A HVDFR+RF+VSN L Q AID++F DLVERQIHAFEDRC AVYG G GK ++ GEE Sbjct: 19 DVVADVDNYKSFLPYCTQSAVLRRVPPNFMLAQLIVGFNNLLKEKYTSRVRLDRPRSITIAALDSKIFTRLESTWNFQPTWEDKEGGSGDGTA-GGRGKDTRKGDGCTHVDFRIRFQVSNSLAQKAIDMVFEDLVERQIHAFEDRCHAVYGSG--AGKGGREDGEE 181
BLAST of NO07G03770 vs. NCBI_GenBank
Match: OWZ24364.1 (hypothetical protein PHMEG_000599 [Phytophthora megakarya]) HSP 1 Score: 131.0 bits (328), Expect = 5.400e-27 Identity = 71/157 (45.22%), Postives = 93/157 (59.24%), Query Frame = 0 Query: 75 HRVTRVVPFTCEQLFDVVVDVDKYKLFLPYCTQSKVLRRIPPNFILAQLLVGFNNVLNERYTSRIRVERPKSIVIAALDSHIFTRLESTWQFQPGPAFAAEXXXXXXXXXXXHVDFRVRFEVSNPLTQAAIDLIFADLVERQIHAFEDRCFAVYGEG 232 H TRVVPF+C ++FDVV DVD+Y FLP+C +S+VLRR N + A L VGF N+ E YTSR+ + RP I + A+DS F R+ES W F+P + +DF+V FEVS+ L AI L F D+ Q++AF R VYG G Sbjct: 36 HTETRVVPFSCSEMFDVVADVDRYSEFLPFCVESRVLRRPNDNVMEAALRVGF-NIFTESYTSRVLMIRPNKIAVKAIDSPTFKRIESEWIFKPYTTSGS-----------CKIDFKVTFEVSSFLHANAIQLFFDDVALTQLNAFIGRARKVYGTG 180
BLAST of NO07G03770 vs. NCBI_GenBank
Match: ETI34580.1 (hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETL81600.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETM34812.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETP32610.1 hypothetical protein, variant 1 [Phytophthora parasitica P10297]) HSP 1 Score: 121.3 bits (303), Expect = 4.300e-24 Identity = 68/155 (43.87%), Postives = 88/155 (56.77%), Query Frame = 0 Query: 75 HRVTRVVPFTCEQLFDVVVDVDKYKLFLPYCTQSKVLRRIPPNFILAQLLVGFNNVLNERYTSRIRVERPKSIVIAALDSHIFTRLESTWQFQPGPAFAAEXXXXXXXXXXXHVDFRVRFEVSNPLTQAAIDLIFADLVERQIHAFEDRCFAVYG 230 H TRVVPF+C ++FDVV DV +Y FLP+C +S+VLRR N + A L VGF + E YTSR+ + RP I A+DS F R+ES W F+P VDF+V FEVS+ L AI L F D+ Q++AF R +YG Sbjct: 41 HTETRVVPFSCAEMFDVVADVQRYSEFLPFCVESRVLRRPNENVMEAALRVGF-KLFTESYTSRVLMIRPNKIATKAIDSPTFKRIESEWVFKP-----------CSTPGSCEVDFKVTFEVSSFLHANAIQLFFDDVALTQLNAFIGRARKMYG 183
BLAST of NO07G03770 vs. NCBI_GenBank
Match: XP_008896774.1 (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETN17190.1 hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETO63390.1 hypothetical protein, variant 1 [Phytophthora parasitica P1976]) HSP 1 Score: 121.3 bits (303), Expect = 4.300e-24 Identity = 68/155 (43.87%), Postives = 88/155 (56.77%), Query Frame = 0 Query: 75 HRVTRVVPFTCEQLFDVVVDVDKYKLFLPYCTQSKVLRRIPPNFILAQLLVGFNNVLNERYTSRIRVERPKSIVIAALDSHIFTRLESTWQFQPGPAFAAEXXXXXXXXXXXHVDFRVRFEVSNPLTQAAIDLIFADLVERQIHAFEDRCFAVYG 230 H TRVVPF+C ++FDVV DV +Y FLP+C +S+VLRR N + A L VGF + E YTSR+ + RP I A+DS F R+ES W F+P VDF+V FEVS+ L AI L F D+ Q++AF R +YG Sbjct: 41 HTETRVVPFSCAEMFDVVADVQRYSEFLPFCVESRVLRRPNENVMEAALRVGF-KLFTESYTSRVLMIRPNKIATKAIDSPTFKRIESEWVFKP-----------CSTPGSCEVDFKVTFEVSSFLHANAIQLFFDDVALTQLNAFIGRARKMYG 183
BLAST of NO07G03770 vs. NCBI_GenBank
Match: GAX98891.1 (Hypothetical protein PINS_006754 [Pythium insidiosum]) HSP 1 Score: 120.2 bits (300), Expect = 9.600e-24 Identity = 67/149 (44.97%), Postives = 90/149 (60.40%), Query Frame = 0 Query: 75 HRVTRVVPFTCEQLFDVVVDVDKYKLFLPYCTQSKVLRRIPPNFILAQLLVGFNNVLNERYTSRIRVERPKSIVIAALDSHIFTRLESTWQFQPGPAFAAEXXXXXXXXXXXHVDFRVRFEVSNPLTQAAIDLIFADLVERQIHAFEDR 224 HR T+VVPF+ E+++DVV DVDKY FLP+C S+VLRR N + A L +GF V E YTSR+ ++RP+ IVI +++S F R+ES W F+ P VDFRV FEV++ L AI L F D+ Q++AF R Sbjct: 64 HRETKVVPFSPEEMYDVVADVDKYHEFLPFCVDSRVLRRPNDNVMEAVLRIGF-KVFTEAYTSRVIMKRPEKIVIRSIESPTFKRIESEWHFRRLPT-----------PNTCEVDFRVTFEVASFLHANAIQLFFDDVAVTQLNAFIGR 200
BLAST of NO07G03770 vs. NCBI_GenBank
Match: CCA25311.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 112.5 bits (280), Expect = 2.000e-21 Identity = 65/166 (39.16%), Postives = 91/166 (54.82%), Query Frame = 0 Query: 75 HRVTRVVPFTCEQLFDVVVDVDKYKLFLPYCTQSKVLRRIPPNFILAQLLVGFNNVLNERYTSRIRVERPKSIVIAALDSHIFTRLESTWQFQPGPAFAAEXXXXXXXXXXXHVDFRVRFEVSNPLTQAAIDLIFADLVERQIHAFEDRCFAVYGEGIEGGKMRKK 241 H ++VVPF+ ++FDVV DV+ YK FLP+C +S+VLR+ N + A L +GF + E YTSR+ + RP I I +L+S F R+ES WQF+ V FRV FEV++ L AI L F D+ Q++AF R Y E + RK+ Sbjct: 50 HSESKVVPFSANEMFDVVADVNSYKEFLPFCVESRVLRKPNENVMEAMLRIGF-KIFTEAYTSRVIMNRPHKINIKSLESPTFKRIESEWQFK-----------QLENPYSCQVQFRVVFEVASFLHANAIKLFFEDVARTQLNAFIGRAGWKYNANHERNENRKR 203
BLAST of NO07G03770 vs. NCBI_GenBank
Match: XP_005648813.1 (hypothetical protein COCSUDRAFT_28720 [Coccomyxa subellipsoidea C-169] >EIE24269.1 hypothetical protein COCSUDRAFT_28720 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 110.5 bits (275), Expect = 7.600e-21 Identity = 57/161 (35.40%), Postives = 96/161 (59.63%), Query Frame = 0 Query: 70 GKTAEH-RVTRVVPFTCEQLFDVVVDVDKYKLFLPYCTQSKVLRRIPPNFILAQLLVGFNNVLNERYTSRIRVERPKSIVIAALDSHIFTRLESTWQFQPGPAFAAEXXXXXXXXXXXHVDFRVRFEVSNPLTQAAIDLIFADLVERQIHAFEDRCFAVYG 230 G T++H + R++ ++ +QL+DVV V+ YK F+P+C +S++++ PP+F+ A+L VGF + ERYTS++ + RP +V DS +F L+STW+F+PGP + + F V F +PL + + F ++V+ + AFE RC +YG Sbjct: 127 GDTSKHYQERRLIGYSPKQLYDVVAAVEHYKEFVPWCQRSEIIQERPPDFVEAELEVGF-KLFVERYTSQVHLHRPGKVVSHVYDSTLFDHLDSTWEFKPGPTPGSTW-----------LFFSVDFAFKSPLYRHIASVFFDEVVKHMMGAFEGRCKHLYG 275
BLAST of NO07G03770 vs. NCBI_GenBank
Match: XP_009837818.1 (hypothetical protein H257_12351 [Aphanomyces astaci] >XP_009837819.1 hypothetical protein, variant 1 [Aphanomyces astaci] >ETV72590.1 hypothetical protein H257_12351 [Aphanomyces astaci] >ETV72591.1 hypothetical protein, variant 1 [Aphanomyces astaci]) HSP 1 Score: 108.6 bits (270), Expect = 2.900e-20 Identity = 59/147 (40.14%), Postives = 85/147 (57.82%), Query Frame = 0 Query: 74 EHRVTRVVPFTCEQLFDVVVDVDKYKLFLPYCTQSKVLRRIPPNFILAQLLVGFNNVLNERYTSRIRVERPKSIVIAALDSHIFTRLESTWQFQPGPAFAAEXXXXXXXXXXXHVDFRVRFEVSNPLTQAAIDLIFADLVERQIHAF 221 EHR +VVPF C+ +FDVV +VD+Y FLP+C S+V+ R N + A L VGF + E Y SR+ +E P+ I+I +++S F +ES W F+P + E V+FRV FEV + L A+ L F D+ Q++AF Sbjct: 38 EHREKKVVPFPCQAMFDVVANVDEYVTFLPFCVTSRVVSRPSSNSMEADLTVGF-QIFTETYRSRVVLESPRRILIKSINSPTFKSIESEWTFRPVSTTSCE------------VNFRVSFEVGSILHAHAMRLFFDDVARVQLNAF 171
BLAST of NO07G03770 vs. NCBI_GenBank
Match: XP_009837820.1 (hypothetical protein, variant 2 [Aphanomyces astaci] >ETV72592.1 hypothetical protein, variant 2 [Aphanomyces astaci]) HSP 1 Score: 108.6 bits (270), Expect = 2.900e-20 Identity = 59/147 (40.14%), Postives = 85/147 (57.82%), Query Frame = 0 Query: 74 EHRVTRVVPFTCEQLFDVVVDVDKYKLFLPYCTQSKVLRRIPPNFILAQLLVGFNNVLNERYTSRIRVERPKSIVIAALDSHIFTRLESTWQFQPGPAFAAEXXXXXXXXXXXHVDFRVRFEVSNPLTQAAIDLIFADLVERQIHAF 221 EHR +VVPF C+ +FDVV +VD+Y FLP+C S+V+ R N + A L VGF + E Y SR+ +E P+ I+I +++S F +ES W F+P + E V+FRV FEV + L A+ L F D+ Q++AF Sbjct: 38 EHREKKVVPFPCQAMFDVVANVDEYVTFLPFCVTSRVVSRPSSNSMEADLTVGF-QIFTETYRSRVVLESPRRILIKSINSPTFKSIESEWTFRPVSTTSCE------------VNFRVSFEVGSILHAHAMRLFFDDVARVQLNAF 171
BLAST of NO07G03770 vs. NCBI_GenBank
Match: CCI49232.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 108.6 bits (270), Expect = 2.900e-20 Identity = 61/166 (36.75%), Postives = 92/166 (55.42%), Query Frame = 0 Query: 75 HRVTRVVPFTCEQLFDVVVDVDKYKLFLPYCTQSKVLRRIPPNFILAQLLVGFNNVLNERYTSRIRVERPKSIVIAALDSHIFTRLESTWQFQPGPAFAAEXXXXXXXXXXXHVDFRVRFEVSNPLTQAAIDLIFADLVERQIHAFEDRCFAVYGEGIEGGKMRKK 241 H T+VVPF+ +++FDVV DV+ YK FLP+C +S++LR+ N + A L +GF + E YTSR+ + RP I I +++S F R+ES W+F+ V FRV FEV++ L AI L F D+ Q++AF R Y E + +++ Sbjct: 57 HSETKVVPFSADEMFDVVADVNSYKEFLPFCVESRILRKPNENVMEAMLRIGF-KIFTEAYTSRVIMNRPHKINIKSVESPTFKRIESEWRFK-----------QLDDPYSCQVHFRVVFEVASFLHANAIKLFFEDVARTQLNAFIGRAGWKYNNDHERNEEKQR 210 The following BLAST results are available for this feature:
BLAST of NO07G03770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G03770 ID=NO07G03770|Name=NO07G03770|organism=Nannochloropsis oceanica|type=gene|length=2430bpback to top protein sequence of NO07G03770.1 >NO07G03770.1-protein ID=NO07G03770.1-protein|Name=NO07G03770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=256bpback to top Synonyms
Publications
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