NO07G03660, NO07G03660 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G03660 vs. NCBI_GenBank
Match: EWM27007.1 (zinc finger mynd domain-containing protein 19 [Nannochloropsis gaditana]) HSP 1 Score: 344.4 bits (882), Expect = 4.700e-91 Identity = 187/389 (48.07%), Postives = 234/389 (60.15%), Query Frame = 0 Query: 16 SPSSSAVLTPSPLPASSLESELARGLKLTEEXXXXXXXXXXXXXXKTSNRSNIQ-------------PNKQGITVLFEVDLQYAPLAEDADASATKRKCHLPSCPVTDGSSSTPLASCAQCKTVRYCGRVHQTQDWKLGHKHECAQWKTLRAMAVAAEVLASAELKGGADEEEAGLNXXXXXXXXXXXXXXXXXXXKAIYDEDIASPPSTDT---SSFPAATRAT-ASTFPLPL------NFDRQDIACKLLCKIRLHLGPYTIAHYDKQGRGFAFVQSTATAHDLFIARPITSKGRPLERSVLIHFLTWGEFISVVLEDDFEYTVAREPLQEALAVYDPEDEYVVLLKLRCGFLAVMRVPLVPDARACRKLAEDYQWADRTSVKLELD 382 SP S+ +SSLE+ELARGL+LT E N S PNK GI++LF+ DLQYAP +E + +T +KCHLP+C + +S L+ CAQCK RYCGR HQ DWK GHKHECAQWKTL AM ++ G ++ A ++ + TD S+ A++ A+ A+ P P+ D++D+A KLLCK+RLHLGPYT+AHYD+QGRGF F+QSTATA +L ++RPI G P++R VL+H+LTWGEF+SVVLEDDFEYTVAR PLQ ALA YDPE EYV ++KLRCGFL V RVPLVP A ACR+LAEDY WA+R SV LELD Sbjct: 4 SPQSADTKGMPSCSSSSLEAELARGLQLTAELTSYSKGKTNSTSSSGGNESPSSTNSSPVDSRQAAFPNKAGISILFDADLQYAPPSETDEEGSTLQKCHLPACTQIEDRASIRLSLCAQCKVARYCGRAHQVLDWKQGHKHECAQWKTLMAMKASSREADEPLPTAGGNKTNASKAQIPTEVEAPSLQTAEFPDVESTNESGSLKSTRTDEKHGSTLTASSAASEAAVSPRPVLSPSFSTLDKKDVASKLLCKLRLHLGPYTLAHYDRQGRGFGFLQSTATAGELLLSRPINRLGHPVQRHVLLHYLTWGEFVSVVLEDDFEYTVARTPLQAALAAYDPEVEYVAVVKLRCGFLGVFRVPLVPHAAACRRLAEDYAWAERASVTLELD 392
BLAST of NO07G03660 vs. NCBI_GenBank
Match: CBJ33540.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 141.7 bits (356), Expect = 4.600e-30 Identity = 64/145 (44.14%), Postives = 95/145 (65.52%), Query Frame = 0 Query: 235 DRQDIACKLLCKIRLHLGPYTIAHYDKQGRGFAFVQSTATAHDLFIARPITSKGRPLERSVLIHFLTWGEFISVVLEDDFEYTVAREPLQEALAVYDPEDEYVVLLKLRCGFLAVMRVPLVPDARACRKLAEDYQWADRTSVKLE 380 DRQ + ++L ++RL+L P+ + H + GRGF FVQ+ +L RP+ S GR L+RS+++HFL+ GEF+ VL+DDFE V R PL+ A+ YD + E VVL + RCG++AV+ VPLVP CR+L +Y+ D + L+ Sbjct: 154 DRQSVVARVLGRVRLYLCPFAVCHGEALGRGFVFVQTPNPVLELEYLRPVNSNGRRLDRSIILHFLSMGEFVDAVLQDDFELGVIRSPLEAAVESYDTKAEMVVLFRARCGYMAVVVVPLVPGWAVCRQLGLEYKEKDALQLNLD 298
BLAST of NO07G03660 vs. NCBI_GenBank
Match: XP_002180420.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47828.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 117.1 bits (292), Expect = 1.200e-22 Identity = 60/148 (40.54%), Postives = 90/148 (60.81%), Query Frame = 0 Query: 235 DRQDIACKLLCKIRLHLGPYTIAHYDKQGRGFAFVQSTATAHDLFIARPITSKGRPLE-RSVLIHFLTWGEFISVVLEDDFEYTVAREPLQEALAVYDPEDEYVVLLKLRCGFLAVMRVPLVPDARACRKLAEDYQWADRTSVKLELD 382 D+Q +L +IR ++ PY + GRGF F+QS T + + P S GRP + R++LI++LT GEF + V +DFE R LQEA+ YD EDE V+L++ RCG +++ LVPD R C+KL DY +++ T+ L+L+ Sbjct: 88 DKQQACNELFGRIRFYVCPYAVHKATTLGRGFLFIQSDRTLATMSLTLPKDSYGRPTDNRALLIYYLTLGEFDAEVCREDFEMATVRTKLQEAVENYDEEDEIVILMRFRCGHVSLGTSALVPDHRVCKKLGIDY-YSESTAAALQLN 234
BLAST of NO07G03660 vs. NCBI_GenBank
Match: OEU16333.1 (hypothetical protein FRACYDRAFT_160780, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 117.1 bits (292), Expect = 1.200e-22 Identity = 58/147 (39.46%), Postives = 90/147 (61.22%), Query Frame = 0 Query: 236 RQDIACKLLCKIRLHLGPYTIAHYDKQGRGFAFVQSTATAHDLFIARPITSKGRPLERSVLIHFLTWGEFISVVLEDDFEYTVAREPLQEALAVYDPEDEYVVLLKLRCGFLAVMRVPLVPDARACRKLAEDYQWADRT-SVKLELD 382 +Q+I +L +IR ++ PY + + GRGF F+Q+ T DL + P G + RS+L+HFLT GEF S V ++DFE + R PL++A+ Y+ E E V+L + RCG +++ + LVPD C+KL +DY + +V+L LD Sbjct: 79 KQEIRNELFQRIRFYVCPYAVLRTSELGRGFLFLQTDKTLQDLSVYIPKDCTGHTVTRSILLHFLTLGEFDSEVCKEDFELAMMRTPLKDAIDSYETEKEVVILCRFRCGNMSLGKAILVPDYGICKKLGQDYYAENPAGAVQLNLD 225
BLAST of NO07G03660 vs. NCBI_GenBank
Match: XP_002286115.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED95756.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 102.4 bits (254), Expect = 3.100e-18 Identity = 56/165 (33.94%), Postives = 91/165 (55.15%), Query Frame = 0 Query: 219 AATRATASTFPLPLNFDRQDIACKLLCKIRLHLGPYTIAHYDKQGRGFAFVQSTATAHDLFIARPITSKGR--PLERSVLIHFLTWGEFISVVLEDDFEYTVAREPLQEALAVYDPEDEYVVLLKLRCGFLAVMRVPLVPDARACRKLAEDYQWADRTSVKLELD 382 AA + + + D+ +L +IR + PY++ GRGF F+QS ++ L + P S G+ P +RSVL+H+LT EF S V +DFE ++ L+ A+ Y+ E E VL++ RCG +AV PLVPD + C+ L ++Y + + S ++L+ Sbjct: 107 AAYKRVGEDMMIIFSDDKDSARQDILSRIRFYAFPYSVHKSSIVGRGFLFLQSDSSLAVLSLPAPTMSNGKKYPKQRSVLLHWLTMKEFSSEVCMEDFELASVQKELKSAVESYNEEVEVPVLMRFRCGHVAVGIAPLVPDIKLCKMLGKEYYGSGKGSGAVQLN 271
BLAST of NO07G03660 vs. NCBI_GenBank
Match: GBG26549.1 (SET and MYND domain-containing protein DDB_G0277331 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 99.8 bits (247), Expect = 2.000e-17 Identity = 45/130 (34.62%), Postives = 78/130 (60.00%), Query Frame = 0 Query: 243 LLCKIRLHLGPYTIAHYDKQGRGFAFVQSTATAHDLFIARPITSKGRPLERSVLIHFLTWGEFISVVLEDDFEYTVAREPLQEALAVYDPEDEYVVLLKLRCGFLAVMRVPLVPDARACRKLAEDYQWAD 373 +L +IR+++ P+ G+GF ++S +T P+ ++G+PL RSV + +LT GEF + EDDFE R L+EAL Y+ + + VV++ L+CGF A + +P+VP+ ++LA Y++ + Sbjct: 126 MLRRIRMYMCPFAAGFSLLHGKGFVLLRSNSTLQQWVYEFPMDAEGQPLRRSVQLQYLTLGEFDGLAFEDDFELAAVRPKLEEALEAYEVQTQVVVVIVLKCGFFACVTIPMVPEFAIGKQLAAMYKYVE 255
BLAST of NO07G03660 vs. NCBI_GenBank
Match: GAX17827.1 (hypothetical protein FisN_18Hh027 [Fistulifera solaris]) HSP 1 Score: 97.8 bits (242), Expect = 7.600e-17 Identity = 56/140 (40.00%), Postives = 82/140 (58.57%), Query Frame = 0 Query: 243 LLCKIRLHLGPYTIAHYDKQGRGFAFVQSTATAHDLFIARPITSKGRPLERSVLIHFLTWGEFISVVLEDDFEYTVAREPLQEALAVYDPEDEYVVLLKLRCGFLAVMRVPLVPDARACRKLAED-YQWADRTSVKLELD 382 +L +IRL+ PY + GRGF F+QST T +T GR RSVL+H+LT GE+ + V DDFE T R LQ+A+ YD + + VVL++ RCG +AV +PL + C +L ++ YQ +++L+LD Sbjct: 100 VLHQIRLYAMPYAVYQMQALGRGFLFIQSTQT------LAALTLPGR--NRSVLLHYLTLGEYDAEVCRDDFELTAVRTCLQKAVNDYDAQQQMVVLMRFRCGHVAVGIIPLSLEFAVCLQLGKEYYQNVTAGALELQLD 231
BLAST of NO07G03660 vs. NCBI_GenBank
Match: GAX20089.1 (hypothetical protein FisN_18Lh027 [Fistulifera solaris]) HSP 1 Score: 94.0 bits (232), Expect = 1.100e-15 Identity = 56/137 (40.88%), Postives = 81/137 (59.12%), Query Frame = 0 Query: 246 KIRLHLGPYTIAHYDKQGRGFAFVQSTATAHDLFIARPITSKGRPLERSVLIHFLTWGEFISVVLEDDFEYTVAREPLQEALAVYDPEDEYVVLLKLRCGFLAVMRVPLVPDARACRKLAED-YQWADRTSVKLELD 382 +IRL+ PY GRGF F+QST T +A +T GR RSVL+H+LT GE+ + V DDFE T R LQ+A+ YD + + VVL++ RCG +AV +PL + C +L ++ YQ +++L+LD Sbjct: 126 QIRLYAMPYAAHQMQTLGRGFLFLQSTQT----LVA--LTLPGR--NRSVLLHYLTLGEYDAEVCRDDFELTAVRTCLQKAVNDYDAQQQMVVLMRFRCGHVAVGVIPLSLEYAVCLQLGKEYYQNVTAGALELQLD 254 The following BLAST results are available for this feature:
BLAST of NO07G03660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 8
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G03660 ID=NO07G03660|Name=NO07G03660|organism=Nannochloropsis oceanica|type=gene|length=1146bpback to top protein sequence of NO07G03660.1 >NO07G03660.1-protein ID=NO07G03660.1-protein|Name=NO07G03660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=382bpback to top Synonyms
Publications
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