NO07G03580, NO07G03580 (gene) Nannochloropsis oceanica

Overview
NameNO07G03580
Unique NameNO07G03580
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4811
Alignment locationchr7:985022..989832 +

Link to JBrowse

Properties
Property NameValue
DescriptionAtp-binding cassette sub-family b member mitochondrial
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:985022..989832 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0042626ATPase activity, coupled to transmembrane movement of substances
GO:0016887ATPase activity
GO:0005524ATP binding
GO:0016787hydrolase activity
GO:0005215transporter activity
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR036640ABC1_TM_sf
IPR030260ABCB10-like
IPR011527ABC1_TM_dom
IPR003439ABC_transporter-like
IPR003593AAA+_ATPase
Homology
BLAST of NO07G03580 vs. NCBI_GenBank
Match: WP_071901822.1 (ABC transporter permease [Cystobacter ferrugineus] >OJH37489.1 ABC transporter permease [Cystobacter ferrugineus])

HSP 1 Score: 355.5 bits (911), Expect = 3.600e-94
Identity = 200/484 (41.32%), Postives = 301/484 (62.19%), Query Frame = 0
Query:  166 AMAMLGVGLVGTMATYASTAQLDIVGQRISMDLRKRLFSNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENVSLFLSAAVMATGSAGMLLYISPSLSVVTLSVVPAMVLGAAQYSKIVKKLSLALLNSLAVSTQQAAEKMGAIRIVRHFAAEDREKERYGNIIDMSLGLARKLAVSEGVYVAAIFAVSNFALLGVLFLGAGMVVEGGLTVGGLASYCLYATNLSTAMKEATDGVAGIIRAQGAAGRLYALLETRPKMEKGTTIPPADAIRGRIEFKDVTFAYPTRPHHDVLKGFNLKLDPRENLGVTGPSGCGKSSLALLLTRMYAPQQGRVFLDGFDISTLDPSWLRRTVVVITQEPLLFSGTVRENIAYGMPDASEADITKAAQLSNAHRFITHLPQQYDTQIGERALVLSGGQKQRLAIARAILLKPRVLIVDEGTTALDYSNQQDVLKQLLGECCGSTVILIGHSATALEGSSRLV 650
            A+AM+ + L   +A           G+R+   LR+ LF++++ Q++ FFD  K+GEL NRLS+D   +   +  N+S+ L  A  A G  G+L Y SP L+ + L++VPA+ +GA  Y + V+ LS    ++LAV+ + A E +  IR VR FAAE  E ERY +  + +  +AR+ A     ++A   +    A   VL+ G  MVV+G +TVG L S+ +Y+  ++ A+    D  A  +RA GAA R++ L++  P +        A A++GR+EF++V FAYPTR    VLKG +L L P E + + GPSG GKS+LA LL RMY PQ+GRV LDG ++STLD  WLR+ V  + QEP+LF+ ++ +NI YG  DA++A++  AA+ +NAH FI+  P+ Y T +GER + LSGGQKQR+AIARA+L  PR+L++DE T+ALD  ++  V + L     G T ++I H  + + G++R+V
Sbjct:   52 ALAMVVIFLFQGVAMALRFYLFTTAGERVVTRLRQNLFASLMSQEVGFFDERKTGELTNRLSSDTTVLQNAVSVNISMALRNAAQAFGGIGLLFYTSPVLTALMLAIVPAVAVGAVSYGRKVRGLSKESQDALAVANEVAEESLSGIRTVRSFAAERHEVERYQSATEHAYDVARRRAKQSSFFLAGASSAGYLASAVVLWYGGRMVVDGRMTVGNLTSFLIYSLMVAFALGALADLWADFMRASGAAERVFELIDRVPAIPASGGERLA-AVQGRVEFQEVRFAYPTRRDVPVLKGIHLALAPGEVVAIVGPSGAGKSTLAALLARMYDPQEGRVLLDGRELSTLDTEWLRQQVGTVAQEPMLFATSIADNIRYGRKDATDAEVEAAARTANAHEFISRFPEGYHTMVGERGVQLSGGQKQRIAIARAVLKDPRLLVLDEATSALDAESEHLVKEALERLMRGRTTLIIAHRLSTVMGANRVV 534          
BLAST of NO07G03580 vs. NCBI_GenBank
Match: AKQ68958.1 (Lipid A export ATP-binding/permease protein MsbA [Myxococcus hansupus])

HSP 1 Score: 355.1 bits (910), Expect = 4.700e-94
Identity = 205/506 (40.51%), Postives = 309/506 (61.07%), Query Frame = 0
Query:  155 NSVVMEGLRDNAMAMLGVGLVGTMATYASTAQLDIVGQRISMDLRKRLFSNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENVSLFLSAAVMATGSAGMLLYISPSLSVVTLSVVPAMVLGAAQYSKIVKKLSLALLNSLAVSTQQAAEKMGAIRIVRHFAAEDREKERYGNIIDMSLGLARKLAVSEGVYVAAIFAVSNFALLGVLFLGAGMVVEGGLTVGGLASYCLYATNLSTAMKEATDGVAGIIRAQGAAGRLYALLETRPKMEKGTTIPPADAIRGRIEFKDVTFAYPTRPHHDVLKGFNLKLDPRENLGVTGPSGCGKSSLALLLTRMYAPQQGRVFLDGFDISTLDPSWLRRTVVVITQEPLLFSGTVRENIAYGMPDASEADITKAAQLSNAHRFITHLPQQYDTQIGERALVLSGGQKQRLAIARAILLKPRVLIVDEGTTALDYSNQ---QDVLKQLLGECCGSTVILIGHSATALEGSSRLVSLNRDGGI 658
            N  V++GL   A+ ML V +V  +A        +  G+R+   LRK LF  +L Q++ FFD  ++GEL +RLS+D   +   +  NVS+FL  AV A G   +L Y S  L++V L+V+P + +GA  Y + V+ +S  + ++LA S + A E +  IR VR FAAE  E ERY   ++ S  LAR       V++ A       ++  VL+ G  +VV+G L+VG L S+ +Y   ++ +     +  A  +RA GAA R++ LL+ +P +  G        +RG +EF+ V F+YPTRP   VL+G +L+L P E + V GPSG GKS+LA LL+R Y PQ G V LDG  ++ L+P WLRR + ++ QEP LFS ++ +NI YG PDA++A + +AA+ +NAH +I   P+ Y TQ+GER + LSGGQKQR+AIARA+L  PR+LI+DE T+ALD  ++   +D L++L+    G T ++I H  + +  ++R++ L  DGG+
Sbjct:   50 NRQVVDGL---ALVMLAVFVVQGLAMALRAYLFNTAGERVVARLRKDLFRALLSQEVGFFDARRTGELTSRLSSDTTVLQNTVTANVSMFLRYAVTAVGGVALLFYTSFQLTLVMLTVIPPVAIGAVLYGRRVRAISRQVQDALAASGEVAEEDLSGIRTVRSFAAERHEVERYSVAVERSFTLARDRTFQSSVFLGAASIAGYGSIAAVLWYGGRLVVDGSLSVGALTSFLIYTMLVAFSFSGIAELWADFMRASGAAERVFELLDRQPAIRAGG--EQLTDLRGHVEFRGVHFSYPTRPDVPVLQGLDLELRPGEVVAVVGPSGAGKSTLASLLSRFYDPQGGEVLLDGHPLTALEPEWLRRNIGMVAQEPQLFSCSIADNIRYGRPDATDAQVEEAARAANAHAYIERFPEGYRTQVGERGVQLSGGQKQRVAIARAVLKDPRLLILDEATSALDAESEHLVKDALERLMQ---GRTTLIIAHRLSTVANANRVLVL--DGGV 545          
BLAST of NO07G03580 vs. NCBI_GenBank
Match: EPX60558.1 (Lipid A export ATP-binding/permease protein MsbA [Cystobacter fuscus DSM 2262])

HSP 1 Score: 355.1 bits (910), Expect = 4.700e-94
Identity = 202/491 (41.14%), Postives = 304/491 (61.91%), Query Frame = 0
Query:  166 AMAMLGVGLVGTMATYASTAQLDIVGQRISMDLRKRLFSNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENVSLFLSAAVMATGSAGMLLYISPSLSVVTLSVVPAMVLGAAQYSKIVKKLSLALLNSLAVSTQQAAEKMGAIRIVRHFAAEDREKERYGNIIDMSLGLARKLAVSEGVYVAAIFAVSNFALLGVLFLGAGMVVEGGLTVGGLASYCLYATNLSTAMKEATDGVAGIIRAQGAAGRLYALLETRPKMEKGTTIPPADAIRGRIEFKDVTFAYPTRPHHDVLKGFNLKLDPRENLGVTGPSGCGKSSLALLLTRMYAPQQGRVFLDGFDISTLDPSWLRRTVVVITQEPLLFSGTVRENIAYGMPDASEADITKAAQLSNAHRFITHLPQQYDTQIGERALVLSGGQKQRLAIARAILLKPRVLIVDEGTTALDYSNQQDVLKQLLGECCGSTVILIGHSATALEGSSRLVSLNRDGG 657
            A+AM+ V L   +A           G+R+   LR+ LF++++ Q++ FFD  K+GEL NRLS+D   +   +  N+S+ L  A  A G  G+L Y SP L+ + L++VPA+ +GA  Y + V+ LS    ++LAV+ + A E +  IR VR FAAE  E ERY +  + +  +AR+ A     ++A   +    +   VL+ G  MV++G +TVG L S+ +Y+  ++ A+    D  A  +RA GAA R++ L++  P +        A A++GR+EF+DV FAYPTR    VLKG +L L P E + + GPSG GKS+LA LL RMY PQ+GRV LDG ++STLD  WLR+ V  + QEP+LF+ ++ +NI YG  DA++A++  AA+ +NAH FI+  P+ Y T +GER + LSGGQKQR+AIARA+L  PR+L++DE T+ALD  ++  V + L     G T ++I H  + + G+ R+V +  +GG
Sbjct:   76 ALAMVVVFLFQGVAMALRYYLFTTAGERVVTRLRQNLFASLMSQEVGFFDERKTGELTNRLSSDTTVLQNAVSVNISMALRNAAQAFGGIGLLFYTSPVLTALMLTIVPAVAVGAVSYGRKVRGLSKESQDALAVANEVAEESLSGIRTVRSFAAERHEVERYQSATEHAYDVARRRAKQSSFFLAGASSAGYLSSAVVLWYGGRMVLDGRMTVGNLTSFLIYSLMVAFALGALADLWADFMRASGAAERVFELIDRVPAIPSSGGERLA-AVQGRVEFQDVRFAYPTRRDVPVLKGIHLALAPGEVVAIVGPSGAGKSTLAALLARMYDPQEGRVLLDGRELSTLDTEWLRQQVGTVAQEPMLFATSIADNIRYGRKDATDAEVEAAARTANAHEFISRFPEGYQTMVGERGVQLSGGQKQRIAIARAVLKDPRLLVLDEATSALDAESEHLVKEALERLMRGRTTLIIAHRLSTVMGADRVVVM--EGG 563          
BLAST of NO07G03580 vs. NCBI_GenBank
Match: WP_044889315.1 (ABC transporter permease [Myxococcus hansupus])

HSP 1 Score: 355.1 bits (910), Expect = 4.700e-94
Identity = 205/506 (40.51%), Postives = 309/506 (61.07%), Query Frame = 0
Query:  155 NSVVMEGLRDNAMAMLGVGLVGTMATYASTAQLDIVGQRISMDLRKRLFSNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENVSLFLSAAVMATGSAGMLLYISPSLSVVTLSVVPAMVLGAAQYSKIVKKLSLALLNSLAVSTQQAAEKMGAIRIVRHFAAEDREKERYGNIIDMSLGLARKLAVSEGVYVAAIFAVSNFALLGVLFLGAGMVVEGGLTVGGLASYCLYATNLSTAMKEATDGVAGIIRAQGAAGRLYALLETRPKMEKGTTIPPADAIRGRIEFKDVTFAYPTRPHHDVLKGFNLKLDPRENLGVTGPSGCGKSSLALLLTRMYAPQQGRVFLDGFDISTLDPSWLRRTVVVITQEPLLFSGTVRENIAYGMPDASEADITKAAQLSNAHRFITHLPQQYDTQIGERALVLSGGQKQRLAIARAILLKPRVLIVDEGTTALDYSNQ---QDVLKQLLGECCGSTVILIGHSATALEGSSRLVSLNRDGGI 658
            N  V++GL   A+ ML V +V  +A        +  G+R+   LRK LF  +L Q++ FFD  ++GEL +RLS+D   +   +  NVS+FL  AV A G   +L Y S  L++V L+V+P + +GA  Y + V+ +S  + ++LA S + A E +  IR VR FAAE  E ERY   ++ S  LAR       V++ A       ++  VL+ G  +VV+G L+VG L S+ +Y   ++ +     +  A  +RA GAA R++ LL+ +P +  G        +RG +EF+ V F+YPTRP   VL+G +L+L P E + V GPSG GKS+LA LL+R Y PQ G V LDG  ++ L+P WLRR + ++ QEP LFS ++ +NI YG PDA++A + +AA+ +NAH +I   P+ Y TQ+GER + LSGGQKQR+AIARA+L  PR+LI+DE T+ALD  ++   +D L++L+    G T ++I H  + +  ++R++ L  DGG+
Sbjct:   65 NRQVVDGL---ALVMLAVFVVQGLAMALRAYLFNTAGERVVARLRKDLFRALLSQEVGFFDARRTGELTSRLSSDTTVLQNTVTANVSMFLRYAVTAVGGVALLFYTSFQLTLVMLTVIPPVAIGAVLYGRRVRAISRQVQDALAASGEVAEEDLSGIRTVRSFAAERHEVERYSVAVERSFTLARDRTFQSSVFLGAASIAGYGSIAAVLWYGGRLVVDGSLSVGALTSFLIYTMLVAFSFSGIAELWADFMRASGAAERVFELLDRQPAIRAGG--EQLTDLRGHVEFRGVHFSYPTRPDVPVLQGLDLELRPGEVVAVVGPSGAGKSTLASLLSRFYDPQGGEVLLDGHPLTALEPEWLRRNIGMVAQEPQLFSCSIADNIRYGRPDATDAQVEEAARAANAHAYIERFPEGYRTQVGERGVQLSGGQKQRVAIARAVLKDPRLLILDEATSALDAESEHLVKDALERLMQ---GRTTLIIAHRLSTVANANRVLVL--DGGV 560          
BLAST of NO07G03580 vs. NCBI_GenBank
Match: WP_051256496.1 (ABC transporter permease [Cystobacter fuscus])

HSP 1 Score: 355.1 bits (910), Expect = 4.700e-94
Identity = 202/491 (41.14%), Postives = 304/491 (61.91%), Query Frame = 0
Query:  166 AMAMLGVGLVGTMATYASTAQLDIVGQRISMDLRKRLFSNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENVSLFLSAAVMATGSAGMLLYISPSLSVVTLSVVPAMVLGAAQYSKIVKKLSLALLNSLAVSTQQAAEKMGAIRIVRHFAAEDREKERYGNIIDMSLGLARKLAVSEGVYVAAIFAVSNFALLGVLFLGAGMVVEGGLTVGGLASYCLYATNLSTAMKEATDGVAGIIRAQGAAGRLYALLETRPKMEKGTTIPPADAIRGRIEFKDVTFAYPTRPHHDVLKGFNLKLDPRENLGVTGPSGCGKSSLALLLTRMYAPQQGRVFLDGFDISTLDPSWLRRTVVVITQEPLLFSGTVRENIAYGMPDASEADITKAAQLSNAHRFITHLPQQYDTQIGERALVLSGGQKQRLAIARAILLKPRVLIVDEGTTALDYSNQQDVLKQLLGECCGSTVILIGHSATALEGSSRLVSLNRDGG 657
            A+AM+ V L   +A           G+R+   LR+ LF++++ Q++ FFD  K+GEL NRLS+D   +   +  N+S+ L  A  A G  G+L Y SP L+ + L++VPA+ +GA  Y + V+ LS    ++LAV+ + A E +  IR VR FAAE  E ERY +  + +  +AR+ A     ++A   +    +   VL+ G  MV++G +TVG L S+ +Y+  ++ A+    D  A  +RA GAA R++ L++  P +        A A++GR+EF+DV FAYPTR    VLKG +L L P E + + GPSG GKS+LA LL RMY PQ+GRV LDG ++STLD  WLR+ V  + QEP+LF+ ++ +NI YG  DA++A++  AA+ +NAH FI+  P+ Y T +GER + LSGGQKQR+AIARA+L  PR+L++DE T+ALD  ++  V + L     G T ++I H  + + G+ R+V +  +GG
Sbjct:   52 ALAMVVVFLFQGVAMALRYYLFTTAGERVVTRLRQNLFASLMSQEVGFFDERKTGELTNRLSSDTTVLQNAVSVNISMALRNAAQAFGGIGLLFYTSPVLTALMLTIVPAVAVGAVSYGRKVRGLSKESQDALAVANEVAEESLSGIRTVRSFAAERHEVERYQSATEHAYDVARRRAKQSSFFLAGASSAGYLSSAVVLWYGGRMVLDGRMTVGNLTSFLIYSLMVAFALGALADLWADFMRASGAAERVFELIDRVPAIPSSGGERLA-AVQGRVEFQDVRFAYPTRRDVPVLKGIHLALAPGEVVAIVGPSGAGKSTLAALLARMYDPQEGRVLLDGRELSTLDTEWLRQQVGTVAQEPMLFATSIADNIRYGRKDATDAEVEAAARTANAHEFISRFPEGYQTMVGERGVQLSGGQKQRIAIARAVLKDPRLLVLDEATSALDAESEHLVKEALERLMRGRTTLIIAHRLSTVMGADRVVVM--EGG 539          
BLAST of NO07G03580 vs. NCBI_GenBank
Match: XP_014152128.1 (hypothetical protein SARC_09338 [Sphaeroforma arctica JP610] >KNC78226.1 hypothetical protein SARC_09338 [Sphaeroforma arctica JP610])

HSP 1 Score: 354.0 bits (907), Expect = 1.000e-93
Identity = 217/569 (38.14%), Postives = 321/569 (56.41%), Query Frame = 0
Query:   92 VSLQEMGQLLLQEKKTFGAALTGIGLASACQMCVPYIFGRVVDLLSASVGIGVSTAGASELVSNSVVMEGLRDNAMAMLGVGLVGTMATYASTAQLDIVGQRISMDLRKRLFSNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENVSLFLSAAVMATGSAGMLLYISPSLSVVTLSVVPAMVLGAAQYSKIVKKLSLALLNSLAVSTQQAAEKMGAIRIVRHFAAEDREKERYGNIIDMSLGLARKLAVSEGVYVAAIFAVSNFALLGVLFLGAGMVVEGGLTVGGLASYCLYATNLSTAMKEATDGVAGIIRAQGAAGRLYALLETR--------PKMEKGTTIPPADAIRGRIEFKDVTFAYPTRPHHDVLKGFNLKLDPRENLGVTGPSGCGKSSLALLLTRMYAPQQGRVFLDGFDISTLDPSWLRRTVVVITQEPLLFSGTVRENIAYGMPDASEADITKAAQLSNAHRFITHLPQQYDTQIGERALVLSGGQKQRLAIARAILLKPRVLIVDEGTTALDYSNQQDVLKQLLGECCGSTVILIGHSATALEGSSRLVSLN 653
            VS++ + +LL  E      A+  + ++S   +  P   G+VVD +SA+   G S   A +++             +AMLGV  VG+ A     +QL+IV ++++  LRK +F  ++ Q L FF+ N++G L NRLSTD   VA  L +NV+  + A      S G LL ISP L+ VTL V+P   + A  Y +  KKL+  LL   A   Q + E++  IR V  F AE  E ERY   +D S GLA+ +  +EG ++A  FAV+   LLGVL+ G  ++V+  L+VG L S+C+Y   L  ++ + +  ++  ++AQGAA R++++++T          K  +G  +P        IE K+V FAYPTRP   VLK  +L L     L + G SG GKS+L LLL + Y   +G V + G++ S L   +LR  +  +TQ PLLFSGTV+ENI YG PDA++  I +AA+ +NAH FI  LP  YDTQ GER   LSGGQ QR+ IARA++    + I+DE T+ALD  ++Q V++ L     G T I+  H    L+ +  +  ++
Sbjct:  116 VSMRTLFELLRPETNRMAVAMGAVLVSSLASLAFPSAVGQVVDSVSATNPDGPSFETAQQII-------------LAMLGVVGVGSTAVAVRVSQLNIVSEQVARTLRKNVFECMVYQKLRFFEENETGRLVNRLSTDTSMVASTLTDNVARCIKAGTAVFTSTGFLLSISPQLTGVTLLVLPVFGVAAYTYGEYRKKLAQILLTRYAKENQVSMERLQGIRTVHSFTAEPAEVERYKRAVDRSFGLAKTVGYAEGAFLAGGFAVAQCTLLGVLYYGGSLMVQDALSVGQLTSFCMYTGYLFVSVGQVSVAMSEFLKAQGAARRVFSVIDTSNLNRHIYPMKDPEGAIMPDMTNFSPDIELKNVNFAYPTRPDIQVLKNVSLSLQAGHTLAICGGSGSGKSTLGLLLGQYYDVDEGSVTIGGYEASKLPLGFLRTNIAEVTQMPLLFSGTVKENIKYGNPDATDEQIYEAAKTANAHGFIQKLPNGYDTQCGERGKALSGGQMQRVCIARAVIKDSPIYIMDEATSALDAESEQLVVEALQKVMKGRTAIVFTHHLNVLKAADMVAVMD 671          
BLAST of NO07G03580 vs. NCBI_GenBank
Match: KFA86964.1 (ABC transporter permease [Archangium violaceum Cb vi76])

HSP 1 Score: 352.8 bits (904), Expect = 2.300e-93
Identity = 195/466 (41.85%), Postives = 296/466 (63.52%), Query Frame = 0
Query:  191 GQRISMDLRKRLFSNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENVSLFLSAAVMATGSAGMLLYISPSLSVVTLSVVPAMVLGAAQYSKIVKKLSLALLNSLAVSTQQAAEKMGAIRIVRHFAAEDREKERYGNIIDMSLGLARKLAVSEGVYVAAIFAVSNFALLGVLFLGAGMVVEGGLTVGGLASYCLYATNLSTAMKEATDGVAGIIRAQGAAGRLYALLETRPKMEKGTTIPPADAIRGRIEFKDVTFAYPTRPHHDVLKGFNLKLDPRENLGVTGPSGCGKSSLALLLTRMYAPQQGRVFLDGFDISTLDPSWLRRTVVVITQEPLLFSGTVRENIAYGMPDASEADITKAAQLSNAHRFITHLPQQYDTQIGERALVLSGGQKQRLAIARAILLKPRVLIVDEGTTALDYSNQQDVLKQLLGECCGSTVILIGHSATALEGSSRLVSLNRDGG 657
            G+R+   LR+ LF++++ Q++ FFD  K+GEL NRL++D   +   +  N+S+ L  A  A G   +LLY SP L+ + L++VPA+ +GA  Y + V+ LS    ++LA + + A E +  IR VR FAAE  E ERY    + +  +AR+      +++AA  A S  A   VL+ G  +V++G +TVG L S+ +Y+  ++ A+   TD  A  +RA GAA R++ L++ +P +        A +++GR+EF+ V FAYPTRP   VL+G +LKLDP E + + GPSG GKS++A LL RMY PQ GR+ LDG  +S LDP WLR+ +  + QEP+LF+ ++ +NI YG  DA++ +I  AA+ +NAH FIT  P+ Y T +GER + LSGGQKQR+AIARA+L  PR+L++DE T+ALD  ++  V + L     G T ++I H  + + G+ R++ L  +GG
Sbjct:   83 GERVVTQLRQDLFASLMSQEVGFFDERKTGELTNRLASDTTVLQNAVSVNISMGLRNAAQAVGGIALLLYTSPVLTGLMLAIVPAVAVGAVTYGRRVRGLSKQTQDALATANEVAEEGLSGIRTVRSFAAERHEVERYRTATERAYDVARRRVGQSAIFMAAASAASYLASAVVLWYGGRLVLDGKMTVGNLTSFLIYSLMVAFALGALTDLWADFMRAVGAAERVFELVDRQPAIPSSGGERLA-SVQGRVEFQQVRFAYPTRPDVPVLQGIDLKLDPGEVVAIVGPSGAGKSTIAGLLARMYDPQGGRLQLDGHPLSALDPEWLRQQIGTVAQEPMLFASSIEDNIRYGRMDATQEEIEAAARAANAHEFITRFPEGYRTLVGERGVQLSGGQKQRIAIARAMLKNPRLLVLDEATSALDAESEHLVQEALDRLMKGRTTLIIAHRLSTVIGADRVLVL--EGG 545          
BLAST of NO07G03580 vs. NCBI_GenBank
Match: WP_043414028.1 (ABC transporter permease [Archangium violaceum])

HSP 1 Score: 352.8 bits (904), Expect = 2.300e-93
Identity = 195/466 (41.85%), Postives = 296/466 (63.52%), Query Frame = 0
Query:  191 GQRISMDLRKRLFSNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENVSLFLSAAVMATGSAGMLLYISPSLSVVTLSVVPAMVLGAAQYSKIVKKLSLALLNSLAVSTQQAAEKMGAIRIVRHFAAEDREKERYGNIIDMSLGLARKLAVSEGVYVAAIFAVSNFALLGVLFLGAGMVVEGGLTVGGLASYCLYATNLSTAMKEATDGVAGIIRAQGAAGRLYALLETRPKMEKGTTIPPADAIRGRIEFKDVTFAYPTRPHHDVLKGFNLKLDPRENLGVTGPSGCGKSSLALLLTRMYAPQQGRVFLDGFDISTLDPSWLRRTVVVITQEPLLFSGTVRENIAYGMPDASEADITKAAQLSNAHRFITHLPQQYDTQIGERALVLSGGQKQRLAIARAILLKPRVLIVDEGTTALDYSNQQDVLKQLLGECCGSTVILIGHSATALEGSSRLVSLNRDGG 657
            G+R+   LR+ LF++++ Q++ FFD  K+GEL NRL++D   +   +  N+S+ L  A  A G   +LLY SP L+ + L++VPA+ +GA  Y + V+ LS    ++LA + + A E +  IR VR FAAE  E ERY    + +  +AR+      +++AA  A S  A   VL+ G  +V++G +TVG L S+ +Y+  ++ A+   TD  A  +RA GAA R++ L++ +P +        A +++GR+EF+ V FAYPTRP   VL+G +LKLDP E + + GPSG GKS++A LL RMY PQ GR+ LDG  +S LDP WLR+ +  + QEP+LF+ ++ +NI YG  DA++ +I  AA+ +NAH FIT  P+ Y T +GER + LSGGQKQR+AIARA+L  PR+L++DE T+ALD  ++  V + L     G T ++I H  + + G+ R++ L  +GG
Sbjct:  101 GERVVTQLRQDLFASLMSQEVGFFDERKTGELTNRLASDTTVLQNAVSVNISMGLRNAAQAVGGIALLLYTSPVLTGLMLAIVPAVAVGAVTYGRRVRGLSKQTQDALATANEVAEEGLSGIRTVRSFAAERHEVERYRTATERAYDVARRRVGQSAIFMAAASAASYLASAVVLWYGGRLVLDGKMTVGNLTSFLIYSLMVAFALGALTDLWADFMRAVGAAERVFELVDRQPAIPSSGGERLA-SVQGRVEFQQVRFAYPTRPDVPVLQGIDLKLDPGEVVAIVGPSGAGKSTIAGLLARMYDPQGGRLQLDGHPLSALDPEWLRQQIGTVAQEPMLFASSIEDNIRYGRMDATQEEIEAAARAANAHEFITRFPEGYRTLVGERGVQLSGGQKQRIAIARAMLKNPRLLVLDEATSALDAESEHLVQEALDRLMKGRTTLIIAHRLSTVIGADRVLVL--EGG 563          
BLAST of NO07G03580 vs. NCBI_GenBank
Match: XP_015217994.1 (PREDICTED: ATP-binding cassette sub-family B member 10, mitochondrial [Lepisosteus oculatus])

HSP 1 Score: 352.1 bits (902), Expect = 4.000e-93
Identity = 217/585 (37.09%), Postives = 337/585 (57.61%), Query Frame = 0
Query:   86 PTIQRPVSLQEMGQLLLQ----EKKTFGAALTGIGLASACQMCVPYIFGRVVDLLSASVGIGVSTAGASELVSNSVVMEGLRDNAMAMLGVGLVGTMATYASTAQLDIVGQRISMDLRKRLFSNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENVSLFLSAAVMATGSAGMLLYISPSLSVVTLSVVPAMVLGAAQYSKIVKKLSLALLNSLAVSTQQAAEKMGAIRIVRHFAAEDREKERYGNIIDMSLGLARKLAVSEGVYVAAIFAVSNFALLGVLFLGAGMVVEGGLTVGGLASYCLYATNLSTAMKEATDGVAGIIRAQGAAGRLYALLETRPK--MEKGTTIPPADAIRGRIEFKDVTFAYPTRPHHDVLKGFNLKLDPRENLGVTGPSGCGKSSLALLLTRMYAPQQGRVFLDGFDISTLDPSWLRRTVVVITQEPLLFSGTVRENIAYGMPDASEA---DITKAAQLSNAHRFITHLPQQYDTQIGERALVLSGGQKQRLAIARAILLKPRVLIVDEGTTALDYSNQ---QDVLKQLLGECCGSTVILIGHSATALEGSSRLVSLNRDGGIE 659
            P  +R   L E G+ LLQ    E+    AA+  + ++S   M  P+  GRV+D + AS         A EL ++      L      + GV L G  A  A    +   GQ+I  +LR+ LFS+IL Q++ FFD  ++GEL NRLS D   +   + +N+S  L A   AT   GM+ ++SPSL+   L ++P +   A  Y + ++ LS    +SLA +TQ A E++G +R VR F  E  E ++Y   I+  L LARK AV    +  A     N  +L VL+ G  ++    +TVG L+S+ +YA  +  ++   +   + +++  GA  RL+ LL+ +P+  + +G  + P + ++G +EF+DVTF+YPTR    V +G +L +     + V GPSG GKS+L  LL R+Y P  G + +DG+DI  L+P  LR  +  ++QEP+LFSG++ ENIAYG PD S     DI +AAQ++NAH F+ H P+ YDT +GE+ ++LSGGQKQR+AIARA+L  P++L++DE T+ALD  N+   Q+ L +L+    G TV++I H  + ++ +  +  L++   +E
Sbjct:  138 PDEKRDRQLAEDGRRLLQLAYPERWRLAAAMGFLAVSSTVTMSAPFFLGRVIDTIYAS--------PAQELGAS------LTSLCAVLSGVFLCGAAANAARVYLMQTSGQQIVRNLRESLFSSILRQEVGFFDKTRTGELVNRLSADTALIGRAVTDNLSDGLRAVAQATAGVGMMFFVSPSLAAFVLMIIPPLAALAVVYGRYLRSLSQRTQDSLADATQLAEERIGNLRTVRAFGKEFVEVDKYVEKINYVLQLARKEAVVRAGFFGATGLSGNLIVLSVLYKGGLLMASEHMTVGELSSFLMYAFWVGVSISGLSSFYSELMKGFGAGVRLWELLDRKPEFPLNEGIALRP-EQLKGELEFRDVTFSYPTRQDAPVFRGLSLSVPAGSVMAVVGPSGSGKSTLVSLLLRLYDPDSGVIAVDGYDIRDLNPYCLRSNIGTVSQEPVLFSGSIAENIAYGAPDPSRVSAQDIHRAAQIANAHGFVQHFPRGYDTMVGEKGILLSGGQKQRIAIARAVLKNPKILLLDEATSALDAENEFLVQEALDRLMQ---GRTVLIIAHRLSTIQNADAVAVLDQRRVVE 704          
BLAST of NO07G03580 vs. NCBI_GenBank
Match: APR79288.1 (Lipid A export ATP-binding/permease protein MsbA [Minicystis rosea])

HSP 1 Score: 352.1 bits (902), Expect = 4.000e-93
Identity = 219/573 (38.22%), Postives = 327/573 (57.07%), Query Frame = 0
Query:   86 PTIQRPVSLQEMGQLLLQEKKTFGAALTGIGLASACQMCVPYIFGRVVDLLSASVGIGVSTAGASELVSNSVVMEGLRDNAMAMLGVGLVGTMATYASTAQLDIVGQRISMDLRKRLFSNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENVSLFLSAAVMATGSAGMLLYISPSLSVVTLSVVPAMVLGAAQYSKIVKKLSLALLNSLAVSTQQAAEKMGAIRIVRHFAAEDREKERYGNIIDMSLGLARKLAVSEGVYVAAIFAVSNFALLGVLFLGAGMVVEGGLTVGGLASYCLYATNLSTAMKEATDGVAGIIRAQGAAGRLYALLETRPK--MEKGTTIPPADAIRGRIEFKDVTFAYPTRPHHDVLKGFNLKLDPRENLGVTGPSGCGKSSLALLLTRMYAPQQGRVFLDGFDISTLDPSWLRRTVVVITQEPLLFSGTVRENIAYGMPDASEADITKAAQLSNAHRFITHLPQQYDTQIGERALVLSGGQKQRLAIARAILLKPRVLIVDEGTTALDYSNQQDVLKQLLGECCGSTVILIGHSATALEGSSRLVSLNRDGG 657
            P  +R VS   + +L   E  +       + L S   +  P   GR+VD  +A  G G               +E L   A+ ++ V LV  + +    A   I G+R+   LR  LF+ ILDQ++AFFD  K+GEL NRL++D   +   +  N+S+ L       G  G L Y SP L+++ L+VVP + LGA  Y + V+KLS  + ++LA +++ A E +  IR VR FAAE RE  RY + +  S GLAR   +    ++      S  A   VL+ G  +VV G L+ GGL S+ +Y   ++ A+   ++  A  ++A GAA R++ L++  P   +  G+ +   D   GR++F+ V FAYPTR    VL+G +L + P E + V GPSG GKS++A LLTR+Y P +G + LDG D+  L P+ LRR + V++QEP+LFS ++ +NI YG   AS+A++  AA+ +NAH FIT  P+ Y T +GER + LSGGQKQR+AIARA+L  PR+L++DE T+ALD  ++  V + L     G T ++I H  + + G+ R+V L  DGG
Sbjct:    7 PPKRRSVSFGRILELARPELSSLVLGTFFLALGSVAGLLFPQAIGRIVDAATAP-GRG---------------LEALDRIALWLVVVFLVQALTSGIRFALFTIAGERVVARLRADLFARILDQEIAFFDEKKTGELVNRLASDTTVLQNTVSVNISMALRFVASIVGGVGALFYTSPRLTLLMLTVVPPVALGAVAYGRRVRKLSREVQDALARASEVADETLAGIRTVRAFAAEPREAARYESAVMASFGLARARTIIASTFMGVAAFASGLATAAVLWYGGHLVVSGALSAGGLTSFLVYTLLVAFALAGLSELWADFMKANGAAERIFELMDRAPSIPVAGGSELAGVD---GRLDFESVVFAYPTRRDAKVLQGIDLAVRPGEVVAVVGPSGAGKSTIAALLTRLYDPDEGTIRLDGRDLRGLAPASLRRHIGVVSQEPILFSSSIADNIRYGRAGASDAEVEAAARAANAHDFITRFPEGYGTPVGERGVQLSGGQKQRVAIARAVLKDPRILVLDEATSALDAESEHLVKEALDRLMKGRTTLIIAHRLSTVAGADRVVVL--DGG 558          
The following BLAST results are available for this feature:
BLAST of NO07G03580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_071901822.13.600e-9441.32ABC transporter permease [Cystobacter ferrugineus]... [more]
AKQ68958.14.700e-9440.51Lipid A export ATP-binding/permease protein MsbA [... [more]
EPX60558.14.700e-9441.14Lipid A export ATP-binding/permease protein MsbA [... [more]
WP_044889315.14.700e-9440.51ABC transporter permease [Myxococcus hansupus][more]
WP_051256496.14.700e-9441.14ABC transporter permease [Cystobacter fuscus][more]
XP_014152128.11.000e-9338.14hypothetical protein SARC_09338 [Sphaeroforma arct... [more]
KFA86964.12.300e-9341.85ABC transporter permease [Archangium violaceum Cb ... [more]
WP_043414028.12.300e-9341.85ABC transporter permease [Archangium violaceum][more]
XP_015217994.14.000e-9337.09PREDICTED: ATP-binding cassette sub-family B membe... [more]
APR79288.14.000e-9338.22Lipid A export ATP-binding/permease protein MsbA [... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL100nonsL100Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000493NSK000493Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G03580.1NO07G03580.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|525146gene_2696Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100079g4gene3536Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G03580.1NO07G03580.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G03580 ID=NO07G03580|Name=NO07G03580|organism=Nannochloropsis oceanica|type=gene|length=4811bp
CTTCACGTTTCTTTTCTACGGATTCTCGTTCGAATCATCGATTCGCTCCA
CGTTTCTTTTCCTCAGTTTTGCCTTTAAAATTATTTCTTCATTTGAAAGT
TCTTATGCGCCTGCTATTGGCGCGATACCATTCTGTGCTTTAAGTCGCTG
CCCTTCCTAATGCTTCTTTTTCTATGCTTGTTTGGCTTCTGACTTATTTC
GTTCGGTCTCTTTATCCACTTTTTCCTATTTTGTCGTCTCGTCCGCCGTG
TCTTTGCCTTTTGGAGGCTGTATCACAGCTTTGGGGACAATGCAACAATC
CGAGAGATGTGTAATGGAGGGATGAACGGAGGATTTGTTGCAGCGGTTGC
TGTCGGTGTACCACCACCCAAGTTCTGTCAAGTATTCGACTTTTTCTTCG
TTGTTTGTCGCCCATTTCATGTGATATAGATAAAGGGTATCTTTCCGCTT
GCCTGTCACCATTTCTGCCATAAGACCTTTGAGTTGATGGTAGGCCTTGC
CCGTCGGAAGGGCATCAAACGGCCAATTTTTTAATGGACAGACTGTTTCG
CAAATAATGGTCTTCCAAGAAATACGAGATCATCGCCCTGTGAATTCCCC
AACTCAATACCCTGTCAAGCGAAAACAACATCGCCTGCAGCAGAAGAGCG
TGTCGGCCCATTTGCTCGTACGAAGGAAAATCCCGAATTCCCAAAAAAAG
AAGCAAAACTAACACTTGTCGCTCCATCGTCCTGCATCAAAATATCGACC
CCTTTGTCCTCCTCCTTCTTAAAAAAGACATGGGTATCCTTGAACATCAC
CTTGTCCTCATCCTTCTTAAAAAAGACATGGGTATCCTTGAACATCACCA
AGTCCAAGTCTAGATACAACTATTCGTAAACAGAATCGATTGACCAACCA
TCCGGCCGCTGACTTCAGCCACATCATGTCTTTGTCGAGAGATAAATGGA
GAAGAGCTCAGCCATAACTCTGTCAACACGGAGGGTGGCGATCTGGGTGT
ATCCTGTTTGATATTGCACGGCCGGAAAGCGCGTGGCCAGTCCGTCTTCG
TGATGCTGCTGAAAATTGATGCTACTGGTGCAGATTGAGAAGCTGATGCG
GCAGCATTTGCGGCCTTCATCTTCAGTTCCTTAGCTTCTGTCCTGAGATT
CTTGATCTGAAGCGCCGCCGCCATCTCCTTCTTTTCGTCTCCTTCCTCTC
TCGCTTCTCCTTTTCCGGAAGCTTGTGCCAATTATCTCGCTTCCCGACCT
TTTTTTCCGGTCGACAAAGTACATGCCGAAAGTCACTCTCAACGTAAAGA
TGACGACCAAGATCATCAAATCAGAATATTCATCTTGGTAGTCCGCCCCC
TGGCCGAATGGGTGCGTATGTTAGGTGGTGGCTGGGGTGCATGGCTCAAG
TTTTGAATGCAGGGCGTGGAAGGTGAGGATGGGCCTTGCGTTCCTCGCAG
CGATACAGCAACGTCCTGGCGAGTACGTTTGCTCTCACTGCCGCTGCCCC
TTCATGCATGTCCCACGTCTGTGATCTTGTGCCTTGAGAAGGAGAGTATG
CTTGGGATGAGTACTTGGGATATGGAGCAAAGAGAGGCGATGTCATTTAC
GTCGGCAGTCGTTAATTTCTTCGATGATGTGTTGTTCAACAAGTTGTGTT
CCATGCTTAGTTTAATTTGTGCCCATATTTTTCTCGTCCTCACCCACGCT
CACGAAGCCTACGATGACCCAAAACTGAAATGGACAGTAGATAGACTTAA
GCGCAAGAAATGTTGCTTCTGCATCGGGGGTTTTGGATCGGGAGCCTTTC
ATTGGCTGTGGCACGAGGCACTATTATCAGGCCTCGGCATGCGTCGTCTT
TTGCCGTCCCATTACGCATGGCCGTCAAGATCACATTGCCTCCGGGCAAG
CAGCAGCAGCGGCATAAGCAGCAGCCATCACCAGCACCCGAATCACCCCT
TCTGCCTTCCCGACGGCCCTTTCGCGTGACCCCCACTACGACGCGCCTCG
ACGAGGTAGGGACACCCACGATTCAACGCCCTGTCTCCCTCCAAGAGATG
GGGCAGCTTTTGCTGCAGGAAAAAAAAACATTCGGGGCGGCCTTGACGGG
TATTGGGCTGGCTTCTGCCTGCCAAATGTGCGTCCCTTACATCTTCGGAA
GAGTAGTGGATTTGTTGTCGGCGTCGGTGGGTATCGGTGTGAGCACGGCC
GGCGCCAGTGAGCTAGTGAGCAATTCTGTTGTGATGGAGGGACTACGAGA
CAATGCAATGGCCATGCTTGGCGTGGGGTTGGTAGGGACGATGGCCACAT
ACGCGAGCACGGCTCAGTTGGACATAGTGGGACAGCGGATCTCGATGGAC
TTACGGAAGCGTTTGTTTAGCAACATTgtacgtaatagtggagggaggga
ggggagggaaggggggggaaaggacgaggcggatggagcaaggacaaatc
cgtctcttggcagaggtgtatctgtaatattcatgtcgatgcgtggagtt
tccatggagggacgggctgagagctgagaaagaaagcaagaaagtaacat
aagagaaggtggatcaacttccctcttccttttccaaaaactcatccaca
cctttcttccctttcctctctctctcctttcacttcctcccttcctctac
ttctgcagCTGGATCAAGACCTCGCCTTCTTCGACGTGAACAAATCGGGC
GAGCTGGCCAATCGCCTCTCGACTGACGTTCACGAGGTCGCGGAGCACCT
GGTAGAAAACGTTTCACTGTTCCTGTCGGCGGCCGTTATGGCCACAGGAA
GTGCCGGCATGCTATTGTATATCTCGCCTTCCCTGAGTGTTGTCACTCTT
TCCGTTGTTCCCGCCATGGTGTTGGGCGCGGCACAATATTCTAAAATCGT
CAAGAAATTGAGCCTTGCCCTGTTGAACAGCTTAGCAGTGAGCACCCAGC
AGGCGGCAGAAAAAATGGGTGCCATCCGAATTGTTCGTCACTTTGCTGCC
GAGGACCGGGAGAAAGAGAGATACGGGAATATCATTGATATGTCTCTGGG
GCTGGCGAGGAAACTTGCGGTCTCGGAGGGGGTGTATGTGGCGGCGATCT
TCGCAGTGTCGAATTTTGCGTTGCTGGGGGTGTTGTTTTTAGGGGCGGGA
ATGGTAGTGGAGGGGGGGCTGACGGTGGGGGGCTTGGCGAGTTATTGCTT
GTATGCGACTAATTTGAGTACAGgtgagtaggggagggagggttgtgatt
agagagtgtatgggggggtgggtgaataaatgaggcattcacagcagcac
gggcggccagtgcatgggcttgctcgacttaatcattcgatctctcaaga
ctcttgatttaagctttccaacgcccacgcatgtacacagCAATGAAGGA
GGCGACAGACGGCGTGGCGGGTATAATCAGGGCTCAAGGCGCTGCTGGAC
GTCTGTATGCGCTCTTGGAGACACGGCCGAAGATGGAGAAAGgtgaggaa
agaagggacggaaggcgggaggagaaggagcggtgagatacagtcatgac
ccagaatctgaatcttaaacggaaggattcaggagtcaatttcatctcat
tcgcattccttcccctgtttatctgctcaccccctttcccccaacactac
ccacaacgccaagGGACCACCATCCCTCCCGCGGACGCGATTCGAGGGAG
GATTGAGTTCAAGGACGTGACTTTCGCTTATCCAACCAGGCCGCATCATG
ATGTACTGAAGGGTTTTAACTTGAAGgtatctttttttgtgaggtgatga
ggccggggggcttaggaggggaagagcctgtgtgtagatgcatctgtctg
tttccgccttcctcccacttcagcattcgcgagtacttcattcgaacgca
gccttatctccctctttctttactttctccatccttcccttccttcctcc
gtccctccaagCTCGACCCCCGCGAGAACCTCGGAGTCACGGGTCCCAGT
GGCTGTGGGAAGAGCTCCCTCGCCCTCCTCCTGACCCGGATGTATGCCCC
CCAACAAGGCCGGGTTTTCCTGGACGGATTCGATATCTCCACGTTGGATC
CTTCGTGGTTGAGGAGGACGGTGGTGGTGATCACCCAGGAGgtgagggag
agaatgcggcgcaccgcaagtgagtcattttcatcgagtttcaccttttc
tccctccctccctccttcagCCCCTCCTCTTCTCAGGCACGGTCCGGGAG
AATATCGCCTACGGCATGCCCGATGCGTCCGAAGCGGACATTACCAAGGC
AGCACAACTTAGCAATGCCCATAGATTCATCACGCATTTGCCCCAGCAGT
ATGATACCCAGATCGGAGAGAGGGCGCTCGTTTTGTCGGGGGGGCAGAAG
CAAAGGTTGGCCATTGCGAGAGCTATATTGTTGAAGCCTCGGGTGCTTAT
CGTGGATGAAGgtatggcgagaaaggtggtaaaaaagggagagagaagag
gggaggacaccatgcacaacacaataacatctgaaggggggaaatcaata
ttattaaagtccttcactcttttttatttctatcgctactcagGAACGAC
AGCGTTGGATTATTCTAACCAACAAGACGTACTCAAACAGCTTCTGGGGG
AATGCTGCGGGAGCACGGTTATTTTGATCGGCCATTCAGCCACTGCCTTG
GAGGGCTCCTCTCGGCTGGTGAGCCTGAACAGGGACGGGGGGATAGAGAG
AGATGAGATGGTGGGGGATGCTGAGTTGCCGCATGTTGACAGTGACAGAT
ATTAGGGAGAA
back to top

protein sequence of NO07G03580.1

>NO07G03580.1-protein ID=NO07G03580.1-protein|Name=NO07G03580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=677bp
MLLLHRGFWIGSLSLAVARGTIIRPRHASSFAVPLRMAVKITLPPGKQQQ
RHKQQPSPAPESPLLPSRRPFRVTPTTTRLDEVGTPTIQRPVSLQEMGQL
LLQEKKTFGAALTGIGLASACQMCVPYIFGRVVDLLSASVGIGVSTAGAS
ELVSNSVVMEGLRDNAMAMLGVGLVGTMATYASTAQLDIVGQRISMDLRK
RLFSNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENVSLFLSAAVM
ATGSAGMLLYISPSLSVVTLSVVPAMVLGAAQYSKIVKKLSLALLNSLAV
STQQAAEKMGAIRIVRHFAAEDREKERYGNIIDMSLGLARKLAVSEGVYV
AAIFAVSNFALLGVLFLGAGMVVEGGLTVGGLASYCLYATNLSTAMKEAT
DGVAGIIRAQGAAGRLYALLETRPKMEKGTTIPPADAIRGRIEFKDVTFA
YPTRPHHDVLKGFNLKLDPRENLGVTGPSGCGKSSLALLLTRMYAPQQGR
VFLDGFDISTLDPSWLRRTVVVITQEPLLFSGTVRENIAYGMPDASEADI
TKAAQLSNAHRFITHLPQQYDTQIGERALVLSGGQKQRLAIARAILLKPR
VLIVDEGTTALDYSNQQDVLKQLLGECCGSTVILIGHSATALEGSSRLVS
LNRDGGIERDEMVGDAELPHVDSDRY*
back to top
Synonyms
Publications