NO07G03550, NO07G03550 (gene) Nannochloropsis oceanica

Overview
NameNO07G03550
Unique NameNO07G03550
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1543
Alignment locationchr7:974127..975669 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:974127..975669 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO07G03550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL100nonsL100Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000496NSK000496Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G03550.1NO07G03550.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|637572gene_2692Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G03550.1NO07G03550.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G03550 ID=NO07G03550|Name=NO07G03550|organism=Nannochloropsis oceanica|type=gene|length=1543bp
ATGTATGCGCCTCGCAACCCCAAGGGGCGCGGTCGAAAGACGATGCTCCC
GTCCAAACTTTACAATAAGAATTTTGTCGCCCATATCAACCCCGCGACTG
CCACAACGAGCACTCCGTCCACTTCCTCCACCTTTTCACCCTTTCTTCCT
CAACAAATGCCCACGTCCCCCGCTCTAATCGACTCTTCATCGACGGGTTT
TAAAGATGCCCTCGCCCCAAGCGGTGGCCAAAAGCTTTCCACAACATTGA
TTCCCTATTTCACTGACGACGTGGACGGGAGCCCCCGAAACGTGACGCGG
CAAGGCCTCACTCTCCGGCAGCTCTACCAGCTCAAGAAGGACGCCGATGC
ATGGCACCTCGTGGAATGTAAGCGCCGTCAAGATCAAGCAGCTTCTGATA
TGGCTGCCCGGATGAAGCAACAGGCCGAGAGGCAAGCCTTGTCCAGATGC
TACAGCCAACAGGCGCACGAGCGGCAAGTCCAAGAAGAGGTCAGCAAGGC
CGAATCTCGGGTCTGGGCACGGCAGTTGAAGCAACAGGCTGCAGAAGAGC
GGGCGGCTGAGATGGCGGCACGGACAGCGCACGTGGCGCAAATGGCTGCC
TATCGAAGCGAATTTTGCGAGGACATGGAACGCTCAAGGCTCACAAAAAT
GCAGCAACGTCAAAAGAAAATCGCGTGCGAGCAAGGGGAGATAGAGACAG
CGCGGCGCCTGGCGATGAAAGAAGCTCAAGCGATGCAATGCAAGAGGGAG
GCAAATTTGGAGCGAATGAAAAGAATTCAGTTGGAAGAGCAGCAGCAGAT
GCAGGATCGCGCCCGTCGCAAGAATGAGGAAGCGGAGGAGATCAAGAAGT
TGGAAAGGGAATGGGTGGCGGCGCAGGATCAGAAAGACCAAGACCGGCAT
GCGGCGTTTCAGAAGATTTTGACACAGCAGGAAGCCAAAGAAGCGAAGTT
TAGCATGACGACACAAGAGGCCCTGAAGAGGCAGTTAGAGGAAGATGAAC
ACCGTGCGAGCAAGTACCGTGAGCAAGCCGAAATGGTGCGAGAGGCAGCA
GATAATCGGCGTGACACCGTGTCTCGGACGGCTGCTCGGGCCCAATTGGA
GGCATTGGACCTCGAGATTCGGTTGCAGGCTGAGCGGAAGCGACAGCTCA
AGGCCGACGAGCAGGTCATTGCGCAAGAAATGCTTTCGCGGGACAAAGCG
GCCTATGAGAAGGACTTAGAGATGCAGCGTGCGGCGCGCTTGGCGGTTCA
GAAGCACAAGCGATTACTCGCGGTACAGATACAGGAGCAACAGCAACAGA
ACCAACGCATAATCGTCGGCTTTGTTCAGCCCTCGGAGATGGCCCTGAAC
AAAAGTCTATTCCAGGAGATCGGCTACGTCTCGCCCGATCCCAAGGCACC
TCCCCTGCAATACTTACAGGCATCGGTCACAGATGTTAATAAGGGAGTGC
TTGGCGCATGAAGAGGCGTGGTGAGAATGTCTATCATTATATGCAGGTGT
GTACGTGCATGGAACATAATGGTGCTAGGAGGCTAAAGGGAAG
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protein sequence of NO07G03550.1

>NO07G03550.1-protein ID=NO07G03550.1-protein|Name=NO07G03550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=487bp
MYAPRNPKGRGRKTMLPSKLYNKNFVAHINPATATTSTPSTSSTFSPFLP
QQMPTSPALIDSSSTGFKDALAPSGGQKLSTTLIPYFTDDVDGSPRNVTR
QGLTLRQLYQLKKDADAWHLVECKRRQDQAASDMAARMKQQAERQALSRC
YSQQAHERQVQEEVSKAESRVWARQLKQQAAEERAAEMAARTAHVAQMAA
YRSEFCEDMERSRLTKMQQRQKKIACEQGEIETARRLAMKEAQAMQCKRE
ANLERMKRIQLEEQQQMQDRARRKNEEAEEIKKLEREWVAAQDQKDQDRH
AAFQKILTQQEAKEAKFSMTTQEALKRQLEEDEHRASKYREQAEMVREAA
DNRRDTVSRTAARAQLEALDLEIRLQAERKRQLKADEQVIAQEMLSRDKA
AYEKDLEMQRAARLAVQKHKRLLAVQIQEQQQQNQRIIVGFVQPSEMALN
KSLFQEIGYVSPDPKAPPLQYLQASVTDVNKGVLGA*
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Synonyms
Publications