NO07G03540, NO07G03540 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G03540 vs. NCBI_GenBank
Match: XP_009525582.1 (hypothetical protein PHYSODRAFT_559076 [Phytophthora sojae] >EGZ16524.1 hypothetical protein PHYSODRAFT_559076 [Phytophthora sojae]) HSP 1 Score: 242.7 bits (618), Expect = 1.400e-60 Identity = 125/274 (45.62%), Postives = 169/274 (61.68%), Query Frame = 0 Query: 3 SPLLR-----YALRLPGRLLKRPRAFTTATILKNDESSIISPAPAPPGSDLYDTHIPTTPFQKLFIAGYSAATALRDPERGDMVAALGETTGLVALQSLREIMAADAVGCELLEAKPDIKEESVHPDRLRKLPPGTFGHEYACFMDHHGYSADERTAVRFVDDPELAFVIQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPVAAFSGLFGPLSLPATERKVLREQYIPWAVRTAVAAKPLMCVWYERRFDEPLNAMRAQLNITPAPPL 272 +P+LR A R R+L R + ++ A P YD+H+PTTP QK+ ++ SA T +P+RGDM+AALGE TG AL+ + M AD +G +L KP I+ + + + LR LP +FG YA FMD HG+ AD R+ VRFVDDPELA+V+QR+R+ HDFWH L +PPTVLGE+ALK+ EM ++LPV+A S GPL L + ER +L + Y+PWA R + A L CV YE F+ P+ +R +LNI APPL Sbjct: 2 APMLRPRLASAAARAASRVLTRTAPSAPWAAASFADQALGPVAGEPQRRVQYDSHMPTTPLQKIVLSVTSALTVFANPDRGDMLAALGEVTGRDALRRIHARMCADPMGARILAEKPVIRNDKIDMEYLRALPADSFGRHYATFMDSHGFDADGRSLVRFVDDPELAYVMQRHRESHDFWHTLFDVPPTVLGEIALKYVEMAHSQLPVSALSAFVGPLRLSSEERCLLMKVYVPWASRASKKAHSLHCVMYEEEFETPIQELRRRLNIEVAPPL 275
BLAST of NO07G03540 vs. NCBI_GenBank
Match: XP_008609915.1 (hypothetical protein SDRG_05946 [Saprolegnia diclina VS20] >EQC36494.1 hypothetical protein SDRG_05946 [Saprolegnia diclina VS20]) HSP 1 Score: 241.5 bits (615), Expect = 3.100e-60 Identity = 122/232 (52.59%), Postives = 152/232 (65.52%), Query Frame = 0 Query: 38 SPAPAPPGSDLYDTHIPTTPFQKLFIAGYSAATALRDPERGDMVAALGETTGLVALQSLREIMAADAVGCELLEAKPDIKEESVHPDRLRKLPPGTFGHEYACFMDHHGYSADERTAVRFVDDPELAFVIQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPVAAFSGLFGPLSLPATERKVLREQYIPWAVRTAVAAKPLMCVWYERRFDEPLNAMRAQLNITPAP 270 S A P L+ H+PTTP QKL +A +A + +PERGDM+AALG+ TG VAL+ + M +D VG E+L KP I+ D LR LP TFG+ Y FMD HG+ AD R VRFVDDPELA+V+QRYR++HDFWHVL GLPPTV E+ALK+ E+VQT LPV A SG GPL L ERK L ++PWA R A L+ V+YER ++ L +R +LNI AP Sbjct: 22 SAAGLPTRHVLHAHHVPTTPTQKLLVAATAAVSVFANPERGDMLAALGDATGEVALRQMHLKMCSDPVGMEILAQKPRIRSAVTDIDALRSLPTDTFGYAYTQFMDAHGFEADGRAHVRFVDDPELAYVLQRYRELHDFWHVLFGLPPTVFSEIALKYVELVQTGLPVCALSGFVGPLRLSCGERKELLGTFVPWAYRAGREAPCLLNVYYEREYETKLEDLRRRLNIRVAP 253
BLAST of NO07G03540 vs. NCBI_GenBank
Match: XP_008874224.1 (hypothetical protein H310_09827 [Aphanomyces invadans] >ETV96978.1 hypothetical protein H310_09827 [Aphanomyces invadans]) HSP 1 Score: 240.4 bits (612), Expect = 6.900e-60 Identity = 123/239 (51.46%), Postives = 158/239 (66.11%), Query Frame = 0 Query: 34 SSIISPAPAPPGSDLYDTHIPTTPFQKLFIAGYSAATALRDPERGDMVAALGETTGLVALQSLREIMAADAVGCELLEAKPDIKEESVHPDRLRKLPPGTFGHEYACFMDHHGYSADERTAVRFVDDPELAFVIQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPVAAFSGLFGPLSLPATERKVLREQYIPWAVRTAVAAKPLMCVWYERRFDEPLNAMRAQLNITPAPPLV 273 +S+ S A P LY +H+PT+P QK+ +A SA + +PERGDM+AALG+ TG VA++++ M++D VG ++L KP + V D LR LP TFG+ Y FMD HG+ AD R V+FVDDPELA+V+QRYR++HDFWHVL GLPPTV E+ LK+ E+VQT LPV SGL GPL L + ER L YIPWA R A LM V+YE F PL+ +RA+L I PP V Sbjct: 26 ASVPSAAGDPTRHVLYKSHVPTSPVQKIVVAVGSAVAVMANPERGDMLAALGDVTGAVAIRNMHLKMSSDPVGMQILTEKPRFRSNVVDIDALRDLPHNTFGYAYTQFMDAHGFEADGRAEVKFVDDPELAYVMQRYRELHDFWHVLFGLPPTVFSEIILKYVELVQTGLPVCTLSGLVGPLRLTSRERCQLLCTYIPWAYRAGHQAPFLMNVYYEHEFHTPLDELRARLRIL-LPPAV 263
BLAST of NO07G03540 vs. NCBI_GenBank
Match: XP_012209441.1 (hypothetical protein SPRG_14929 [Saprolegnia parasitica CBS 223.65] >KDO19829.1 hypothetical protein SPRG_14929 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 239.6 bits (610), Expect = 1.200e-59 Identity = 122/237 (51.48%), Postives = 154/237 (64.98%), Query Frame = 0 Query: 34 SSIISPAPAPPGSD-LYDTHIPTTPFQKLFIAGYSAATALRDPERGDMVAALGETTGLVALQSLREIMAADAVGCELLEAKPDIKEESVHPDRLRKLPPGTFGHEYACFMDHHGYSADERTAVRFVDDPELAFVIQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPVAAFSGLFGPLSLPATERKVLREQYIPWAVRTAVAAKPLMCVWYERRFDEPLNAMRAQLNITPAP 270 SS+ A PP L+ H+PTTP QKL +A +A + +PERGDM+AALG+ TG VAL+ + M +D VG E+L KP I+ D LR LP +FG+ Y FMD HG+ AD R VRFVDD ELA+V+QRYR++HDFWHVL GLPPTV E+ALK+ E+VQT LPV A SG GPL L ERK L ++PWA R A L+ V+YER ++ L +R +LNI AP Sbjct: 16 SSLAPSAAGPPTRHVLHAHHVPTTPTQKLLVAATAAVSVFANPERGDMLAALGDATGEVALRQMHLKMCSDPVGMEILAQKPRIRSSVTDIDALRSLPTDSFGYAYTQFMDAHGFEADGRAHVRFVDDAELAYVLQRYRELHDFWHVLFGLPPTVFSEIALKYVELVQTGLPVCALSGFVGPLRLSCDERKELLGTFVPWAYRAGREAPCLLNVYYEREYETKLEDLRRRLNIRVAP 252
BLAST of NO07G03540 vs. NCBI_GenBank
Match: GAX92648.1 (ubiquinone biosynthesis protein COQ4 [Pythium insidiosum]) HSP 1 Score: 239.6 bits (610), Expect = 1.200e-59 Identity = 123/254 (48.43%), Postives = 159/254 (62.60%), Query Frame = 0 Query: 21 RAFTTATILKNDESSIISPAPAPPGSDLYDTHIPTTPFQKLFIAGYSAATALRDPERGDMVAALGETTGLVALQSLREIMAADAVGCELLEAKPDIKEESVHPDRLRKLPPGTFGHEYACFMDHHGYSADERTAVRFVDDPELAFVIQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPVAAFSGLFGPLSLPATERKVLREQYIPWAVRTAVAAKPLMCVWYERRFDEPLNAMRAQLNITPAPPLVRP 275 R TA S S A P LY TH PT+P QK+ ++ SA T L +PERGDM+A LGE TG AL + M +D VG +L +P I+ + + + LR LP +FG Y+ FMD HG+ AD R V +VDDPELA+++QRYR++HDFWH L GLPPTV GE+ALK+ E+VQT LPV A SG GPL L + ER L +YIPWA + A+ LM V+YE+ F+ PL +R +L I P PP + P Sbjct: 25 RXAPTAQFQDATSFSSASVAGEPARRVLYPTHTPTSPVQKIALSFVSAFTVLGNPERGDMLATLGEVTGRQALLRMHARMCSDPVGARILAERPSIRSDRIDIEYLRALPKDSFGFAYSQFMDAHGFEADGRAYVHYVDDPELAYIMQRYRELHDFWHTLYGLPPTVFGEIALKYVELVQTGLPVCALSGFVGPLRLTSQERHRLLTEYIPWAHQAGKQARFLMSVYYEKEFETPLAELRERLRILP-PPAIEP 277
BLAST of NO07G03540 vs. NCBI_GenBank
Match: XP_009036779.1 (hypothetical protein AURANDRAFT_26082 [Aureococcus anophagefferens] >EGB08798.1 hypothetical protein AURANDRAFT_26082 [Aureococcus anophagefferens]) HSP 1 Score: 236.5 bits (602), Expect = 1.000e-58 Identity = 125/266 (46.99%), Postives = 159/266 (59.77%), Query Frame = 0 Query: 5 LLRYALRLPGRLLKRPRAFTTATILKNDESSIISPAPAPPGSDLYDTHIPTTPFQKLFIAGYSAATALRDPERGDMVAALGETTGLVALQSLREIMAADAVGCELLEAKPDIKEESVHPDRLR-KLPPGTFGHEYACFMDHHGYSADERTAVRFVDDPELAFVIQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPVAAFSGLFGPLSLPATERKVLREQYIPWAVRTAVAAKPLMCVWYERRFDEPLNAMRAQLNITPAP 270 +L +A RL R RP + + + P + Y H+PT+P QK F AG SA A+ +PER DMV LGE TG VAL+ LR+ + A A G E+L +P + RLR PGTFG Y FM HG+ AD+R+ V VDD ELA+V+ RYRQVHD+WHVL GLPP++ GELALKWFE+V T LPVAAFS +FGP+ L +R LR+ IPWA+ AKPL+ V YE + L +RA L + PAP Sbjct: 1 MLLHARRLVAR---RPLRAALTRCSSSSQDAFDDHKPVGQRTSNYRGHLPTSPLQKAFAAGASALQAIANPERADMVGLLGEVTGRVALERLRDELRASAEGREVLALRPIVSTADADAARLRDACAPGTFGRAYGAFMGRHGFDADDRSPVTLVDDEELAYVLLRYRQVHDYWHVLFGLPPSIPGELALKWFELVHTGLPVAAFSAVFGPVHLSGGDRAFLRDAIIPWALDAGKRAKPLLAVHYEAHWHTDLAQLRADLRVVPAP 263
BLAST of NO07G03540 vs. NCBI_GenBank
Match: CBJ29272.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 236.1 bits (601), Expect = 1.300e-58 Identity = 129/293 (44.03%), Postives = 170/293 (58.02%), Query Frame = 0 Query: 9 ALRLPGRLLKRPRAF-------TTATILKNDESSIISPAPAPPGSD-LYDTHIPTTPFQKLFIAGYSAATALRDPERGDMVAALGETTGLVALQSLREIMAADAVGCELLEAKPDIKEESVHPDRLRKLPPGTFGHEYACFMDHHGYSADERTAVRFVDDPELAFVIQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPVAAFSGLFGPLSLPATE-----------------------RKVLREQYIPWAVRTA-VAAKPLMCVWYERRFDEPLNAMRAQLNITPAP 270 A RL RP F + TI D ++ + A P LY H PT+P Q+ +AG++ TAL DPER DMVA LGE TG +AL+ L M AD G E+L A+P I E +V L LP GT G Y+ FM + +S D R+ V++VDDP+LA+V++RYR+VHD WH L GLP TV GELALKWFE+VQT LPV A S + GPL+LP+ E R+VL ++PWA+R A +PL+CVWYE+R+++PL +R L + AP Sbjct: 43 ASRLSAAASPRPSPFQHGSRRPASTTIGSGDSTTANTTASGPAAKRVLYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDGTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMRRYREVHDLWHALTGLPATVEGELALKWFELVQTGLPVCALSAVLGPLALPSKEPPXXXXXXXXXXXXXXXXXXRGSREVLARTFVPWAIRAGRRARRPLVCVWYEKRWEQPLELVRRDLGVEMAP 335
BLAST of NO07G03540 vs. NCBI_GenBank
Match: XP_001367166.1 (PREDICTED: ubiquinone biosynthesis protein COQ4 homolog, mitochondrial [Monodelphis domestica]) HSP 1 Score: 229.9 bits (585), Expect = 9.300e-57 Identity = 110/222 (49.55%), Postives = 152/222 (68.47%), Query Frame = 0 Query: 48 LYDTHIPTTPFQKLFIAGYSAATALRDPERGDMVAALGETTGLVALQSLREIMAADAVGCELLEAKPDIKEESVHPDRLRKLPPGTFGHEYACFMDHHGYSADERTAVRFVDDPELAFVIQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPVAAFSGLFGPLSLPATERKVLREQYIPWAVRTAVAAKPLMCVWYERRFDEPLNAMRAQLNITPAP 270 LY HIPT+P QK+ +A +A AL DP R DMVA LGETTG ALQ+LR+ M D G ++L+ +P I+ +++ ++LR LP G+FG EY F+D + S D R RFVDD ELA+VIQRYR+VHD H L G+P T+LGE+ +KWFE +QT LP+ A FGPL L A + KVL IPWAV+ ++ ++ ++YE+R+++P+ A+R +L ITP P Sbjct: 40 LYPDHIPTSPLQKMLLAAGAACMALYDPYRHDMVAVLGETTGHQALQALRDRMRRDPEGAQILQERPRIQLSTLNLNKLRTLPEGSFGREYVHFLDVNRVSPDTRAPTRFVDDEELAYVIQRYREVHDLLHTLLGMPTTILGEIVVKWFEAIQTGLPMCALGAAFGPLRLSAKKLKVLVSDLIPWAVQNGQNSRCVLNLYYEQRWEQPIRALREELGITPPP 261
BLAST of NO07G03540 vs. NCBI_GenBank
Match: XP_019640965.1 (PREDICTED: ubiquinone biosynthesis protein COQ4 homolog, mitochondrial-like isoform X1 [Branchiostoma belcheri]) HSP 1 Score: 229.2 bits (583), Expect = 1.600e-56 Identity = 125/278 (44.96%), Postives = 167/278 (60.07%), Query Frame = 0 Query: 7 RYALRLPGRLLKRPRAFTTATILKNDESSIIS-----PAPAPPGSD----LYDTHIPTTPFQKLFIAGYSAATALRDPERGDMVAALGETTGLVALQSLREIMAADAVGCELLEAKPDIKEESVHPDRLRKLPPGTFGHEYACFMDHHGYSADERTAVRFVDDPELAFVIQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPVAAFSGLFGPLSLPATERKVLREQYIPWAVRTAVAAKPLMCVWYERRFDEPLNAMRAQLNITPAPPLVRPT 276 R+A+ + RPR +LK + S IS A +P + LY H+PT+ FQK + SAA A+ DP R DM+A LGETTG AL +R+ M AD VG +L +P I +V + LR LP GTFG EY ++D + + D R V+F+DD ELA+VIQRYR++HD +H L G+P +LGE +K FE VQT LP+ A +FGPL L + +R LR YIPWAVR +AK LM V+YE+RF EPL ++A L I P P + + T Sbjct: 12 RFAIFTSQNIRLRPRLI----LLKAEHYSRISHQEGVGASSPHAEEWTPPLYQEHVPTSLFQKALLTVGSAAVAITDPYRHDMIAVLGETTGYYALMRIRDQMKADPVGQLILSERPRINTRTVDLEELRNLPEGTFGREYVNWLDRNDVTPDSRAPVKFIDDEELAYVIQRYREIHDLFHTLLGMPTNMLGECTVKMFEAVQTGLPMCAMGAVFGPLRLSSRQRWKLRNYYIPWAVRAGYSAKCLMNVYYEKRFHEPLEELKADLKIPPPPQVPKST 285
BLAST of NO07G03540 vs. NCBI_GenBank
Match: XP_001514672.1 (PREDICTED: ubiquinone biosynthesis protein COQ4 homolog, mitochondrial, partial [Ornithorhynchus anatinus]) HSP 1 Score: 228.8 bits (582), Expect = 2.100e-56 Identity = 117/232 (50.43%), Postives = 155/232 (66.81%), Query Frame = 0 Query: 43 PPG--SDLYDTHIPTTPFQKLFIAGYSAATALRDPERGDMVAALGETTGLVALQSLREIMAADAVGCELLEAKPDIKEESVHPDRLRKLPPGTFGHEYACFMDHHGYSADERTAVRFVDDPELAFVIQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPVAAFSGLFGPLSLPATERKVLREQYIPWAVRTAVAAKPLMCVWYERRFDEPLNAMRAQLNITPAPPLV 273 PPG + LY HIPT+P QK+ +A SA AL DP R DMVA LGETTG ALQ+LR+ M D G +L+ +P I+ ++ +RLR LP GTFG EY F+D + S D R RFVDD ELA+VIQRYR+VHD H L G+P +LGE+ +KWFE VQ LP+ +FGP+ L A + + L IPWAVR+ A++ ++ ++YERR+D+PL A+R +L I P PPL+ Sbjct: 13 PPGVLAPLYPEHIPTSPLQKVLLAAGSAVMALYDPYRHDMVAVLGETTGRWALQALRQQMRKDPEGALILQERPRIQLSTLDLNRLRALPEGTFGREYVHFLDDNRVSPDTRAPTRFVDDEELAYVIQRYREVHDLLHTLLGMPTNMLGEVVVKWFEAVQLGLPMCILGAVFGPIRLNAQKLQALTGDLIPWAVRSGRASRCVLNLYYERRWDQPLEALREELRI-PQPPLL 243 The following BLAST results are available for this feature:
BLAST of NO07G03540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G03540 ID=NO07G03540|Name=NO07G03540|organism=Nannochloropsis oceanica|type=gene|length=834bpback to top protein sequence of NO07G03540.1 >NO07G03540.1-protein ID=NO07G03540.1-protein|Name=NO07G03540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=278bpback to top Synonyms
Publications
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