NO07G03540, NO07G03540 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G03540 vs. NCBI_GenBank
Match: EWM27019.1 (ubiquinone biosynthesis protein coq4 mitochondrial-like protein [Nannochloropsis gaditana]) HSP 1 Score: 377.1 bits (967), Expect = 4.700e-101 Identity = 188/257 (73.15%), Postives = 209/257 (81.32%), Query Frame = 0 Query: 15 RLLKRPRAFTTATILKNDESSIISPAPAPPGSDLYDTHIPTTPFQKLFIAGYSAATALRDPERGDMVAALGETTGLVALQSLREIMAADAVGCELLEAKPDIKEESVHPDRLRKLPPGTFGHEYACFMDHHGYSADERTAVRFVDDPELAFVIQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPVAAFSGLFGPLSLPATERKVLREQYIPWAVRTAVAAKPLMCVWYERRFDEPLNAMRAQLNITPAPPL 272 R KR R F+T T ++ SP PA P + LY +HIPT+ FQKL+IAG+SAATA RDPERGDMVAALGETTG ALQ LR M+AD VG ELL AKPDIKE+S PDRLR+LP GTFG EYA F+DHHGYS DER AVRFVDD ELAFV+QRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLP+AAFSG+ GPLSL A ERK+L+EQYIPWAVR AV A+PLMCVWYER F+EPL MR +L I APP+ Sbjct: 53 RTFKRMRPFST-TSSQSSGGKETSP-PAVPETPLYSSHIPTSGFQKLYIAGFSAATAFRDPERGDMVAALGETTGTRALQRLRRAMSADPVGRELLAAKPDIKEDSTRPDRLRRLPEGTFGREYARFLDHHGYSPDERAAVRFVDDAELAFVMQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPIAAFSGVVGPLSLSAQERKLLKEQYIPWAVRAAVKARPLMCVWYERSFEEPLELMRKRLQIVTAPPM 307
BLAST of NO07G03540 vs. NCBI_GenBank
Match: OQR88422.1 (ubiquinone biosynthesis protein COQ4 [Achlya hypogyna]) HSP 1 Score: 251.5 bits (641), Expect = 3.000e-63 Identity = 126/245 (51.43%), Postives = 162/245 (66.12%), Query Frame = 0 Query: 28 ILKNDESSIISPAPAPPGSD-LYDTHIPTTPFQKLFIAGYSAATALRDPERGDMVAALGETTGLVALQSLREIMAADAVGCELLEAKPDIKEESVHPDRLRKLPPGTFGHEYACFMDHHGYSADERTAVRFVDDPELAFVIQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPVAAFSGLFGPLSLPATERKVLREQYIPWAVRTAVAAKPLMCVWYERRFDEPLNAMRAQLNITPAPPL 272 +L S++ A PP L+ H+PTTP QK+ +A +A + + +PERGDM+AALG+ TG VAL+ + M +D G E+L KP I+ D LR LP +FG+ Y FMD HG+ AD R VRFVDDPELA+V+QRYR++HDFWHVL GLPPTV GELALK+ E+VQT LPVAA SG+ GPL L ERK L Y+PWA + A LM V+YER ++ L +RA+L I APP+ Sbjct: 11 VLARSASTVAPSAAGPPTQHLLHAHHVPTTPLQKILVAATAAVSVMANPERGDMLAALGDATGEVALRQMHLKMCSDPTGMEILAQKPRIRSTVTDVDALRSLPKDSFGYAYTQFMDAHGFEADGRAHVRFVDDPELAYVLQRYRELHDFWHVLFGLPPTVFGELALKYVELVQTGLPVAALSGIVGPLRLSCDERKELFTTYLPWAHQAGKQAPFLMNVYYEREYESNLEDLRARLRILVAPPV 255
BLAST of NO07G03540 vs. NCBI_GenBank
Match: XP_024586592.1 (ubiquinone biosynthesis protein coq4 [Plasmopara halstedii] >CEG50223.1 ubiquinone biosynthesis protein coq4 [Plasmopara halstedii]) HSP 1 Score: 250.8 bits (639), Expect = 5.100e-63 Identity = 123/238 (51.68%), Postives = 163/238 (68.49%), Query Frame = 0 Query: 33 ESSIISPAPAPPGSDLYDTHIPTTPFQKLFIAGYSAATALRDPERGDMVAALGETTGLVALQSLREIMAADAVGCELLEAKPDIKEESVHPDRLRKLPPGTFGHEYACFMDHHGYSADERTAVRFVDDPELAFVIQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPVAAFSGLFGPLSLPATERKVLREQYIPWAVRTAVAAKPLMCVWYERRFDEPLNAMRAQLNITPAPP 271 ES+I S A AP LYD+H+PTTP QK+ ++ SA T +PERGDM+AALGE TG AL+S+ M ++ VG +L KP I+ + + + LR L +FG+ YA +MD H + AD+R+ VRFVDDPELA+V+QR+R+VHDFWH L G+PPTVLGE+ALK+ EMV + LPV+A S GPL L ER +L Y+PWA + A +A L CV YE F+ P+ +R +LNI APP Sbjct: 26 ESAISSVAGAPQCRVLYDSHVPTTPLQKILLSITSALTVFANPERGDMLAALGEVTGRDALRSIHARMCSNPVGARILAEKPVIRSDKIEMNCLRALSTDSFGYHYATYMDTHDFHADDRSLVRFVDDPELAYVMQRHREVHDFWHTLFGVPPTVLGEIALKYVEMVHSMLPVSALSAFVGPLRLSREERCLLMNIYVPWASQAARSAHSLHCVMYEEEFETPIEELRQRLNIIVAPP 263
BLAST of NO07G03540 vs. NCBI_GenBank
Match: ETL26812.1 (hypothetical protein L916_19566 [Phytophthora parasitica]) HSP 1 Score: 247.7 bits (631), Expect = 4.300e-62 Identity = 125/248 (50.40%), Postives = 162/248 (65.32%), Query Frame = 0 Query: 25 TATILKNDESSIISP-APAPPGSDLYDTHIPTTPFQKLFIAGYSAATALRDPERGDMVAALGETTGLVALQSLREIMAADAVGCELLEAKPDIKEESVHPDRLRKLPPGTFGHEYACFMDHHGYSADERTAVRFVDDPELAFVIQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPVAAFSGLFGPLSLPATERKVLREQYIPWAVRTAVAAKPLMCVWYERRFDEPLNAMRAQLNITPAPPL 272 T I + S + P A P Y++H+PTTP QKL ++ SA T +PERGDM+AALGE TG AL+ + M AD VG +L KP I+ E++ D LR LP +FG YA FMD HG+ AD R+ VRFVDDPELA+V+QR+R+ HDFWH L +PPTVLGE+ALK+ EM ++LPV+A S GPL L + ER +L + Y+PWA R + A L CV YE F+ P+ +R +LNI APPL Sbjct: 27 TNPIATSFSSQALDPVAGLPQRRVQYESHMPTTPLQKLALSVTSALTVFANPERGDMLAALGEVTGRDALRRIHARMCADPVGARILAEKPVIRNENIDMDYLRALPAESFGRHYATFMDSHGFDADGRSLVRFVDDPELAYVMQRHRESHDFWHTLFNVPPTVLGEIALKYVEMAHSKLPVSALSAFVGPLRLTSEERCLLMKVYVPWANRASKNAHSLHCVMYEEEFETPIEELRQRLNIEVAPPL 274
BLAST of NO07G03540 vs. NCBI_GenBank
Match: OQR96904.1 (ubiquinone biosynthesis protein COQ4 [Thraustotheca clavata]) HSP 1 Score: 246.9 bits (629), Expect = 7.400e-62 Identity = 125/239 (52.30%), Postives = 159/239 (66.53%), Query Frame = 0 Query: 35 SIISPAPAPPGSD--LYDTHIPTTPFQKLFIAGYSAATALRDPERGDMVAALGETTGLVALQSLREIMAADAVGCELLEAKPDIKEESVHPDRLRKLPPGTFGHEYACFMDHHGYSADERTAVRFVDDPELAFVIQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPVAAFSGLFGPLSLPATERKVLREQYIPWAVRTAVAAKPLMCVWYERRFDEPLNAMRAQLNITPAPPL 272 S +P+ A P + Y H+PTTP QK+ +A +A + +PERGDM+AALG++TG VAL+ + M +D G ++L KP I+ D LR LP TFG+ Y FMD HG+ AD R+ VRFVDDPELA+V+QRYR++HDFWHVL GLPPTV GELALK+ E+VQT LPV SG GPL L ERK L +YIPWA R A LM V+YE+ + L +RA+LNI APP+ Sbjct: 11 SSAAPSAAGPATQHIQYLHHVPTTPLQKILVAATAAVSVFANPERGDMLAALGDSTGEVALRQMHLKMCSDPTGMKILAEKPRIRSTVTDVDALRSLPKETFGYAYTQFMDAHGFEADGRSHVRFVDDPELAYVLQRYRELHDFWHVLFGLPPTVFGELALKYVELVQTGLPVCTLSGFVGPLRLNCEERKDLFSRYIPWAYRAGKEAPFLMNVYYEQEYQTKLEDLRARLNIRVAPPV 249
BLAST of NO07G03540 vs. NCBI_GenBank
Match: ETI33042.1 (hypothetical protein F443_20235 [Phytophthora parasitica P1569] >ETL80046.1 hypothetical protein L917_19417 [Phytophthora parasitica]) HSP 1 Score: 246.1 bits (627), Expect = 1.300e-61 Identity = 125/248 (50.40%), Postives = 161/248 (64.92%), Query Frame = 0 Query: 25 TATILKNDESSIISP-APAPPGSDLYDTHIPTTPFQKLFIAGYSAATALRDPERGDMVAALGETTGLVALQSLREIMAADAVGCELLEAKPDIKEESVHPDRLRKLPPGTFGHEYACFMDHHGYSADERTAVRFVDDPELAFVIQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPVAAFSGLFGPLSLPATERKVLREQYIPWAVRTAVAAKPLMCVWYERRFDEPLNAMRAQLNITPAPPL 272 T I + S + P A P YD+H+PTTP QKL ++ SA T +PERGDM+AALGE TG AL+ + M AD VG +L KP I+ E++ D LR LP +FG YA FMD HG+ AD R+ VRFVDDPELA+V+QR+R+ HDFWH L +PPTVLGE+ALK+ EM ++LPV+A S GPL L + ER +L + Y+PWA R + A L CV YE F+ P+ +R +LNI AP L Sbjct: 27 TNPIATSFSSQALDPVAGLPQRRVQYDSHMPTTPLQKLALSVTSALTVFANPERGDMLAALGEVTGRDALRRIHARMCADPVGARILAEKPVIRNENIDMDYLRALPAESFGRHYATFMDSHGFDADGRSLVRFVDDPELAYVMQRHRESHDFWHTLFNVPPTVLGEIALKYVEMAHSKLPVSALSAFVGPLRLTSEERCLLMKVYVPWANRASKNAHSLHCVMYEEEFETPIEELRQRLNIEVAPSL 274
BLAST of NO07G03540 vs. NCBI_GenBank
Match: ETM33290.1 (hypothetical protein L914_19452 [Phytophthora parasitica]) HSP 1 Score: 246.1 bits (627), Expect = 1.300e-61 Identity = 125/248 (50.40%), Postives = 161/248 (64.92%), Query Frame = 0 Query: 25 TATILKNDESSIISP-APAPPGSDLYDTHIPTTPFQKLFIAGYSAATALRDPERGDMVAALGETTGLVALQSLREIMAADAVGCELLEAKPDIKEESVHPDRLRKLPPGTFGHEYACFMDHHGYSADERTAVRFVDDPELAFVIQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPVAAFSGLFGPLSLPATERKVLREQYIPWAVRTAVAAKPLMCVWYERRFDEPLNAMRAQLNITPAPPL 272 T I + S + P A P YD+H+PTTP QKL ++ SA T +PERGDM+AALGE TG AL+ + M AD VG +L KP I+ E++ D LR LP +FG YA FMD HG+ AD R+ VRFVDDPELA+V+QR+R+ HDFWH L +PPTVLGE+ALK+ EM ++LPV+A S GPL L + ER +L + Y+PWA R + A L CV YE F+ P+ +R +LNI AP L Sbjct: 27 TNPIATSFSSQALDPVAGLPQRRVQYDSHMPTTPLQKLALSVTSALTVFANPERGDMLAALGEVTGRDALRRIHARMCADPVGARILAEKPVIRNENIDMDYLRALPAESFGRHYATFMDSHGFDADGRSLVRFVDDPELAYVMQRHRESHDFWHTLFNVPPTVLGEIALKYVEMAHSKLPVSALSAFVGPLRLTSEERCLLMKVYVPWANRASKNAHSLHCVMYEEEFETPIEELRQRLNIEVAPSL 274
BLAST of NO07G03540 vs. NCBI_GenBank
Match: OWZ08404.1 (Ubiquinone biosynthesis protein COQ4 [Phytophthora megakarya]) HSP 1 Score: 245.4 bits (625), Expect = 2.100e-61 Identity = 117/223 (52.47%), Postives = 154/223 (69.06%), Query Frame = 0 Query: 49 YDTHIPTTPFQKLFIAGYSAATALRDPERGDMVAALGETTGLVALQSLREIMAADAVGCELLEAKPDIKEESVHPDRLRKLPPGTFGHEYACFMDHHGYSADERTAVRFVDDPELAFVIQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPVAAFSGLFGPLSLPATERKVLREQYIPWAVRTAVAAKPLMCVWYERRFDEPLNAMRAQLNITPAPPL 272 YD+H+PTTP QK+ ++ SA T +PERGDM+AALGE TG AL+ + M AD VG +L KP I+ +++ + LR LP +FG YA FMD HG+ AD R+ VRFVDDPELA+V+QR+R+ HDFWH L +PPTVLGE+ LK+ E+V ++LPV+A S GPL L + ER +L + YIPWA R + A L CV YE F+ P+ +R +LNI APPL Sbjct: 30 YDSHMPTTPLQKIVLSITSALTVFTNPERGDMLAALGEVTGRDALRRIHARMCADPVGTRILVEKPLIRNDNIDMEYLRTLPADSFGRHYATFMDSHGFYADGRSLVRFVDDPELAYVMQRHREAHDFWHTLFDVPPTVLGEITLKYVELVHSQLPVSALSAFVGPLRLSSEERCLLMKVYIPWATRASKKAHSLHCVMYEEEFETPMEELRQRLNIDVAPPL 252
BLAST of NO07G03540 vs. NCBI_GenBank
Match: XP_008914325.1 (hypothetical protein PPTG_18020 [Phytophthora parasitica INRA-310] >ETK73376.1 hypothetical protein L915_19681 [Phytophthora parasitica] >ETN00313.1 hypothetical protein PPTG_18020 [Phytophthora parasitica INRA-310] >ETO61785.1 hypothetical protein F444_20251 [Phytophthora parasitica P1976] >ETP02850.1 hypothetical protein F441_20126 [Phytophthora parasitica CJ01A1] >ETP31036.1 hypothetical protein F442_20058 [Phytophthora parasitica P10297] >KUF90389.1 hypothetical protein AM588_10003326 [Phytophthora nicotianae] >KUG01821.1 Ubiquinone biosynthesis protein coq4 [Phytophthora nicotianae]) HSP 1 Score: 244.6 bits (623), Expect = 3.700e-61 Identity = 124/248 (50.00%), Postives = 161/248 (64.92%), Query Frame = 0 Query: 25 TATILKNDESSIISP-APAPPGSDLYDTHIPTTPFQKLFIAGYSAATALRDPERGDMVAALGETTGLVALQSLREIMAADAVGCELLEAKPDIKEESVHPDRLRKLPPGTFGHEYACFMDHHGYSADERTAVRFVDDPELAFVIQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPVAAFSGLFGPLSLPATERKVLREQYIPWAVRTAVAAKPLMCVWYERRFDEPLNAMRAQLNITPAPPL 272 T I + S + P A P Y++H+PTTP QKL ++ SA T +PERGDM+AALGE TG AL+ + M AD VG +L KP I+ E++ D LR LP +FG YA FMD HG+ AD R+ VRFVDDPELA+V+QR+R+ HDFWH L +PPTVLGE+ALK+ EM ++LPV+A S GPL L + ER +L + Y+PWA R + A L CV YE F+ P+ +R +LNI AP L Sbjct: 27 TNPIATSFSSQALDPVAGLPQRRVQYESHMPTTPLQKLALSVTSALTVFANPERGDMLAALGEVTGRDALRRIHARMCADPVGARILAEKPVIRNENIDMDYLRALPAESFGRHYATFMDSHGFDADGRSLVRFVDDPELAYVMQRHRESHDFWHTLFNVPPTVLGEIALKYVEMAHSKLPVSALSAFVGPLRLTSEERCLLMKVYVPWANRASKNAHSLHCVMYEEEFETPIEELRQRLNIEVAPSL 274
BLAST of NO07G03540 vs. NCBI_GenBank
Match: XP_002900049.1 (ubiquinone biosynthesis protein COQ4 [Phytophthora infestans T30-4] >EEY60676.1 ubiquinone biosynthesis protein COQ4 [Phytophthora infestans T30-4]) HSP 1 Score: 244.2 bits (622), Expect = 4.800e-61 Identity = 116/223 (52.02%), Postives = 153/223 (68.61%), Query Frame = 0 Query: 49 YDTHIPTTPFQKLFIAGYSAATALRDPERGDMVAALGETTGLVALQSLREIMAADAVGCELLEAKPDIKEESVHPDRLRKLPPGTFGHEYACFMDHHGYSADERTAVRFVDDPELAFVIQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPVAAFSGLFGPLSLPATERKVLREQYIPWAVRTAVAAKPLMCVWYERRFDEPLNAMRAQLNITPAPPL 272 YD+H+PT+P QKL ++ SA T +PERGDM+AALGE TG AL+ + M AD VG +L KP I+ + + D LR LP +FG YA FMD HG+ AD R+ VRFVDDPELA+V+QR+R++HDFWH L +PPT LGE+ALK+ EM ++LPV+A S GPL L + ER +L + Y+PWA R + A L CV YE F+ P+ +R +LN+ APPL Sbjct: 14 YDSHMPTSPLQKLVLSVTSALTVFANPERGDMLAALGEVTGRDALRRIHARMCADPVGARILAEKPVIRNDKIDMDYLRALPEDSFGRRYATFMDSHGFDADGRSPVRFVDDPELAYVMQRHRELHDFWHTLFDVPPTELGEIALKYVEMAHSKLPVSALSAFVGPLRLSSEERCLLVKVYVPWANRASRNAHSLHCVMYEEEFETPIEKLRQRLNVEVAPPL 236 The following BLAST results are available for this feature:
BLAST of NO07G03540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G03540 ID=NO07G03540|Name=NO07G03540|organism=Nannochloropsis oceanica|type=gene|length=834bpback to top protein sequence of NO07G03540.1 >NO07G03540.1-protein ID=NO07G03540.1-protein|Name=NO07G03540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=278bpback to top Synonyms
Publications
|