NO07G03510, NO07G03510 (gene) Nannochloropsis oceanica

Overview
NameNO07G03510
Unique NameNO07G03510
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1623
Alignment locationchr7:969833..971455 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:969833..971455 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
Homology
The following BLAST results are available for this feature:
BLAST of NO07G03510 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL100nonsL100Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G03510.1NO07G03510.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|661970gene_2689Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G03510.1NO07G03510.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G03510 ID=NO07G03510|Name=NO07G03510|organism=Nannochloropsis oceanica|type=gene|length=1623bp
ATGAGTGTGCTTGCAGCCGACGAGGCAGGCGAAGCAGCGGCTGCGGCCTT
CAGGGACCACGAGAGGAGAAAGCGGCGACGGCCCGCATTGGAGGAGGGTC
ACTCCAGCCCTCGTCGTTGTCCTCTTGTTATGAGTTACCAGGAGCATCCC
TCGGCGCTTACTATTCACGCAGCGTCCAGTCTAGATCAAGTTCAACGACA
ACATCGCAACGACCAAACGTCTGGGCCTAAGGCCGCATTAGTCCTCTCGG
AATGGCTGGGAAATGCTTTGGTCTGCCCGTCCTCCCCTTCCCAAAATCGC
GAGATCCATGTTTCCCTCTTAGGACAGCTCGTGGGAGCCGATGTAGCCCT
TCCACGGCACGTGGCCTTAATTTTGAGTTGTTTGGAGCATAGTTCCGATC
GGCGGGTGCGGCTTGAGGTGGTAGCTTTCTTGGCGGGGTTGACTCCAAAC
AATGTCTTCGAACACCTGCCCGTCTTGGCTGCACGTCTAGTCAGTGACCC
ATGTGCCACGATACGCATGGCAGTCCTCACAGCACTGTCGGGGCCATTCA
TTGCTTTATCGCAACCTTATGTGCCTTTGGTAATAGCCTGTCTGGAGGAC
ATGTCGGCCCCGGTCCGCCGAAGTGCAACCAAGGCACTAGTCCAAATCGG
GGGTAACGGCTTGCTTAAGCCAAAATACATCAATTCTTTGCGATATAATC
TCCTCTCTCGTTGCTCAGCCGTGCGTGAAGATAGCATGCAAGTGTTGTGC
GCCTTGCTCTATTTGACTCGTACGTGCTTTCGGGCGAAGCGATTGCTGGA
AGCACCACTGTGGAAGCAACACGGGGCAGTGGCCTCCTTAGCTGTGGCGC
GCGAGTCCAGCCCTGCCGTACGTGTCCTGGGTCTACAGTTTCTCACGGAT
CTTCCGCGGCATCTATGTGCACAACACGTGGGTATCGCTATTCAGCGTGT
GGGCGATGCCCGGCCGGAGGCACAGGCGGCAGCATTGACGTTCTTGCAAC
GTAACCTTGATCCGGATCTCCTTCGACCTCACGTGCATGCCCTCTTGCAG
CTCTTGCGTCCCTATCGGCCACACTCCTTCTCTTCTTCTTCTTACTCCTC
CTATTTGCCTTCCTCACTTTCGGCTCGTTGCGAATTGACGGTACTAAAGT
GCCTGCATTTGGTGCCAGAGCGAGCATTGGAGCCTTTCGTTGATGAAATA
ATTGCAGCTGTTAAAGCAGTGAAGGAGAGCAAGGACGAGAATGGTGGTCT
TGACAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGACGACGACATATTTAC
AATCTGTTCAGACTGCGGCTGTTGATGTGTTTGGATGCATGCGCACTGCA
GTAGTTTTGCCGCTGTTAGAAAAAACGTTGATGATATGGGTGTTTGGATG
TCTCTGTCCTCCTCTTCTTCCACCTCTCCATCCTTCTTCTACTCCATCTG
CTCCACCTTCCGTGCGAACGACGGACACCCTATTGGTCAGACAGGCAATG
AACATACTACAGCGGGTGCGGAACGCCGAAATAAAACAAGCCTGTCTTGC
AAGGCTAGCGACATCTTTAAGGGGGGGGGGGGGGGCAGCAACAGCATCCA
TTCCCACCAAGCACGGGTTCTGA
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protein sequence of NO07G03510.1

>NO07G03510.1-protein ID=NO07G03510.1-protein|Name=NO07G03510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=541bp
MSVLAADEAGEAAAAAFRDHERRKRRRPALEEGHSSPRRCPLVMSYQEHP
SALTIHAASSLDQVQRQHRNDQTSGPKAALVLSEWLGNALVCPSSPSQNR
EIHVSLLGQLVGADVALPRHVALILSCLEHSSDRRVRLEVVAFLAGLTPN
NVFEHLPVLAARLVSDPCATIRMAVLTALSGPFIALSQPYVPLVIACLED
MSAPVRRSATKALVQIGGNGLLKPKYINSLRYNLLSRCSAVREDSMQVLC
ALLYLTRTCFRAKRLLEAPLWKQHGAVASLAVARESSPAVRVLGLQFLTD
LPRHLCAQHVGIAIQRVGDARPEAQAAALTFLQRNLDPDLLRPHVHALLQ
LLRPYRPHSFSSSSYSSYLPSSLSARCELTVLKCLHLVPERALEPFVDEI
IAAVKAVKESKDENGGLDKQQQQQQQQQTTTYLQSVQTAAVDVFGCMRTA
VVLPLLEKTLMIWVFGCLCPPLLPPLHPSSTPSAPPSVRTTDTLLVRQAM
NILQRVRNAEIKQACLARLATSLRGGGGAATASIPTKHGF*
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Synonyms
Publications