NO07G03430, NO07G03430 (gene) Nannochloropsis oceanica

Overview
NameNO07G03430
Unique NameNO07G03430
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length835
Alignment locationchr7:948615..949449 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:948615..949449 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0015035protein disulfide oxidoreductase activity
GO:0009055electron transfer activity
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR002109Glutaredoxin
Homology
[Close]
BLAST of NO07G03430 vs. NCBI_GenBank
Match: POM78751.1 (Hypothetical protein PHPALM_3689 [Phytophthora palmivora var. palmivora])

HSP 1 Score: 70.5 bits (171), Expect = 4.500e-9
Identity = 41/112 (36.61%), Postives = 66/112 (58.93%), Query Frame = 0 
Query:    6 LLLYSSLTSDAVQEQGQRRAHALLTAKGIEFTEIDGADPRNIEKRNELFRL-GRKARYPQIYIERSDGK-INYVGGWEEVEAMNECCDMPKEILRANPHIQTFDQVFIHVKR 116
            ++L SS+ S A Q+        LL    I +TE+D +   N + RN  F + G +A YPQ++++  +GK I Y+G +++++ +NE  D+P EIL+AN  I T + VF  V R
Sbjct:    8 VVLTSSMVSIAEQKYEIGHLKQLLDGNKIIYTEVDCSLEENRDTRNRYFEVSGIRANYPQVFLQDPEGKCIKYIGSFKQIQELNEMNDVPPEILKAN-DIPTLNTVFADVSR 118
[Close]
BLAST of NO07G03430 vs. NCBI_GenBank
Match: XP_008911744.1 (hypothetical protein PPTG_16150 [Phytophthora parasitica INRA-310] >ETI37450.1 hypothetical protein F443_16545 [Phytophthora parasitica P1569] >ETK77673.1 hypothetical protein L915_16073 [Phytophthora parasitica] >ETL31119.1 hypothetical protein L916_15965 [Phytophthora parasitica] >ETL84372.1 hypothetical protein L917_15765 [Phytophthora parasitica] >ETM37542.1 hypothetical protein L914_15901 [Phytophthora parasitica] >ETN03200.1 hypothetical protein PPTG_16150 [Phytophthora parasitica INRA-310] >ETO66226.1 hypothetical protein F444_16520 [Phytophthora parasitica P1976] >ETP07311.1 hypothetical protein F441_16359 [Phytophthora parasitica CJ01A1] >ETP35384.1 hypothetical protein F442_16383 [Phytophthora parasitica P10297])

HSP 1 Score: 70.1 bits (170), Expect = 5.900e-9
Identity = 40/107 (37.38%), Postives = 65/107 (60.75%), Query Frame = 0 
Query:    6 LLLYSSLTSDAVQEQGQRRAHALLTAKGIEFTEIDGADPRNIEKRNELFRL-GRKARYPQIYIERSDGK-INYVGGWEEVEAMNECCDMPKEILRANPHIQTFDQVF 111
            ++L SS+ S A Q+        LL    I +TE+D +   N + RN  F + G +A YPQ++++  +GK I Y+G ++E++ +NE  D+P EIL+AN +I T + VF
Sbjct:    8 VVLTSSMVSIAEQKYEIGHLKQLLDGNKITYTEVDCSLEENRDTRNRYFEVSGIRANYPQVFLQDPEGKDIQYIGSFKEIQELNEMNDVPPEILKAN-NIPTLNTVF 113
[Close]
BLAST of NO07G03430 vs. NCBI_GenBank
Match: KUF86538.1 (hypothetical protein AM587_10004333 [Phytophthora nicotianae])

HSP 1 Score: 70.1 bits (170), Expect = 5.900e-9
Identity = 40/107 (37.38%), Postives = 65/107 (60.75%), Query Frame = 0 
Query:    6 LLLYSSLTSDAVQEQGQRRAHALLTAKGIEFTEIDGADPRNIEKRNELFRL-GRKARYPQIYIERSDGK-INYVGGWEEVEAMNECCDMPKEILRANPHIQTFDQVF 111
            ++L SS+ S A Q+        LL    I +TE+D +   N + RN  F + G +A YPQ++++  +GK I Y+G ++E++ +NE  D+P EIL+AN +I T + VF
Sbjct:  198 VVLTSSMVSIAEQKYEIGHLKQLLDGNKITYTEVDCSLEENRDTRNRYFEVSGIRANYPQVFLQDPEGKDIQYIGSFKEIQELNEMNDVPPEILKAN-NIPTLNTVF 303
[Close]
BLAST of NO07G03430 vs. NCBI_GenBank
Match: XP_024585969.1 (Thioredoxin-like fold [Plasmopara halstedii] >CEG49600.1 Thioredoxin-like fold [Plasmopara halstedii])

HSP 1 Score: 67.8 bits (164), Expect = 2.900e-8
Identity = 39/112 (34.82%), Postives = 64/112 (57.14%), Query Frame = 0 
Query:    6 LLLYSSLTSDAVQEQGQRRAHALLTAKGIEFTEIDGADPRNIEKRNELFRL-GRKARYPQIYIERSDG-KINYVGGWEEVEAMNECCDMPKEILRANPHIQTFDQVFIHVKR 116
            ++L SS+ S   Q+        LL    I + E+D +   N E RN  F + G +A YPQ++++ ++G  I Y+G ++E++ +NE  D+P E+L+AN +I T   VF  V R
Sbjct:    8 VVLTSSMVSIPEQKYEIGHLKQLLDGNKITYMEVDCSLEENRETRNRYFEVSGIRANYPQVFLQDAEGTNIKYIGSFKEIQELNEMNDVPSELLKAN-NIPTLSSVFADVLR 118
[Close]
BLAST of NO07G03430 vs. NCBI_GenBank
Match: KUF77284.1 (hypothetical protein AM587_10004273 [Phytophthora nicotianae])

HSP 1 Score: 66.2 bits (160), Expect = 8.500e-8
Identity = 37/99 (37.37%), Postives = 60/99 (60.61%), Query Frame = 0 
Query:   16 AVQEQGQRRAH--ALLTAKGIEFTEIDGADPRNIEKRNELFRL-GRKARYPQIYIERSDGK-INYVGGWEEVEAMNECCDMPKEILRANPHIQTFDQVF 111
            ++ EQ     H   LL    I +TE+D +   N + RN  F + G +A YPQ++++  +GK I Y+G ++E++ +NE  D+P EIL+AN +I T + VF
Sbjct:    3 SIAEQKYEIGHLKQLLDGNKITYTEVDCSLEENRDTRNRYFEVSGIRANYPQVFLQDPEGKDIQYIGSFKEIQELNEMNDVPPEILKAN-NIPTLNTVF 100
[Close]
BLAST of NO07G03430 vs. NCBI_GenBank
Match: XP_012203914.1 (hypothetical protein SPRG_09432 [Saprolegnia parasitica CBS 223.65] >KDO25489.1 hypothetical protein SPRG_09432 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 65.9 bits (159), Expect = 1.100e-7
Identity = 37/114 (32.46%), Postives = 66/114 (57.89%), Query Frame = 0 
Query:    4 KVLLLYSSLTSDAVQEQGQRRAHALLTAKGIEFTEIDGADPRNIEKRNELFRL-GRKARYPQIY-IERSDGKINYVGGWEEVEAMNECCDMPKEILRANPHIQTFDQVFIHVKR 116
            K ++L S+ +  A  +      +ALL AK I+  E+DG+    +++RN LF + G +  YPQ++ ++  +    ++G ++ +  MNE  D+P +I+  N +I TFD VF  V+R
Sbjct:    3 KCIVLVSNQSFSAENKSNTASLNALLDAKKIKRDEVDGSAEDMVDRRNALFGISGVRGSYPQVFLVDEGETTPRFIGLFDAIHDMNEMNDLPTDIIEQN-NILTFDAVFADVER 115
[Close]
BLAST of NO07G03430 vs. NCBI_GenBank
Match: OAO12866.1 (hypothetical protein AV274_5466 [Blastocystis sp. ATCC 50177/Nand II])

HSP 1 Score: 65.9 bits (159), Expect = 1.100e-7
Identity = 39/109 (35.78%), Postives = 52/109 (47.71%), Query Frame = 0 
Query:    6 LLLYSSLTSDAVQEQGQRRAHALLTAKGIEFTEIDGADPRNIEKRNELFRL----GRKARYPQIYIERSDGKINYVGGWEEVEAMNECCDMPKEILRANPHIQTFDQVF 111
            +LLYSSL  D +         A L  K I F +IDGA P N   RN LF L    G    YP  ++ + D  I Y+G W+ ++   +   + K  L A+P I TF   F
Sbjct:    7 ILLYSSL--DVMHSSNVLVLKAFLKQKNIIFEDIDGALPENKNIRNVLFDLAVKQGGTREYPSAFVMKEDKSITYIGNWDRIQEYLDTESIDKATLAAHPEIVTFSSFF 113
[Close]
BLAST of NO07G03430 vs. NCBI_GenBank
Match: OAO12987.1 (hypothetical protein AV274_5362 [Blastocystis sp. ATCC 50177/Nand II])

HSP 1 Score: 63.9 bits (154), Expect = 4.200e-7
Identity = 36/112 (32.14%), Postives = 56/112 (50.00%), Query Frame = 0 
Query:    3 NKVLLLYSSLTSDAVQEQGQRRAHALLTAKGIEFTEIDGADPRNIEKRNELFRL----GRKARYPQIYIERSDGKINYVGGWEEVEAMNECCDMPKEILRANPHIQTFDQVF 111
            ++ ++L S L S +         H  L   GI + EI+G +P N + RN+LFRL    G    YP  +I RS   I +VG W  V+ + +  + P   L+ +P I T  ++F
Sbjct:    4 DRFIILRSYLDSRSTANVSLFETH--LNELGIRYEEIEGTEPNNHDIRNDLFRLAEMKGGSREYPLFFILRSPDTIEFVGNWNTVQKLMDANNNPPSYLKQHPDIMTVSRLF 113
[Close]
BLAST of NO07G03430 vs. NCBI_GenBank
Match: XP_008612201.1 (hypothetical protein SDRG_08111 [Saprolegnia diclina VS20] >EQC34339.1 hypothetical protein SDRG_08111 [Saprolegnia diclina VS20])

HSP 1 Score: 63.5 bits (153), Expect = 5.500e-7
Identity = 35/109 (32.11%), Postives = 64/109 (58.72%), Query Frame = 0 
Query:    4 KVLLLYSSLTSDAVQEQGQRRAHALLTAKGIEFTEIDGADPRNIEKRNELFRL-GRKARYPQIY-IERSDGKINYVGGWEEVEAMNECCDMPKEILRANPHIQTFDQVF 111
            K ++L S+ +  A  +      +ALL AK I+  E+DG+    +++RN LF + G +  YPQ++ ++  +    ++G ++ ++ MNE  D+P +I+  N +I TFD VF
Sbjct:    3 KCIVLVSNQSFSAENKSNTSSLNALLDAKKIKRVEVDGSAEDMVDRRNTLFGISGVRGSYPQVFLVDEGETTPRFIGLFDAIQHMNEMNDLPTDIIEQN-NILTFDAVF 110
The following BLAST results are available for this feature:
BLAST of NO07G03430 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 19
Match NameE-valueIdentityDescription
POM78751.14.500e-936.61Hypothetical protein PHPALM_3689 [Phytophthora pal... [more]
XP_008911744.15.900e-937.38hypothetical protein PPTG_16150 [Phytophthora para... [more]
KUF86538.15.900e-937.38hypothetical protein AM587_10004333 [Phytophthora ... [more]
XP_024585969.12.900e-834.82Thioredoxin-like fold [Plasmopara halstedii] >CEG4... [more]
KUF77284.18.500e-837.37hypothetical protein AM587_10004273 [Phytophthora ... [more]
XP_012203914.11.100e-732.46hypothetical protein SPRG_09432 [Saprolegnia paras... [more]
OAO12866.11.100e-735.78hypothetical protein AV274_5466 [Blastocystis sp. ... [more]
OAO12987.14.200e-732.14hypothetical protein AV274_5362 [Blastocystis sp. ... [more]
XP_008612201.15.500e-732.11hypothetical protein SDRG_08111 [Saprolegnia dicli... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL100nonsL100Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000509NSK000509Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G03430.1NO07G03430.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|581154gene_2679Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100309g7gene3522Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G03430.1NO07G03430.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G03430 ID=NO07G03430|Name=NO07G03430|organism=Nannochloropsis oceanica|type=gene|length=835bp
ATGTCCAATAAGgtaaggaggaatagcaagagaacgagaaactgcaggag
cagcggcagccgcagcagttcgagaaggagtatgaaggggttgggtgagt
ggagtggagcaggccattgttttaggaagcgggctttccaaatcaaccgg
gctcctccgcattgcagccccttcctcctgtggtgtccgttccttttccc
catcctaccatttctgtgaatcttgtcatagatgtcgctgtattttgcgc
ttgatgtccccgaaccttccgtatgccttacctcccccttatgacccctc
cttcccccgctcgaccacctccccacccctccatcccgctgcatcaccac
gagatcaccgcaagaagcccgtattgatgtagtcagaagatctagttgat
caccttttccctaggtccatctctcccctcccttcccctctccccctgca
gGTGCTCCTCCTATATTCGAGTCTGACATCGGATGCGGTGCAAGAGCAAG
GCCAACGGCGGGCGCACGCCCTCCTGACAGCCAAAGGCATCGAGTTTACA
GAGATCGATGGAGCGGATCCGAGGAATATAGAGAAACGGAACGAGCTGTT
CCGATTGGGGCGGAAGGCGCGATACCCTCAGATTTACATCGAGAGGAGTG
ATGGAAAGATAAATTACGTGGGGGGATGGGAGGAGGTAGAGGCCATGAAC
GAGTGTTGTGACATGCCCAAGGAGATTTTGAGGGCGAATCCGCATATTCA
GACATTCGATCAGGTGTTTATCCATGTGAAGAGGACAAAGAGAAATAGCC
TCGGCTTGCCGCCGGCGGCGTCTTCGTATTCATAG
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protein sequence of NO07G03430.1

>NO07G03430.1-protein ID=NO07G03430.1-protein|Name=NO07G03430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=132bp
MSNKVLLLYSSLTSDAVQEQGQRRAHALLTAKGIEFTEIDGADPRNIEKR
NELFRLGRKARYPQIYIERSDGKINYVGGWEEVEAMNECCDMPKEILRAN
PHIQTFDQVFIHVKRTKRNSLGLPPAASSYS*
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Synonyms
Publications