NO07G03430, NO07G03430 (gene) Nannochloropsis oceanica

Overview
NameNO07G03430
Unique NameNO07G03430
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length835
Alignment locationchr7:948615..949449 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:948615..949449 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0015035protein disulfide oxidoreductase activity
GO:0009055electron transfer activity
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR002109Glutaredoxin
Homology
[Close]
BLAST of NO07G03430 vs. NCBI_GenBank
Match: EWM27023.1 (hypothetical protein Naga_100309g7 [Nannochloropsis gaditana])

HSP 1 Score: 189.1 bits (479), Expect = 8.700e-45
Identity = 93/129 (72.09%), Postives = 102/129 (79.07%), Query Frame = 0 
Query:    1 MSNKVLLLYSSLTSDAVQEQGQRRAHALLTAKGIEFTEIDGADPRNIEKRNELFRLGRKARYPQIYIERSDGKINYVGGWEEVEAMNECCDMPKEILRANPHIQTFDQVFIHVKRTKRNSLGLPPAASS 130
            M NKVLLL SSLTSDAVQE+ QRRA +LL AKG  F EIDGADP   EKRN+LF LG  ARYPQ +IER DGK+ YVGGWEEVEAMNEC DMP E+LRANP IQTFD VF HV+R KR+S+   P ASS
Sbjct:    1 MHNKVLLLVSSLTSDAVQEKEQRRARSLLEAKGTVFEEIDGADPLMTEKRNQLFGLGHTARYPQFFIEREDGKVTYVGGWEEVEAMNECSDMPVEVLRANPQIQTFDMVFAHVQRRKRSSVAAVPVASS 129
[Close]
BLAST of NO07G03430 vs. NCBI_GenBank
Match: XP_002177779.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50593.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 90.5 bits (223), Expect = 4.200e-15
Identity = 47/108 (43.52%), Postives = 69/108 (63.89%), Query Frame = 0 
Query:    4 KVLLLYSSLTSDAVQEQGQRRAHALLTAKGIEFTEIDGADPRNIEKRNELFRL-GRKARYPQIY-IERSDGKINYVGGWEEVEAMNECCDMPKEILRANPHIQTFDQV 110
            +VL+L S+   +  Q Q Q RA +LL A+GI F  +DGADP N E R++LF + G +A YPQ + ++ SD    ++G WE+VEA+N+   +P  IL +NP I T+  V
Sbjct:    8 QVLVLVSNTNFNRGQVQNQNRAVSLLNARGISFETLDGADPTNKELRDKLFEISGVRANYPQFFLVDGSDNIPRFLGDWEKVEALNDASSLPDHILESNPSIVTWQNV 115
[Close]
BLAST of NO07G03430 vs. NCBI_GenBank
Match: GAX26029.1 (hypothetical protein FisN_4Hu473 [Fistulifera solaris])

HSP 1 Score: 84.0 bits (206), Expect = 3.900e-13
Identity = 41/104 (39.42%), Postives = 64/104 (61.54%), Query Frame = 0 
Query:    7 LLYSSLTSDAVQEQGQRRAHALLTAKGIEFTEIDGADPRNIEKRNELFRL-GRKARYPQIYIERSDGKINYVGGWEEVEAMNECCDMPKEILRANPHIQTFDQV 110
            +L + L  +  Q Q Q RA  LL  +GI +  IDGADP N E RN+LF + GR+  YPQ ++   +  + +VG ++ +EAMN+   +P EIL  +P I T++++
Sbjct:    1 MLMTGLGMNRAQRQNQERAMHLLEGRGIPYETIDGADPENRETRNKLFSISGRRGTYPQFFL-LGEESVEFVGDFDTIEAMNDASALPCEILERHPEIMTWEKI 103
[Close]
BLAST of NO07G03430 vs. NCBI_GenBank
Match: XP_002286222.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED95863.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 82.8 bits (203), Expect = 8.700e-13
Identity = 37/110 (33.64%), Postives = 65/110 (59.09%), Query Frame = 0 
Query:    2 SNKVLLLYSSLTSDAVQEQGQRRAHALLTAKGIEFTEIDGADPRNIEKRNELFRL-GRKARYPQIYIERSDGKINYVGGWEEVEAMNECCDMPKEILRANPHIQTFDQVF 111
            + K+++L S+   D  Q   Q +A +   ++ +    +DG D    EKRNELF + G +  YPQ + E  +G I++ G +E++E +NE   +P E+L  +P I+T+++VF
Sbjct:    4 AKKLIVLVSNGCHDRTQSSNQEKAQSWFLSRKVPMIIVDGMDANQREKRNELFEISGIRGNYPQFFFEDKEGSISFFGSFEKIEQLNETSGLPAEVLAQHPEIETWEKVF 113
[Close]
BLAST of NO07G03430 vs. NCBI_GenBank
Match: CBJ31037.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 82.4 bits (202), Expect = 1.100e-12
Identity = 37/78 (47.44%), Postives = 55/78 (70.51%), Query Frame = 0 
Query:   34 IEFTEIDGADPRNIEKRNELFRL-GRKARYPQIYIERSDGKINYVGGWEEVEAMNECCDMPKEILRANPHIQTFDQVF 111
            + + E+DG+D    E RN L+ + G + +YPQ++IER DG++ +VG W +VE++NEC  +P EIL ANP I+TF  VF
Sbjct:   10 VTYEEVDGSDAATQEARNNLWTVSGHRGKYPQVFIER-DGELEFVGLWSDVESLNECEALPPEILEANPEIKTFKAVF 86
[Close]
BLAST of NO07G03430 vs. NCBI_GenBank
Match: GAX92925.1 (Hypothetical protein PINS_000850 [Pythium insidiosum])

HSP 1 Score: 79.3 bits (194), Expect = 9.700e-12
Identity = 46/117 (39.32%), Postives = 67/117 (57.26%), Query Frame = 0 
Query:    1 MSNKVLLLYSSLTSDAVQEQGQRRAHALLTAKGIEFTEIDGADPRNIEKRNELFRL-GRKARYPQIYIERSDGK-INYVGGWEEVEAMNECCDMPKEILRANPHIQTFDQVFIHVKR 116
            M  + ++L SS+ S A Q+    +   +L    I +TEID +   N   R+  F L G +  YPQ++++  DG+ I Y+G   E+E +NE CD+P+EIL AN HIQT   VF  V R
Sbjct:    1 MVKECVVLTSSMVSIAEQKAQIEKTKHILDGNRIXYTEIDCSQEDNRATRDRYFELSGVRGNYPQVFLQSEDGQDIKYLGSXAEIEQLNEMCDVPQEILDAN-HIQTLKTVFEEVPR 116
[Close]
BLAST of NO07G03430 vs. NCBI_GenBank
Match: OQR93177.1 (hypothetical protein THRCLA_22332 [Thraustotheca clavata])

HSP 1 Score: 78.2 bits (191), Expect = 2.200e-11
Identity = 42/117 (35.90%), Postives = 71/117 (60.68%), Query Frame = 0 
Query:    1 MSNKVLLLYSSLTSDAVQEQGQRRAHALLTAKGIEFTEIDGADPRNIEKRNELFRL-GRKARYPQIYIERSDGKI-NYVGGWEEVEAMNECCDMPKEILRANPHIQTFDQVFIHVKR 116
            M+ K ++L S  +  A  +      +ALL AK I+  E+DG+   N+E+RN+LF + G +  YPQ++++  D     ++G +E ++ MNE  D+P E+++ N +I TFD VF  V+R
Sbjct:    1 MTKKCIVLVSHQSFSAENKSNTSSLNALLDAKKIKRDEVDGSAEHNVERRNQLFNISGVRGTYPQVFLQDEDESTPQFIGFFEAIQDMNEMNDLPAELVQQN-NILTFDAVFADVER 116
[Close]
BLAST of NO07G03430 vs. NCBI_GenBank
Match: XP_008911747.1 (hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >XP_008911748.1 hypothetical protein, variant 4 [Phytophthora parasitica INRA-310] >ETI37453.1 hypothetical protein, variant 3 [Phytophthora parasitica P1569] >ETI37454.1 hypothetical protein, variant 4 [Phytophthora parasitica P1569] >ETK77676.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETK77677.1 hypothetical protein, variant 4 [Phytophthora parasitica] >ETL31122.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETL31123.1 hypothetical protein, variant 4 [Phytophthora parasitica] >ETL84375.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETL84376.1 hypothetical protein, variant 4 [Phytophthora parasitica] >ETM37545.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETM37546.1 hypothetical protein, variant 4 [Phytophthora parasitica] >ETN03203.1 hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >ETN03204.1 hypothetical protein, variant 4 [Phytophthora parasitica INRA-310] >ETO66229.1 hypothetical protein, variant 3 [Phytophthora parasitica P1976] >ETO66230.1 hypothetical protein, variant 4 [Phytophthora parasitica P1976] >ETP07314.1 hypothetical protein, variant 3 [Phytophthora parasitica CJ01A1] >ETP07315.1 hypothetical protein, variant 4 [Phytophthora parasitica CJ01A1] >ETP35387.1 hypothetical protein, variant 3 [Phytophthora parasitica P10297] >ETP35388.1 hypothetical protein, variant 4 [Phytophthora parasitica P10297])

HSP 1 Score: 72.8 bits (177), Expect = 9.000e-10
Identity = 42/112 (37.50%), Postives = 67/112 (59.82%), Query Frame = 0 
Query:    6 LLLYSSLTSDAVQEQGQRRAHALLTAKGIEFTEIDGADPRNIEKRNELFRL-GRKARYPQIYIERSDGK-INYVGGWEEVEAMNECCDMPKEILRANPHIQTFDQVFIHVKR 116
            ++L SS+ S A Q+        LL    I +TE+D +   N + RN  F + G +A YPQ++++  +GK I Y+G ++E++ +NE  D+P EIL+AN +I T + VF  V R
Sbjct:    8 VVLTSSMVSIAEQKYEIGHLKQLLDGNKITYTEVDCSLEENRDTRNRYFEVSGIRANYPQVFLQDPEGKDIQYIGSFKEIQELNEMNDVPPEILKAN-NIPTLNTVFADVAR 118
[Close]
BLAST of NO07G03430 vs. NCBI_GenBank
Match: OQR82592.1 (hypothetical protein ACHHYP_15754 [Achlya hypogyna])

HSP 1 Score: 72.0 bits (175), Expect = 1.500e-9
Identity = 40/115 (34.78%), Postives = 68/115 (59.13%), Query Frame = 0 
Query:    4 KVLLLYSSLTSDAVQEQGQRRAHALLTAKGIEFTEIDGADPRNIEKRNELFRL-GRKARYPQIYI-ERSDGKINYVGGWEEVEAMNECCDMPKEILRANPHIQTFDQVFIHVKRT 117
            K ++L S+ +  A  +       ALL AK I+  E+DG+    +++RN LF + G +  YPQ+++ +  +    ++G ++ ++ MNE  D+PKEI+  N +I TFD VF  V+RT
Sbjct:    3 KCIVLVSNQSFSAENKSNTASLVALLNAKKIKREEVDGSAEDQVDRRNALFGISGVRGTYPQVFLQDEGEATPRFIGLFDAIQDMNEMNDLPKEIIEQN-NILTFDTVFADVERT 116
[Close]
BLAST of NO07G03430 vs. NCBI_GenBank
Match: GBG34582.1 (Hypothetical Protein FCC1311_108032 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 71.6 bits (174), Expect = 2.000e-9
Identity = 42/116 (36.21%), Postives = 65/116 (56.03%), Query Frame = 0 
Query:    1 MSNKVLLLYSSLTSDAVQEQGQRRAHALLTAKGIEFTEIDGADPRNIEKRNELFRL-GRKARYPQIYIERSDG-KINYVGGWEEVEAMNECCDMPKEILRANPHIQTFDQVFIHVK 115
            MS+K L+L +        E GQRR    +  K I + E+D  D +++  R EL  + G    YPQ++I  +DG +  YVG +E++E++ E  D+ +EIL  NP ++TF  VF   K
Sbjct:    1 MSHKALILVTPSPPTIATENGQRRVITWMQTKKIRYQEVDAIDEKDV--RKELTAISGVTGNYPQVFI--TDGEETTYVGDYEKIESLVELDDVDEEILAKNPDLKTFKMVFADCK 112
The following BLAST results are available for this feature:
BLAST of NO07G03430 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 19
Match NameE-valueIdentityDescription
EWM27023.18.700e-4572.09hypothetical protein Naga_100309g7 [Nannochloropsi... [more]
XP_002177779.14.200e-1543.52predicted protein [Phaeodactylum tricornutum CCAP ... [more]
GAX26029.13.900e-1339.42hypothetical protein FisN_4Hu473 [Fistulifera sola... [more]
XP_002286222.18.700e-1333.64predicted protein [Thalassiosira pseudonana CCMP13... [more]
CBJ31037.11.100e-1247.44conserved unknown protein [Ectocarpus siliculosus][more]
GAX92925.19.700e-1239.32Hypothetical protein PINS_000850 [Pythium insidios... [more]
OQR93177.12.200e-1135.90hypothetical protein THRCLA_22332 [Thraustotheca c... [more]
XP_008911747.19.000e-1037.50hypothetical protein, variant 3 [Phytophthora para... [more]
OQR82592.11.500e-934.78hypothetical protein ACHHYP_15754 [Achlya hypogyna... [more]
GBG34582.12.000e-936.21Hypothetical Protein FCC1311_108032 [Aurantiochytr... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL100nonsL100Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000509NSK000509Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G03430.1NO07G03430.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|581154gene_2679Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100309g7gene3522Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G03430.1NO07G03430.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G03430 ID=NO07G03430|Name=NO07G03430|organism=Nannochloropsis oceanica|type=gene|length=835bp
ATGTCCAATAAGgtaaggaggaatagcaagagaacgagaaactgcaggag
cagcggcagccgcagcagttcgagaaggagtatgaaggggttgggtgagt
ggagtggagcaggccattgttttaggaagcgggctttccaaatcaaccgg
gctcctccgcattgcagccccttcctcctgtggtgtccgttccttttccc
catcctaccatttctgtgaatcttgtcatagatgtcgctgtattttgcgc
ttgatgtccccgaaccttccgtatgccttacctcccccttatgacccctc
cttcccccgctcgaccacctccccacccctccatcccgctgcatcaccac
gagatcaccgcaagaagcccgtattgatgtagtcagaagatctagttgat
caccttttccctaggtccatctctcccctcccttcccctctccccctgca
gGTGCTCCTCCTATATTCGAGTCTGACATCGGATGCGGTGCAAGAGCAAG
GCCAACGGCGGGCGCACGCCCTCCTGACAGCCAAAGGCATCGAGTTTACA
GAGATCGATGGAGCGGATCCGAGGAATATAGAGAAACGGAACGAGCTGTT
CCGATTGGGGCGGAAGGCGCGATACCCTCAGATTTACATCGAGAGGAGTG
ATGGAAAGATAAATTACGTGGGGGGATGGGAGGAGGTAGAGGCCATGAAC
GAGTGTTGTGACATGCCCAAGGAGATTTTGAGGGCGAATCCGCATATTCA
GACATTCGATCAGGTGTTTATCCATGTGAAGAGGACAAAGAGAAATAGCC
TCGGCTTGCCGCCGGCGGCGTCTTCGTATTCATAG
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protein sequence of NO07G03430.1

>NO07G03430.1-protein ID=NO07G03430.1-protein|Name=NO07G03430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=132bp
MSNKVLLLYSSLTSDAVQEQGQRRAHALLTAKGIEFTEIDGADPRNIEKR
NELFRLGRKARYPQIYIERSDGKINYVGGWEEVEAMNECCDMPKEILRAN
PHIQTFDQVFIHVKRTKRNSLGLPPAASSYS*
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Synonyms
Publications