NO07G03420, NO07G03420 (gene) Nannochloropsis oceanica

Overview
NameNO07G03420
Unique NameNO07G03420
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5082
Alignment locationchr7:942797..947878 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:942797..947878 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR026910Shisa
Homology
The following BLAST results are available for this feature:
BLAST of NO07G03420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL100nonsL100Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G03420.1NO07G03420.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|336103gene_2678Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G03420.1NO07G03420.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G03420 ID=NO07G03420|Name=NO07G03420|organism=Nannochloropsis oceanica|type=gene|length=5082bp
ATGCAAGAGTCCACAAGCTTAAGATCGGCGCCGGTGGCACCCGGATCCTC
CACCGCTTACATGAGCCTGATTGACACTCAAGCCTTCCCTTATTCTTCCT
TGTTCGCCGCCTCCTCGACAAACCAAAGGGGAACGCAAAAGGCTAGGGAG
GAGCAGCAACAGACGCAGCCGCCGCTGCAAGAGCAGCCCTGCACTTCCAT
CATAAGCCTGTTCGACACCCAGGCGTCCTTTAAAGAGCAGGGGAAAGGCG
AGCAGCAACAGACGCAGCCGCAAGAGCAGCCCTCTACCACCGTCATGAAT
TTGTTTGACACCCAGACGTCGTCTCGCTCGTCCTCGCTTGCAGCATCGGG
AGCAAGGCACCAAGGAGAGCAGGAGGCTAGGGAGGAGCAGCAACAGACGC
AGCCGCAAGAGCAGCCCTCTACCACCGTCATGAATTTGTTTGACACCCAG
ACGTCGTCTCGCTCGTCCTCGCTTGCAGCATCGGGAGCAAGGCACCAAGG
AGAGCAGGAGGCTAGGGAGGAGCAGCAACAGACGCAGCCGCAAGAGCAGC
CCTCTACCACCGTCATGAATTTGTTTGACACCCAGACGTCGTCTCGCTCG
TCCTCGCTTGCAGCATCGGGAGCAAGGCACCAAGGAGAGCAGGAGGCTAG
GGAGGAGCAGCAACAGACGCAGCCGCAAGAGCAGCCCTCTACCACCGTCA
TGAATTTGTTTGACACCCAGACGTCGTCTCGCTCGTCCTCGCTTGCAGCA
TCGGGAGCAAGGCACCAAGGAGAGCAGGAGGCTAGGGAGGAGCAGCAACA
GACGCAGCCGCAAGTGCAGCCGCAAGAGCAGCCCTCTACCACCGTCATGA
ATTTGTTTGACACCCAGACGTCGTCTCGCTCGTCCTCGCTTGCAGCATCG
GGAGCAAGGCACCAAGGAGAGCAGGAGGCTAGGGAGGAGCAGCAACAGAC
GCAGCCGCAAGAGCAGCCCTCTACCACCGTCATGAATTTGTTTGACACCC
AGACGTCGTCTCGCTCGTCCTCGCTTGCAGCATCGGGAGCAAGGCACCAA
GGAGAGCAAGAGGCTAGGGAGGAGCAGCAACAGACGCAGCCGCAAGAGCA
GCCCTCTACCACCGTCATGAATTTGTTTGACACCCAGACGTCGTCTCGCT
CGTCCTCGCTTGCAGCATCGGGAGCAAGGCACCAAGGAGAGCAGGAGGCT
AGGGAGGAGCAGCAACAGACGCAGCCGCAAGAGCAGCCCTCTACCACCGT
CATGAATTTGTTTGACACCCAGACGTCGTCTCGCTCGTCCTCGCTTGCAG
CATCGGGAGCAAGGCACCAAGGAGAGCAGGAGGCTAGGGAGGAGCAGCAA
CAGACGCAGCCGCAAGAGCAGCCCTCTACCACCGTCATGAATTTGTTTGA
CACCCAGACGCCGTCTCGCTCGTCCTCGCTTGCAGCATCGGGAGCAAGGC
ACCAAGGAGAGCAGGAGGCTAGGGAGGAGCAGCAACAGACGCAGCCGCAA
GAGCAGCCCTCTACCACCGTCATGAATTTGTTTGACACCCAGACGTCGTC
TCGCTCGTCCTCGCTTGCAGCATCGGGAGCAAGGCACCAAGGAGAGCAGG
AGGCTAGGGAGGAGCAGCAACAGACGCAGCCGCAAGAGCAGCCCTCTACC
ACCGTCATGAATTTGTTTGACACCCAGACGTCGTCTCGCTCGTCCTCGCT
TGCAGCATCGGGAGCAAGGCACCAAGGAGAGCAGGAGGCTAGGGAGGAGC
AGCAACAGACGCAGCCGCAAGAGCAGCCCTCTACCACCGTCATGAATTTG
TTTGACACCCAGACGTCGTCTCGCTCGTCCTCGCTTGCAGCATCGGGAGC
AAGGCACCAAGGAGAGCAGGAGGCTAGGGAGGAGCAGCAACAGACGCAGC
CGCAAGTGCAGCCCTCTACCACCGTCATGAATTTGTTTGACACCCAGACG
TCGTCTCGCTCGTCCTCGCTTGCAGCATCGGGAGCAAGGCACCAAGGAGA
GCAGGAGGCTAGGGAGGAGCAGCAACAGACGCAGCCGCAAGAGCAGCCCT
CTACCACCGTCATGAATTTGTTTGACACCCAGACGTCGTCTCGCTCGTCC
TCGCTTGCAGCATCGGGAGCAAGGCACCAAGGAGAGCAGGAGGCTAGGGA
GGAGCAGCAACAGACGCAGCCGCAAGAGCAGCCCTCTACCACCGTCATGA
ATTTGTTTGACACCCAGACGTCGTCTCGCTCGTCCTCGCTTGCAGCATCG
GGAGCAAGGCACCAAGGAGAGCAGGAGGCTAGGGAGGAGCAGCAACAGAC
GCAGCCGCAAGAGCAGCCCTCTACCACCGTCATGAATTTGTTTGACACCC
AGACGTCGTCTCGCTCGTCCTCGCTTGCAGCATCGGGAGCAAGGCACCAA
GGAGAGCAAGAGGCTAGGGAGGAGCAGCAACAGACGCAGCCGCAAGAGCA
GCCCTCTACCACCGTCATGAATTTGTTTGACACCCAGACGTCGTCTCGCT
CGTCCTCGCTTGCAGCATCGGGAGCAAGGCACCAAGGAGAGCAGGAGGCT
AGGGAGGAGCAGCAACAGACGCAGCCGCAAGTGCAGCCGCAAGAGCAGCC
CTCTACCACCGTCATGAATTTGTTTGACACCCAGACGTCGTCTCGCTCGT
CCTCGCTTGCAGCATCGGGAGCAAGGCACCAAGGAGAGCAGGAGGCTAGG
GAGGAGCAGCAACAGACGCAGCCGCAAGTGCAGCCCTCTACCACCGTCAT
GAATTTGTTTGACACCCAGACGTCGTCTCGCTCGTCCTCGCTTGCAGCAT
CGGGAGCAAGGCACCAAGGAGAGCAGGAGGCTAGGGAGGAGCAGCAACAG
ACGCAGCCGCAAGAGCAGCCCTCTACCACCGTCATGAATTTGTTTGACAC
CCAGACGTCGTCTCGCTCGTCCTCGCTTGCAGCATCGGGAGCAAGGCACC
AAGGAGAGCAGGAGGCTAGGGAGGAGCAGCAACAGACGCAGCCGCAAGAG
CAGCCCTCTACCACCGTCATGAATTTGTTTGACACCCAGACGTCGTCTCG
CTCGTCCTCGCTTGCAGCATCGGGAGCAAGGCACCAAGGAGAGCAAGAGG
CTAGGGAGGAGCAGCAACAGACGCAGCCGCAAGAGCAGCCCTCTACCACC
GTCATGAATTTGTTTGACACCCAGACGTCGTCTCGCTCGTCCTCGCTTGC
AGCATCGGGAGCAAGGCACCAAGGAGAGCAGGAGGCTAGGGAGGAGCAGC
AACAGACGCAGCCGCAAGTGCAGCCGCAAGAGCAGCCCTCTACCACCGTC
ATGAATTTGTTTGACACCCAGACGTCGTCTCGCTCGTCCTCGCTTGCAGC
ATCGGGAGCAAGGCACCAAGGAGAGCAGGAGGCTAGGGAGGAGCAGCAAC
AGACGCAGCCGCAAGTGCAGCCCTCTACCACCGTCATGAATTTGTTTGAC
ACCCAGACGTCGTCTCGCTCGTCCTCGCTTGCAGCATCGGGAGCAAGGCA
CCAAGGAGAGCAGGAGGCTAGGGAGGAGCAGCAACAGACGCAGCCGCAAG
TGCAGCCGCAAGAGCAGCCCTCTACCACCGTCATGAATTTGTTTGACACC
CAGACGTCGTCTCGCTCGTCCTCGCTTGCAGCATCGGGAGCAAGGCACCA
AGGAGAGCAGGAGGCTAGGGAGGAGCAGCAACAGACGCAGCCGCAAGAGC
AGCCCTCTACCACCGTCATGAATTTGTTTGACACCCAGACGTCGTCTCGC
TCGTCCTCGCTTGCAGCATCGGGAGCAAGGCACCAAGGAGAGCAGGAGGC
TAGGGAGGAGCAGCAACAGACGCAGCCGCAAGAGCAGCCCTCTACCACCG
TCATGAATTTGTTTGACACCCAGACGCCGTCTCGCTCGTCCTCGCTTGCA
GCATCGGGAGCAAGGCACCAAGGAGAGCAGGAGGCTAGGGAGGAGCAGCA
ACAGACGCAGCCGCAAGTGCAGCCGCAAGAGCAGCCCTCTACCACCGTCA
TGAATTTGTTTGACATCCAAGCTCGTCCTGTCTCTTCCTCTCCTCCGTTT
ACTTACTCAACTCTTCGTCGTACAGCCAGCGGCGCAATCTCCCTCGTACC
CTTTCCCAAGTCTCCCACCTGCATCGCTGCTACCATCCCACGTCGTGCAT
GTCACGAAGAAGAGATCAAGCAATACGGAGCCCCTCTCGTCCTCCCTGAC
GGTGATGCCGACCTCCCCTCCCCCTTCGTGCCTATTTCTTTTGAAGCGAC
ACCGGAGAATACGAACCGGATGGATTCTCTACAAGATGAAGGAGAGGAAG
GTGACGTCTTGGGAGACACGCGAGAGTCCGAGATGTCTGCACAAACTGTT
CCCCTTCCTCGTTCTCCCAACTTGTACCTCGCCTTCACCCGTCGGAGCAA
CAGTGACAACAACAACAACAACAACAACAACAACAACAACAACAACAACA
ACAACAACAACAACAACAACAACAACAACAACGATAGCAACAACAAGAAG
AACCGAAAGATTAAGACCAAGGGCAAGAGCAGCATAGCAAGCAACTTCCG
CAAACTCTTCCGTCGGGGCGCCCACTCTTCCTTCTACCCTTCTTCCTCAC
CCGACGGAACACCGCAGCAGCAGCAGCAGCAACAGCAACAAGCACCGAGT
CCTCACTCCATTTATCGTTCACCTATAAACCCCAGAGGCAAGGCTGAGAG
CGGTACTGCTGTAGCTACTGCTGCAGGCACCACCTTCTCCTCCACAGTCT
CATCTGTCTCTCATCCGGGATCTGCCTCCTCCCCTTCCTCCACTGTCGTC
TCCACCCCCTCCTTGAAAACAATCAGCAATTCCACCACCACATCCCACCC
TCGCTCCTCCTCTTTACTCTCCTCCTCCTCCATATCGTCCGCATCATCCG
CAGCCTCTTTCTCCTCCTCTTTCCGCGCAGAAGGTGGTGGAGGAAGAGGA
AGAGGAGAAGGAGGGGTAAAACCTCTTGATTCTCCAGCTTCGGCCCCTCC
CCCCTCCCCGCAGCTTAAAGATCGCCTGGAACGGTTTAGCAGGCTTATGT
CCAGCACTGACGAATATGGAGGGGATATGTAA
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protein sequence of NO07G03420.1

>NO07G03420.1-protein ID=NO07G03420.1-protein|Name=NO07G03420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1694bp
MQESTSLRSAPVAPGSSTAYMSLIDTQAFPYSSLFAASSTNQRGTQKARE
EQQQTQPPLQEQPCTSIISLFDTQASFKEQGKGEQQQTQPQEQPSTTVMN
LFDTQTSSRSSSLAASGARHQGEQEAREEQQQTQPQEQPSTTVMNLFDTQ
TSSRSSSLAASGARHQGEQEAREEQQQTQPQEQPSTTVMNLFDTQTSSRS
SSLAASGARHQGEQEAREEQQQTQPQEQPSTTVMNLFDTQTSSRSSSLAA
SGARHQGEQEAREEQQQTQPQVQPQEQPSTTVMNLFDTQTSSRSSSLAAS
GARHQGEQEAREEQQQTQPQEQPSTTVMNLFDTQTSSRSSSLAASGARHQ
GEQEAREEQQQTQPQEQPSTTVMNLFDTQTSSRSSSLAASGARHQGEQEA
REEQQQTQPQEQPSTTVMNLFDTQTSSRSSSLAASGARHQGEQEAREEQQ
QTQPQEQPSTTVMNLFDTQTPSRSSSLAASGARHQGEQEAREEQQQTQPQ
EQPSTTVMNLFDTQTSSRSSSLAASGARHQGEQEAREEQQQTQPQEQPST
TVMNLFDTQTSSRSSSLAASGARHQGEQEAREEQQQTQPQEQPSTTVMNL
FDTQTSSRSSSLAASGARHQGEQEAREEQQQTQPQVQPSTTVMNLFDTQT
SSRSSSLAASGARHQGEQEAREEQQQTQPQEQPSTTVMNLFDTQTSSRSS
SLAASGARHQGEQEAREEQQQTQPQEQPSTTVMNLFDTQTSSRSSSLAAS
GARHQGEQEAREEQQQTQPQEQPSTTVMNLFDTQTSSRSSSLAASGARHQ
GEQEAREEQQQTQPQEQPSTTVMNLFDTQTSSRSSSLAASGARHQGEQEA
REEQQQTQPQVQPQEQPSTTVMNLFDTQTSSRSSSLAASGARHQGEQEAR
EEQQQTQPQVQPSTTVMNLFDTQTSSRSSSLAASGARHQGEQEAREEQQQ
TQPQEQPSTTVMNLFDTQTSSRSSSLAASGARHQGEQEAREEQQQTQPQE
QPSTTVMNLFDTQTSSRSSSLAASGARHQGEQEAREEQQQTQPQEQPSTT
VMNLFDTQTSSRSSSLAASGARHQGEQEAREEQQQTQPQVQPQEQPSTTV
MNLFDTQTSSRSSSLAASGARHQGEQEAREEQQQTQPQVQPSTTVMNLFD
TQTSSRSSSLAASGARHQGEQEAREEQQQTQPQVQPQEQPSTTVMNLFDT
QTSSRSSSLAASGARHQGEQEAREEQQQTQPQEQPSTTVMNLFDTQTSSR
SSSLAASGARHQGEQEAREEQQQTQPQEQPSTTVMNLFDTQTPSRSSSLA
ASGARHQGEQEAREEQQQTQPQVQPQEQPSTTVMNLFDIQARPVSSSPPF
TYSTLRRTASGAISLVPFPKSPTCIAATIPRRACHEEEIKQYGAPLVLPD
GDADLPSPFVPISFEATPENTNRMDSLQDEGEEGDVLGDTRESEMSAQTV
PLPRSPNLYLAFTRRSNSDNNNNNNNNNNNNNNNNNNNNNNNNNDSNNKK
NRKIKTKGKSSIASNFRKLFRRGAHSSFYPSSSPDGTPQQQQQQQQQAPS
PHSIYRSPINPRGKAESGTAVATAAGTTFSSTVSSVSHPGSASSPSSTVV
STPSLKTISNSTTTSHPRSSSLLSSSSISSASSAASFSSSFRAEGGGGRG
RGEGGVKPLDSPASAPPPSPQLKDRLERFSRLMSSTDEYGGDM*
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Synonyms
Publications