NO07G03380, NO07G03380 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G03380 vs. NCBI_GenBank
Match: ETO80589.1 (uracil-DNA glycosylase [Phytophthora parasitica P1976]) HSP 1 Score: 270.0 bits (689), Expect = 9.800e-69 Identity = 129/228 (56.58%), Postives = 163/228 (71.49%), Query Frame = 0 Query: 105 VLQSLPIMDDGWRQLVTNEANKPYFKRLLAFLTQEATSKQVVYPPYPLVFTALTLCRWTDVRVVIIGQDPYHGPNQAHGLAFSVVGPTPPPPSLNNMFKEAVMDVVGFIKPSHGNLEAWSRQGVLLLNTVLTVRRGQAHSHKGKGWESFTDAVIKELDAKKTGLVFLLWGKPAQEKCKNINRKKHRVIQCAHPSPLSATKTSTPFIGSKSFSRANLLLKELGKAPIDW 333 V+Q +M W L+ E + F+ L FL E K+ +YPP VF AL C ++D++VVI+GQDPYHGP QAHGL+FSV PPPPSL N+FKEA+ D +G +P+HG L WSRQGVLLLNTVLTVRRG+ +SHK +GWE TDA+I +++ + +VFLLWGKPAQEK I+ K+H V++ +HPSPL ATKT+ PF+GSK FSRAN LKE GK PIDW Sbjct: 76 VIQLRSLMHQSWFDLLQKEFARGSFQTLTRFLEGEEGRKKTIYPPPADVFAALRDCAFSDLKVVILGQDPYHGPQQAHGLSFSVRHGVPPPPSLKNIFKEAMND-MGIDRPTHGCLSCWSRQGVLLLNTVLTVRRGEPNSHKKRGWEQLTDAIISKVNKDASNVVFLLWGKPAQEKGALIDSKRHLVVRSSHPSPLGATKTNAPFLGSKCFSRANSYLKEHGKEPIDW 302
BLAST of NO07G03380 vs. NCBI_GenBank
Match: XP_018524161.1 (PREDICTED: uracil-DNA glycosylase isoform X1 [Lates calcarifer]) HSP 1 Score: 270.0 bits (689), Expect = 9.800e-69 Identity = 128/227 (56.39%), Postives = 162/227 (71.37%), Query Frame = 0 Query: 107 QSLPIMDDGWRQLVTNEANKPYFKRLLAFLTQEATSKQVVYPPYPLVFTALTLCRWTDVRVVIIGQDPYHGPNQAHGLAFSVVGPTPPPPSLNNMFKEAVMDVVGFIKPSHGNLEAWSRQGVLLLNTVLTVRRGQAHSHKGKGWESFTDAVIKELDAKKTGLVFLLWGKPAQEKCKNINRKKHRVIQCAHPSPLSATKTSTPFIGSKSFSRANLLLKELGKAPIDWR 334 Q+ P + WR+ ++ E KPYFK+L++F+ +E + VYPP VFT +C DV+VVI+GQDPYHGPNQAHGL FSV P PPPPSL NM+KE + D+ GF P HG+L W++QGVLLLN VLTVR QA+SHK KGWE+FTDAV++ L GLVF+LWG AQ+K INRK+H V+Q HPSPLSA + F G + FS+AN LLK+ GK+PIDW+ Sbjct: 84 QTPPGFGESWRRGLSAEFGKPYFKQLMSFVAEE-RKRHTVYPPAEHVFTWTQMCDIKDVKVVILGQDPYHGPNQAHGLCFSVKRPVPPPPSLENMYKELISDIEGFQHPKHGDLTGWAKQGVLLLNAVLTVRAHQANSHKDKGWETFTDAVVQWLSDNLEGLVFMLWGSYAQKKGAAINRKRHHVLQAVHPSPLSAHR---GFFGCRHFSKANELLKKSGKSPIDWK 306
BLAST of NO07G03380 vs. NCBI_GenBank
Match: XP_018524163.1 (PREDICTED: uracil-DNA glycosylase isoform X2 [Lates calcarifer]) HSP 1 Score: 270.0 bits (689), Expect = 9.800e-69 Identity = 128/227 (56.39%), Postives = 162/227 (71.37%), Query Frame = 0 Query: 107 QSLPIMDDGWRQLVTNEANKPYFKRLLAFLTQEATSKQVVYPPYPLVFTALTLCRWTDVRVVIIGQDPYHGPNQAHGLAFSVVGPTPPPPSLNNMFKEAVMDVVGFIKPSHGNLEAWSRQGVLLLNTVLTVRRGQAHSHKGKGWESFTDAVIKELDAKKTGLVFLLWGKPAQEKCKNINRKKHRVIQCAHPSPLSATKTSTPFIGSKSFSRANLLLKELGKAPIDWR 334 Q+ P + WR+ ++ E KPYFK+L++F+ +E + VYPP VFT +C DV+VVI+GQDPYHGPNQAHGL FSV P PPPPSL NM+KE + D+ GF P HG+L W++QGVLLLN VLTVR QA+SHK KGWE+FTDAV++ L GLVF+LWG AQ+K INRK+H V+Q HPSPLSA + F G + FS+AN LLK+ GK+PIDW+ Sbjct: 76 QTPPGFGESWRRGLSAEFGKPYFKQLMSFVAEE-RKRHTVYPPAEHVFTWTQMCDIKDVKVVILGQDPYHGPNQAHGLCFSVKRPVPPPPSLENMYKELISDIEGFQHPKHGDLTGWAKQGVLLLNAVLTVRAHQANSHKDKGWETFTDAVVQWLSDNLEGLVFMLWGSYAQKKGAAINRKRHHVLQAVHPSPLSAHR---GFFGCRHFSKANELLKKSGKSPIDWK 298
BLAST of NO07G03380 vs. NCBI_GenBank
Match: GBG30008.1 (Uracil-DNA glycosylase [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 270.0 bits (689), Expect = 9.800e-69 Identity = 127/223 (56.95%), Postives = 166/223 (74.44%), Query Frame = 0 Query: 112 MDDGWRQLVTNEANKPYFKRLLAFLTQEATSKQVVYPPYPLVFTALTLCRWTDVRVVIIGQDPYHGPNQAHGLAFSVVGPTPPPPSLNNMFKEAVMDVVGFIKPSHGNLEAWSRQGVLLLNTVLTVRRGQAHSHKGKGWESFTDAVIKELDAKKTGLVFLLWGKPAQEKCKNINRKKHRVIQCAHPSPLSATKTSTPFIGSKSFSRANLLLKELGKAPIDWRL 335 ++ GW+ + EA KPY++ L AFL QEA + + ++PP +VF+AL LC + V+VVI+GQDPYHGP QAHGLAFSV PPSL NM+KEA+ D V KP+ G+L W++QGVLLLNTVLTVR+G+A+SHK +GWE FTDA+I+ L+ K GLVF+LWGK AQ+ ++R KH VI +HPSPL A+KT PFIGSK FSRAN L++ GK PI+W++ Sbjct: 72 LEPGWQAQLGAEARKPYWRSLDAFLRQEAKAGKQIFPPKSMVFSALELCPFDKVKVVILGQDPYHGPGQAHGLAFSVQEGIAIPPSLRNMYKEAMTD-VKISKPTTGSLVPWAKQGVLLLNTVLTVRKGEANSHKDRGWEKFTDAIIRSLNKNKNGLVFMLWGKHAQKVAAPVDRSKHLVITSSHPSPLGASKTKEPFIGSKCFSRANAYLEKKGKEPINWKI 293
BLAST of NO07G03380 vs. NCBI_GenBank
Match: XP_005795056.1 (uracil-DNA glycosylase isoform X2 [Xiphophorus maculatus]) HSP 1 Score: 268.9 bits (686), Expect = 2.200e-68 Identity = 126/227 (55.51%), Postives = 162/227 (71.37%), Query Frame = 0 Query: 107 QSLPIMDDGWRQLVTNEANKPYFKRLLAFLTQEATSKQVVYPPYPLVFTALTLCRWTDVRVVIIGQDPYHGPNQAHGLAFSVVGPTPPPPSLNNMFKEAVMDVVGFIKPSHGNLEAWSRQGVLLLNTVLTVRRGQAHSHKGKGWESFTDAVIKELDAKKTGLVFLLWGKPAQEKCKNINRKKHRVIQCAHPSPLSATKTSTPFIGSKSFSRANLLLKELGKAPIDWR 334 Q+ P D WR+ + E KPYFK+L+ F+ +E + VYPP VFT +C+ TDV+VVI+GQDPYHGP QAHGL FSV P PPPPSL NM+KE D+ GF P HG+L W+RQGVLLLN VLTVR QA+SHK +GWE+FTDAVI+ L + + G++F+LWG AQ+K +INR +H V+Q HPSPLSA + F G + FS+AN LL++ GK+PIDW+ Sbjct: 76 QTPPGFGDSWRKELAAEFGKPYFKQLMQFVAEE-RKRHTVYPPAEQVFTWSKVCKITDVKVVILGQDPYHGPGQAHGLCFSVKRPVPPPPSLENMYKELATDIDGFQHPGHGDLTGWARQGVLLLNAVLTVRAHQANSHKDRGWETFTDAVIQWLSSNQEGVIFMLWGSYAQKKGASINRTRHHVLQTVHPSPLSAHR---GFFGCRHFSKANELLEKCGKSPIDWK 298
BLAST of NO07G03380 vs. NCBI_GenBank
Match: XP_014324249.1 (uracil-DNA glycosylase isoform X1 [Xiphophorus maculatus]) HSP 1 Score: 268.9 bits (686), Expect = 2.200e-68 Identity = 126/227 (55.51%), Postives = 162/227 (71.37%), Query Frame = 0 Query: 107 QSLPIMDDGWRQLVTNEANKPYFKRLLAFLTQEATSKQVVYPPYPLVFTALTLCRWTDVRVVIIGQDPYHGPNQAHGLAFSVVGPTPPPPSLNNMFKEAVMDVVGFIKPSHGNLEAWSRQGVLLLNTVLTVRRGQAHSHKGKGWESFTDAVIKELDAKKTGLVFLLWGKPAQEKCKNINRKKHRVIQCAHPSPLSATKTSTPFIGSKSFSRANLLLKELGKAPIDWR 334 Q+ P D WR+ + E KPYFK+L+ F+ +E + VYPP VFT +C+ TDV+VVI+GQDPYHGP QAHGL FSV P PPPPSL NM+KE D+ GF P HG+L W+RQGVLLLN VLTVR QA+SHK +GWE+FTDAVI+ L + + G++F+LWG AQ+K +INR +H V+Q HPSPLSA + F G + FS+AN LL++ GK+PIDW+ Sbjct: 79 QTPPGFGDSWRKELAAEFGKPYFKQLMQFVAEE-RKRHTVYPPAEQVFTWSKVCKITDVKVVILGQDPYHGPGQAHGLCFSVKRPVPPPPSLENMYKELATDIDGFQHPGHGDLTGWARQGVLLLNAVLTVRAHQANSHKDRGWETFTDAVIQWLSSNQEGVIFMLWGSYAQKKGASINRTRHHVLQTVHPSPLSAHR---GFFGCRHFSKANELLEKCGKSPIDWK 301
BLAST of NO07G03380 vs. NCBI_GenBank
Match: ETI51837.1 (uracil-DNA glycosylase [Phytophthora parasitica P1569] >ETK91726.1 uracil-DNA glycosylase [Phytophthora parasitica] >ETL45139.1 uracil-DNA glycosylase [Phytophthora parasitica] >ETL98313.1 uracil-DNA glycosylase [Phytophthora parasitica] >ETP21619.1 uracil-DNA glycosylase [Phytophthora parasitica CJ01A1]) HSP 1 Score: 267.7 bits (683), Expect = 4.900e-68 Identity = 128/228 (56.14%), Postives = 162/228 (71.05%), Query Frame = 0 Query: 105 VLQSLPIMDDGWRQLVTNEANKPYFKRLLAFLTQEATSKQVVYPPYPLVFTALTLCRWTDVRVVIIGQDPYHGPNQAHGLAFSVVGPTPPPPSLNNMFKEAVMDVVGFIKPSHGNLEAWSRQGVLLLNTVLTVRRGQAHSHKGKGWESFTDAVIKELDAKKTGLVFLLWGKPAQEKCKNINRKKHRVIQCAHPSPLSATKTSTPFIGSKSFSRANLLLKELGKAPIDW 333 V+Q +M W L+ E + F+ L FL E K+ +YPP VF AL C ++D++VVI+GQDPYHGP QAHGL+FSV PPPPSL N+FKEA+ D +G +P+HG L WSRQGVLLLNTVLTVRRG+ +SHK +GWE TDA+I +++ + +VFLLWGKPAQEK I+ K+H V++ +HPSPL A KT+ PF+GSK FSRAN LKE GK PIDW Sbjct: 76 VIQLRSLMHQSWFDLLQKEFARGSFQTLTRFLEGEEGRKKTIYPPPADVFAALRDCAFSDLKVVILGQDPYHGPQQAHGLSFSVRHGVPPPPSLKNIFKEAMND-MGIDRPTHGCLSCWSRQGVLLLNTVLTVRRGEPNSHKKRGWEQLTDAIISKVNKDASNVVFLLWGKPAQEKGALIDSKRHLVVRSSHPSPLGAMKTNAPFLGSKCFSRANSYLKEHGKEPIDW 302
BLAST of NO07G03380 vs. NCBI_GenBank
Match: ETM51453.1 (uracil-DNA glycosylase [Phytophthora parasitica]) HSP 1 Score: 267.7 bits (683), Expect = 4.900e-68 Identity = 128/228 (56.14%), Postives = 162/228 (71.05%), Query Frame = 0 Query: 105 VLQSLPIMDDGWRQLVTNEANKPYFKRLLAFLTQEATSKQVVYPPYPLVFTALTLCRWTDVRVVIIGQDPYHGPNQAHGLAFSVVGPTPPPPSLNNMFKEAVMDVVGFIKPSHGNLEAWSRQGVLLLNTVLTVRRGQAHSHKGKGWESFTDAVIKELDAKKTGLVFLLWGKPAQEKCKNINRKKHRVIQCAHPSPLSATKTSTPFIGSKSFSRANLLLKELGKAPIDW 333 V+Q +M W L+ E + F+ L FL E K+ +YPP VF AL C ++D++VVI+GQDPYHGP QAHGL+FSV PPPPSL N+FKEA+ D +G +P+HG L WSRQGVLLLNTVLTVRRG+ +SHK +GWE TDA+I +++ + +VFLLWGKPAQEK I+ K+H V++ +HPSPL A KT+ PF+GSK FSRAN LKE GK PIDW Sbjct: 76 VIQLRSLMHQSWFDLLQKEFARGSFQTLTRFLEGEEGRKKTIYPPPADVFAALRDCAFSDLKVVILGQDPYHGPQQAHGLSFSVRHGVPPPPSLKNIFKEAMND-MGIDRPTHGCLSCWSRQGVLLLNTVLTVRRGEPNSHKKRGWEQLTDAIISKVNKDASNVVFLLWGKPAQEKGALIDSKRHLVVRSSHPSPLGAMKTNAPFLGSKCFSRANSYLKEHGKEPIDW 302
BLAST of NO07G03380 vs. NCBI_GenBank
Match: ETP49512.1 (uracil-DNA glycosylase [Phytophthora parasitica P10297] >KUF81149.1 Uracil-DNA glycosylase [Phytophthora nicotianae] >KUF98817.1 Amino Acid-Polyamine-Organocation (APC) Family [Phytophthora nicotianae]) HSP 1 Score: 267.7 bits (683), Expect = 4.900e-68 Identity = 128/228 (56.14%), Postives = 162/228 (71.05%), Query Frame = 0 Query: 105 VLQSLPIMDDGWRQLVTNEANKPYFKRLLAFLTQEATSKQVVYPPYPLVFTALTLCRWTDVRVVIIGQDPYHGPNQAHGLAFSVVGPTPPPPSLNNMFKEAVMDVVGFIKPSHGNLEAWSRQGVLLLNTVLTVRRGQAHSHKGKGWESFTDAVIKELDAKKTGLVFLLWGKPAQEKCKNINRKKHRVIQCAHPSPLSATKTSTPFIGSKSFSRANLLLKELGKAPIDW 333 V+Q +M W L+ E + F+ L FL E K+ +YPP VF AL C ++D++VVI+GQDPYHGP QAHGL+FSV PPPPSL N+FKEA+ D +G +P+HG L WSRQGVLLLNTVLTVRRG+ +SHK +GWE TDA+I +++ + +VFLLWGKPAQEK I+ K+H V++ +HPSPL A KT+ PF+GSK FSRAN LKE GK PIDW Sbjct: 76 VIQLRSLMHQSWFDLLQKEFARGSFQTLTRFLEGEEGRKKTIYPPPADVFAALRDCAFSDLKVVILGQDPYHGPQQAHGLSFSVRHGVPPPPSLKNIFKEAMND-MGIDRPTHGCLSCWSRQGVLLLNTVLTVRRGEPNSHKKRGWEQLTDAIISKVNKDASNVVFLLWGKPAQEKGALIDSKRHLVVRSSHPSPLGAMKTNAPFLGSKCFSRANSYLKEHGKEPIDW 302
BLAST of NO07G03380 vs. NCBI_GenBank
Match: XP_007559211.1 (PREDICTED: uracil-DNA glycosylase isoform X1 [Poecilia formosa]) HSP 1 Score: 267.7 bits (683), Expect = 4.900e-68 Identity = 126/227 (55.51%), Postives = 162/227 (71.37%), Query Frame = 0 Query: 107 QSLPIMDDGWRQLVTNEANKPYFKRLLAFLTQEATSKQVVYPPYPLVFTALTLCRWTDVRVVIIGQDPYHGPNQAHGLAFSVVGPTPPPPSLNNMFKEAVMDVVGFIKPSHGNLEAWSRQGVLLLNTVLTVRRGQAHSHKGKGWESFTDAVIKELDAKKTGLVFLLWGKPAQEKCKNINRKKHRVIQCAHPSPLSATKTSTPFIGSKSFSRANLLLKELGKAPIDWR 334 Q+ P + WR+ + E KPYFK+L+ F+++E + VYPP VFT +C TDV+VVI+GQDPYHGP QAHGL FSV P PPPPSL NM+KE D+ GF P HG+L W+RQGVLLLN VLTVR A+SHK +GWE+FTDAVI+ L + + G+VF+LWG AQ+K +INRK+H V+Q HPSPLSA + F G + FS+AN LL++ GK+PIDW+ Sbjct: 79 QTPPGFGESWRKELAAEFRKPYFKQLMQFVSEE-RKRHTVYPPAEQVFTWSEVCHITDVKVVILGQDPYHGPGQAHGLCFSVKRPVPPPPSLENMYKELATDIDGFQHPGHGDLTGWARQGVLLLNAVLTVRAHHANSHKDRGWETFTDAVIQWLSSNQEGVVFMLWGSYAQKKGASINRKRHHVLQTVHPSPLSAHR---GFFGCRHFSKANELLEKCGKSPIDWK 301 The following BLAST results are available for this feature:
BLAST of NO07G03380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G03380 ID=NO07G03380|Name=NO07G03380|organism=Nannochloropsis oceanica|type=gene|length=1186bpback to top protein sequence of NO07G03380.1 >NO07G03380.1-protein ID=NO07G03380.1-protein|Name=NO07G03380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=335bpback to top Synonyms
Publications
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