NO07G03380, NO07G03380 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO07G03380
Unique Name	NO07G03380
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	1186
Alignment location	chr7:928397..929582 +

Link to JBrowse

Properties


Property Name	Value
Description	Uracil-DNA glycosylase

Mutants

Expression

Analysis:

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr7	genome	chr7:928397..929582 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006281	DNA repair
GO:0006284	base-excision repair

Vocabulary: **Molecular Function**
Term	Definition
GO:0004844	uracil DNA N-glycosylase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036895	Uracil-DNA_glycosylase-like_sf
IPR002043	Ura_DNA_glycsylse
IPR005122	Uracil-DNA_glycosylase-like

Homology

[Close]

BLAST of NO07G03380 vs. NCBI_GenBank
Match: XP_005854086.1 (uracil-DNA glycosylase [Nannochloropsis gaditana CCMP526] >EKU22271.1 uracil-DNA glycosylase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 419.5 bits (1077), Expect = 1.000e-113
Identity = 196/236 (83.05%), Postives = 211/236 (89.41%), Query Frame = 0

Query:   99 SLVPHPVLQSLPIMDDGWRQLVTNEANKPYFKRLLAFLTQEATSKQVVYPPYPLVFTALTLCRWTDVRVVIIGQDPYHGPNQAHGLAFSVVGPTPPPPSLNNMFKEAVMDVVGFIKPSHGNLEAWSRQGVLLLNTVLTVRRGQAHSHKGKGWESFTDAVIKELDAKKTGLVFLLWGKPAQEKCKNINRKKHRVIQCAHPSPLSATKTSTPFIGSKSFSRANLLLKELGKAPIDWRL 335
            +L  HPVLQSL  MDDGWR  V ++A KPYF RLLAFL+QE +S+QVVYPPYPLVF+ALTLCRW DVRVVIIGQDPYHGPNQAHGLAFSV+ PT PPPSLNNMFKEA+ DV GF KPSHGNLEAWSRQGVLLLNTVLTVRRGQA+SHKGKGWE+FTDAVIKELD KK GLVF+LWGKPAQEKCK+INR KHRVI+CAHPSPLSATKT+ PFIGSKSFSR N  L ELGK PIDWRL
Sbjct:  358 ALTAHPVLQSLDAMDDGWRHFVVSQAGKPYFSRLLAFLSQEISSRQVVYPPYPLVFSALTLCRWLDVRVVIIGQDPYHGPNQAHGLAFSVLPPTQPPPSLNNMFKEAMEDVSGFTKPSHGNLEAWSRQGVLLLNTVLTVRRGQANSHKGKGWETFTDAVIKELDVKKKGLVFVLWGKPAQEKCKSINRAKHRVIRCAHPSPLSATKTNAPFIGSKSFSRTNAALVELGKEPIDWRL 593

[Close]

BLAST of NO07G03380 vs. NCBI_GenBank
Match: EWM27040.1 (uracil-dna glycosylase [Nannochloropsis gaditana])

HSP 1 Score: 418.7 bits (1075), Expect = 1.700e-113
Identity = 217/336 (64.58%), Postives = 237/336 (70.54%), Query Frame = 0

Query:    1 MTQPKLSAFFTSSSSTKSTPDPA--ALSGAGAPKRALDSSGGGVEGDCGTPAVQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLVPHPVLQSLPIMDDGWRQLVTNEANKPYFKRLLAFLTQEATSKQVVYPPYPLVFTALTLCRWTDVRVVIIGQDPYHGPNQAHGLAFSVVGPTPPPPSLNNMFKEAVMDVVGFIKPSHGNLEAWSRQGVLLLNTVLTVRRGQAHSHKGKGWESFTDAVIKELDAKKTGLVFLLWGKPAQEKCKNINRKKHRVIQCAHPSPLSATKTSTPFIGSKSFSRANLLLKELGKAPIDWRL 335
            MTQ KLSAFF SSS  K+ P       S +   KR LD     ++ + GT                                                  +L  HPVLQSL  MDDGWR  V ++A KPYF RLLAFL+QE +S+QVVYPPYPLVF+ALTLCRW DVRVVIIGQDPYHGPNQAHGLAFSV+ PT PPPSLNNMFKEA+ DV GF KPSHGNLEAWSRQGVLLLNTVLTVRRGQA+SHKGKGWE+FTDAVIKELD KK GLVF+LWGKPAQEKCK+INR KHRVI+CAHPSPLSATKT+ PFIGSKSFSR N  L ELGK PIDWRL
Sbjct:    1 MTQSKLSAFFRSSSHKKTAPKTGEDCSSESRLEKRVLDD----IDDNSGTLEKHDVVAVVQPPEKKTACGKKIEVTAASLAFAAPLKSSPTPSPSPCLPPALTAHPVLQSLDAMDDGWRHFVVSQAGKPYFSRLLAFLSQEISSRQVVYPPYPLVFSALTLCRWLDVRVVIIGQDPYHGPNQAHGLAFSVLPPTQPPPSLNNMFKEAMEDVSGFTKPSHGNLEAWSRQGVLLLNTVLTVRRGQANSHKGKGWETFTDAVIKELDVKKKGLVFVLWGKPAQEKCKSINRAKHRVIRCAHPSPLSATKTNAPFIGSKSFSRTNAALVELGKEPIDWRL 332

[Close]

BLAST of NO07G03380 vs. NCBI_GenBank
Match: GAY03989.1 (uracil-DNA glycosyllase [Pythium insidiosum])

HSP 1 Score: 274.2 bits (700), Expect = 5.200e-70
Identity = 129/224 (57.59%), Postives = 162/224 (72.32%), Query Frame = 0

Query:  111 IMDDGWRQLVTNEANKPYFKRLLAFLTQEATSKQVVYPPYPLVFTALTLCRWTDVRVVIIGQDPYHGPNQAHGLAFSVVGPTPPPPSLNNMFKEAVMDVVGFIKPSHGNLEAWSRQGVLLLNTVLTVRRGQAHSHKGKGWESFTDAVIKELDAKKTGLVFLLWGKPAQEKCKNINRKKHRVIQCAHPSPLSATKTSTPFIGSKSFSRANLLLKELGKAPIDWRL 335
            +M + W   + +E  +PYFK L+ FLT E   K+ +YP    VF AL  C +  ++VVI+GQDPYHGPNQAHGL+FSV+    PPPSL N++KEA+ D VG  KP+HG L  WS+QGVL+LNTVLTVRRG+ +SHKG+GWE  TDAVI  ++     +VFLLWGKPAQ K   IN  KH +I+ +HPSPL ATKT+ PFIGSK FSRAN  L++ GK PIDWR+
Sbjct:   99 LMHESWHAQLADEFKRPYFKSLVQFLTTEENKKKTLYPSPENVFAALRDCAFDSLKVVILGQDPYHGPNQAHGLSFSVLPGIQPPPSLVNIYKEAMSD-VGISKPTHGCLSCWSKQGVLMLNTVLTVRRGEPNSHKGQGWEKLTDAVIMRINKHAENVVFLLWGKPAQTKGAIINSSKHLIIKSSHPSPLGATKTNEPFIGSKCFSRANAYLEKHGKDPIDWRV 321

[Close]

BLAST of NO07G03380 vs. NCBI_GenBank
Match: OWZ06681.1 (Uracil-DNA glycosylase [Phytophthora megakarya])

HSP 1 Score: 271.9 bits (694), Expect = 2.600e-69
Identity = 131/227 (57.71%), Postives = 162/227 (71.37%), Query Frame = 0

Query:  106 LQSLPIMDDGWRQLVTNEANKPYFKRLLAFLTQEATSKQVVYPPYPLVFTALTLCRWTDVRVVIIGQDPYHGPNQAHGLAFSVVGPTPPPPSLNNMFKEAVMDVVGFIKPSHGNLEAWSRQGVLLLNTVLTVRRGQAHSHKGKGWESFTDAVIKELDAKKTGLVFLLWGKPAQEKCKNINRKKHRVIQCAHPSPLSATKTSTPFIGSKSFSRANLLLKELGKAPIDW 333
            +Q   +M   W  L+  E  +  F+ L  FL  E   K+ VYPP   VF AL  C ++D++VVI+GQDPYHGP QAHGL+FSV    PPPPSL N+FKEA+ D V   +P+HG L  WSRQGVL+LNTVLTVRRG+A+SHK +GWE FTDAVI  ++   + +VFLLWGKPAQEK   I+ K+H V++ +HPSPL ATKT+ PF+GSK FSRAN  LKE GK PIDW
Sbjct:   80 VQLCSLMHQSWFDLLQKEFTRGSFQALTRFLEGEEGRKKTVYPPPADVFAALRDCAFSDLKVVILGQDPYHGPEQAHGLSFSVRHGVPPPPSLKNIFKEAMND-VAITRPTHGCLSCWSRQGVLMLNTVLTVRRGEANSHKKRGWEQFTDAVIANVNKHASNVVFLLWGKPAQEKGALIDSKRHLVVRSSHPSPLGATKTNAPFLGSKCFSRANSYLKEHGKEPIDW 305

[Close]

BLAST of NO07G03380 vs. NCBI_GenBank
Match: OQR91428.1 (uracil-DNA glycosylase [Achlya hypogyna])

HSP 1 Score: 271.6 bits (693), Expect = 3.400e-69
Identity = 127/217 (58.53%), Postives = 160/217 (73.73%), Query Frame = 0

Query:  116 WRQLVTNEANKPYFKRLLAFLTQEATSKQVVYPPYPLVFTALTLCRWTDVRVVIIGQDPYHGPNQAHGLAFSVVGPTPPPPSLNNMFKEAVMDVVGFIKPSHGNLEAWSRQGVLLLNTVLTVRRGQAHSHKGKGWESFTDAVIKELDAKKTGLVFLLWGKPAQEKCKNINRKKHRVIQCAHPSPLSATKTSTPFIGSKSFSRANLLLKELGKAPIDW 333
            WR+++  E  K YFK+L AFL +E   K  +YPP   +FTAL LC +  V+VVI+GQDPYHGP QAHGL FSV  P PPPPSL N++KEA+ D V   KP+HG L +W  QGVLLLNTVLTVR  +A+SHK +GWE+FTD VI+++  + +G+VFLLWGKPAQEK   I+R KH ++  +HPSPL ATKTS PFIGS+ FS+ N  L + GK PI+W
Sbjct:   60 WREILALEFKKSYFKQLDAFLVREQAKKAKIYPPKQEIFTALNLCPFDQVKVVILGQDPYHGPGQAHGLCFSVQKPVPPPPSLKNIYKEAMAD-VEIAKPTHGCLLSWCHQGVLLLNTVLTVRATEANSHKKQGWENFTDVVIRKISQELSGVVFLLWGKPAQEKIVLIDRTKHCILTSSHPSPLGATKTSEPFIGSRCFSKTNAYLVKQGKEPINW 275

[Close]

BLAST of NO07G03380 vs. NCBI_GenBank
Match: GAX95942.1 (uracil-DNA glycosyllase [Pythium insidiosum])

HSP 1 Score: 271.6 bits (693), Expect = 3.400e-69
Identity = 128/224 (57.14%), Postives = 161/224 (71.88%), Query Frame = 0

Query:  111 IMDDGWRQLVTNEANKPYFKRLLAFLTQEATSKQVVYPPYPLVFTALTLCRWTDVRVVIIGQDPYHGPNQAHGLAFSVVGPTPPPPSLNNMFKEAVMDVVGFIKPSHGNLEAWSRQGVLLLNTVLTVRRGQAHSHKGKGWESFTDAVIKELDAKKTGLVFLLWGKPAQEKCKNINRKKHRVIQCAHPSPLSATKTSTPFIGSKSFSRANLLLKELGKAPIDWRL 335
            +M + W   + +E  +PYFK L+ FLT E   K+ +YP    VF AL  C +  ++VVI+GQDPYHGPNQAHGL+FSV+    PPPSL N++KEA+ D VG  KP+HG L  WS+QGVL+LNTVLTVRRG+ +SHKG+GWE  TDAVI  ++     +VFLLWGKPAQ K   IN  KH +I+ +HPSPL ATKT+ PFIGSK FSRA   L++ GK PIDWR+
Sbjct:   99 LMHESWHAQLADEFKRPYFKSLVQFLTTEENKKKTLYPSPENVFAALRDCAFDSLKVVILGQDPYHGPNQAHGLSFSVLPGIQPPPSLVNIYKEAMSD-VGISKPTHGCLSCWSKQGVLMLNTVLTVRRGEPNSHKGQGWEKLTDAVIMRINKHAENVVFLLWGKPAQTKGAIINSSKHLIIKSSHPSPLGATKTNEPFIGSKCFSRAXAYLEKHGKDPIDWRV 321

[Close]

BLAST of NO07G03380 vs. NCBI_GenBank
Match: XP_008613363.1 (uracil-DNA glycosylase [Saprolegnia diclina VS20] >EQC33240.1 uracil-DNA glycosylase [Saprolegnia diclina VS20])

HSP 1 Score: 271.2 bits (692), Expect = 4.400e-69
Identity = 124/217 (57.14%), Postives = 160/217 (73.73%), Query Frame = 0

Query:  116 WRQLVTNEANKPYFKRLLAFLTQEATSKQVVYPPYPLVFTALTLCRWTDVRVVIIGQDPYHGPNQAHGLAFSVVGPTPPPPSLNNMFKEAVMDVVGFIKPSHGNLEAWSRQGVLLLNTVLTVRRGQAHSHKGKGWESFTDAVIKELDAKKTGLVFLLWGKPAQEKCKNINRKKHRVIQCAHPSPLSATKTSTPFIGSKSFSRANLLLKELGKAPIDW 333
            WR+++  E  K YFK L AFL +E   K +++PP   +FTAL LC +  ++VVI+GQDPYHGP QAHGL FSV  P PPPPSL N++KEA+ D V   KPSHG L +W  QGVLLLNTVLTVR  +A+SHK +GWE+FTD +++++  + +G+VFLLWGKPAQEK   I+R KH ++  +HPSPL ATKT+ PFIGS+ FS+ N  L + GK PIDW
Sbjct:   69 WREMLAPEFKKSYFKSLDAFLVREQQKKAMIFPPKSEIFTALNLCPFDKIKVVILGQDPYHGPGQAHGLCFSVQKPVPPPPSLKNIYKEAIAD-VNIPKPSHGCLLSWCDQGVLLLNTVLTVRATEANSHKKQGWETFTDVIMRKISKETSGVVFLLWGKPAQEKSALIDRSKHCILTSSHPSPLGATKTAEPFIGSRCFSKTNAYLVQQGKDPIDW 284

[Close]

BLAST of NO07G03380 vs. NCBI_GenBank
Match: OQS07442.1 (uracil-DNA glycosylase [Thraustotheca clavata])

HSP 1 Score: 270.8 bits (691), Expect = 5.700e-69
Identity = 125/217 (57.60%), Postives = 155/217 (71.43%), Query Frame = 0

Query:  116 WRQLVTNEANKPYFKRLLAFLTQEATSKQVVYPPYPLVFTALTLCRWTDVRVVIIGQDPYHGPNQAHGLAFSVVGPTPPPPSLNNMFKEAVMDVVGFIKPSHGNLEAWSRQGVLLLNTVLTVRRGQAHSHKGKGWESFTDAVIKELDAKKTGLVFLLWGKPAQEKCKNINRKKHRVIQCAHPSPLSATKTSTPFIGSKSFSRANLLLKELGKAPIDW 333
            WR+++  E  K YFK L  FL QE   K  +YPP   +FTAL LC +  V+VVI+GQDPYHGP QAHGL FSV  P PPPPSL N++KEA+ D V   KPSHG L +W  QGVL+LNTVLTVR  + +SHK +GWE+FTD +I+++     G+VFLLWGKPAQEK   I+R KH++   +HPSPL ATKT+ PFIGS+ FS+ N  L + GK PIDW
Sbjct:   55 WREVLAQEFKKSYFKNLDTFLVQEQKKKAKIYPPKDEIFTALNLCPFDKVKVVILGQDPYHGPGQAHGLCFSVQKPVPPPPSLRNIYKEAMSD-VKIPKPSHGCLLSWCHQGVLMLNTVLTVRAAEPNSHKKQGWENFTDVIIRKISQDSEGVVFLLWGKPAQEKIPLIDRSKHKIFTSSHPSPLGATKTAEPFIGSRCFSKTNEYLVQQGKEPIDW 270

[Close]

BLAST of NO07G03380 vs. NCBI_GenBank
Match: XP_009532122.1 (hypothetical protein PHYSODRAFT_347255 [Phytophthora sojae] >EGZ11789.1 hypothetical protein PHYSODRAFT_347255 [Phytophthora sojae])

HSP 1 Score: 270.0 bits (689), Expect = 9.800e-69
Identity = 128/217 (58.99%), Postives = 161/217 (74.19%), Query Frame = 0

Query:  116 WRQLVTNEANKPYFKRLLAFLTQEATSKQVVYPPYPLVFTALTLCRWTDVRVVIIGQDPYHGPNQAHGLAFSVVGPTPPPPSLNNMFKEAVMDVVGFIKPSHGNLEAWSRQGVLLLNTVLTVRRGQAHSHKGKGWESFTDAVIKELDAKKTGLVFLLWGKPAQEKCKNINRKKHRVIQCAHPSPLSATKTSTPFIGSKSFSRANLLLKELGKAPIDW 333
            W  ++  E ++  F+ L  FL  E   K+ +YPP   VF AL  C ++D++VVI+GQDPYHGP QAHGL+FSV    PPPPSL N+FKEA+ D VG  +P+HG L  WS+QGVLLLNTVLTVRRG+A+SHK +GWE FTDAVI ++  + + +VFLLWGKPAQEK   I+ K+H V++ +HPSPL ATKT+ PF+GSK FSRAN  LKE GK PIDW
Sbjct:  249 WFDVLQKEFSRGSFQALTRFLEGEEGRKKTIYPPPADVFAALRDCAFSDLKVVILGQDPYHGPQQAHGLSFSVRHGIPPPPSLKNIFKEAMND-VGIARPTHGCLSCWSKQGVLLLNTVLTVRRGEANSHKKRGWEQFTDAVISKVSKEASNVVFLLWGKPAQEKGALIDTKRHLVVRSSHPSPLGATKTNAPFLGSKCFSRANSYLKEHGKEPIDW 464

[Close]

BLAST of NO07G03380 vs. NCBI_GenBank
Match: XP_008902215.1 (uracil-DNA glycosylase [Phytophthora parasitica INRA-310] >ETN12221.1 uracil-DNA glycosylase [Phytophthora parasitica INRA-310])

HSP 1 Score: 270.0 bits (689), Expect = 9.800e-69
Identity = 129/228 (56.58%), Postives = 163/228 (71.49%), Query Frame = 0

Query:  105 VLQSLPIMDDGWRQLVTNEANKPYFKRLLAFLTQEATSKQVVYPPYPLVFTALTLCRWTDVRVVIIGQDPYHGPNQAHGLAFSVVGPTPPPPSLNNMFKEAVMDVVGFIKPSHGNLEAWSRQGVLLLNTVLTVRRGQAHSHKGKGWESFTDAVIKELDAKKTGLVFLLWGKPAQEKCKNINRKKHRVIQCAHPSPLSATKTSTPFIGSKSFSRANLLLKELGKAPIDW 333
            V+Q   +M   W  L+  E  +  F+ L  FL  E   K+ +YPP   VF AL  C ++D++VVI+GQDPYHGP QAHGL+FSV    PPPPSL N+FKEA+ D +G  +P+HG L  WSRQGVLLLNTVLTVRRG+ +SHK +GWE  TDA+I +++   + +VFLLWGKPAQEK   I+ K+H V++ +HPSPL ATKT+ PF+GSK FSRAN  LKE GK PIDW
Sbjct:   76 VIQLRSLMHQSWFDLLQKEFARGSFQTLTRFLEGEEGRKKTIYPPPADVFAALRDCAFSDLKVVILGQDPYHGPQQAHGLSFSVRHGVPPPPSLKNIFKEAMND-MGIDRPTHGCLSCWSRQGVLLLNTVLTVRRGEPNSHKKRGWEQLTDAIISKVNKDASNVVFLLWGKPAQEKGALIDSKRHLVVRSSHPSPLGATKTNAPFLGSKCFSRANSYLKEHGKEPIDW 302

The following BLAST results are available for this feature:

BLAST of NO07G03380 vs. NCBI_GenBank

BLAST of NO07G03380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
XP_005854086.1	1.000e-113	83.05	uracil-DNA glycosylase [Nannochloropsis gaditana C...	[more]
EWM27040.1	1.700e-113	64.58	uracil-dna glycosylase [Nannochloropsis gaditana]	[more]
GAY03989.1	5.200e-70	57.59	uracil-DNA glycosyllase [Pythium insidiosum]	[more]
OWZ06681.1	2.600e-69	57.71	Uracil-DNA glycosylase [Phytophthora megakarya]	[more]
OQR91428.1	3.400e-69	58.53	uracil-DNA glycosylase [Achlya hypogyna]	[more]
GAX95942.1	3.400e-69	57.14	uracil-DNA glycosyllase [Pythium insidiosum]	[more]
XP_008613363.1	4.400e-69	57.14	uracil-DNA glycosylase [Saprolegnia diclina VS20] ...	[more]
OQS07442.1	5.700e-69	57.60	uracil-DNA glycosylase [Thraustotheca clavata]	[more]
XP_009532122.1	9.800e-69	58.99	hypothetical protein PHYSODRAFT_347255 [Phytophtho...	[more]
XP_008902215.1	9.800e-69	56.58	uracil-DNA glycosylase [Phytophthora parasitica IN...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL100	nonsL100	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR072	ncniR072	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR071	ncniR071	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR130	ngnoR130	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK000518	NSK000518	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO07G03380.1	NO07G03380.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|581133	gene_2672	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100056g6	gene3515	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO07G03380.1	NO07G03380.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO07G03380 ID=NO07G03380|Name=NO07G03380|organism=Nannochloropsis oceanica|type=gene|length=1186bp
ATGACGCAGCCCAAGCTCTCTGCGTTCTTTACCTCGTCGTCAAGCACTAA
AAGCACGCCGGATCCCGCAGCACTATCTGGGGCTGGAGCACCGAAGCGTG
CCCTTGACAGCAGCGGAGGCGGGGTCGAAGGCGACTGTGGGACACCGGCT
GTGCAGGCGCCAGCAGCCAAAAAGGTGGCGGTCGAAAAGAGTACCATGAG
CACTGCCTCTTCATTTTCCTCCTTTTCTCGATCCCCCTTTTCCTCGGCGT
CTTCCTCGTCCGCCTCCGCCTCCACCCCCTCCTTCCTCTCCTCTAGCCTC
GTACCCCACCCTGTTCTCCAGTCCCTCCCCATCATGGACGACGGCTGGCG
GCAATTGGTGACAAACGAAGCCAACAAACCCTACTTCAAACGTCTACTTG
CCTTTCTTACTCAAGAAGCCACGAGCAAGCAAGTCGTCTACCCGCCCTAC
CCATTGGTATTTACCGCCCTCACCCTCTGTAGGTGGACAGACGTCCGCGT
CGTTATCATCGGCCAAGACCCTTACCATGGGCCCAATCAAGCCCATGGAC
TCGCCTTCTCCGTTGTAGGCCCCACCCCTCCCCCTCCCAGTCTTAACAAT
ATGTTTAAAGAAGCAGTTATGGACGTGGTTGGATTCATTAAGCCCTCTCA
TGGCAACTTGGAGGCGTGGAGCCGCCAGGGTGTTTTACTGCTGAACACTG
TTTTGACTGTACGAAGGGGACAGGCACATTCGCATAAAGGCAAGGGATGG
GAGAGCTTCACGGACGCGGTGATCAAGGAACTGGATGCGAAGAAGACAGG
TTTGGTGTTCTTGTTGTGGGGTAAGCCAGCGCAGgtatgttttggggtgt
aagggctagagcttgggtattgtaggaggatttaatgtgctgtacgcttc
caaggctgttgggtttgaaacgacgatggtttgtgttttcttcattttct
ggggtgtatcgccatgattcaaatcttttcattttctctctttctcccct
ccctcccttctgcagGAGAAATGCAAAAACATCAACCGGAAGAAGCATCG
CGTTATCCAGTGCGCCCATCCATCTCCTCTCTCGGCCACCAAGACTAGCA
CGCCTTTTATTGGTTCCAAAAGTTTTTCGCGAGCAAATTTGCTGTTGAAA
GAGCTGGGGAAGGCGCCGATTGACTGGCGATTGTAG

protein sequence of NO07G03380.1

>NO07G03380.1-protein ID=NO07G03380.1-protein|Name=NO07G03380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=335bp
MTQPKLSAFFTSSSSTKSTPDPAALSGAGAPKRALDSSGGGVEGDCGTPA
VQAPAAKKVAVEKSTMSTASSFSSFSRSPFSSASSSSASASTPSFLSSSL
VPHPVLQSLPIMDDGWRQLVTNEANKPYFKRLLAFLTQEATSKQVVYPPY
PLVFTALTLCRWTDVRVVIIGQDPYHGPNQAHGLAFSVVGPTPPPPSLNN
MFKEAVMDVVGFIKPSHGNLEAWSRQGVLLLNTVLTVRRGQAHSHKGKGW
ESFTDAVIKELDAKKTGLVFLLWGKPAQEKCKNINRKKHRVIQCAHPSPL
SATKTSTPFIGSKSFSRANLLLKELGKAPIDWRL*

Synonyms

Publications