NO07G03380, NO07G03380 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G03380 vs. NCBI_GenBank
Match: XP_005854086.1 (uracil-DNA glycosylase [Nannochloropsis gaditana CCMP526] >EKU22271.1 uracil-DNA glycosylase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 419.5 bits (1077), Expect = 1.000e-113 Identity = 196/236 (83.05%), Postives = 211/236 (89.41%), Query Frame = 0 Query: 99 SLVPHPVLQSLPIMDDGWRQLVTNEANKPYFKRLLAFLTQEATSKQVVYPPYPLVFTALTLCRWTDVRVVIIGQDPYHGPNQAHGLAFSVVGPTPPPPSLNNMFKEAVMDVVGFIKPSHGNLEAWSRQGVLLLNTVLTVRRGQAHSHKGKGWESFTDAVIKELDAKKTGLVFLLWGKPAQEKCKNINRKKHRVIQCAHPSPLSATKTSTPFIGSKSFSRANLLLKELGKAPIDWRL 335 +L HPVLQSL MDDGWR V ++A KPYF RLLAFL+QE +S+QVVYPPYPLVF+ALTLCRW DVRVVIIGQDPYHGPNQAHGLAFSV+ PT PPPSLNNMFKEA+ DV GF KPSHGNLEAWSRQGVLLLNTVLTVRRGQA+SHKGKGWE+FTDAVIKELD KK GLVF+LWGKPAQEKCK+INR KHRVI+CAHPSPLSATKT+ PFIGSKSFSR N L ELGK PIDWRL Sbjct: 358 ALTAHPVLQSLDAMDDGWRHFVVSQAGKPYFSRLLAFLSQEISSRQVVYPPYPLVFSALTLCRWLDVRVVIIGQDPYHGPNQAHGLAFSVLPPTQPPPSLNNMFKEAMEDVSGFTKPSHGNLEAWSRQGVLLLNTVLTVRRGQANSHKGKGWETFTDAVIKELDVKKKGLVFVLWGKPAQEKCKSINRAKHRVIRCAHPSPLSATKTNAPFIGSKSFSRTNAALVELGKEPIDWRL 593
BLAST of NO07G03380 vs. NCBI_GenBank
Match: EWM27040.1 (uracil-dna glycosylase [Nannochloropsis gaditana]) HSP 1 Score: 418.7 bits (1075), Expect = 1.700e-113 Identity = 217/336 (64.58%), Postives = 237/336 (70.54%), Query Frame = 0 Query: 1 MTQPKLSAFFTSSSSTKSTPDPA--ALSGAGAPKRALDSSGGGVEGDCGTPAVQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLVPHPVLQSLPIMDDGWRQLVTNEANKPYFKRLLAFLTQEATSKQVVYPPYPLVFTALTLCRWTDVRVVIIGQDPYHGPNQAHGLAFSVVGPTPPPPSLNNMFKEAVMDVVGFIKPSHGNLEAWSRQGVLLLNTVLTVRRGQAHSHKGKGWESFTDAVIKELDAKKTGLVFLLWGKPAQEKCKNINRKKHRVIQCAHPSPLSATKTSTPFIGSKSFSRANLLLKELGKAPIDWRL 335 MTQ KLSAFF SSS K+ P S + KR LD ++ + GT +L HPVLQSL MDDGWR V ++A KPYF RLLAFL+QE +S+QVVYPPYPLVF+ALTLCRW DVRVVIIGQDPYHGPNQAHGLAFSV+ PT PPPSLNNMFKEA+ DV GF KPSHGNLEAWSRQGVLLLNTVLTVRRGQA+SHKGKGWE+FTDAVIKELD KK GLVF+LWGKPAQEKCK+INR KHRVI+CAHPSPLSATKT+ PFIGSKSFSR N L ELGK PIDWRL Sbjct: 1 MTQSKLSAFFRSSSHKKTAPKTGEDCSSESRLEKRVLDD----IDDNSGTLEKHDVVAVVQPPEKKTACGKKIEVTAASLAFAAPLKSSPTPSPSPCLPPALTAHPVLQSLDAMDDGWRHFVVSQAGKPYFSRLLAFLSQEISSRQVVYPPYPLVFSALTLCRWLDVRVVIIGQDPYHGPNQAHGLAFSVLPPTQPPPSLNNMFKEAMEDVSGFTKPSHGNLEAWSRQGVLLLNTVLTVRRGQANSHKGKGWETFTDAVIKELDVKKKGLVFVLWGKPAQEKCKSINRAKHRVIRCAHPSPLSATKTNAPFIGSKSFSRTNAALVELGKEPIDWRL 332
BLAST of NO07G03380 vs. NCBI_GenBank
Match: GAY03989.1 (uracil-DNA glycosyllase [Pythium insidiosum]) HSP 1 Score: 274.2 bits (700), Expect = 5.200e-70 Identity = 129/224 (57.59%), Postives = 162/224 (72.32%), Query Frame = 0 Query: 111 IMDDGWRQLVTNEANKPYFKRLLAFLTQEATSKQVVYPPYPLVFTALTLCRWTDVRVVIIGQDPYHGPNQAHGLAFSVVGPTPPPPSLNNMFKEAVMDVVGFIKPSHGNLEAWSRQGVLLLNTVLTVRRGQAHSHKGKGWESFTDAVIKELDAKKTGLVFLLWGKPAQEKCKNINRKKHRVIQCAHPSPLSATKTSTPFIGSKSFSRANLLLKELGKAPIDWRL 335 +M + W + +E +PYFK L+ FLT E K+ +YP VF AL C + ++VVI+GQDPYHGPNQAHGL+FSV+ PPPSL N++KEA+ D VG KP+HG L WS+QGVL+LNTVLTVRRG+ +SHKG+GWE TDAVI ++ +VFLLWGKPAQ K IN KH +I+ +HPSPL ATKT+ PFIGSK FSRAN L++ GK PIDWR+ Sbjct: 99 LMHESWHAQLADEFKRPYFKSLVQFLTTEENKKKTLYPSPENVFAALRDCAFDSLKVVILGQDPYHGPNQAHGLSFSVLPGIQPPPSLVNIYKEAMSD-VGISKPTHGCLSCWSKQGVLMLNTVLTVRRGEPNSHKGQGWEKLTDAVIMRINKHAENVVFLLWGKPAQTKGAIINSSKHLIIKSSHPSPLGATKTNEPFIGSKCFSRANAYLEKHGKDPIDWRV 321
BLAST of NO07G03380 vs. NCBI_GenBank
Match: OWZ06681.1 (Uracil-DNA glycosylase [Phytophthora megakarya]) HSP 1 Score: 271.9 bits (694), Expect = 2.600e-69 Identity = 131/227 (57.71%), Postives = 162/227 (71.37%), Query Frame = 0 Query: 106 LQSLPIMDDGWRQLVTNEANKPYFKRLLAFLTQEATSKQVVYPPYPLVFTALTLCRWTDVRVVIIGQDPYHGPNQAHGLAFSVVGPTPPPPSLNNMFKEAVMDVVGFIKPSHGNLEAWSRQGVLLLNTVLTVRRGQAHSHKGKGWESFTDAVIKELDAKKTGLVFLLWGKPAQEKCKNINRKKHRVIQCAHPSPLSATKTSTPFIGSKSFSRANLLLKELGKAPIDW 333 +Q +M W L+ E + F+ L FL E K+ VYPP VF AL C ++D++VVI+GQDPYHGP QAHGL+FSV PPPPSL N+FKEA+ D V +P+HG L WSRQGVL+LNTVLTVRRG+A+SHK +GWE FTDAVI ++ + +VFLLWGKPAQEK I+ K+H V++ +HPSPL ATKT+ PF+GSK FSRAN LKE GK PIDW Sbjct: 80 VQLCSLMHQSWFDLLQKEFTRGSFQALTRFLEGEEGRKKTVYPPPADVFAALRDCAFSDLKVVILGQDPYHGPEQAHGLSFSVRHGVPPPPSLKNIFKEAMND-VAITRPTHGCLSCWSRQGVLMLNTVLTVRRGEANSHKKRGWEQFTDAVIANVNKHASNVVFLLWGKPAQEKGALIDSKRHLVVRSSHPSPLGATKTNAPFLGSKCFSRANSYLKEHGKEPIDW 305
BLAST of NO07G03380 vs. NCBI_GenBank
Match: OQR91428.1 (uracil-DNA glycosylase [Achlya hypogyna]) HSP 1 Score: 271.6 bits (693), Expect = 3.400e-69 Identity = 127/217 (58.53%), Postives = 160/217 (73.73%), Query Frame = 0 Query: 116 WRQLVTNEANKPYFKRLLAFLTQEATSKQVVYPPYPLVFTALTLCRWTDVRVVIIGQDPYHGPNQAHGLAFSVVGPTPPPPSLNNMFKEAVMDVVGFIKPSHGNLEAWSRQGVLLLNTVLTVRRGQAHSHKGKGWESFTDAVIKELDAKKTGLVFLLWGKPAQEKCKNINRKKHRVIQCAHPSPLSATKTSTPFIGSKSFSRANLLLKELGKAPIDW 333 WR+++ E K YFK+L AFL +E K +YPP +FTAL LC + V+VVI+GQDPYHGP QAHGL FSV P PPPPSL N++KEA+ D V KP+HG L +W QGVLLLNTVLTVR +A+SHK +GWE+FTD VI+++ + +G+VFLLWGKPAQEK I+R KH ++ +HPSPL ATKTS PFIGS+ FS+ N L + GK PI+W Sbjct: 60 WREILALEFKKSYFKQLDAFLVREQAKKAKIYPPKQEIFTALNLCPFDQVKVVILGQDPYHGPGQAHGLCFSVQKPVPPPPSLKNIYKEAMAD-VEIAKPTHGCLLSWCHQGVLLLNTVLTVRATEANSHKKQGWENFTDVVIRKISQELSGVVFLLWGKPAQEKIVLIDRTKHCILTSSHPSPLGATKTSEPFIGSRCFSKTNAYLVKQGKEPINW 275
BLAST of NO07G03380 vs. NCBI_GenBank
Match: GAX95942.1 (uracil-DNA glycosyllase [Pythium insidiosum]) HSP 1 Score: 271.6 bits (693), Expect = 3.400e-69 Identity = 128/224 (57.14%), Postives = 161/224 (71.88%), Query Frame = 0 Query: 111 IMDDGWRQLVTNEANKPYFKRLLAFLTQEATSKQVVYPPYPLVFTALTLCRWTDVRVVIIGQDPYHGPNQAHGLAFSVVGPTPPPPSLNNMFKEAVMDVVGFIKPSHGNLEAWSRQGVLLLNTVLTVRRGQAHSHKGKGWESFTDAVIKELDAKKTGLVFLLWGKPAQEKCKNINRKKHRVIQCAHPSPLSATKTSTPFIGSKSFSRANLLLKELGKAPIDWRL 335 +M + W + +E +PYFK L+ FLT E K+ +YP VF AL C + ++VVI+GQDPYHGPNQAHGL+FSV+ PPPSL N++KEA+ D VG KP+HG L WS+QGVL+LNTVLTVRRG+ +SHKG+GWE TDAVI ++ +VFLLWGKPAQ K IN KH +I+ +HPSPL ATKT+ PFIGSK FSRA L++ GK PIDWR+ Sbjct: 99 LMHESWHAQLADEFKRPYFKSLVQFLTTEENKKKTLYPSPENVFAALRDCAFDSLKVVILGQDPYHGPNQAHGLSFSVLPGIQPPPSLVNIYKEAMSD-VGISKPTHGCLSCWSKQGVLMLNTVLTVRRGEPNSHKGQGWEKLTDAVIMRINKHAENVVFLLWGKPAQTKGAIINSSKHLIIKSSHPSPLGATKTNEPFIGSKCFSRAXAYLEKHGKDPIDWRV 321
BLAST of NO07G03380 vs. NCBI_GenBank
Match: XP_008613363.1 (uracil-DNA glycosylase [Saprolegnia diclina VS20] >EQC33240.1 uracil-DNA glycosylase [Saprolegnia diclina VS20]) HSP 1 Score: 271.2 bits (692), Expect = 4.400e-69 Identity = 124/217 (57.14%), Postives = 160/217 (73.73%), Query Frame = 0 Query: 116 WRQLVTNEANKPYFKRLLAFLTQEATSKQVVYPPYPLVFTALTLCRWTDVRVVIIGQDPYHGPNQAHGLAFSVVGPTPPPPSLNNMFKEAVMDVVGFIKPSHGNLEAWSRQGVLLLNTVLTVRRGQAHSHKGKGWESFTDAVIKELDAKKTGLVFLLWGKPAQEKCKNINRKKHRVIQCAHPSPLSATKTSTPFIGSKSFSRANLLLKELGKAPIDW 333 WR+++ E K YFK L AFL +E K +++PP +FTAL LC + ++VVI+GQDPYHGP QAHGL FSV P PPPPSL N++KEA+ D V KPSHG L +W QGVLLLNTVLTVR +A+SHK +GWE+FTD +++++ + +G+VFLLWGKPAQEK I+R KH ++ +HPSPL ATKT+ PFIGS+ FS+ N L + GK PIDW Sbjct: 69 WREMLAPEFKKSYFKSLDAFLVREQQKKAMIFPPKSEIFTALNLCPFDKIKVVILGQDPYHGPGQAHGLCFSVQKPVPPPPSLKNIYKEAIAD-VNIPKPSHGCLLSWCDQGVLLLNTVLTVRATEANSHKKQGWETFTDVIMRKISKETSGVVFLLWGKPAQEKSALIDRSKHCILTSSHPSPLGATKTAEPFIGSRCFSKTNAYLVQQGKDPIDW 284
BLAST of NO07G03380 vs. NCBI_GenBank
Match: OQS07442.1 (uracil-DNA glycosylase [Thraustotheca clavata]) HSP 1 Score: 270.8 bits (691), Expect = 5.700e-69 Identity = 125/217 (57.60%), Postives = 155/217 (71.43%), Query Frame = 0 Query: 116 WRQLVTNEANKPYFKRLLAFLTQEATSKQVVYPPYPLVFTALTLCRWTDVRVVIIGQDPYHGPNQAHGLAFSVVGPTPPPPSLNNMFKEAVMDVVGFIKPSHGNLEAWSRQGVLLLNTVLTVRRGQAHSHKGKGWESFTDAVIKELDAKKTGLVFLLWGKPAQEKCKNINRKKHRVIQCAHPSPLSATKTSTPFIGSKSFSRANLLLKELGKAPIDW 333 WR+++ E K YFK L FL QE K +YPP +FTAL LC + V+VVI+GQDPYHGP QAHGL FSV P PPPPSL N++KEA+ D V KPSHG L +W QGVL+LNTVLTVR + +SHK +GWE+FTD +I+++ G+VFLLWGKPAQEK I+R KH++ +HPSPL ATKT+ PFIGS+ FS+ N L + GK PIDW Sbjct: 55 WREVLAQEFKKSYFKNLDTFLVQEQKKKAKIYPPKDEIFTALNLCPFDKVKVVILGQDPYHGPGQAHGLCFSVQKPVPPPPSLRNIYKEAMSD-VKIPKPSHGCLLSWCHQGVLMLNTVLTVRAAEPNSHKKQGWENFTDVIIRKISQDSEGVVFLLWGKPAQEKIPLIDRSKHKIFTSSHPSPLGATKTAEPFIGSRCFSKTNEYLVQQGKEPIDW 270
BLAST of NO07G03380 vs. NCBI_GenBank
Match: XP_009532122.1 (hypothetical protein PHYSODRAFT_347255 [Phytophthora sojae] >EGZ11789.1 hypothetical protein PHYSODRAFT_347255 [Phytophthora sojae]) HSP 1 Score: 270.0 bits (689), Expect = 9.800e-69 Identity = 128/217 (58.99%), Postives = 161/217 (74.19%), Query Frame = 0 Query: 116 WRQLVTNEANKPYFKRLLAFLTQEATSKQVVYPPYPLVFTALTLCRWTDVRVVIIGQDPYHGPNQAHGLAFSVVGPTPPPPSLNNMFKEAVMDVVGFIKPSHGNLEAWSRQGVLLLNTVLTVRRGQAHSHKGKGWESFTDAVIKELDAKKTGLVFLLWGKPAQEKCKNINRKKHRVIQCAHPSPLSATKTSTPFIGSKSFSRANLLLKELGKAPIDW 333 W ++ E ++ F+ L FL E K+ +YPP VF AL C ++D++VVI+GQDPYHGP QAHGL+FSV PPPPSL N+FKEA+ D VG +P+HG L WS+QGVLLLNTVLTVRRG+A+SHK +GWE FTDAVI ++ + + +VFLLWGKPAQEK I+ K+H V++ +HPSPL ATKT+ PF+GSK FSRAN LKE GK PIDW Sbjct: 249 WFDVLQKEFSRGSFQALTRFLEGEEGRKKTIYPPPADVFAALRDCAFSDLKVVILGQDPYHGPQQAHGLSFSVRHGIPPPPSLKNIFKEAMND-VGIARPTHGCLSCWSKQGVLLLNTVLTVRRGEANSHKKRGWEQFTDAVISKVSKEASNVVFLLWGKPAQEKGALIDTKRHLVVRSSHPSPLGATKTNAPFLGSKCFSRANSYLKEHGKEPIDW 464
BLAST of NO07G03380 vs. NCBI_GenBank
Match: XP_008902215.1 (uracil-DNA glycosylase [Phytophthora parasitica INRA-310] >ETN12221.1 uracil-DNA glycosylase [Phytophthora parasitica INRA-310]) HSP 1 Score: 270.0 bits (689), Expect = 9.800e-69 Identity = 129/228 (56.58%), Postives = 163/228 (71.49%), Query Frame = 0 Query: 105 VLQSLPIMDDGWRQLVTNEANKPYFKRLLAFLTQEATSKQVVYPPYPLVFTALTLCRWTDVRVVIIGQDPYHGPNQAHGLAFSVVGPTPPPPSLNNMFKEAVMDVVGFIKPSHGNLEAWSRQGVLLLNTVLTVRRGQAHSHKGKGWESFTDAVIKELDAKKTGLVFLLWGKPAQEKCKNINRKKHRVIQCAHPSPLSATKTSTPFIGSKSFSRANLLLKELGKAPIDW 333 V+Q +M W L+ E + F+ L FL E K+ +YPP VF AL C ++D++VVI+GQDPYHGP QAHGL+FSV PPPPSL N+FKEA+ D +G +P+HG L WSRQGVLLLNTVLTVRRG+ +SHK +GWE TDA+I +++ + +VFLLWGKPAQEK I+ K+H V++ +HPSPL ATKT+ PF+GSK FSRAN LKE GK PIDW Sbjct: 76 VIQLRSLMHQSWFDLLQKEFARGSFQTLTRFLEGEEGRKKTIYPPPADVFAALRDCAFSDLKVVILGQDPYHGPQQAHGLSFSVRHGVPPPPSLKNIFKEAMND-MGIDRPTHGCLSCWSRQGVLLLNTVLTVRRGEPNSHKKRGWEQLTDAIISKVNKDASNVVFLLWGKPAQEKGALIDSKRHLVVRSSHPSPLGATKTNAPFLGSKCFSRANSYLKEHGKEPIDW 302 The following BLAST results are available for this feature:
BLAST of NO07G03380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G03380 ID=NO07G03380|Name=NO07G03380|organism=Nannochloropsis oceanica|type=gene|length=1186bpback to top protein sequence of NO07G03380.1 >NO07G03380.1-protein ID=NO07G03380.1-protein|Name=NO07G03380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=335bpback to top Synonyms
Publications
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