NO07G03370, NO07G03370 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO07G03370 vs. NCBI_GenBank
Match: EWM27057.1 (hypothetical protein Naga_100056g7 [Nannochloropsis gaditana]) HSP 1 Score: 439.5 bits (1129), Expect = 1.100e-119 Identity = 220/312 (70.51%), Postives = 257/312 (82.37%), Query Frame = 0 Query: 90 GLFQRRSHLGTTSLAASAMAALFLFSPSAAYAARIKGAAELDAEAYLVDLLKGNPLTGGAEQSPLPIRPARVLDKDFATFLDMTTLGLISKISGQSLEKVNKEVSAFRQTVEPGFQRRAPFPSDDLTNERCFDCYSYADFRVAAKLIPDLRARAVFVRDLGEAVLNGVIKGSPGI------KSNDAQKDGLDGTIEGMKQILAYMQSKGFLKDSKINIEDYDRASWDDGYNLELLVTVVEPATLGGNIQFTGEGFLFHPDYVAETLLAYLERCGVKEAKSLQYLLDTEYRPNPKDYNPTEVLYQISVEKGRQ 396 GL RR+ + + + A AALFL PSAA ARIKGAAE+DAEAY DLLKGNPLTGG EQS + IRPARVLDK+FATFLD TTL L+S+ SG S+E V +EV+AFRQ VEPGFQRRAPFP+ DL+NERCFDCYSYADFRVAAKLIP+LRARA FVR LGE VL + +G I ++ DAQKDGL+ + G+ +ILAYM+ KGFLKD ++N +DYDRASWD+G++LE+LVTV+EPATLGGN+QFTGEGFLFHPDYVAETLLAYL CGV+ AK+LQYLLDTEYRPNPKDYNPTEVLYQIS+ KG + Sbjct: 55 GLSSRRTVIDSGATAGKLAAALFLTHPSAA-QARIKGAAEIDAEAYFQDLLKGNPLTGGIEQSAIEIRPARVLDKEFATFLDKTTLKLLSETSGVSMEGVEREVAAFRQAVEPGFQRRAPFPTGDLSNERCFDCYSYADFRVAAKLIPNLRARATFVRQLGETVLGKIFEGQRAIDAKAVPRTYDAQKDGLEEALTGLSRILAYMKLKGFLKDFRVNADDYDRASWDEGFSLEVLVTVIEPATLGGNVQFTGEGFLFHPDYVAETLLAYLALCGVRNAKALQYLLDTEYRPNPKDYNPTEVLYQISLGKGSE 365
BLAST of NO07G03370 vs. NCBI_GenBank
Match: XP_005854086.1 (uracil-DNA glycosylase [Nannochloropsis gaditana CCMP526] >EKU22271.1 uracil-DNA glycosylase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 384.0 bits (985), Expect = 5.500e-103 Identity = 194/282 (68.79%), Postives = 229/282 (81.21%), Query Frame = 0 Query: 90 GLFQRRSHLGTTSLAASAMAALFLFSPSAAYAARIKGAAELDAEAYLVDLLKGNPLTGGAEQSPLPIRPARVLDKDFATFLDMTTLGLISKISGQSLEKVNKEVSAFRQTVEPGFQRRAPFPSDDLTNERCFDCYSYADFRVAAKLIPDLRARAVFVRDLGEAVLNGVIKGSPGI------KSNDAQKDGLDGTIEGMKQILAYMQSKGFLKDSKINIEDYDRASWDDGYNLELLVTVVEPATLGGNIQFTGEGFLFHPDYVAETLLAYLERCGVKEAKSLQ 366 GL RR+ + + + A AALFL PSAA ARIKGAAE+DAEAY DLLKGNPLTGG EQS + IRPARVLDK+FATFLD TTL L+S+ SG S+E V +EV+AFRQ VEPGFQRRAPFP+ DL+NERCFDCYSYADFRVAAKLIP+LRARA FVR LGE VL + +G I ++ DAQKDGL+ + G+ +ILAYM+ KGFLKD ++N +DYDRASWD+G++LE+LVTV+EPATLGGN+QFTGEGFLFHPDYVAETLLAYL CGV+ AK+LQ Sbjct: 38 GLSSRRTVIDSGATAGKLAAALFLTHPSAA-QARIKGAAEIDAEAYFQDLLKGNPLTGGIEQSAIEIRPARVLDKEFATFLDKTTLKLLSETSGVSMEGVEREVAAFRQAVEPGFQRRAPFPTGDLSNERCFDCYSYADFRVAAKLIPNLRARATFVRQLGETVLGKIFEGQRAIDAKAVPRTYDAQKDGLEEALTGLSRILAYMKLKGFLKDFRVNADDYDRASWDEGFSLEVLVTVIEPATLGGNVQFTGEGFLFHPDYVAETLLAYLALCGVRNAKALQ 318
BLAST of NO07G03370 vs. NCBI_GenBank
Match: XP_005829043.1 (hypothetical protein GUITHDRAFT_164226 [Guillardia theta CCMP2712] >EKX42063.1 hypothetical protein GUITHDRAFT_164226 [Guillardia theta CCMP2712]) HSP 1 Score: 147.9 bits (372), Expect = 6.700e-32 Identity = 102/342 (29.82%), Postives = 163/342 (47.66%), Query Frame = 0 Query: 59 PPTLKRITIMSSFS-------GYSDSANMPHPRAAPTRGLFQRRSHLGTTSLAASAMAALFLFSPSAAYAARIKGAAELDAEAYLVDLLKGNPLTGG--AEQSPLPIRPARVLDKDFATFLDMTTLGLISKISGQSLEKVNKEVSAFRQTVEPGFQRRAPFPSDDLTNERCFDCYSYADFRVAAKLIPDLRARAVFVRDLGEAVLNGVIKGSPGIKSNDAQKDGLDGTIEGMKQILAYMQSKGFLKDSKINIEDYDRASW-DDGYNLELLVTVVEPATLGGNIQFTGEGFLFHPDYVAETLLAYLERCGVKEAKSLQYLLDTEYRPNPKDYNPTEVLYQISV 391 P L R+T+M S S + R T RR L A + L +AA ++ GAAELD Y+ TG E + + I PAR +D++ A L + +++G+ +++++ V + R+ V FQ+R F DLT++ D SY ++ A+++P R VF R + + +L + + ++ ++G + +G +LA ++S GFL+ S + + D+D W D L VT+ +P TL N+Q GEG F PD + L YLE CG+ + Y +D YRPNP DY P++VL QI+V Sbjct: 17 PSALDRLTLMRGCSIIDRTRHRCSSRGSRLECRMQGTSDPVSRRRLLQVVLGALVSSTVLLRQDANAATTTKVWGAAELDFWVYICS------ATGKFCPEMTKVEISPARKVDRELAEALHSIPRQVFVEMTGRKVQELDASVDSDRELVLSLFQKRVSFDPSDLTDQYSLDFDSYLVWKSLARILPSNEERRVFQRQVAKRMLEQLTRQGASAVFYNSVEEGPEKAFQGCSSLLALLKSTGFLEASNVEVGDFDVKYWKSDSPPTTLTVTIDKPVTLQANLQLGGEGTGFKPDVIENMLAVYLESCGML-VDWVSYFIDPTYRPNPDDYQPSQVLCQINV 351
BLAST of NO07G03370 vs. NCBI_GenBank
Match: GAX23704.1 (hypothetical protein FisN_12Hh281 [Fistulifera solaris]) HSP 1 Score: 147.5 bits (371), Expect = 8.700e-32 Identity = 98/305 (32.13%), Postives = 157/305 (51.48%), Query Frame = 0 Query: 113 LFSPSAAYAARIKGAAELDAEAYLVDLLKGNPLTGGAEQSPLP-IRPARVLDKDFATFLD-------MTTLGLISKISGQS-------LEK-VNKEVSAFRQTVEPGFQRRAPFPSDDLTNERCFDCYSYADFRVAAKLIPDLRARAVFVRDLGEAVLNGVIKGSPGIKSNDAQKDGLDGTIEGMKQILAYMQSKGFLK---------DSKINIEDYDRASWDDGYNLELLVTVVEPATLGGNIQFTGEGFLFHPDYVAETLLAYLERCGVKEAKSLQYLLDTEYRPNPKDYNPTEVLYQISVEK 393 L +P A AAR GAAELD E Y+ DL+ GN G + S LP + P R L F L+ + T LI++I + LEK + ++V R+ F RAP+ S+ +T++ FD +Y+ ++ AA ++P+ R +FVR++G ++ + G+ + + L I + ++L + S F K D + ++D D +W G +++ L+++ E ATLG ++Q TGE F PD V T+ A + + +S Y +D EYRPNPKDY P E L+Q ++ K Sbjct: 55 LITPQNANAAR--GAAELDFEFYVRDLIGGNRPEGNVQASTLPTLAPPRTLSLFFEKILNKECSIECLATQQLIAQIQRREKKRETTFLEKEIQRQVQTIREGARKSFFSRAPWESETMTDQYFFDLTAYSFWKTAAVMLPNFADRDMFVRNVGRSIYTSL--RDEGLLKTKCRDESLSSCIPCVVEVLDFFVSTNFCKAYRLGEKVDDEYLFLDDIDNQAWSKGVSVDCLLSIFESATLGSSLQITGEQSRFIPDLVGPTIAAVWDPQSSVQWES--YFVDPEYRPNPKDYFPNEQLFQYTLAK 353
BLAST of NO07G03370 vs. NCBI_GenBank
Match: GAX15023.1 (hypothetical protein FisN_12Lh281 [Fistulifera solaris]) HSP 1 Score: 142.9 bits (359), Expect = 2.100e-30 Identity = 98/305 (32.13%), Postives = 156/305 (51.15%), Query Frame = 0 Query: 113 LFSPSAAYAARIKGAAELDAEAYLVDLLKGNPLTGGAEQSPLPI-RPARVLDKDFATFLD-------MTTLGLISKISGQSLEK----VNKEVSAFRQTVEPG----FQRRAPFPSDDLTNERCFDCYSYADFRVAAKLIPDLRARAVFVRDLGEAVLNGVIKGSPGIKSNDAQKDGLDGTIEGMKQILAYMQSKGFLK---------DSKINIEDYDRASWDDGYNLELLVTVVEPATLGGNIQFTGEGFLFHPDYVAETLLAYLERCGVKEAKSLQYLLDTEYRPNPKDYNPTEVLYQISVEK 393 L +P A AAR GAAELD E Y+ D + GN G + S LPI P R L F L+ + T LI++I + ++ + KE+ T+ G F RAP+ S+ +T++ FD +Y+ ++ AA L+P+ R +FVR+LG ++ + + +++ L +I + +L S F K D + ++D D +W +G +++ L+++ E ATLG ++Q TGE F PD V T+ A + + +S Y +D EYRPNPKDY P E L+Q ++ K Sbjct: 64 LAAPQNANAAR--GAAELDLEFYVRDFIGGNRPEGNVQASTLPILAPPRTLSPFFEKVLNKECSIDCLATQQLIAQIQRRDQKRETALLEKEIHRQAHTIGEGARKSFYSRAPWESETMTDQYFFDLTAYSFWKTAAVLLPNFADRDMFVRNLGRSIYQSL--RDERLLQTKCREESLSSSIPCVVAVLDCFVSTNFCKAYRLGEKIDDEYLFLDDIDNQAWSNGVSVDCLLSIFESATLGSSLQITGEQSRFIPDLVGPTIAAVWDTQSTVQWES--YFVDPEYRPNPKDYFPNEQLFQYTLAK 362
BLAST of NO07G03370 vs. NCBI_GenBank
Match: XP_002181694.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46908.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 131.7 bits (330), Expect = 4.900e-27 Identity = 97/313 (30.99%), Postives = 150/313 (47.92%), Query Frame = 0 Query: 116 PSAAYAARIKGAAELDAEAYLVDLLKGNPLTGGA--EQSPLPIRPARVL---------DKDFATFLDMTTLG---LISKISGQSLEKVNKEVS----AFRQTVEPGFQRRAPFPSDDLTNERCFDCYSYADFRVAAKLIPDLRARAVFVRDLGEAVLNGVIKGSPGIKSNDAQKDGLDGTIEGMKQILAYMQSKGFLKDSKIN--------------------IEDYDRASWDDGYNLELLVTVVEPATLGGNIQFTGEGFLFHPDYVAETLLAYLERCGVKEAKSLQYLLDTEYRPNPKDYNPTEVLYQISV 391 PS A AAR GAAELD E Y+ + GN G SP P P + D A+ + + TL L S+ + Q ++ + + A+R+ F +AP+ + ++++ FD SYA +R AA L+P+ R F+R +G +LN + + + A + TI M+ +L S GF +D +I +D D + G +++ LV+V+EPATLG ++Q TGE F PD+V TL A E+ + + + + +D EYRPNPKDY P E L Q ++ Sbjct: 54 PSQAQAAR--GAAELDFEYYIRSAVSGNKREGNVLPSLSPTPPLPRTLKEPLLSLLLNDDCSASCVPIATLVQTILQSRSNTQDSNEIERNIQQRLRAYREKARKSFYAKAPWENALVSDQYYFDLTSYALWRTAADLLPNFVDRDRFIRGIGRDLLNNMQEKGLLPNKSTAIRGSATATIPSMQAVLQTFTSSGFCRDYRIGEAPVLDKKGKIAADAPPVILFDDLDDDALTSGASIDCLVSVLEPATLGASLQITGEQSRFGPDFVGATLSAVWEQADLTSSWEV-FFVDPEYRPNPKDYFPNEQLLQYTI 363
BLAST of NO07G03370 vs. NCBI_GenBank
Match: EJK52026.1 (hypothetical protein THAOC_28744, partial [Thalassiosira oceanica]) HSP 1 Score: 127.1 bits (318), Expect = 1.200e-25 Identity = 93/297 (31.31%), Postives = 140/297 (47.14%), Query Frame = 0 Query: 105 ASAMAALFLFSPSAAYAARIKGAAELDAEAYLVDLLKGNPLTGG--AEQSPLPIRPARVLDKDFATFL------DMTTLGLISKISGQSLEKVNKEVSAFRQTVEPGFQRRAPFPSDDLTNERCFDCYSYADFRVAAKLIPDLRARAVFVRDLGEAVLNGVIK----GSPGIKSNDAQKDGLDGTIEGMKQILAYMQSKGF------------LKDSKINIEDYDRASWDDGYNLELLVTVVEPATLGGNIQFTGEGFLFHPDYVAETLLAYLERCGVKEAKSLQYLLDTEYRPNPK 378 A+++ A+ L P ++A +KGAAE D E YL D GN G A Q P P RP R L L + S+IS + ++ +E+ FR FQ P+ + + +E FD Y+ +RVA+ I D R +FVR++G +L+ VI+ S I + + GL T+ + IL +S GF + + ++ D G +++ LV+V++ +TLGG +Q GEG F+PD+V L A ER G Y +D YRPNPK Sbjct: 27 AASIFAIALGIPLPSHA--VKGAAEYDLEYYLRDAFMGNNKEGNLPASQGP-PPRPPRQLGGPLLPLLLDDQLESCIVMQEFSRISNTPVTELGEEIKIFRNKAARAFQVSHPYVQESVRDEYFFDLTCYSIWRVASVRIQDFSKRDLFVRNVGRKLLDEVIRLGLIPSKNINTLQSGSGGLTDTLPAVIGILELFKSSGFCTKFQLGDKNDEFRTGMLAFDELDDEELRGGGSIDCLVSVLDASTLGGALQINGEGSRFYPDFVGPVLAAIWERAGRVSINYESYFVDPVYRPNPK 320
BLAST of NO07G03370 vs. NCBI_GenBank
Match: CEM29174.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 112.5 bits (280), Expect = 3.100e-21 Identity = 89/320 (27.81%), Postives = 148/320 (46.25%), Query Frame = 0 Query: 103 LAASAMAALFLFSPSAAYAARIK--------GAAELDAEAYLVDLLKGNPLTGGAEQSPLPIRPARVLDKDFATFLDMTTLGLISKISGQSLEKVNKEVSAFRQTVEPGFQRRAPFPSDDLTNERCFDCYSYADFRVAAKLIPD-------LRARAVF-------VRDLGEAVLNGVIKG--SPGIKSNDAQKDGLDGTIEGMKQILAYMQSKGFLKDSKINIEDYDRASWDDGYN-LELLVTVVEPATLGGNIQFTGEGFLFHPDYVAETLLAYLERCGVKEAKSLQYLLDTEYRPNPKDYNPTEVLYQISVEKGRQPL 398 LAAS +A L L P++A A I G+ ELD + YL +L+ N G + PL AR LD++ L +G + ++SG S ++ E+ + + F +R + D ++ FD +S+ ++VAA IP AR F +RD+ A + G P ++ DA+++GL + G++++L +Q GF++ K+ +Y W L + V+V E A+L + E F PD++ + YL C + + LD ++RPNP DY +E LY V++ L Sbjct: 105 LAASVLAGLALL-PASASAGGIPWTGGEKGLGSGELDLQMYLYNLINRNRPMG--KTDPLDFVVARTLDENLVKALKEAAMGELQRVSGVSRRQLQSEMEELLRKRDKLFSQR--YLVTDERDQYAFDLWSWLLWKVAASHIPKGDANDPLGTARRSFQLSIGRRLRDIARARHEALYAGDSEPFMRVYDAEREGLGEAVSGIERMLRVLQKDGFIRSYKVATPEYMDEDWAARSGPLNIQVSVYESASLTASTLLNDERTNFRPDWIGTAVTTYLRDCNLPYNGYEELFLDEKWRPNPADYRVSEQLYSFIVDRSLDSL 419
BLAST of NO07G03370 vs. NCBI_GenBank
Match: XP_002297458.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED86242.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 111.7 bits (278), Expect = 5.300e-21 Identity = 82/276 (29.71%), Postives = 131/276 (47.46%), Query Frame = 0 Query: 155 PIRPARVLDKDFATFLDMTTLGLISKISGQSLEKVNKEVSAFRQTVEPGFQRRAPFPSDDLTNERCFDCYSYADFRVAAKLIP-DLRARAVFVRDLGEAVLNGVI------KGSPGIKSNDAQKDG--LDGTIEGMKQILAYMQSKGFLKDSKI---------------NIEDYDRASWDDGYNLELLVTVVEPATLGGNIQFTGEGFLFHPDYVAETLLAYLERC--------------GVKEAKSLQYLLDTEYRPNPKDYNPTEVLYQISVEK 393 P+ P +LD + T + + L SKI+ +++++ A R V+P F R P+ + +++E FD Y+ ++VA+ IP D R FVR++G +L I K S S +K G L TI + +IL QS + + ++ ++D + +S G ++ LV++ +P+ LGG +Q TGEG F PD+V TL A ER GV + Y +D YRPNPKD+ P E YQ ++ + Sbjct: 26 PLLPL-LLDDELQTSIPIQEL---SKITNTPPSTLSEQIKAVRSKVQPAFSARYPWKDELVSDEYYFDLTCYSVWKVASIAIPNDYVKRDEFVRNIGRRILEEAISKEIISKQSIDALSKAGEKTGSTLTSTIPCIIEILNLFQSTNYCSNYRLGDKNDEVRTGPGVFDELDDEELSSSSTGGSVNCLVSIYDPSDLGGALQITGEGSRFAPDFVGPTLAAIWERVGGSSSGSGGKKRGEGVVAVQFESYFVDPVYRPNPKDFFPNERFYQYTIAR 297
BLAST of NO07G03370 vs. NCBI_GenBank
Match: OEU21330.1 (hypothetical protein FRACYDRAFT_167495 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 81.3 bits (199), Expect = 7.700e-12 Identity = 50/145 (34.48%), Postives = 74/145 (51.03%), Query Frame = 0 Query: 260 GSPGIKSNDAQKDG-LDGTIEGMKQILAYMQSKGFLKDSKINIEDYDRASW-------DDGYNL----ELLVTVVEPATLGGNIQFTGEGFLFHPDYVAETLLAYLERCGVKEAKSLQYLLDTEYRPNPKDYNPTEVLYQISVEK 393 G + SN + DG L TI + ++L + G+ K+ +I D + S D+ + LV++ EPATLG ++Q GE F PD+V +L A E+ G + + +D EYRPNPKDY P E L QI++ K Sbjct: 15 GQQQMSSNKDKNDGALVSTIPAIVEVLELFKRSGYCKNFRIRSSDDNNDSGPIFDELDDESLTIYGTANCLVSIYEPATLGASLQINGENSRFAPDFVGTSLAAIWEKHGGIRSTWDVFFVDPEYRPNPKDYFPNEQLLQITLNK 159 The following BLAST results are available for this feature:
BLAST of NO07G03370 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 12
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G03370 ID=NO07G03370|Name=NO07G03370|organism=Nannochloropsis oceanica|type=gene|length=1434bpback to top protein sequence of NO07G03370.1 >NO07G03370.1-protein ID=NO07G03370.1-protein|Name=NO07G03370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=398bpback to top Synonyms
Publications
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