NO07G03360, NO07G03360 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G03360 vs. NCBI_GenBank
Match: XP_005854089.1 (peptidyl-prolyl cis-trans isomerase b precursor [Nannochloropsis gaditana CCMP526] >EKU22274.1 peptidyl-prolyl cis-trans isomerase b precursor [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 316.2 bits (809), Expect = 9.700e-83 Identity = 151/183 (82.51%), Postives = 164/183 (89.62%), Query Frame = 0 Query: 85 FDQETVLDPIYPNVTEPAFTSTCFLEFASENTKFGRVEVSLYGKVCPKTAANFEALCREGYKGSNVYRVLKDFSIQMGDIGSKKRGVMGRSSFEGGAPFAKETMQVQHSLEGMLSMVNDREGKVDSRFFINLGKDGSWADGRYVAFGRVTRGLEVLKELEKVEVKPPSNVPATPIKIVEAGVL 268 +DQ V DPI+PN+TEPA TS CFLEFASE T FGR+EVSLYGKVCP+TAANFEALCR+GYKGSNVYRVLKDFSIQMGDIGSKKRG GRSS +GG P KET++VQHSLEGMLSMVND+ G VDSRFFIN+GKDGSWADGRYVAFGRVT+GLEVLKE+EKVEVKPPSNVP PIKI AGVL Sbjct: 52 YDQVEVSDPIFPNITEPAVTSVCFLEFASEKTNFGRIEVSLYGKVCPQTAANFEALCRDGYKGSNVYRVLKDFSIQMGDIGSKKRGATGRSSLKGGTPLPKETLRVQHSLEGMLSMVNDKSGTVDSRFFINMGKDGSWADGRYVAFGRVTKGLEVLKEVEKVEVKPPSNVPTLPIKITAAGVL 234
BLAST of NO07G03360 vs. NCBI_GenBank
Match: EWM27037.1 (peptidyl-prolyl cis-trans isomerase b precursor [Nannochloropsis gaditana]) HSP 1 Score: 314.3 bits (804), Expect = 3.700e-82 Identity = 167/262 (63.74%), Postives = 187/262 (71.37%), Query Frame = 0 Query: 6 QPGLFLLVLLGTSLVVQGFLPPTSVPTRETTKLTALRATPASTPEHDDRRSWFQQVAVSMLALSATNTFLRPSSASATRFDQETVLDPIYPNVTEPAFTSTCFLEFASENTKFGRVEVSLYGKVCPKTAANFEALCREGYKGSNVYRVLKDFSIQMGDIGSKKRGVMGRSSFEGGAPFAKETMQVQHSLEGMLSMVNDREGKVDSRFFINLGKDGSWADGRYVAFGRVTRGLEVLKELEKVEVKPPSNVPATPIKIVEAGVL 268 Q L + +LL SLV+QGFL P + + +L A PA + +DQ V DPI+PN+TEPA TS CFLEFASE T FGR+EVSLYGKVCP+TAANFEALCR+GYKGSNVYRVLKDFSIQMGDIGSKKRG GRSS +GG P KET++VQHSLEGMLSMVND+ G VDSRFFIN+GKDGSWADGRYVAFGRVT+GLEVLKE+EKVEVKPPSNVP PIKI AGVL Sbjct: 45 QSCLCITMLLMASLVIQGFLGTVQGPRQR--RDISLSAAPA-----XXXXXXXXXXXXXXXXXXXXXXXXXXXPTLSAPYDQVEVSDPIFPNITEPAVTSVCFLEFASEKTNFGRIEVSLYGKVCPQTAANFEALCRDGYKGSNVYRVLKDFSIQMGDIGSKKRGATGRSSLKGGTPLPKETLRVQHSLEGMLSMVNDKSGTVDSRFFINMGKDGSWADGRYVAFGRVTKGLEVLKEVEKVEVKPPSNVPTLPIKITAAGVL 299
BLAST of NO07G03360 vs. NCBI_GenBank
Match: CEM10275.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 149.1 bits (375), Expect = 2.100e-32 Identity = 79/184 (42.93%), Postives = 116/184 (63.04%), Query Frame = 0 Query: 94 IYPNVTEPAFTSTCFLEFASENTK-------FGRVEVSLYGKVCPKTAANFEALCREG-YKGSNVYRVLKDFSIQMGDIGSKKRGVMGRSSFEGGAPFAKETMQVQHSL--EGMLSMVND-REGKVDSRFFINLGKDGSWADGRYVAFGRVTRGLEVLKELEKVEVKPPSNVPATPIKIVEAGV 267 ++ N T P T+ C+LE A GR+ +S+YG++ PKTA NF LC G Y+ S +YR++KD+++QMGDIG+ G GRS+ G+P KE +++HS+ G++SMV D + KVDSRFFI L D WAD R+VAFGRV G ++++L K +V+P +N P + I ++GV Sbjct: 118 VFLNETTPKITARCWLEIAEAPKTADGAPLLLGRLNISVYGEIVPKTADNFIQLCSSGSYQNSTIYRIVKDYALQMGDIGAAGTGKSGRSAQPDGSPLPKENTRIRHSVPGHGVVSMVRDLKTKKVDSRFFITLVDDAGWADSRFVAFGRVQGGEGLMEQLGKEKVEPVTNRPVRKLIIADSGV 301
BLAST of NO07G03360 vs. NCBI_GenBank
Match: OEU15764.1 (cyclophilin-like protein, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 143.3 bits (360), Expect = 1.100e-30 Identity = 75/166 (45.18%), Postives = 99/166 (59.64%), Query Frame = 0 Query: 101 PAFTSTCFLEFASENTKFGRVEVSLYGKVCPKTAANFEALC-REGYKGSNVYRVLKDFSIQMGDIGSKKRGVMGRSSFEGGAPFAKETMQVQHSLEGMLSMVNDREGKVDSRFFINLGKDGSWADGRYVAFGRVTRGLEVLKELEKVEVKPPSNVPATPIKIVEAG 266 P T +L+ + GR+ + LYG + PKTA NFE LC Y G+N YRV+ D +IQ G IG G G+SSF+ G F + ++HS G+LSMV G VDSRFFIN +D WAD RY AFG V G+ ++K++EKV V PP N P +KI+ +G Sbjct: 3 PKITKRVYLDVEFGKNEKGRLVIGLYGDIMPKTAENFEKLCASNSYAGTNFYRVISDTTIQGGAIGDPS-GKTGKSSFDDGKSFEPDNFNIKHSKSGILSMVKG-IGGVDSRFFINTQEDAGWADDRYAAFGIVEEGMYLVKQIEKVPVSPPKNSPVNEVKILASG 166
BLAST of NO07G03360 vs. NCBI_GenBank
Match: CBJ26729.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 132.5 bits (332), Expect = 2.000e-27 Identity = 74/187 (39.57%), Postives = 108/187 (57.75%), Query Frame = 0 Query: 87 QETVLDPIYPNVTEPAFTSTCFLEFASENTKFGRVEVSLYGKVCPKTAANFEAL------CREGYKGSNVYRVLKDFSIQMGDIGSKKRGVMGRSSFEGGAPFAKETMQVQHSLEGMLSMVNDREGKVDSRFFINLGKDGSWADGRYVAFGRVTRGLEVLKELEKVEVKPPSNVPATPIKIVEAGVL 268 ++ V D I EP T F++ ++ GR+ ++LYGKV P T NF AL Y+G+ YRVL +IQMG IGS+ G G SS G +E ++H EG+LSMV + + + DSRFFI++ D WAD RYVAFGR+ G++V+ +E+V+V+ +N P P+ I + G+L Sbjct: 81 EKMVADKIAAGWQEPEVTQRAFMDITIGDSPSGRLVINLYGKVVPDTVKNFVALITGKNAAGVSYQGTEAYRVLDGLNIQMGAIGSRS-GKSGVSS--TGENIPQENFDIKHMKEGLLSMVRNADAQGDSRFFISIKDDAGWADDRYVAFGRIAEGMDVVHLIERVKVEGGTNKPKKPVVIEKCGML 264
BLAST of NO07G03360 vs. NCBI_GenBank
Match: KOO28782.1 (peptidyl-prolyl cis-trans isomerase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 131.7 bits (330), Expect = 3.400e-27 Identity = 71/178 (39.89%), Postives = 102/178 (57.30%), Query Frame = 0 Query: 98 VTEPAFTSTCFLEFASENTKFGRVEVSLYGKVCPKTAANFEALCR----EGYKGSNVYRVLKDFSIQMGDIGSKKRGVMGRSSFEGGAPFAKETMQVQHSLEGMLSMVN----DREGKVDSRFFINLGKDGSWADGRYVAFGRVTRGLEVLKELEKVEVKPPSNVPATPIKIVEAGVL 268 VT P TS C+L+ A + + GR+ + LYG+V P+ A NF ALC GY+GS+ +++L +Q G+ V G SS G PFA + ++H++ GM+SMVN G+ D+RF I L D + DGRY AFGRV+ G+ V++ +E+V VK VP + I AG L Sbjct: 2 VTPPKVTSRCYLDVAIDGSPAGRIAIDLYGEVAPRAAENFRALCTGEKGYGYQGSSFFKILSGLVMQAGE-------VPGHSSIYGDQPFAHDNYLIKHNVAGMVSMVNTGVGGNSGQSDTRFLIQLPDDAGFLDGRYEAFGRVSAGMNVVRMIEQVPVKTTRQVPVQKVSIEAAGEL 172
BLAST of NO07G03360 vs. NCBI_GenBank
Match: EJK73815.1 (hypothetical protein THAOC_04545 [Thalassiosira oceanica]) HSP 1 Score: 128.6 bits (322), Expect = 2.900e-26 Identity = 71/185 (38.38%), Postives = 100/185 (54.05%), Query Frame = 0 Query: 94 IYPNVTEPAFTSTCFLEFASENTKF-GRVEVSLYGKVCPKTAANFEALCR------EGYKGSNVYRVLKDFSIQMGDIGSKKRGVMGRSSFEGGAPFAKETMQVQHSLEGMLSMVNDREGKVDSRFFINLGKDGSWADGRYVAFGRVTR---GLEVLKELEKVEVKPPSNVPATPIKIVEAGVLE 269 I P+V P TS +L+ K R+ + L+G+ P+ A NF +LC Y G+ YR L SIQ G IGS G G SS E GA F + ++HS +G++S V + G++DSRFF+ D WADGRY AFG V G+++++ + V+V+ P N P PI IV G L+ Sbjct: 22 IDPSVAPPRVTSKVYLDVKFAKYKEPKRLVIGLFGEAMPRAAENFASLCAGDNAGGRSYAGTRFYRALSGNSIQGGAIGSPNTGRSGLSSLEDGATFPPDNFDIKHSTQGLVSAVRNPNGEIDSRFFVQTEDDAGWADGRYAAFGIVLEEGGGMDLVRRISNVDVQTPQNSPKDPITIVACGRLD 206
BLAST of NO07G03360 vs. NCBI_GenBank
Match: XP_002292448.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED90423.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 128.3 bits (321), Expect = 3.800e-26 Identity = 71/178 (39.89%), Postives = 99/178 (55.62%), Query Frame = 0 Query: 101 PAFTSTCFLEFASENTKF-GRVEVSLYGKVCPKTAANFEALCRE----GYKGSNVYRVLKDFSIQMGDIGS-KKRGVMGRSSFEGGAPFAKETMQVQHSLEGMLSMVNDREGKVDSRFFINLGKDGSWADGRYVAFGRV-----TRGLEVLKELEKVEVKPPSNVPATPIKIVEAGVL 268 P T +L+ K R+ + L+G+ KTA NF+ LC Y G++ YRV+ +IQ G IGS G G S+FE GAPF + ++H +G++S V + G +DSRFFI D WAD RY AFG V T G+E++K+L ++EVK P N P P+ IV G+L Sbjct: 1 PKITQKVYLDIKLPTNKTPKRLVIGLFGEAMHKTAENFQTLCTNTEGPSYAGTSFYRVISGTTIQGGAIGSNSSSGKSGTSAFENGAPFTPDNYNIKHRTKGLVSAVRNANGTIDSRFFIQTEDDAGWADDRYAAFGIVLEEEGTGGMELVKKLSRLEVKAPQNSPKDPVLIVGCGLL 178
BLAST of NO07G03360 vs. NCBI_GenBank
Match: EMD90907.1 (hypothetical protein COCHEDRAFT_1021706 [Bipolaris maydis C5]) HSP 1 Score: 123.2 bits (308), Expect = 1.200e-24 Identity = 78/216 (36.11%), Postives = 114/216 (52.78%), Query Frame = 0 Query: 58 FQQVAVS-MLALSATNTFLRPSSASATRFDQETVLDPIYPNVTEPAFTSTCFLEFASENTKFGRVEVSLYGKVCPKTAANFEALCRE----GYKGSNVYRVLKDFSIQMGDIGSKKRGVMGRSSFEGGAPFAKETMQVQHSLEGMLSMVNDREGKVDSRFFINLGKDGSWADGRYVAFGRVTRGLEVLKELEKVEVKPPSNVPATPIKIVEAGVLE 269 FQ+ +S +L LS T F S+ + V P TS F + + GR+ + LYGK PKT NF AL GY+GS +RV+KDF IQ GD +K G G+S + G F E +++H+ +G+LSM N + S+FFI SW DG++V FG+V G +V++++E V+ K P + P P+KI ++G LE Sbjct: 4 FQKAVISLLLILSITFVFFAQSTEA----------------VKSPKITSKVFFDIEQDGESLGRIVIGLYGKTVPKTTENFRALATGEKGFGYEGSTFHRVIKDFMIQGGDF-TKGDGTGGKSIY--GEKFPDENFKLKHTRKGLLSMANAGKDTNGSQFFITTAIT-SWLDGKHVVFGQVLEGYDVVEKIENVQ-KAPGDRPVKPVKIAKSGELE 198
BLAST of NO07G03360 vs. NCBI_GenBank
Match: XP_014079919.1 (hypothetical protein COCC4DRAFT_80920 [Bipolaris maydis ATCC 48331] >ENI06010.1 hypothetical protein COCC4DRAFT_80920 [Bipolaris maydis ATCC 48331]) HSP 1 Score: 123.2 bits (308), Expect = 1.200e-24 Identity = 78/216 (36.11%), Postives = 114/216 (52.78%), Query Frame = 0 Query: 58 FQQVAVS-MLALSATNTFLRPSSASATRFDQETVLDPIYPNVTEPAFTSTCFLEFASENTKFGRVEVSLYGKVCPKTAANFEALCRE----GYKGSNVYRVLKDFSIQMGDIGSKKRGVMGRSSFEGGAPFAKETMQVQHSLEGMLSMVNDREGKVDSRFFINLGKDGSWADGRYVAFGRVTRGLEVLKELEKVEVKPPSNVPATPIKIVEAGVLE 269 FQ+ +S +L LS T F S+ + V P TS F + + GR+ + LYGK PKT NF AL GY+GS +RV+KDF IQ GD +K G G+S + G F E +++H+ +G+LSM N + S+FFI SW DG++V FG+V G +V++++E V+ K P + P P+KI ++G LE Sbjct: 4 FQKAVISLLLILSITFVFFAQSTEA----------------VKSPKITSKVFFDIEQDGESLGRIVIGLYGKTVPKTTENFRALATGEKGFGYEGSTFHRVIKDFMIQGGDF-TKGDGTGGKSIY--GEKFPDENFKLKHTRKGLLSMANAGKDTNGSQFFITTAIT-SWLDGKHVVFGQVLEGYDVVEKIENVQ-KAPGDRPVKPVKIAKSGELE 198 The following BLAST results are available for this feature:
BLAST of NO07G03360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G03360 ID=NO07G03360|Name=NO07G03360|organism=Nannochloropsis oceanica|type=gene|length=1147bpback to top protein sequence of NO07G03360.1 >NO07G03360.1-protein ID=NO07G03360.1-protein|Name=NO07G03360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=273bpback to top Synonyms
Publications
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