NO07G03240, NO07G03240 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO07G03240
Unique Name	NO07G03240
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2207
Alignment location	chr7:895387..897593 -

Link to JBrowse

Properties


Property Name	Value
Description	Cysteine subfamily

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr7	genome	chr7:895387..897593 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR015424	PyrdxlP-dep_Trfase
IPR000192	Aminotrans_V_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0016740	transferase activity
GO:0005488	binding

Vocabulary: **Biological Process**
Term	Definition
GO:0009987	cellular process
GO:0008152	metabolic process

Homology

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BLAST of NO07G03240 vs. NCBI_GenBank
Match: EWM27067.1 (cysteine subfamily [Nannochloropsis gaditana])

HSP 1 Score: 738.0 bits (1904), Expect = 2.000e-209
Identity = 356/423 (84.16%), Postives = 385/423 (91.02%), Query Frame = 0

Query:  114 PTSTLGDNLKADFPALHQDAYPGKPLVYLDSAATSQKPKQVLNAMSEYYEHSNANVHRGAHALSIRATEAYEATRDKVQNFIHASTREEIVFTRGATEAINLVANTWGIQNLKAGDEILLTVMEHHSNLVPWQLIAKKTGAVIKFVGLDEEEGLDLPQFHSLLSSKTKLVAFPHVSNTLGCILPVAEMAAAAHAVGALVLVDACQSIPHMKVDVQALDVDFLAASSHKMCGPTGAGFLYGKLGVLKQMPPWHGGGEMIDEVFFEYSTFAEPPARFEAGTPPIAEVVGMGAACDYLMEVGMEKVEEHEHQLGKYLYERLSEVEGVRIYGPPPGKEGKGRAALASFNTDQVHASDLAFFLDHEGVAIRSGHHCTQPLHRMLHAKGSLRASLYVYNTKGDIDVFIARLKETMEFFGNFQSGGAGAA 537
            P+STLG  LK+DFP L QDAYPGKPLVYLDSAATSQKP+QVL AM+ YYE SNANVHRG HALSIRAT+AYEA RDKVQ+F+HA  REEIVFTRGATEAINLVA TWG+QNLK GDEILLTVMEHHSNLVPWQL+A KTGAV+KFVGL++ EGLD+ QF++LLS KTKLVAFPHVSNTLGCILP  +MAAAAH VGA+VLVDACQS+PHMKVDVQ LDVDFLAASSHKMCGPTGAGFLYGKL +LK+MPPW GGGEMIDEVF EYST+A PPARFEAGTPPIAEVVGMGAACDYL +VGME VE HE  LGKYLYE+L EVEG+RIYGPPPG+ GKGRAALA+FNTDQVHASDLAFFLDHEGVAIRSGHHCTQPLHRMLHAKGSLRASLYVYNTK D+DVFIA+L+ETM FFGNFQ  G G A
Sbjct:   38 PSSTLGYELKSDFPTLDQDAYPGKPLVYLDSAATSQKPRQVLEAMAAYYEQSNANVHRGVHALSIRATDAYEAARDKVQHFVHAGAREEIVFTRGATEAINLVAYTWGLQNLKEGDEILLTVMEHHSNLVPWQLVAAKTGAVLKFVGLNDAEGLDMDQFYALLSPKTKLVAFPHVSNTLGCILPAKDMAAAAHRVGAVVLVDACQSVPHMKVDVQDLDVDFLAASSHKMCGPTGAGFLYGKLALLKEMPPWQGGGEMIDEVFLEYSTYAGPPARFEAGTPPIAEVVGMGAACDYLTKVGMEAVEAHEQALGKYLYEKLDEVEGLRIYGPPPGENGKGRAALAAFNTDQVHASDLAFFLDHEGVAIRSGHHCTQPLHRMLHAKGSLRASLYVYNTKEDVDVFIAKLRETMHFFGNFQGSGGGNA 460

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BLAST of NO07G03240 vs. NCBI_GenBank
Match: CBJ27325.1 (Cysteine desulfurase [Ectocarpus siliculosus])

HSP 1 Score: 577.8 bits (1488), Expect = 3.500e-161
Identity = 276/419 (65.87%), Postives = 331/419 (79.00%), Query Frame = 0

Query:  117 TLGDNLKADFPALHQDAYPGKPLVYLDSAATSQKPKQVLNAMSEYYEHSNANVHRGAHALSIRATEAYEATRDKVQNFIHASTREEIVFTRGATEAINLVANTWGIQNLKAGDEILLTVMEHHSNLVPWQLIAKKTGAVIKFVGLDEEEGLDLPQFHSLLSSKTKLVAFPHVSNTLGCILPVAEMAAAAHAVGALVLVDACQSIPHMKVDVQALDVDFLAASSHKMCGPTGAGFLYGKLGVLKQMPPWHGGGEMIDEVFFEYSTFAEPPARFEAGTPPIAEVVGMGAACDYLMEVGMEKVEEHEHQLGKYLYERLSEVEGVRIYGPPPGKEGKGRAALASFNTDQVHASDLAFFLDHEGVAIRSGHHCTQPLHRMLHAKGSLRASLYVYNTKGDIDVFIARLKETMEFFGNFQSGGAGA 536
            +LG+ ++ADFP L Q+AYPGKPLVYLDSAATSQKPK V++ + +YYE  NANVHRGAH LSIRATEAYEA R+KV  F++A T  EIVFTRGATEAINLVA TWG+ NL AGDEI+ TVMEHHSN+VPWQL+A++TGAV+KF  + E+  LDL    SL++ KTKLVA  H SN LG + PV+E+A AAHAVGA VLVD CQS+P+M VDVQ L VD+L AS HKMCGPTG GFL+G++ VL+ M PW GGGEMID+V+F++STFAEPPARFEAGTP IA+ VG+GAACDYL  +GME    +EH++ KYL+ERLSEVEG+  YGPPP   G  R  L +FN+  VHA DL+FF+D EGVAIR+GHHCTQ LHR L A GSLRASLY+YNTK D+D FI  L+ T++ F      G GA
Sbjct:   25 SLGERVRADFPILDQEAYPGKPLVYLDSAATSQKPKVVMDVLRDYYERDNANVHRGAHQLSIRATEAYEAAREKVGAFVNAETSREIVFTRGATEAINLVAQTWGLDNLAAGDEIVTTVMEHHSNMVPWQLLAERTGAVLKFAQIREDMSLDLDHMKSLITDKTKLVAVVHASNALGGVNPVSEIAEAAHAVGAKVLVDGCQSVPNMPVDVQTLGVDWLVASGHKMCGPTGIGFLWGRMSVLETMRPWQGGGEMIDQVYFDHSTFAEPPARFEAGTPAIAQAVGLGAACDYLSSIGMENGAAYEHEMSKYLWERLSEVEGLDFYGPPPNASGDNRNPLLAFNSRDVHAHDLSFFMDQEGVAIRAGHHCTQALHRQLGAAGSLRASLYIYNTKDDVDQFIEALRSTLDMFKAMDGDGGGA 443

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BLAST of NO07G03240 vs. NCBI_GenBank
Match: WP_046660942.1 (SufS family cysteine desulfurase [Microcystis aeruginosa] >AKE63027.1 Cysteine desulfurase [Microcystis aeruginosa NIES-2549] >AOC51421.1 Cysteine desulfurase [Microcystis aeruginosa NIES-2481])

HSP 1 Score: 552.4 bits (1422), Expect = 1.600e-153
Identity = 262/411 (63.75%), Postives = 324/411 (78.83%), Query Frame = 0

Query:  117 TLGDNLKADFPALHQDAYPGKPLVYLDSAATSQKPKQVLNAMSEYYEHSNANVHRGAHALSIRATEAYEATRDKVQNFIHASTREEIVFTRGATEAINLVANTWGIQNLKAGDEILLTVMEHHSNLVPWQLIAKKTGAVIKFVGLDEEEGLDLPQFHSLLSSKTKLVAFPHVSNTLGCILPVAEMAAAAHAVGALVLVDACQSIPHMKVDVQALDVDFLAASSHKMCGPTGAGFLYGKLGVLKQMPPWHGGGEMIDEVFFEYSTFAEPPARFEAGTPPIAEVVGMGAACDYLMEVGMEKVEEHEHQLGKYLYERLSEVEGVRIYGPPPGKEGKGRAALASFNTDQVHASDLAFFLDHEGVAIRSGHHCTQPLHRMLHAKGSLRASLYVYNTKGDIDVFIARLKETMEFFGN 528
            TL   ++ADFP LHQ  +  KPL+YLDSAATSQKP QVL  +  YYE  NANVHRGAH LS+RATEAYE  RDKV  FI+A++R+EIV+TR ATEAINLVA +W +  LKAGDEI+L+VMEHHSNL+PWQ++ +KTGAVIK+V L  EE  DL Q+ SLLS KTKLVA  HVSNTLGCI PVAE+ + AH VGA VL+DACQS+PH+ +DVQ++D D+L AS HKMC PTG GFLYGK  +L+ MPP+ GGGEMI EV+ ++ T AE P +FEAGTP I E + +GAA +YLM +GM+ +  +E +L  YL+++L E+EG+RIYGPPP   G+GRA+LA+FN + +HASDLA  LDHEG+AIRSGHHCTQPLHR+  A GS RASLY YNT+ +ID FI  L+ET++FF N
Sbjct:    8 TLAQKVRADFPILHQTVH-DKPLIYLDSAATSQKPIQVLETLRNYYEKDNANVHRGAHTLSVRATEAYEGARDKVARFINAASRQEIVYTRNATEAINLVAYSWALNTLKAGDEIILSVMEHHSNLIPWQIVCQKTGAVIKYVQLTSEESFDLEQYKSLLSDKTKLVAVLHVSNTLGCINPVAEIVSLAHQVGAKVLIDACQSVPHLAIDVQSIDCDWLVASGHKMCAPTGIGFLYGKEAILEAMPPFFGGGEMIAEVYLDHFTCAELPHKFEAGTPAIGEAIALGAAVEYLMGLGMDNIHAYEEELTAYLFKKLGEIEGLRIYGPPPSLTGQGRASLAAFNVEGIHASDLATLLDHEGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTREEIDSFIVALQETIDFFAN 417

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BLAST of NO07G03240 vs. NCBI_GenBank
Match: WP_103113124.1 (SufS family cysteine desulfurase [Microcystis aeruginosa] >GBD54732.1 cysteine desulfurase [Microcystis aeruginosa NIES-298] >GBE95783.1 cysteine desulfurase [Microcystis aeruginosa NIES-298])

HSP 1 Score: 552.0 bits (1421), Expect = 2.100e-153
Identity = 261/411 (63.50%), Postives = 324/411 (78.83%), Query Frame = 0

Query:  117 TLGDNLKADFPALHQDAYPGKPLVYLDSAATSQKPKQVLNAMSEYYEHSNANVHRGAHALSIRATEAYEATRDKVQNFIHASTREEIVFTRGATEAINLVANTWGIQNLKAGDEILLTVMEHHSNLVPWQLIAKKTGAVIKFVGLDEEEGLDLPQFHSLLSSKTKLVAFPHVSNTLGCILPVAEMAAAAHAVGALVLVDACQSIPHMKVDVQALDVDFLAASSHKMCGPTGAGFLYGKLGVLKQMPPWHGGGEMIDEVFFEYSTFAEPPARFEAGTPPIAEVVGMGAACDYLMEVGMEKVEEHEHQLGKYLYERLSEVEGVRIYGPPPGKEGKGRAALASFNTDQVHASDLAFFLDHEGVAIRSGHHCTQPLHRMLHAKGSLRASLYVYNTKGDIDVFIARLKETMEFFGN 528
            TL   ++ADFP LHQ  +  KPL+YLDSAATSQKP QVL  +  YYE  NANVHRGAH LS+RATEAYE  RDKV  FI+A++R+EIV+TR ATEAINLVA +W +  LKAGDEI+L+VMEHHSNL+PWQ++ +KTGAVIK+V L  +E  DL Q+ SLLS KTKLVA  HVSNTLGCI PVAE+ + AH VGA VL+DACQS+PH+ +DVQ++D D+L AS HKMC PTG GFLYGK  +L+ MPP+ GGGEMI EV+ ++ T AE P +FEAGTP I E + +GAA +YLM +GM+ +  +E +L  YL+++L E+EG+RIYGPPP   G+GRA+LA+FN + +HASDLA  LDHEG+AIRSGHHCTQPLHR+  A GS RASLY YNT+ +ID FI  L+ET++FF N
Sbjct:    8 TLAQKVRADFPILHQTVH-DKPLIYLDSAATSQKPIQVLETLRNYYEKDNANVHRGAHTLSVRATEAYEGARDKVARFINAASRQEIVYTRNATEAINLVAYSWALNTLKAGDEIILSVMEHHSNLIPWQIVCQKTGAVIKYVQLTSDESFDLEQYKSLLSEKTKLVAVLHVSNTLGCINPVAEIVSLAHQVGAKVLIDACQSVPHLAIDVQSIDCDWLVASGHKMCAPTGIGFLYGKEAILEAMPPFFGGGEMISEVYLDHFTCAELPHKFEAGTPAIGEAIALGAAVEYLMGLGMDNIHAYEEELTAYLFKKLGEIEGLRIYGPPPSLTGQGRASLAAFNVEGIHASDLATLLDHEGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTREEIDSFIVALQETIDFFAN 417

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BLAST of NO07G03240 vs. NCBI_GenBank
Match: WP_002747760.1 (SufS family cysteine desulfurase [Microcystis aeruginosa] >CAO86893.1 sufS [Microcystis aeruginosa PCC 7806] >ELS45678.1 putative cysteine desulfurase [Microcystis aeruginosa DIANCHI905] >ARI84487.1 SufS [Microcystis aeruginosa PCC 7806SL])

HSP 1 Score: 551.2 bits (1419), Expect = 3.500e-153
Identity = 261/411 (63.50%), Postives = 324/411 (78.83%), Query Frame = 0

Query:  117 TLGDNLKADFPALHQDAYPGKPLVYLDSAATSQKPKQVLNAMSEYYEHSNANVHRGAHALSIRATEAYEATRDKVQNFIHASTREEIVFTRGATEAINLVANTWGIQNLKAGDEILLTVMEHHSNLVPWQLIAKKTGAVIKFVGLDEEEGLDLPQFHSLLSSKTKLVAFPHVSNTLGCILPVAEMAAAAHAVGALVLVDACQSIPHMKVDVQALDVDFLAASSHKMCGPTGAGFLYGKLGVLKQMPPWHGGGEMIDEVFFEYSTFAEPPARFEAGTPPIAEVVGMGAACDYLMEVGMEKVEEHEHQLGKYLYERLSEVEGVRIYGPPPGKEGKGRAALASFNTDQVHASDLAFFLDHEGVAIRSGHHCTQPLHRMLHAKGSLRASLYVYNTKGDIDVFIARLKETMEFFGN 528
            TL   ++ADFP LHQ  +  KPL+YLDSAATSQKP QVL  +  YYE  NANVHRGAH LS+RATEAYE  RDKV  FI+A++R+EIV+TR ATEAINLVA +W +  LKAGDEI+L+VMEHHSNL+PWQ++ +KTGAVIK+V L  +E  DL Q+ SLLS KTKLVA  HVSNTLGCI PVAE+ + AH VGA VL+DACQS+PH+ +DVQ++D D+L AS HKMC PTG GFLYGK  +L+ MPP+ GGGEMI EV+ ++ T AE P +FEAGTP I E + +GAA +YLM +GM+ +  +E +L  YL+++L E+EG+RIYGPPP   G+GRA+LA+FN + +HASDLA  LDHEG+AIRSGHHCTQPLHR+  A GS RASLY YNT+ +ID FI  L+ET++FF N
Sbjct:    8 TLAQKVRADFPILHQTVH-DKPLIYLDSAATSQKPIQVLETLRNYYEKDNANVHRGAHTLSVRATEAYEGARDKVARFINAASRQEIVYTRNATEAINLVAYSWALNTLKAGDEIILSVMEHHSNLIPWQIVCQKTGAVIKYVQLTSDESFDLEQYKSLLSEKTKLVAVLHVSNTLGCINPVAEIVSLAHQVGAKVLIDACQSVPHLAIDVQSIDCDWLVASGHKMCAPTGIGFLYGKEAILEAMPPFFGGGEMIAEVYLDHFTCAELPHKFEAGTPAIGEAIALGAAVEYLMGLGMDNIHAYEEELTAYLFKKLGEIEGLRIYGPPPSLTGQGRASLAAFNVEGIHASDLATLLDHEGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTREEIDSFIVALQETIDFFAN 417

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BLAST of NO07G03240 vs. NCBI_GenBank
Match: WP_052277067.1 (SufS family cysteine desulfurase [Microcystis aeruginosa] >AKV68838.1 Cysteine desulfurase [Microcystis panniformis FACHB-1757])

HSP 1 Score: 549.7 bits (1415), Expect = 1.000e-152
Identity = 261/411 (63.50%), Postives = 324/411 (78.83%), Query Frame = 0

Query:  117 TLGDNLKADFPALHQDAYPGKPLVYLDSAATSQKPKQVLNAMSEYYEHSNANVHRGAHALSIRATEAYEATRDKVQNFIHASTREEIVFTRGATEAINLVANTWGIQNLKAGDEILLTVMEHHSNLVPWQLIAKKTGAVIKFVGLDEEEGLDLPQFHSLLSSKTKLVAFPHVSNTLGCILPVAEMAAAAHAVGALVLVDACQSIPHMKVDVQALDVDFLAASSHKMCGPTGAGFLYGKLGVLKQMPPWHGGGEMIDEVFFEYSTFAEPPARFEAGTPPIAEVVGMGAACDYLMEVGMEKVEEHEHQLGKYLYERLSEVEGVRIYGPPPGKEGKGRAALASFNTDQVHASDLAFFLDHEGVAIRSGHHCTQPLHRMLHAKGSLRASLYVYNTKGDIDVFIARLKETMEFFGN 528
            TL   ++ADFP LHQ  +  KPL+YLDSAATSQKP QVL  +  YYE  NANVHRGAH LS+RATEAYE  RDKV  FI+A++R+EIV+TR ATEAINLVA +W +  LKAGDEI+L+VMEHHSNL+PWQ++ +KTGAVIK+V L  EE  DL Q+ SLLS KTKLVA  HVSNTLGCI PVAE+ + AH VGA VL+DACQS+PH+ +DVQ++D D+L AS HKMC PTG GFLYGK  +L+ MPP+ GGGEMI EV+ ++ T AE P +FEAGTP I E + +GAA +YLM +GM+ +  +E +L  +L+++L E+EG+RIYGPPP   G+GRA+LA+FN + +HASDLA  LDHEG+AIRSGHHCTQPLHR+  A GS RASLY YNT+ +ID FI  L+ET++FF N
Sbjct:    8 TLAQKVRADFPILHQTVH-DKPLIYLDSAATSQKPIQVLETLRNYYEKDNANVHRGAHTLSVRATEAYEGARDKVARFINAASRQEIVYTRNATEAINLVAYSWALNTLKAGDEIILSVMEHHSNLIPWQIVCQKTGAVIKYVQLTSEESFDLEQYKSLLSDKTKLVAVLHVSNTLGCINPVAEIVSLAHQVGAKVLIDACQSVPHLALDVQSIDCDWLVASGHKMCAPTGIGFLYGKEAILEAMPPFFGGGEMIAEVYLDHFTCAELPHKFEAGTPAIGEAIALGAAVEYLMGLGMDNIHAYEEELTAHLFKKLGEIEGLRIYGPPPSLTGQGRASLAAFNVEGIHASDLATLLDHEGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTREEIDSFIVALQETIDFFAN 417

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BLAST of NO07G03240 vs. NCBI_GenBank
Match: WP_002795097.1 (SufS family cysteine desulfurase [Microcystis aeruginosa] >CCI27752.1 cysteine desulfurase [Microcystis aeruginosa PCC 9808])

HSP 1 Score: 549.3 bits (1414), Expect = 1.300e-152
Identity = 260/411 (63.26%), Postives = 324/411 (78.83%), Query Frame = 0

Query:  117 TLGDNLKADFPALHQDAYPGKPLVYLDSAATSQKPKQVLNAMSEYYEHSNANVHRGAHALSIRATEAYEATRDKVQNFIHASTREEIVFTRGATEAINLVANTWGIQNLKAGDEILLTVMEHHSNLVPWQLIAKKTGAVIKFVGLDEEEGLDLPQFHSLLSSKTKLVAFPHVSNTLGCILPVAEMAAAAHAVGALVLVDACQSIPHMKVDVQALDVDFLAASSHKMCGPTGAGFLYGKLGVLKQMPPWHGGGEMIDEVFFEYSTFAEPPARFEAGTPPIAEVVGMGAACDYLMEVGMEKVEEHEHQLGKYLYERLSEVEGVRIYGPPPGKEGKGRAALASFNTDQVHASDLAFFLDHEGVAIRSGHHCTQPLHRMLHAKGSLRASLYVYNTKGDIDVFIARLKETMEFFGN 528
            TL   ++ADFP LHQ  +  KPL+YLDSAATSQKP QVL  +  YYE  NANVHRGAH LS+RATEAYE  RDKV  FI+A++R+EIV+TR ATEAINLVA +W +  LKAGDEI+L+VMEHHSNL+PWQ++ +KTGAVIK+V L  +E  DL Q+ SLLS KTKLVA  HVSNTLGCI PVAE+ + AH VGA VL+DACQS+PH+ +DVQ++D D+L AS HKMC PTG GFLYGK  +L+ MPP+ GGGEMI EV+ ++ T AE P +FEAGTP I E + +GAA +YLM +GM+ +  +E +L  +L+++L E+EG+RIYGPPP   G+GRA+LA+FN + +HASDLA  LDHEG+AIRSGHHCTQPLHR+  A GS RASLY YNT+ +ID FI  L+ET++FF N
Sbjct:    8 TLAQKVRADFPILHQTVH-DKPLIYLDSAATSQKPIQVLETLRNYYEKDNANVHRGAHTLSVRATEAYEGARDKVARFINAASRQEIVYTRNATEAINLVAYSWALNTLKAGDEIILSVMEHHSNLIPWQIVCQKTGAVIKYVQLTSDESFDLEQYKSLLSDKTKLVAVLHVSNTLGCINPVAEIVSLAHQVGAKVLIDACQSVPHLAIDVQSIDCDWLVASGHKMCAPTGIGFLYGKEAILEAMPPFFGGGEMIAEVYLDHFTCAELPHKFEAGTPAIGEAIALGAAVEYLMGLGMDNIHAYEEELTAHLFKKLGEIEGLRIYGPPPSLTGQGRASLAAFNVEGIHASDLATLLDHEGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTREEIDSFIVALQETIDFFAN 417

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BLAST of NO07G03240 vs. NCBI_GenBank
Match: WP_104396678.1 (SufS family cysteine desulfurase [Microcystis aeruginosa] >GBE74729.1 cysteine desulfurase [Microcystis aeruginosa NIES-87])

HSP 1 Score: 549.3 bits (1414), Expect = 1.300e-152
Identity = 261/411 (63.50%), Postives = 323/411 (78.59%), Query Frame = 0

Query:  117 TLGDNLKADFPALHQDAYPGKPLVYLDSAATSQKPKQVLNAMSEYYEHSNANVHRGAHALSIRATEAYEATRDKVQNFIHASTREEIVFTRGATEAINLVANTWGIQNLKAGDEILLTVMEHHSNLVPWQLIAKKTGAVIKFVGLDEEEGLDLPQFHSLLSSKTKLVAFPHVSNTLGCILPVAEMAAAAHAVGALVLVDACQSIPHMKVDVQALDVDFLAASSHKMCGPTGAGFLYGKLGVLKQMPPWHGGGEMIDEVFFEYSTFAEPPARFEAGTPPIAEVVGMGAACDYLMEVGMEKVEEHEHQLGKYLYERLSEVEGVRIYGPPPGKEGKGRAALASFNTDQVHASDLAFFLDHEGVAIRSGHHCTQPLHRMLHAKGSLRASLYVYNTKGDIDVFIARLKETMEFFGN 528
            TL   ++ADFP LHQ  +  KPL+YLDSAATSQKP QVL  +  YYE  NANVHRGAH LS+RATEAYE  RDKV  FI+A++R+EIV+TR ATEAINLVA +W +  LKAGDEI+L+VMEHHSNL+PWQ++ +KTGAVIK+V L  EE  DL Q+ SLLS KTKLVA  HVSNTLGCI PVAE+ + AH VGA VL+DACQS+PH+ +DVQ++D D+L AS HKMC PTG GFLYGK  +L+ MPP+ GGGEMI EV+ ++ T AE P +FEAGTP I E + +GAA +YLM +GM+ +  +E +L  YL+++L E+EG+RIYGP P   G+GRA+LA+FN + +HASDLA  LDHEG+AIRSGHHCTQPLHR+  A GS RASLY YNT+ +ID FI  L+ET++FF N
Sbjct:    8 TLAQKVRADFPILHQTVH-DKPLIYLDSAATSQKPIQVLETLRNYYEKDNANVHRGAHTLSVRATEAYEGARDKVARFINAASRQEIVYTRNATEAINLVAYSWALNTLKAGDEIILSVMEHHSNLIPWQIVCQKTGAVIKYVQLTSEESFDLEQYKSLLSDKTKLVAVLHVSNTLGCINPVAEIVSLAHQVGAKVLIDACQSVPHLAIDVQSIDCDWLVASGHKMCAPTGIGFLYGKEAILEAMPPFFGGGEMIAEVYLDHFTCAELPHKFEAGTPAIGEAIALGAAVEYLMGLGMDNIHAYEEELTAYLFKKLGEIEGLRIYGPSPSLTGQGRASLAAFNVEGIHASDLATLLDHEGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTREEIDSFIVALQETIDFFAN 417

[Close]

BLAST of NO07G03240 vs. NCBI_GenBank
Match: WP_045360217.1 (SufS family cysteine desulfurase [Microcystis aeruginosa] >GAL94235.1 cysteine desulfurase [Microcystis aeruginosa NIES-44])

HSP 1 Score: 548.5 bits (1412), Expect = 2.300e-152
Identity = 260/411 (63.26%), Postives = 324/411 (78.83%), Query Frame = 0

Query:  117 TLGDNLKADFPALHQDAYPGKPLVYLDSAATSQKPKQVLNAMSEYYEHSNANVHRGAHALSIRATEAYEATRDKVQNFIHASTREEIVFTRGATEAINLVANTWGIQNLKAGDEILLTVMEHHSNLVPWQLIAKKTGAVIKFVGLDEEEGLDLPQFHSLLSSKTKLVAFPHVSNTLGCILPVAEMAAAAHAVGALVLVDACQSIPHMKVDVQALDVDFLAASSHKMCGPTGAGFLYGKLGVLKQMPPWHGGGEMIDEVFFEYSTFAEPPARFEAGTPPIAEVVGMGAACDYLMEVGMEKVEEHEHQLGKYLYERLSEVEGVRIYGPPPGKEGKGRAALASFNTDQVHASDLAFFLDHEGVAIRSGHHCTQPLHRMLHAKGSLRASLYVYNTKGDIDVFIARLKETMEFFGN 528
            TL   ++ADFP LHQ  +  KPL+YLDSAATSQKP QVL  +  YYE  NANVHRGAH LS+RATEAYE  RDKV  FI+A++R+EIV+TR ATEAINLVA +W +  LKAGDEI+L+VMEHHSNL+PWQ++ +KTGAVIK+V L  EE  DL Q+ SLLS KTKLVA  HVSNTLGCI PVAE+ + AH VGA VL+DACQS+PH+ +DVQ++D D+L AS HKMC PTG GFLYGK  +L+ MPP+ GGGEMI EV+ ++ T AE P +FEAGTP I E + +GAA +YLM +GM+ +  +E +L  +L+++L E+EG+RIYGPPP   G+GRA+LA+FN + +HASDLA  LDHEG+AIRSGHHCTQPLHR+  A GS RASLY YNT+ +I+ FI  L+ET++FF N
Sbjct:    8 TLAQKVRADFPILHQTVH-DKPLIYLDSAATSQKPIQVLETLRNYYEKDNANVHRGAHTLSVRATEAYEGARDKVARFINAASRQEIVYTRNATEAINLVAYSWALNTLKAGDEIILSVMEHHSNLIPWQIVCQKTGAVIKYVQLTSEESFDLEQYKSLLSDKTKLVAVLHVSNTLGCINPVAEIVSLAHQVGAKVLIDACQSVPHLAIDVQSIDCDWLVASGHKMCAPTGIGFLYGKEAILEAMPPFFGGGEMIAEVYLDHFTCAELPHKFEAGTPAIGEAIALGAAVEYLMGLGMDNIHAYEEELTAHLFKKLGEIEGLRIYGPPPSLTGQGRASLAAFNVEGIHASDLATLLDHEGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTREEIERFIVALQETIDFFAN 417

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BLAST of NO07G03240 vs. NCBI_GenBank
Match: WP_016514409.1 (SufS family cysteine desulfurase [Microcystis aeruginosa] >EPF17976.1 putative cysteine desulfurase [Microcystis aeruginosa SPC777] >EPF24724.1 putative cysteine desulfurase [Microcystis aeruginosa SPC777] >OCY12150.1 cysteine desulfurase [Microcystis aeruginosa CACIAM 03])

HSP 1 Score: 548.1 bits (1411), Expect = 3.000e-152
Identity = 260/411 (63.26%), Postives = 323/411 (78.59%), Query Frame = 0

Query:  117 TLGDNLKADFPALHQDAYPGKPLVYLDSAATSQKPKQVLNAMSEYYEHSNANVHRGAHALSIRATEAYEATRDKVQNFIHASTREEIVFTRGATEAINLVANTWGIQNLKAGDEILLTVMEHHSNLVPWQLIAKKTGAVIKFVGLDEEEGLDLPQFHSLLSSKTKLVAFPHVSNTLGCILPVAEMAAAAHAVGALVLVDACQSIPHMKVDVQALDVDFLAASSHKMCGPTGAGFLYGKLGVLKQMPPWHGGGEMIDEVFFEYSTFAEPPARFEAGTPPIAEVVGMGAACDYLMEVGMEKVEEHEHQLGKYLYERLSEVEGVRIYGPPPGKEGKGRAALASFNTDQVHASDLAFFLDHEGVAIRSGHHCTQPLHRMLHAKGSLRASLYVYNTKGDIDVFIARLKETMEFFGN 528
            TL   ++ADFP LHQ  +  KPL+YLDSAATSQKP QVL  +  YYE  NANVHRGAH LS+RATEAYE  RDKV  FI+A++R+EIV+TR ATEAINLVA +W +  LKAGDEI+L+VMEHHSNL+PWQ++ +KTGAVIK+V L  +E  DL Q+ SLLS KTKLVA  HVSNTLGCI PVAE+ + AH VGA VL+DACQS+PH+ +DVQ++D D+L AS HKMC PTG GFLYGK  +L+ MPP+ GGGEMI EV+ ++ T AE P +FEAGTP I E + +GAA +YLM +GM+ +  +E +L  YL+++L E+EG+RIYGP P   G+GRA+LA+FN + +HASDLA  LDHEG+AIRSGHHCTQPLHR+  A GS RASLY YNT+ +ID FI  L+ET++FF N
Sbjct:    8 TLAQKVRADFPILHQTVH-DKPLIYLDSAATSQKPIQVLETLRNYYEKDNANVHRGAHTLSVRATEAYEGARDKVARFINAASRQEIVYTRNATEAINLVAYSWALNTLKAGDEIILSVMEHHSNLIPWQIVCQKTGAVIKYVQLTSDESFDLEQYKSLLSEKTKLVAVLHVSNTLGCINPVAEIVSLAHQVGAKVLIDACQSVPHLAIDVQSIDCDWLVASGHKMCAPTGIGFLYGKEAILEAMPPFFGGGEMIAEVYLDHFTCAELPHKFEAGTPAIGEAIALGAAVEYLMGLGMDNIHAYEEELTAYLFKKLGEIEGLRIYGPSPSLTGQGRASLAAFNVEGIHASDLATLLDHEGIAIRSGHHCTQPLHRLFDASGSARASLYFYNTREEIDSFIVALQETIDFFAN 417

The following BLAST results are available for this feature:

BLAST of NO07G03240 vs. NCBI_GenBank

BLAST of NO07G03240 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM27067.1	2.000e-209	84.16	cysteine subfamily [Nannochloropsis gaditana]	[more]
CBJ27325.1	3.500e-161	65.87	Cysteine desulfurase [Ectocarpus siliculosus]	[more]
WP_046660942.1	1.600e-153	63.75	SufS family cysteine desulfurase [Microcystis aeru...	[more]
WP_103113124.1	2.100e-153	63.50	SufS family cysteine desulfurase [Microcystis aeru...	[more]
WP_002747760.1	3.500e-153	63.50	SufS family cysteine desulfurase [Microcystis aeru...	[more]
WP_052277067.1	1.000e-152	63.50	SufS family cysteine desulfurase [Microcystis aeru...	[more]
WP_002795097.1	1.300e-152	63.26	SufS family cysteine desulfurase [Microcystis aeru...	[more]
WP_104396678.1	1.300e-152	63.50	SufS family cysteine desulfurase [Microcystis aeru...	[more]
WP_045360217.1	2.300e-152	63.26	SufS family cysteine desulfurase [Microcystis aeru...	[more]
WP_016514409.1	3.000e-152	63.26	SufS family cysteine desulfurase [Microcystis aeru...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL100	nonsL100	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR072	ncniR072	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR071	ncniR071	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR130	ngnoR130	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK000535	NSK000535	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO07G03240.1	NO07G03240.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|581086	gene_2657	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
NFS	gene3500	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO07G03240.1	NO07G03240.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO07G03240 ID=NO07G03240|Name=NO07G03240|organism=Nannochloropsis oceanica|type=gene|length=2207bp
AATCACAGGCCAACGCAGATCGGCTTTTCCCCTGCTCTTCAGAAATGCGG
AGGATATTTTCATCGAACGGCCGTAGCTGCACCGCAGCGCGTTTGCTGTT
GCTGTCGCTTCTGGCCGTGGAGTTGACGCATGCCTTTGTGGGTAAGGTTT
CCTTGGGCGAGGGCGACATTGGCAGCAGCCGGAGCAGCAGCTATGCCGGC
AGAAGACAGGAAACATGGCGCAATGCGCCCTTGTCCGCGGCGGCTGCGGC
TGCCACCTCAGgtaagggagggcgatcctcttctatgtttgtgggcaggg
agtgtgtgtcgagtgcacgtaatcctccgcatattagtgatgtagtcgat
taggccttgctgtgtgggaagaataccgctgttcgatcggtgttgccctg
gttgtactcgattgtgtctttctccaacagacaatttctttcagtgtaaa
ctaggaatgcatattcttgtacacgagagcattaagtgcatagttttttc
ttaaaaacttgtttcgcaatcatctctctctgcccctccttgactgttcc
tctctccccctaacagCCCGAGAAACCAGCACAACAACCCTCCTCAGCAC
CAGCACCAGCACCACCGCCACCAGAAGTAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCGGCAGCAGCAGCAGCAGCAGCATCACACTGCCTACTTCTACC
CTCGGCGATAATCTTAAAGCTGATTTTCCTGCGTTGCATCAGGATGCCTA
CCCAGGCAAACCCCTCGTCTATCTCGACTCGGCCGCCACCTCCCAAAAAC
CCAAACAGGTGCTGAATGCCATGTCCGAATATTATGAACACAGCAACGCC
AATGTCCATCGCGGTGCCCACGCCCTTTCCATCCGCGCAACAGAAGCTTA
CGAAGCCACAAGGGACAAGGTCCAAAACTTCATTCACGCCAGCACACGCG
AAGAGATCGTCTTTACGCGCGGCGCGACTGAGGCCATTAACCTTGTGGCC
AACACTTGGGGAATCCAGAATTTGAAAGCAGGAGATGAAATTTTATTGAC
AGTGATGGAGCACCATTCTAACCTGGTACCCTGGCAGTTGATCGCCAAAA
AGACGGGGGCTGTGATAAAGTTTGTGGGTTTGGATGAGGAGGAGGGATTG
GACCTGCCTCAATTTCACTCCTTGCTTTCAAGCAAGACCAAGCTGGTTGC
CTTCCCTCACGTTAGTAACACGCTCGGATGTATCTTGCCAGTGGCAGAGA
TGGCGGCTGCTGCACATGCTGTAGGTGCTCTTGTCCTGGTGGATGCCTGC
CAGAGCATTCCCCATATGAAGGTAGATGTGCAGGCGCTCGATGTCGATTT
TCTTGCAGCGAGCAGCCACAAGATGTGTGGCCCGACAGGGGCGGGATTCT
TGTACGGGAAATTGGGAGTGTTGAAGCAGATGCCACCGTGGCATGGGGGG
GGAGAAATGATTGATGAAGTCTTCTTCGAGTACTCGACCTTTGCAGAGCC
TCCGGCGAGATTCGAGGCGGGCACTCCCCCAATTGCCGAGGTCGTGGGTA
TGGGGGCGGCGTGTGATTACTTGATGGAAGTGGGGATGGAAAAGGTGGAG
GAGCATGAGCATCAATTGGGAAAGTATTTGTATGAGCGGTTGAGTGAAGT
GGAAGGGGTGAGAATATATGGTCCGCCGCCGGGTAAGGAGGGGAAGGGAA
GGGCGGCGTTGGCCTCGTTTAATACGGACCAGGTGCATGCGAGTGATTTG
GCGTTTTTCTTGGACCACGAGGGAGTGGCAATTCGTTCGGGCCATCACTG
CACGCAGCCTCTGCATCGGATGCTGCACGCCAAAGGCAGCCTGAGGGCGA
GCCTTTATGTGTACAATACGAAGGGGGATATCGATGTTTTTATCGCCAGA
TTGAAGGAGACAATGGAGTTTTTTGGAAACTTTCAGAGTGGAGGGGCGGG
GGCAGCGACGATTTTGTAGGTTGTAGAAGAAACAAAGATGGGGAGGAGTC
TTGAGATGCGGCAGAGAAATGTGATGAAATGATCAAGAACTATGAGAGGT
GAAGAAGTAGTAGTATGAGATTGATCGATCGATGATGAATGGGCAGCAAG
AGCAAGAGGAGAGTACCGCTAGGTCGCACAAGGAAGAAAAGAAAAGAAAT
CACGCCAACGAGTGCCGTTATCAGGCGAGTAAGCGAGCGGGGACATGTGC
ATGCGAA

protein sequence of NO07G03240.1

>NO07G03240.1-protein ID=NO07G03240.1-protein|Name=NO07G03240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=540bp
MRRIFSSNGRSCTAARLLLLSLLAVELTHAFVGKVSLGEGDIGSSRSSSY
AGRRQETWRNAPLSAAAAAATSARETSTTTLLSTSTSTTATRSSSSSSSS
SSSGSSSSSSITLPTSTLGDNLKADFPALHQDAYPGKPLVYLDSAATSQK
PKQVLNAMSEYYEHSNANVHRGAHALSIRATEAYEATRDKVQNFIHASTR
EEIVFTRGATEAINLVANTWGIQNLKAGDEILLTVMEHHSNLVPWQLIAK
KTGAVIKFVGLDEEEGLDLPQFHSLLSSKTKLVAFPHVSNTLGCILPVAE
MAAAAHAVGALVLVDACQSIPHMKVDVQALDVDFLAASSHKMCGPTGAGF
LYGKLGVLKQMPPWHGGGEMIDEVFFEYSTFAEPPARFEAGTPPIAEVVG
MGAACDYLMEVGMEKVEEHEHQLGKYLYERLSEVEGVRIYGPPPGKEGKG
RAALASFNTDQVHASDLAFFLDHEGVAIRSGHHCTQPLHRMLHAKGSLRA
SLYVYNTKGDIDVFIARLKETMEFFGNFQSGGAGAATIL*

Synonyms

Publications