NO07G03220, NO07G03220 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO07G03220 vs. NCBI_GenBank
Match: EWM27065.1 (hypothetical protein Naga_100056g28 [Nannochloropsis gaditana]) HSP 1 Score: 324.3 bits (830), Expect = 4.100e-85 Identity = 162/238 (68.07%), Postives = 187/238 (78.57%), Query Frame = 0 Query: 74 MRRLLLVCLGGLVGTTSYFLPFSFNQYAIARASELAVRKAQQQSITTKAHDLLNDLPELSDSRLAGWRLKKGGANPTADGEAGAVQAGQSVTAEESTVVKAARAVDPSLPQQYDVVEYPIPTHAHGLIENDGRVRGVGVLLSNNRDRLDANLLPADKVDLCQIEPLTLDPEGRY-EGQEG--LVVWQKDELEPRVFAAYSDLKKVKSKQNGMADKWRRWVLDEELTPGCGPPPGAEEE 309 MR L+ LGGLVG +SYFLPFSFNQYA ARA+E+A RKAQQQSI TKAHDLL+DLPEL+DSRLAGWRLKKG GE G S + E T R + PQQYDVVEYP+P+HAHG+++ D RVRGVGVLLSNNRDRLDA LPA+K+DLCQ+EPLTLDPEG++ G EG VW+KDELEPRVF AY+DL+K+ SKQNGMADKWRRW+L+E L+ GCGPPPGAEEE Sbjct: 1 MRNTFLLLLGGLVGVSSYFLPFSFNQYATARANEIATRKAQQQSIATKAHDLLDDLPELTDSRLAGWRLKKGA---HGSGETGVEGDSASAASMEDTQAIVDRGTESFSPQQYDVVEYPLPSHAHGILDGDDRVRGVGVLLSNNRDRLDAASLPAEKIDLCQVEPLTLDPEGQWGSGLEGGEQQVWRKDELEPRVFVAYADLRKITSKQNGMADKWRRWILEEPLSEGCGPPPGAEEE 235
BLAST of NO07G03220 vs. NCBI_GenBank
Match: CBN78732.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 107.1 bits (266), Expect = 1.000e-19 Identity = 68/176 (38.64%), Postives = 94/176 (53.41%), Query Frame = 0 Query: 128 DLPELSDSRLAGWRLKKGGANPTADGEAGAVQAGQSVTAEESTVVKAARAVDPSLPQQYDVVEYPIPTHAHGLIEN---DGRVRGVGVLLSNNRDRLDANLLPADKVDLCQIEPLTLDPEGRYEGQEGLVVWQKDELEPRVFAAYSDLKKVKSKQNGMADKWRRWVLDEELTPGCG 301 D+P ++DSRLAGWR+ A TA + AV +S A + P DVVEYP+ L++N DGR +GV V++S N+ R DA LP D +D +++ L D + EG VW DELE FA ++K +KS NG DKW+RW + +EL+ GCG Sbjct: 67 DVPGIADSRLAGWRVGSKQAATTATEDTAAV---------DSDADSEGGAGESGEPGCGDVVEYPLT----DLVKNESTDGREKGVAVIVSINKLRNDAWKLPEDILDKAELQVLCPDLDSEEEG-----VWMADELETCAFAKLGEMKVLKSSFNGAMDKWKRWTISDELSEGCG 224
BLAST of NO07G03220 vs. NCBI_GenBank
Match: GAQ85839.1 (DnaJ heat shock family protein [Klebsormidium nitens]) HSP 1 Score: 82.0 bits (201), Expect = 3.500e-12 Identity = 48/131 (36.64%), Postives = 75/131 (57.25%), Query Frame = 0 Query: 180 PSLPQQYDVVEYPIPTHAHGLIENDGRVRGVGVLLSNNRDRLDANLLPADKVDLCQIEPLTLDPEGRYEGQEGLVVWQKDELEPRVFAAYSDLKKVKSKQNGMADKWRRWVLDEELTPGCGPPPGAEEEIM 311 P+ Q DVVE+P+ T A + NDGR +GVG ++ N DR D + L + + LC++E L ++G W D +E FA +L+ ++S+ + ++D W+ +LD EL+PGCG P AEE I+ Sbjct: 147 PTFAQNGDVVEFPLSTAARERM-NDGREKGVGFIVGRNIDRGDKHKLSPENLTLCEVEVLW--------QEDGDDRWTVDPMESSAFADLLELRVLRSEFDRLSDSWK--ILD-ELSPGCGSPQYAEEVIL 265
BLAST of NO07G03220 vs. NCBI_GenBank
Match: XP_005648443.1 (DnaJ-domain-containing protein [Coccomyxa subellipsoidea C-169] >EIE23899.1 DnaJ-domain-containing protein [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 79.7 bits (195), Expect = 1.800e-11 Identity = 51/137 (37.23%), Postives = 72/137 (52.55%), Query Frame = 0 Query: 175 ARAVDPSLPQQYDVVEYPIPTHAHGLIENDGRVRGVGVLLSNNRDRLDANLLPADKVDLCQIEPLTLDPEGRYEGQEGLVVWQKDELEPRVFAAYSDLKKVKSKQNGMADKWRRWVLDEELTPGCGPPPGAEEEIMM 312 A+ D LPQ DVVEYP+ ++ DGR GVG+++ N DR DA LP D++DLC+IEPL + G W D+L FA +L+K+ ++ WV++ L+ GCG P EEIM+ Sbjct: 260 AQVADDGLPQFGDVVEYPLREIEMRELQ-DGRTAGVGLVVGRNMDRGDAKKLPPDQLDLCEIEPLRQEETGSER-------WFPDDLGIPSFARLGELRKLPVLD--YDGRYDIWVINAPLSEGCGGPE-LPEEIML 385
BLAST of NO07G03220 vs. NCBI_GenBank
Match: XP_024361532.1 (uncharacterized protein LOC112275399 [Physcomitrella patens] >PNR30376.1 hypothetical protein PHYPA_026692 [Physcomitrella patens]) HSP 1 Score: 74.3 bits (181), Expect = 7.400e-10 Identity = 53/170 (31.18%), Postives = 87/170 (51.18%), Query Frame = 0 Query: 141 RLKKGGANPTADGEAGAVQAGQSVTAEESTVVKAARAVDPSLPQQYDVVEYPIPTHAHGLIENDGRVRGVGVLLSNNRDRLDANLLPADKVDLCQIEPLTLDPEGRYEGQEGLVVWQKDELEPRVFAAYSDLKKVKSKQNGMADKWRRWVLDEELTPGCGPPPGAEEEIM 311 + +KG A +A A ++G + T E V A Q DVVEYP+ + A D R++GVG+++S N DR D + L + + L +IEPL +P VW+ D +E FA+ DL+ ++++ N + D+ W++ ++L+ C P AEE I+ Sbjct: 116 KTRKGDARSSA-----AARSGSTYTPENGESVCGTEA------QNGDVVEYPL-SDAIKAQHQDDRLKGVGLVVSRNIDRGDRDKLSVENLTLVEIEPLYREPNSS--------VWRADPMEGAAFASLPDLRILRTEFNRVTDE---WIVLDDLSLDCDSPTYAEEIIL 262
BLAST of NO07G03220 vs. NCBI_GenBank
Match: PTQ48234.1 (hypothetical protein MARPO_0006s0238 [Marchantia polymorpha]) HSP 1 Score: 73.6 bits (179), Expect = 1.300e-9 Identity = 45/124 (36.29%), Postives = 67/124 (54.03%), Query Frame = 0 Query: 187 DVVEYPIPTHAHGLIENDGRVRGVGVLLSNNRDRLDANLLPADKVDLCQIEPLTLDPEGRYEGQEGLVVWQKDELEPRVFAAYSDLKKVKSKQNGMADKWRRWVLDEELTPGCGPPPGAEEEIM 311 DVVEY + A DGR++GVG+++S N DR D + LP + VDL ++EPL + + W+ D +E FA+ L+ ++S D WR + +EL+P CG P AEE I+ Sbjct: 159 DVVEYYLSDAAKAQ-HQDGRLKGVGLVVSRNIDRGDRHKLPLECVDLVELEPLYKEVD--------CEEWRADPMEGPAFASMPTLRILRSDYERTPDFWR---IHDELSPDCGSPEYAEEVIL 270
BLAST of NO07G03220 vs. NCBI_GenBank
Match: PRW59130.1 (dnaJ-like protein subfamily B member 5-like [Chlorella sorokiniana]) HSP 1 Score: 72.8 bits (177), Expect = 2.100e-9 Identity = 43/123 (34.96%), Postives = 60/123 (48.78%), Query Frame = 0 Query: 188 VVEYPIPTHAHGLIENDGRVRGVGVLLSNNRDRLDANLLPADKVDLCQIEPLTLDPEGRYEGQEGLVVWQKDELEPRVFAAYSDLKKVKSKQNGMADKWRRWVLDEELTPGCGPPPGAEEEIM 311 VVEYP+ ++ DGR GVG+L+ N DR DA LP +DLC+IEPL + + G W DEL P F L+ + + ++ W + L+ GCG P EE I+ Sbjct: 266 VVEYPLSQQQRDELQ-DGRTHGVGLLVGRNCDRGDAAKLPQQVLDLCEIEPLR-------QEEPGSTRWVPDELAPAAFPRLGGLRPI--PVDAFDQRFDVWTITAPLSEGCGGPELPEEVIL 378
BLAST of NO07G03220 vs. NCBI_GenBank
Match: PSC75282.1 (chaperone -like [Micractinium conductrix]) HSP 1 Score: 65.1 bits (157), Expect = 4.500e-7 Identity = 35/92 (38.04%), Postives = 48/92 (52.17%), Query Frame = 0 Query: 182 LPQQYDVVEYPIPTHAHGLIENDGRVRGVGVLLSNNRDRLDANLLPADKVDLCQIEPLTLDPEGRYEGQEGLVVWQKDELEPRVFAAYSDLK 274 LP VVEYP+P ++ DGR GVG+L+ N DR DA LP + +DLC++EPL + G W DEL P + +L+ Sbjct: 388 LPTAGTVVEYPLPAVVQAELQ-DGRSHGVGLLVGRNCDRGDARRLPEEALDLCEVEPLRQEEAGSDR-------WVPDELSPSAYVRLGELR 471 The following BLAST results are available for this feature:
BLAST of NO07G03220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 8
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G03220 ID=NO07G03220|Name=NO07G03220|organism=Nannochloropsis oceanica|type=gene|length=1856bpback to top protein sequence of NO07G03220.1 >NO07G03220.1-protein ID=NO07G03220.1-protein|Name=NO07G03220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=313bpback to top Synonyms
Publications
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