NO07G03140, NO07G03140 (gene) Nannochloropsis oceanica

Overview
NameNO07G03140
Unique NameNO07G03140
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length810
Alignment locationchr7:872920..873729 -

Link to JBrowse

Properties
Property NameValue
DescriptionDihydro-8-oxoguanine triphosphatase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:872920..873729 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:00084138-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006950response to stress
GO:0006259DNA metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR015797NUDIX_hydrolase_dom-like
IPR000086NUDIX_hydrolase_dom
IPR003563OxG-triPHTase
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO07G03140 vs. NCBI_GenBank
Match: XP_021350534.1 (7,8-dihydro-8-oxoguanine triphosphatase-like [Mizuhopecten yessoensis] >XP_021350535.1 7,8-dihydro-8-oxoguanine triphosphatase-like [Mizuhopecten yessoensis] >XP_021350536.1 7,8-dihydro-8-oxoguanine triphosphatase-like [Mizuhopecten yessoensis] >OWF51812.1 7,8-dihydro-8-oxoguanine triphosphatase [Mizuhopecten yessoensis])

HSP 1 Score: 158.7 bits (400), Expect = 2.600e-35
Identity = 79/160 (49.38%), Postives = 109/160 (68.12%), Query Frame = 0
Query:  105 VKTKVLTLLFVRRANPTSGVKEVLLGMKKRGFGIGKWNGFGGKVEPGETIEAAALRELEEESCVKASGVELRGKITFTFLTIPEVLKVSVFEAVGPMTGEPQETEEMKPQWYAESDIPFEKMWADDKYWVPLFLEGKRFRALFEFDDESTIVRYDLDTLK 265
            V  K+LTL+ +R+A        +LLGMKKRGFG+G+WNGFGGKVEPGETI+AAA REL EESC+  + ++  G + F FL  P++ +V VF +     GE +ETEEM+PQW+ E  IPF++MW DD  W P FL GK+F     F+    +V+YD++ ++
Sbjct:    2 VANKLLTLVLLRQA------PRILLGMKKRGFGVGRWNGFGGKVEPGETIKAAARRELLEESCLVCNDLKEVGLLKFEFLGNPQIWEVHVFTS-NNFEGEAKETEEMRPQWFEEKSIPFDQMWPDDILWFPHFLNGKKFSGYIVFEGMDKMVKYDVEEVE 154          
BLAST of NO07G03140 vs. NCBI_GenBank
Match: KKT22187.1 (7,8-dihydro-8-oxoguanine triphosphatase [Parcubacteria group bacterium GW2011_GWE1_43_8])

HSP 1 Score: 158.3 bits (399), Expect = 3.300e-35
Identity = 76/143 (53.15%), Postives = 101/143 (70.63%), Query Frame = 0
Query:  126 EVLLGMKKRGFGIGKWNGFGGKVEPGETIEAAALRELEEESCVKASGVELRGKITFTFLTIPEVLKVSVFEAVGPMTGEPQETEEMKPQWYAESDIPFEKMWADDKYWVPLFLEGKRFRALFEFDDESTIVRYDLDTLKEGEE 269
            +VLLGMKKRGFG G+WNGFGGKVE  E IE AA RE+ EE+ +K   +E  G I F F   PE+L+V +F+     +GEP E+EEMKPQW+  S IPF+ MW+DD YW+PLFL GK+F+  F FD+  T+++++L  +K   E
Sbjct:   15 KVLLGMKKRGFGSGRWNGFGGKVEKDEKIEEAAKREIFEEAGIKVKELEKVGIIDFEFKGNPEILEVHIFKG-HDYSGEPTESEEMKPQWFQISSIPFQDMWSDDIYWLPLFLAGKKFKGYFLFDESDTVIKHELSEVKSLSE 156          
BLAST of NO07G03140 vs. NCBI_GenBank
Match: XP_012786080.1 (PREDICTED: 7,8-dihydro-8-oxoguanine triphosphatase [Ochotona princeps])

HSP 1 Score: 158.3 bits (399), Expect = 3.300e-35
Identity = 74/141 (52.48%), Postives = 100/141 (70.92%), Query Frame = 0
Query:  127 VLLGMKKRGFGIGKWNGFGGKVEPGETIEAAALRELEEESCVKASGVELRGKITFTFLTIPEVLKVSVFEAVGPMTGEPQETEEMKPQWYAESDIPFEKMWADDKYWVPLFLEGKRFRALFEFDDESTIVRY---DLDTLK 265
            +LLGMKKRGFG G+WNGFGGKV+ GETIE  A REL+EES +    +   G ITF F+ +PE ++V +F +     G P ETEEM+PQW+ +  IPFE MW DDKYW+PL L+G++ R  F+F D+ TI+ +   ++DTL+
Sbjct:   18 ILLGMKKRGFGAGRWNGFGGKVQEGETIEEGAKRELQEESGLTVDSLHWVGHITFEFVAMPEQMEVHIF-STDSFQGTPVETEEMRPQWFQQDQIPFEDMWPDDKYWLPLLLQGRKLRGHFKFQDQHTILEHTLCEVDTLQ 157          
BLAST of NO07G03140 vs. NCBI_GenBank
Match: XP_020659948.1 (7,8-dihydro-8-oxoguanine triphosphatase [Pogona vitticeps])

HSP 1 Score: 158.3 bits (399), Expect = 3.300e-35
Identity = 84/163 (51.53%), Postives = 108/163 (66.26%), Query Frame = 0
Query:  107 TKVLTLLFVRRANPTSGVKEVLLGMKKRGFGIGKWNGFGGKVEPGETIEAAALRELEEESCVKASGVELRGKITFTFLTIPEVLKVSVFEAVGPMTGEPQETEEMKPQWYAESDIPFEKMWADDKYWVPLFLEGKRFRALFEFDDESTIVRYDLDTLKEGEEL 270
            TK+LTL+ V +       + VLLGMKKRGFG+G WNGFGGKV+PGETIE AA REL+EES +    +   G ITF F+   E+L+V +F A     GEP E+EEM+PQW+    +PF+ MW DD YW PL L+ K FR  F+F  + TI+ Y   TLKE E++
Sbjct:    4 TKLLTLVLVVQP------QRVLLGMKKRGFGVGLWNGFGGKVQPGETIEQAARRELQEESGLTVDTLHKVGLITFEFVGDTELLEVHIFRA-DSFRGEPTESEEMRPQWFELDQVPFKNMWPDDVYWFPLLLQKKLFRGYFKFQGQDTILEY---TLKEVEKI 156          
BLAST of NO07G03140 vs. NCBI_GenBank
Match: XP_011664223.1 (PREDICTED: 7,8-dihydro-8-oxoguanine triphosphatase [Strongylocentrotus purpuratus])

HSP 1 Score: 158.3 bits (399), Expect = 3.300e-35
Identity = 78/166 (46.99%), Postives = 109/166 (65.66%), Query Frame = 0
Query:  104 TVKTKVLTLLFVRRANPTSGVKEVLLGMKKRGFGIGKWNGFGGKVEPGETIEAAALRELEEESCVKASGVELRGKITFTFLTIPEVLKVSVFEAVGPMTGEPQETEEMKPQWYAESDIPFEKMWADDKYWVPLFLEGKRFRALFEFDDESTIVRYDLDTLKEGEEL 270
            +V  K+LTL+ + +         +LLGMKKRGFG+G+WNGFGGKV+PGETI   A REL EESCV+A  ++  G+I F F+  P++++V VF+A     GEP ETEEM+PQW+    IPF  MW DD  W PL L+G +F+  F+F+     + Y+L+ L +  E+
Sbjct:   43 SVPNKLLTLVLIHQNT------RLLLGMKKRGFGVGRWNGFGGKVQPGETILEGAERELLEESCVRAPDMKHIGRIDFEFVGEPQIMEVHVFKAT-EFEGEPAETEEMRPQWFDVDSIPFHTMWPDDVLWFPLMLKGSKFKGYFKFEGMDKYLEYNLEELDQSAEI 201          
BLAST of NO07G03140 vs. NCBI_GenBank
Match: PIR73728.1 (DNA mismatch repair protein MutT [Candidatus Moranbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_35_21] >PJA88695.1 DNA mismatch repair protein MutT [Candidatus Moranbacteria bacterium CG_4_9_14_3_um_filter_36_9])

HSP 1 Score: 158.3 bits (399), Expect = 3.300e-35
Identity = 73/139 (52.52%), Postives = 99/139 (71.22%), Query Frame = 0
Query:  126 EVLLGMKKRGFGIGKWNGFGGKVEPGETIEAAALRELEEESCVKASGVELRGKITFTFLTIPEVLKVSVFEAVGPMTGEPQETEEMKPQWYAESDIPFEKMWADDKYWVPLFLEGKRFRALFEFDDESTIVRYDLDTLK 265
            ++LL MKK+GFG G+WNGFGGKVEPGE IE AA RE+ EE+ +K   +E  G + F F   PE+L+V +F+A    +G P ETEEMKPQW+ E DIPF++MW+DDK+W+PLFL GK+F+  F F     ++ + L  +K
Sbjct:   11 KILLRMKKKGFGAGRWNGFGGKVEPGEKIEDAAKREIWEEAGIKVENLESVGTVEFEFQCNPEILEVHIFKAKS-FSGTPMETEEMKPQWFNEEDIPFDQMWSDDKFWMPLFLAGKKFKGRFLFGKGDRVLEHRLKKIK 148          
BLAST of NO07G03140 vs. NCBI_GenBank
Match: OGZ69871.1 (hypothetical protein A3D44_03155 [Candidatus Staskawiczbacteria bacterium RIFCSPHIGHO2_02_FULL_42_22])

HSP 1 Score: 157.9 bits (398), Expect = 4.400e-35
Identity = 77/153 (50.33%), Postives = 107/153 (69.93%), Query Frame = 0
Query:  108 KVLTLLFVRRANPTSGVKEVLLGMKKRGFGIGKWNGFGGKVEPGETIEAAALRELEEESCVKASGVELRGKITFTFLTIPEVLKVSVFEAVGPMTGEPQETEEMKPQWYAESDIPFEKMWADDKYWVPLFLEGKRFRALFEFDDESTIVRYDL 261
            K+LTLL +++ +      ++LLG+KK GFG+GKWNGFGGKV  GETIE AA REL EES +    +E  G + F +   PE+ +V++F+A     G+PQETEEM+P+W+   DIPFE MW DDK+W+PLFLE K+F+ +F F+  + I  Y+L
Sbjct:    3 KILTLLIIQKED------KILLGLKKHGFGMGKWNGFGGKVNKGETIEDAAQRELLEESGLVVQSMEKIGVLNFVWQGNPEIWEVNIFKA-HEFIGQPQETEEMRPRWFLLKDIPFEAMWPDDKHWLPLFLENKKFKGIFLFNQSNVIESYNL 148          
BLAST of NO07G03140 vs. NCBI_GenBank
Match: XP_013408505.1 (7,8-dihydro-8-oxoguanine triphosphatase [Lingula anatina] >XP_013408506.1 7,8-dihydro-8-oxoguanine triphosphatase [Lingula anatina])

HSP 1 Score: 157.1 bits (396), Expect = 7.500e-35
Identity = 83/165 (50.30%), Postives = 109/165 (66.06%), Query Frame = 0
Query:  105 VKTKVLTLLFVRRANPTSGVKEVLLGMKKRGFGIGKWNGFGGKVEPGETIEAAALRELEEESCVKASGVELRGKITFTFLTIPEVLKVSVFEAVGPMTGEPQETEEMKPQWYAESDIPFEKMWADDKYWVPLFLEGKRFRALFEFDDESTIVRYDLDTLKEGEEL 270
            V  K+LTL+ +R+ N       VLLG KK+GFG+G+WNGFGGKVE GETI+ AA REL EE  V+A  +E  G + F F+  P+ L+V VF A     GEP E+EEM+PQWY    IPF  MW DDKYW P+FL+G +F   F+F+  + I++ +   LKE E+L
Sbjct:    2 VANKLLTLVLIRQCN------RVLLGYKKKGFGVGRWNGFGGKVEQGETIQQAAARELHEECGVEAHSLEEIGLLKFEFVGDPQWLEVHVFTA-DTFKGEPTESEEMRPQWYNIHSIPFNDMWPDDKYWFPIFLKGAKFSGYFKFEGHNNILKTE---LKEVEKL 156          
BLAST of NO07G03140 vs. NCBI_GenBank
Match: OGG44207.1 (hypothetical protein A2841_04150 [Candidatus Kaiserbacteria bacterium RIFCSPHIGHO2_01_FULL_48_10])

HSP 1 Score: 157.1 bits (396), Expect = 7.500e-35
Identity = 76/138 (55.07%), Postives = 97/138 (70.29%), Query Frame = 0
Query:  127 VLLGMKKRGFGIGKWNGFGGKVEPGETIEAAALRELEEESCVKASGVELRGKITFTFLTIPEVLKVSVFEAVGPMTGEPQETEEMKPQWYAESDIPFEKMWADDKYWVPLFLEGKRFRALFEFDDESTIVRYDLDTLK 265
            VLLGMKK+GFG G+WNGFGGKV+ GETIE AA RE++EES +    +E  G I F F   PE+L+V +F A+    G P E+EEM+PQW+A  +IPF  MW DD YW PLFL+GK+FR  F FDD+  I+  +L  +K
Sbjct:   12 VLLGMKKKGFGAGRWNGFGGKVQSGETIEEAATREVKEESGLDVREIEKYGIIEFEFEGNPEILEVHIFRAI-DFEGSPAESEEMRPQWFAIDEIPFSHMWPDDIYWFPLFLKGKKFRGKFLFDDDHKILERELGEVK 148          
BLAST of NO07G03140 vs. NCBI_GenBank
Match: XP_008496773.1 (PREDICTED: 7,8-dihydro-8-oxoguanine triphosphatase [Calypte anna])

HSP 1 Score: 156.8 bits (395), Expect = 9.700e-35
Identity = 77/143 (53.85%), Postives = 101/143 (70.63%), Query Frame = 0
Query:  127 VLLGMKKRGFGIGKWNGFGGKVEPGETIEAAALRELEEESCVKASGVELRGKITFTFLTIPEVLKVSVFEAVGPMTGEPQETEEMKPQWYAESDIPFEKMWADDKYWVPLFLEGKRFRALFEFDDESTIVRYDLDTLKEGEEL 270
            VLLGMKKRGFG+G WNGFGGKV+PGE+IE AA REL EES +    ++  G+ITF F+  PE+++V +F A     GEP E+EEM+PQW+   ++PF  MWADD YW PL ++ K FR  F+F  + TI+ +   TLKE EE+
Sbjct:   18 VLLGMKKRGFGVGLWNGFGGKVQPGESIEEAARRELLEESGLTVDTLQKMGQITFEFVGNPELMEVHIFRA-DDFHGEPTESEEMRPQWFHLDEVPFNSMWADDIYWFPLVMQKKLFRGYFKFQGQDTILEH---TLKEVEEI 156          
The following BLAST results are available for this feature:
BLAST of NO07G03140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_021350534.12.600e-3549.387,8-dihydro-8-oxoguanine triphosphatase-like [Mizu... [more]
KKT22187.13.300e-3553.157,8-dihydro-8-oxoguanine triphosphatase [Parcubact... [more]
XP_012786080.13.300e-3552.48PREDICTED: 7,8-dihydro-8-oxoguanine triphosphatase... [more]
XP_020659948.13.300e-3551.537,8-dihydro-8-oxoguanine triphosphatase [Pogona vi... [more]
XP_011664223.13.300e-3546.99PREDICTED: 7,8-dihydro-8-oxoguanine triphosphatase... [more]
PIR73728.13.300e-3552.52DNA mismatch repair protein MutT [Candidatus Moran... [more]
OGZ69871.14.400e-3550.33hypothetical protein A3D44_03155 [Candidatus Stask... [more]
XP_013408505.17.500e-3550.307,8-dihydro-8-oxoguanine triphosphatase [Lingula a... [more]
OGG44207.17.500e-3555.07hypothetical protein A2841_04150 [Candidatus Kaise... [more]
XP_008496773.19.700e-3553.85PREDICTED: 7,8-dihydro-8-oxoguanine triphosphatase... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL100nonsL100Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR072ncniR072Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000545NSK000545Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G03140.1NO07G03140.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|581041gene_2646Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100056g36gene3489Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G03140.1NO07G03140.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G03140 ID=NO07G03140|Name=NO07G03140|organism=Nannochloropsis oceanica|type=gene|length=810bp
ATGTGGGGCGTCAGGAAGGCTTTCTTTATCTCCTCCATATCCGCTGCTTC
TGTTGCTGTTACTGCTCTTGCTTGTCGCATTCACACCACGACAACCTCCC
CCCGCTTTTGCTTCACCGCCCCCCCTCCAAGCTTCTCCTTGCCGCACTTG
TGTGACTTAAGGACCACAAGGACGACGGCATTACGTCTCGGTTTTGACTT
CACTGCCGCTGCTCAACCCTATTCCTCCTTCTTTCTCTCCCGCTCCGGTT
CGACCATCGCCACGAAGAGACACATGGCGGCAAGCAGCAGCACCACCATC
TCTCCGGCCACCGTGAAGACCAAGGTCCTCACTCTTCTCTTCGTACGGCG
CGCAAATCCCACTTCAGGGGTCAAGGAAGTCTTGCTAGGTATGAAAAAAC
GAGGATTTGGGATTGGGAAATGGAATGGCTTCGGTGGGAAAGTCGAGCCT
GGGGAGACAATCGAAGCCGCCGCCTTGCGAGAGCTCGAGGAAGAGTCGTG
CGTCAAGGCCAGCGGGGTGGAGCTACGAGGGAAGATAACGTTTACATTTC
TGACGATTCCCGAGGTGCTGAAAGTGAGTGTATTCGAGGCGGTGGGGCCA
ATGACGGGGGAGCCGCAAGAGACGGAGGAGATGAAGCCACAGTGGTATGC
AGAGAGTGACATTCCGTTTGAGAAAATGTGGGCAGACGACAAGTATTGGG
TACCATTATTTTTGGAAGGAAAGCGATTTAGGGCTTTGTTTGAGTTTGAT
GACGAGAGTACAATCGTGAGGTATGATTTGGATACGTTGAAGGAGGGTGA
AGAGTTGTGA
back to top

protein sequence of NO07G03140.1

>NO07G03140.1-protein ID=NO07G03140.1-protein|Name=NO07G03140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=270bp
MWGVRKAFFISSISAASVAVTALACRIHTTTTSPRFCFTAPPPSFSLPHL
CDLRTTRTTALRLGFDFTAAAQPYSSFFLSRSGSTIATKRHMAASSSTTI
SPATVKTKVLTLLFVRRANPTSGVKEVLLGMKKRGFGIGKWNGFGGKVEP
GETIEAAALRELEEESCVKASGVELRGKITFTFLTIPEVLKVSVFEAVGP
MTGEPQETEEMKPQWYAESDIPFEKMWADDKYWVPLFLEGKRFRALFEFD
DESTIVRYDLDTLKEGEEL*
back to top
Synonyms
Publications