NO07G03140, NO07G03140 (gene) Nannochloropsis oceanica

Overview
NameNO07G03140
Unique NameNO07G03140
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length810
Alignment locationchr7:872920..873729 -

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Properties
Property NameValue
DescriptionDihydro-8-oxoguanine triphosphatase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:872920..873729 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:00084138-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006950response to stress
GO:0006259DNA metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR015797NUDIX_hydrolase_dom-like
IPR000086NUDIX_hydrolase_dom
IPR003563OxG-triPHTase
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO07G03140 vs. NCBI_GenBank
Match: EWM27059.1 (dihydro-8-oxoguanine triphosphatase [Nannochloropsis gaditana])

HSP 1 Score: 298.1 bits (762), Expect = 2.700e-77
Identity = 149/190 (78.42%), Postives = 168/190 (88.42%), Query Frame = 0
Query:   80 SRSGSTIATKRHMAASSSTTISPATVKTKVLTLLFVRRANPTSGVKEVLLGMKKRGFGIGKWNGFGGKVEPGETIEAAALRELEEESCVKASGVELRGKITFTFLTIPEVLKVSVFEAVGPMTGEPQETEEMKPQWYAESDIPFEKMWADDKYWVPLFLEGKRFRALFEFDDESTIVRYDLDTLKEGEEL 270
            S   +T+  +R M ASSS  +   T+KTK+LTLLFVRRANPT+ VKEVLLGMKKRGFG GKWNGFGGKVE  ETI+AAALRELEEESC+KAS  ELRGKITFTFLTIPEVLKV VFEA+GP+ GEPQETEEMKPQWYAES+IP+EKMWADDKYW+PLFLEG+RF+ALFEFDDEST++RYDL T+ EGEEL
Sbjct:   87 STFATTLKAERRMKASSS--VPQPTLKTKLLTLLFVRRANPTTNVKEVLLGMKKRGFGQGKWNGFGGKVETNETIKAAALRELEEESCLKASDAELRGKITFTFLTIPEVLKVHVFEALGPIEGEPQETEEMKPQWYAESEIPYEKMWADDKYWLPLFLEGRRFKALFEFDDESTLLRYDLGTVPEGEEL 274          
BLAST of NO07G03140 vs. NCBI_GenBank
Match: CBN75609.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 168.7 bits (426), Expect = 2.500e-38
Identity = 90/190 (47.37%), Postives = 121/190 (63.68%), Query Frame = 0
Query:   96 SSTTISPATVKTKVLTLLFVRRANPTSGV------------------KEVLLGMKKRGFGIGKWNGFGGKVEPGETIEAAALRELEEESCVKASGVELRGKITFTFLTIPEVLKVSVFEAVGPMTGEPQETEEMKPQWYAESDIPFEKMWADDKYWVPLFLEGKRFRALFEFDDESTIVRYDLDTLKEGE 268
            S+ T S +    K LTL+F RR   +S +                    +LLGMKKRGFG GKWNGFGGKVE GE++E AA REL EE+ V A  + LRG++ F   + P V++V V+EAV    GEP+E+EEM+P+W+   D+P ++MWADD++W+PLFLEGK FR  F F DE TI+R+ L+ +   E
Sbjct:    7 SAATESDSKKSVKDLTLVFCRRTKRSSDIGXXXXXXXXXXXXXXXXXXXILLGMKKRGFGEGKWNGFGGKVESGESVEEAAKRELMEEAGVTARELSLRGRLIFHVPSYPSVMRVHVYEAVS-FEGEPEESEEMRPRWFRIRDLPLKEMWADDEHWMPLFLEGKSFRGEFHFSDEQTILRHVLEAVTPQE 195          
BLAST of NO07G03140 vs. NCBI_GenBank
Match: OGZ72261.1 (hypothetical protein A2908_03925 [Candidatus Staskawiczbacteria bacterium RIFCSPLOWO2_01_FULL_38_12b])

HSP 1 Score: 164.9 bits (416), Expect = 3.600e-37
Identity = 86/163 (52.76%), Postives = 117/163 (71.78%), Query Frame = 0
Query:  108 KVLTLLFVRRANPTSGVKEVLLGMKKRGFGIGKWNGFGGKVEPGETIEAAALRELEEESCVKASGVELRGKITFTFLTIP-EVLKVSVFEAVGPMTGEPQETEEMKPQWYAESDIPFEKMWADDKYWVPLFLEGKRFRALFEFDDESTIVRYDLDTLKEGEEL 270
            KVLTLL + + N      +VLLGMKKRGFG+GKWNGFGGKV+ GE+IE AA REL EE+ + A+ ++  G + F++   P +VL+V++F+A    +G+PQETEEMKP W+ E DIPFE MW DDKYW  LFLE K+F+  F FD ++ I+++   TL+E E +
Sbjct:    4 KVLTLLIIHQDN------KVLLGMKKRGFGMGKWNGFGGKVDNGESIEDAAKRELLEEAGISANEMQKIGVLDFSWKDKPSDVLEVNIFKAT-DFSGQPQETEEMKPAWFLEKDIPFENMWPDDKYWFSLFLENKKFKGEFLFDQQNAIIKH---TLQEHESI 156          
BLAST of NO07G03140 vs. NCBI_GenBank
Match: OGL73657.1 (hypothetical protein A3C96_02160 [Candidatus Uhrbacteria bacterium RIFCSPHIGHO2_02_FULL_60_10])

HSP 1 Score: 164.1 bits (414), Expect = 6.100e-37
Identity = 79/157 (50.32%), Postives = 110/157 (70.06%), Query Frame = 0
Query:  108 KVLTLLFVRRANPTSGVKEVLLGMKKRGFGIGKWNGFGGKVEPGETIEAAALRELEEESCVKASGVELRGKITFTFLTIPEVLKVSVFEAVGPMTGEPQETEEMKPQWYAESDIPFEKMWADDKYWVPLFLEGKRFRALFEFDDESTIVRYDLDTLK 265
            K+LTL  + +         VLLG+KKRGFG G+WNGFGGK+ PGET+EAAA REL EE+ +   G++  G + F F   PE+L+V +F AV   +GEP E+EEM+PQW+A  +IP+++MW DD+YW+PL L GK+FR  F F DE+ I+R +L  ++
Sbjct:    6 KILTLCLIHQH------PRVLLGLKKRGFGAGRWNGFGGKLVPGETVEAAAKRELYEEAGIGVHGLDKVGVLDFEFQGNPEILQVHIFRAV-VFSGEPTESEEMRPQWFAIDEIPYDEMWPDDRYWLPLLLSGKKFRGRFLFGDENAIIRQELSEVE 155          
BLAST of NO07G03140 vs. NCBI_GenBank
Match: XP_019615030.1 (PREDICTED: 7,8-dihydro-8-oxoguanine triphosphatase-like [Branchiostoma belcheri] >XP_019615031.1 PREDICTED: 7,8-dihydro-8-oxoguanine triphosphatase-like [Branchiostoma belcheri])

HSP 1 Score: 164.1 bits (414), Expect = 6.100e-37
Identity = 84/167 (50.30%), Postives = 112/167 (67.07%), Query Frame = 0
Query:  102 PATVKTKVLTLLFVRRANPTSGVKEVLLGMKKRGFGIGKWNGFGGKVEPGETIEAAALRELEEESCVKASGVELRGKITFTFLTIPEVLKVSVFEAVGPMTGEPQETEEMKPQWYAESDIPFEKMWADDKYWVPLFLEGKRFRALFEFDDESTIVRY---DLDTLKE 266
            P  +  KVLTL+ +R        ++VLLGMKKRGFG G+WNGFGGKVE GETIE AA RELEEESC+K   ++  G + F F+  P +L+V VF +    TGEP+ETEEM+P+W+    IP++ MW DD +W PLFL+G +F   F+F    TI+ +   +LDTL +
Sbjct:    4 PVHLSRKVLTLVLIRHQ------QQVLLGMKKRGFGAGRWNGFGGKVEVGETIEQAAKRELEEESCLKVERLQKVGLLLFEFVGDPVILEVHVFSS-RQFTGEPRETEEMRPKWFPVEHIPYDSMWPDDVHWFPLFLKGTKFSGFFKFKGHDTILEHTLQELDTLPQ 163          
BLAST of NO07G03140 vs. NCBI_GenBank
Match: XP_002591223.1 (hypothetical protein BRAFLDRAFT_249348 [Branchiostoma floridae] >EEN47234.1 hypothetical protein BRAFLDRAFT_249348 [Branchiostoma floridae])

HSP 1 Score: 162.9 bits (411), Expect = 1.400e-36
Identity = 83/167 (49.70%), Postives = 113/167 (67.66%), Query Frame = 0
Query:  102 PATVKTKVLTLLFVRRANPTSGVKEVLLGMKKRGFGIGKWNGFGGKVEPGETIEAAALRELEEESCVKASGVELRGKITFTFLTIPEVLKVSVFEAVGPMTGEPQETEEMKPQWYAESDIPFEKMWADDKYWVPLFLEGKRFRALFEFDDESTIVRY---DLDTLKE 266
            P  +  KVLTL+ +R        ++VLLGMKKRGFG G+WNGFGGKVE GETIE AA RELEEESC++   ++  G + F F+  P +L+V VF +    TGEP+ETEEM+P+W+    IP++ MW DD +W PLFL+G +F   F+F   +TI+ +   +LDTL +
Sbjct:    4 PVHLSRKVLTLVLIRHQ------QQVLLGMKKRGFGAGRWNGFGGKVEMGETIEQAAKRELEEESCLRVDSLQKVGLLLFEFVGDPVMLEVHVFSS-RHFTGEPRETEEMRPKWFPVEHIPYDSMWPDDIHWFPLFLKGSKFSGFFKFKGHNTILEHSLQELDTLPQ 163          
BLAST of NO07G03140 vs. NCBI_GenBank
Match: KKT81306.1 (hypothetical protein UW79_C0022G0021 [Candidatus Yanofskybacteria bacterium GW2011_GWA2_44_9])

HSP 1 Score: 162.5 bits (410), Expect = 1.800e-36
Identity = 81/159 (50.94%), Postives = 109/159 (68.55%), Query Frame = 0
Query:  105 VKTKVLTLLFVRRANPTSGVKEVLLGMKKRGFGIGKWNGFGGKVEPGETIEAAALRELEEESCVKASGVELRGKITFTFLTIPEVLKVSVFEAVGPMTGEPQETEEMKPQWYAESDIPFEKMWADDKYWVPLFLEGKRFRALFEFDDESTIVRYDLDTL 264
            +K KVLTL  + +         +LLGMKKRGFG+GKWNGFGGKVEPGE IE A  RE+ EE+ VK +G E  G I F F   PE L+V +F+A G  +GEP+E++EMKPQW+   +IP ++MW+DDK W+PLFL GK+F+  F F+    I+ + L+ +
Sbjct:    1 MKKKVLTLCLIHQH------PNLLLGMKKRGFGVGKWNGFGGKVEPGEEIEDAVYREVWEEAGVKIAGAEKVGHINFKFAGEPEALEVHIFKA-GSFSGEPRESDEMKPQWFHIDEIPLDQMWSDDKIWLPLFLAGKKFKGEFFFEGHDKILEHKLELI 152          
BLAST of NO07G03140 vs. NCBI_GenBank
Match: PIY96051.1 (DNA mismatch repair protein MutT [Candidatus Jorgensenbacteria bacterium CG_4_10_14_0_8_um_filter_39_13])

HSP 1 Score: 161.8 bits (408), Expect = 3.000e-36
Identity = 74/140 (52.86%), Postives = 103/140 (73.57%), Query Frame = 0
Query:  126 EVLLGMKKRGFGIGKWNGFGGKVEPGETIEAAALRELEEESCVKASGVELRGKITFTFLTIPEVLKVSVFEAVGPMTGEPQETEEMKPQWYAESDIPFEKMWADDKYWVPLFLEGKRFRALFEFDDESTIVRYDLDTLKE 266
            ++LLGMKKRGFG G+WNGFGGKV PGE+IEAAA RE+ EE+ + A  +E RG ++F F   PEVL+V +F ++  +  +P ETEEMKP+W+  ++IP+EKMW DDK+W+P+ L GK+F   F F D  T++ YD+  + E
Sbjct:   15 QILLGMKKRGFGQGRWNGFGGKVIPGESIEAAARREMAEEAGISAKNMEKRGILSFEFEGNPEVLEVHIF-SISDLKDKPIETEEMKPKWFRLNEIPYEKMWPDDKFWLPILLNGKKFTGSFYFRDNDTLLSYDIKEILE 153          
BLAST of NO07G03140 vs. NCBI_GenBank
Match: KKS83792.1 (Nudix (Nucleoside diphosphate linked moiety X)-type motif 1 [Parcubacteria group bacterium GW2011_GWD2_43_10] >OHA54199.1 hypothetical protein A2226_02420 [Candidatus Veblenbacteria bacterium RIFOXYA2_FULL_43_9])

HSP 1 Score: 159.5 bits (402), Expect = 1.500e-35
Identity = 77/143 (53.85%), Postives = 100/143 (69.93%), Query Frame = 0
Query:  126 EVLLGMKKRGFGIGKWNGFGGKVEPGETIEAAALRELEEESCVKASGVELRGKITFTFLTIPEVLKVSVFEAVGPMTGEPQETEEMKPQWYAESDIPFEKMWADDKYWVPLFLEGKRFRALFEFDDESTIVRYDLDTLKEGEE 269
            +VLLGMKKRGFG G+WNGFGGKVE GE IE  A REL EE  + A G+E  G I F F    E+L+V +F+     +GEP E+EEMKPQW+    IPF+ MW+DDKYW+PLFL GK+F+  F FD+  T+++++L  +K   E
Sbjct:   15 KVLLGMKKRGFGAGRWNGFGGKVEAGEKIEDTAKRELNEEVGISAVGLEKVGIIDFEFKGNSEILEVHIFKG-QDYSGEPVESEEMKPQWFLIDAIPFQDMWSDDKYWLPLFLAGKKFKGYFLFDESDTVIKHELSEVKSLSE 156          
BLAST of NO07G03140 vs. NCBI_GenBank
Match: OHA66393.1 (hypothetical protein A3C04_04305 [Candidatus Wildermuthbacteria bacterium RIFCSPHIGHO2_02_FULL_45_25])

HSP 1 Score: 159.1 bits (401), Expect = 2.000e-35
Identity = 80/154 (51.95%), Postives = 105/154 (68.18%), Query Frame = 0
Query:  108 KVLTLLFVRRANPTSGVKEVLLGMKKRGFGIGKWNGFGGKVEPGETIEAAALRELEEESCVKASGVELRGKITFTFLTIPEVLKVSVFEAVGPMTGEPQETEEMKPQWYAESDIPFEKMWADDKYWVPLFLEGKRFRALFEFDDESTIVRYDLD 262
            KVLTL  + + +      +VLLGMKKRGFG G+WNGFGGKV  GE+IE A  REL+EE+ +  +  E +G I F F    ++L+V VF+      GEP ETEEMKPQW+A  DIPF++MW DDKYW+P  LEGK F+A F F DE T++ + ++
Sbjct:    3 KVLTLCIIHQGH------QVLLGMKKRGFGQGRWNGFGGKVHEGESIEEAMKRELKEEAGIVLNSYEKKGVIDFEFQGEAQILEVHVFKG-SEFEGEPVETEEMKPQWFAIGDIPFDQMWVDDKYWLPSVLEGKNFKAKFLFADEDTLIDHTIE 149          
The following BLAST results are available for this feature:
BLAST of NO07G03140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27059.12.700e-7778.42dihydro-8-oxoguanine triphosphatase [Nannochlorops... [more]
CBN75609.12.500e-3847.37conserved unknown protein [Ectocarpus siliculosus][more]
OGZ72261.13.600e-3752.76hypothetical protein A2908_03925 [Candidatus Stask... [more]
OGL73657.16.100e-3750.32hypothetical protein A3C96_02160 [Candidatus Uhrba... [more]
XP_019615030.16.100e-3750.30PREDICTED: 7,8-dihydro-8-oxoguanine triphosphatase... [more]
XP_002591223.11.400e-3649.70hypothetical protein BRAFLDRAFT_249348 [Branchiost... [more]
KKT81306.11.800e-3650.94hypothetical protein UW79_C0022G0021 [Candidatus Y... [more]
PIY96051.13.000e-3652.86DNA mismatch repair protein MutT [Candidatus Jorge... [more]
KKS83792.11.500e-3553.85Nudix (Nucleoside diphosphate linked moiety X)-typ... [more]
OHA66393.12.000e-3551.95hypothetical protein A3C04_04305 [Candidatus Wilde... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL100nonsL100Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR072ncniR072Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000545NSK000545Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G03140.1NO07G03140.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|581041gene_2646Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100056g36gene3489Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G03140.1NO07G03140.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G03140 ID=NO07G03140|Name=NO07G03140|organism=Nannochloropsis oceanica|type=gene|length=810bp
ATGTGGGGCGTCAGGAAGGCTTTCTTTATCTCCTCCATATCCGCTGCTTC
TGTTGCTGTTACTGCTCTTGCTTGTCGCATTCACACCACGACAACCTCCC
CCCGCTTTTGCTTCACCGCCCCCCCTCCAAGCTTCTCCTTGCCGCACTTG
TGTGACTTAAGGACCACAAGGACGACGGCATTACGTCTCGGTTTTGACTT
CACTGCCGCTGCTCAACCCTATTCCTCCTTCTTTCTCTCCCGCTCCGGTT
CGACCATCGCCACGAAGAGACACATGGCGGCAAGCAGCAGCACCACCATC
TCTCCGGCCACCGTGAAGACCAAGGTCCTCACTCTTCTCTTCGTACGGCG
CGCAAATCCCACTTCAGGGGTCAAGGAAGTCTTGCTAGGTATGAAAAAAC
GAGGATTTGGGATTGGGAAATGGAATGGCTTCGGTGGGAAAGTCGAGCCT
GGGGAGACAATCGAAGCCGCCGCCTTGCGAGAGCTCGAGGAAGAGTCGTG
CGTCAAGGCCAGCGGGGTGGAGCTACGAGGGAAGATAACGTTTACATTTC
TGACGATTCCCGAGGTGCTGAAAGTGAGTGTATTCGAGGCGGTGGGGCCA
ATGACGGGGGAGCCGCAAGAGACGGAGGAGATGAAGCCACAGTGGTATGC
AGAGAGTGACATTCCGTTTGAGAAAATGTGGGCAGACGACAAGTATTGGG
TACCATTATTTTTGGAAGGAAAGCGATTTAGGGCTTTGTTTGAGTTTGAT
GACGAGAGTACAATCGTGAGGTATGATTTGGATACGTTGAAGGAGGGTGA
AGAGTTGTGA
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protein sequence of NO07G03140.1

>NO07G03140.1-protein ID=NO07G03140.1-protein|Name=NO07G03140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=270bp
MWGVRKAFFISSISAASVAVTALACRIHTTTTSPRFCFTAPPPSFSLPHL
CDLRTTRTTALRLGFDFTAAAQPYSSFFLSRSGSTIATKRHMAASSSTTI
SPATVKTKVLTLLFVRRANPTSGVKEVLLGMKKRGFGIGKWNGFGGKVEP
GETIEAAALRELEEESCVKASGVELRGKITFTFLTIPEVLKVSVFEAVGP
MTGEPQETEEMKPQWYAESDIPFEKMWADDKYWVPLFLEGKRFRALFEFD
DESTIVRYDLDTLKEGEEL*
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Synonyms
Publications