NO07G03130, NO07G03130 (gene) Nannochloropsis oceanica

Overview
NameNO07G03130
Unique NameNO07G03130
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2140
Alignment locationchr7:870458..872597 +

Link to JBrowse

Properties
Property NameValue
DescriptionEukaryotic translation initiation factor 2 subunit 3
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:870458..872597 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
GO:0016787hydrolase activity
GO:0008135translation factor activity, RNA binding
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR009001Transl_elong_EF1A/Init_IF2_C
IPR009000Transl_B-barrel
IPR004161Transl_elong_EFTu/EF1A_2
IPR015256TIF2_gsu_C
IPR000795TF_GTP-bd_dom
Homology
[Close]
BLAST of NO07G03130 vs. NCBI_GenBank
Match: CCI43228.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 672.2 bits (1733), Expect = 1.200e-189
Identity = 344/447 (76.96%), Postives = 391/447 (87.47%), Query Frame = 0 
Query:    9 LTPLTPEVISKQATINIGTIGHVAHGKSTVVKAISGVNTVRTKPELERNITIKLGYANAKIFKCNPAEDGVPGNYRAKGSSAPDVF--EEDGKVWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEACPQPQTSEHLAAVEIMRLANIIILQNKVDLVKPADASMQYEQIRKFVAGTVADSSPIIPISAVKKFNIDVVCEYLVNRIPVPPRDFTSSPRLIVIRSFDVNKPGELVEDLKGGVAGGSILQGVLKLGDQIEVRPGIVTKDAEGNVKCVPIFSQITSLFAEHNELEFAVPGGLIGVGTRIDPTLTRADRLVGQVLGLRGQLPEVFTEVEISYYLLRRLLGVKTQDGEKKAKVQKLQAKEILMVNIGSTATGGKVLGLREDVGKREDYAKIMLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGTTIKIASS 454
            L+PLTPEVIS+QATINIGTIGHVAHGKSTVVKAISGV TVR K ELERNITIKLGYANAKI+K    E+G+ G YRA GSS PD F  E D K W LQRHVSFVDCPGHDILMATMLNGAAVMDAALLL+AGNE CPQPQTSEHLAA+EIMRL NIIILQNKVDL+K   A  Q+EQI+KFVAGTVA  +PIIPISAV K+NIDVVCEY+V  IP+P RDFTS P+LIVIRSFDVNKPGE VE+LKGGVAGGSILQGVL++ D+IEVRPGIV+K+ +G V CVPIFS+I SLFAE N+L++AVPGGLIGVGT IDPTLTR+DRLVGQVLG++G LP+VFTE+EI++YLL+RLLGVKTQDG K +KVQKL   E+LMVNIGSTATGGKVL +++D+      AKI+LT PVCTQEGEKIA+SRR++KHWRLIGWGQIRRG+ I+I S+
Sbjct:   19 LSPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYK-TENENGI-GCYRAFGSSKPDTFVDEVDQKKWVLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEVCPQPQTSEHLAAIEIMRLQNIIILQNKVDLIKKDVAVAQHEQIKKFVAGTVAHDAPIIPISAVLKYNIDVVCEYIVRNIPIPKRDFTSKPKLIVIRSFDVNKPGEDVENLKGGVAGGSILQGVLRVNDEIEVRPGIVSKNDDGKVTCVPIFSRIVSLFAEKNDLQYAVPGGLIGVGTLIDPTLTRSDRLVGQVLGIKGNLPDVFTELEINFYLLKRLLGVKTQDGSKASKVQKLSKAEVLMVNIGSTATGGKVLAVKQDL------AKILLTVPVCTQEGEKIAISRRIEKHWRLIGWGQIRRGSRIEITSA 457
[Close]
BLAST of NO07G03130 vs. NCBI_GenBank
Match: ETK90169.1 (eukaryotic translation initiation factor 2 subunit 3 [Phytophthora parasitica] >ETK90170.1 eukaryotic translation initiation factor 2 subunit 3, variant [Phytophthora parasitica] >ETL43579.1 eukaryotic translation initiation factor 2 subunit 3 [Phytophthora parasitica] >ETL43580.1 eukaryotic translation initiation factor 2 subunit 3, variant [Phytophthora parasitica] >ETL96753.1 eukaryotic translation initiation factor 2 subunit 3 [Phytophthora parasitica] >ETL96754.1 eukaryotic translation initiation factor 2 subunit 3, variant [Phytophthora parasitica] >ETM49906.1 eukaryotic translation initiation factor 2 subunit 3 [Phytophthora parasitica] >ETM49907.1 eukaryotic translation initiation factor 2 subunit 3, variant [Phytophthora parasitica] >ETO79036.1 eukaryotic translation initiation factor 2 subunit 3 [Phytophthora parasitica P1976] >ETO79037.1 eukaryotic translation initiation factor 2 subunit 3, variant [Phytophthora parasitica P1976] >ETP20061.1 eukaryotic translation initiation factor 2 subunit 3 [Phytophthora parasitica CJ01A1] >ETP20062.1 eukaryotic translation initiation factor 2 subunit 3, variant [Phytophthora parasitica CJ01A1] >ETP47981.1 eukaryotic translation initiation factor 2 subunit 3 [Phytophthora parasitica P10297] >ETP47982.1 eukaryotic translation initiation factor 2 subunit 3, variant [Phytophthora parasitica P10297] >KUF76040.1 Eukaryotic translation initiation factor 2 subunit 3 [Phytophthora nicotianae] >KUF97409.1 hypothetical protein AM588_10011550 [Phytophthora nicotianae])

HSP 1 Score: 671.8 bits (1732), Expect = 1.600e-189
Identity = 346/449 (77.06%), Postives = 390/449 (86.86%), Query Frame = 0 
Query:    9 LTPLTPEVISKQATINIGTIGHVAHGKSTVVKAISGVNTVRTKPELERNITIKLGYANAKIFKCNPAEDGVP-GNYRAKGSSAPDVF--EEDGK-VWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEACPQPQTSEHLAAVEIMRLANIIILQNKVDLVKPADASMQYEQIRKFVAGTVADSSPIIPISAVKKFNIDVVCEYLVNRIPVPPRDFTSSPRLIVIRSFDVNKPGELVEDLKGGVAGGSILQGVLKLGDQIEVRPGIVTKDAEGNVKCVPIFSQITSLFAEHNELEFAVPGGLIGVGTRIDPTLTRADRLVGQVLGLRGQLPEVFTEVEISYYLLRRLLGVKTQDGEKKAKVQKLQAKEILMVNIGSTATGGKVLGLREDVGKREDYAKIMLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGTTIKIASS 454
            LTPLTPEVIS+QATINIGTIGHVAHGKSTVVKAISGV TVR K ELERNITIKLGYANAKI++   AE+G   G YRA GSS PD F  E D K  W LQRHVSFVDCPGHDILMATMLNGAAVMDAALLL+AGNE CPQPQTSEHLAA+EIMRL NIIILQNKVDL+K   A  Q+EQI+KFVAGTVA  +PIIPISAV K+N+DVVCEY+   IP+P RDFTS P+LIVIRSFDVNKPGE VE+LKGGVAGGSIL+GVL++GD+IEVRPGIV+KD EG + CVPIFS+I SL+AE N+L+FAVPGGLIGVGT IDPTLTR+DRLVGQVLGL+G LP VFTE+EI++YLL+RLLGVKTQ+G K +KVQKL   E+LMVNIGSTATGGKVL +++D+      AKI+LT PVCTQEGEKIA+SRR+DKHWRLIGWGQIRRG+ I+IA S
Sbjct:   22 LTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYR---AENGTGIGCYRAFGSSKPDRFVDENDEKTTWVLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEVCPQPQTSEHLAAIEIMRLQNIIILQNKVDLIKEDAAVAQHEQIKKFVAGTVAHDAPIIPISAVLKYNVDVVCEYICRNIPIPKRDFTSKPKLIVIRSFDVNKPGEDVENLKGGVAGGSILEGVLRVGDEIEVRPGIVSKDEEGKMTCVPIFSRIVSLYAEKNDLQFAVPGGLIGVGTHIDPTLTRSDRLVGQVLGLKGSLPHVFTELEINFYLLKRLLGVKTQEGSKASKVQKLSKAEVLMVNIGSTATGGKVLAVKQDL------AKILLTVPVCTQEGEKIAISRRIDKHWRLIGWGQIRRGSRIEIADS 461
[Close]
BLAST of NO07G03130 vs. NCBI_GenBank
Match: OWZ23155.1 (Eukaryotic translation initiation factor 2 subunit 3 [Phytophthora megakarya])

HSP 1 Score: 671.8 bits (1732), Expect = 1.600e-189
Identity = 344/449 (76.61%), Postives = 389/449 (86.64%), Query Frame = 0 
Query:    9 LTPLTPEVISKQATINIGTIGHVAHGKSTVVKAISGVNTVRTKPELERNITIKLGYANAKIFKCNPAEDGVP-GNYRAKGSSAPDVF---EEDGKVWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEACPQPQTSEHLAAVEIMRLANIIILQNKVDLVKPADASMQYEQIRKFVAGTVADSSPIIPISAVKKFNIDVVCEYLVNRIPVPPRDFTSSPRLIVIRSFDVNKPGELVEDLKGGVAGGSILQGVLKLGDQIEVRPGIVTKDAEGNVKCVPIFSQITSLFAEHNELEFAVPGGLIGVGTRIDPTLTRADRLVGQVLGLRGQLPEVFTEVEISYYLLRRLLGVKTQDGEKKAKVQKLQAKEILMVNIGSTATGGKVLGLREDVGKREDYAKIMLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGTTIKIASS 454
            LTPLTPEVIS+QATINIGTIGHVAHGKSTVVKAISGV TVR K ELERNITIKLGYANAKI++   AE+G   G YRA GSS PD F    +D   W LQRHVSFVDCPGHDILMATMLNGAAVMDAALLL+AGNE CPQPQTSEHLAA+EIMRL NIIILQNKVDL+K   A  Q+EQI+KFVAGTVA  +PIIPISAV K+N+DVVCEY+   IP+P RDFTS P+LIVIRSFDVNKPGE VE+LKGGVAGGSIL+GVL++GD+IEVRPGIV+KD EG + CVPIFS+I SL+AE N+L+FAVPGGLIGVGT IDPTLTR+DRLVGQVLGL+G LP VFTE+EI++YLL+RLLGVKTQ+G K +KVQKL   E+LMVNIGSTATGGKVL +++D+      AKI+LT PVCTQEGEKIA+SRR+DKHWRLIGWGQIRRG+ I+IA S
Sbjct:   22 LTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYR---AENGSGIGCYRAFGSSKPDRFVDESDDKTTWVLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEVCPQPQTSEHLAAIEIMRLQNIIILQNKVDLIKEDAAVAQHEQIKKFVAGTVAHDAPIIPISAVLKYNVDVVCEYICRNIPIPKRDFTSKPKLIVIRSFDVNKPGEDVENLKGGVAGGSILEGVLRVGDEIEVRPGIVSKDEEGKMTCVPIFSRIVSLYAEKNDLQFAVPGGLIGVGTHIDPTLTRSDRLVGQVLGLKGSLPHVFTELEINFYLLKRLLGVKTQEGSKASKVQKLSKAEVLMVNIGSTATGGKVLAVKQDL------AKILLTVPVCTQEGEKIAISRRIDKHWRLIGWGQIRRGSRIEIADS 461
[Close]
BLAST of NO07G03130 vs. NCBI_GenBank
Match: OQS07835.1 (eukaryotic translation initiation factor 2 subunit 3 [Thraustotheca clavata])

HSP 1 Score: 669.8 bits (1727), Expect = 6.000e-189
Identity = 339/457 (74.18%), Postives = 386/457 (84.46%), Query Frame = 0 
Query:    5 DPSTLTPLTPEVISKQATINIGTIGHVAHGKSTVVKAISGVNTVRTKPELERNITIKLGYANAKIFKCNPA-----EDGVPGN----YRAKGSSAPDVF-EEDGKVWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEACPQPQTSEHLAAVEIMRLANIIILQNKVDLVKPADASMQYEQIRKFVAGTVADSSPIIPISAVKKFNIDVVCEYLVNRIPVPPRDFTSSPRLIVIRSFDVNKPGELVEDLKGGVAGGSILQGVLKLGDQIEVRPGIVTKDAEGNVKCVPIFSQITSLFAEHNELEFAVPGGLIGVGTRIDPTLTRADRLVGQVLGLRGQLPEVFTEVEISYYLLRRLLGVKTQDGEKKAKVQKLQAKEILMVNIGSTATGGKVLGLREDVGKREDYAKIMLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGTTIKIA 452
            DP TLTPLTPEVIS+QATINIGTIGHVAHGKSTVVKAISGV TVR K ELERNITIKLGYANAKI++  P      +   P N    Y A GSS PD F +E G  W LQRHVSFVDCPGHDILMATMLNGAAVMDAALLL+AGNE CPQPQTSEHLAAVEIMRL NIIILQNKVDL+KP  A  QYEQ+++FVAGTVA  +PIIPISAV K+NIDVVCEY+V  IP+P RDF S P+LIVIRSFDVNKPG+ VE+L+GGVAGGSILQGVL++GD+IEVRPGI +KD +G ++C PIFS+I SL AEHNEL++AVPGGLIGVGT IDPTLTR+DRLVGQVLGL+G LP++FTE+EI++YLLRRLLGVKT +G K +KVQKL   E+LM+NIGST TG K++ ++ D+      AKI+LTQPVCTQEGEKIALSRR+DKHWRLIGWG+IRRG  I IA
Sbjct:   14 DPKTLTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYRSEPQVVKPDDTTTPANTTPMYAAFGSSKPDRFTDEKGVTWALQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRLQNIIILQNKVDLIKPDAAKAQYEQVKQFVAGTVAHDAPIIPISAVLKYNIDVVCEYIVRNIPIPRRDFVSKPKLIVIRSFDVNKPGQDVENLQGGVAGGSILQGVLRVGDEIEVRPGIYSKDEDGKIQCTPIFSRIVSLKAEHNELQYAVPGGLIGVGTLIDPTLTRSDRLVGQVLGLKGSLPDIFTELEINFYLLRRLLGVKTSEGSKASKVQKLTKAEVLMINIGSTTTGAKIVAVKHDL------AKILLTQPVCTQEGEKIALSRRIDKHWRLIGWGEIRRGVKIDIA 464
[Close]
BLAST of NO07G03130 vs. NCBI_GenBank
Match: GAY01531.1 (eukaryotic translation initiation factor 2 subunit 3 [Pythium insidiosum])

HSP 1 Score: 664.1 bits (1712), Expect = 3.300e-187
Identity = 343/446 (76.91%), Postives = 386/446 (86.55%), Query Frame = 0 
Query:    9 LTPLTPEVISKQATINIGTIGHVAHGKSTVVKAISGVNTVRTKPELERNITIKLGYANAKIFKCNPAEDGVP-GNYRAKGSSAPDVF--EEDGK-VWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEACPQPQTSEHLAAVEIMRLANIIILQNKVDLVKPADASMQYEQIRKFVAGTVADSSPIIPISAVKKFNIDVVCEYLVNRIPVPPRDFTSSPRLIVIRSFDVNKPGELVEDLKGGVAGGSILQGVLKLGDQIEVRPGIVTKDAEGNVKCVPIFSQITSLFAEHNELEFAVPGGLIGVGTRIDPTLTRADRLVGQVLGLRGQLPEVFTEVEISYYLLRRLLGVKTQDGEKKAKVQKLQAKEILMVNIGSTATGGKVLGLREDVGKREDYAKIMLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGTTIKI 451
            LTPLTPEVIS+QATINIGTIGHVAHGKSTVVKAISGV TVR K EL RNITIKLGYANAKI++   AE+G   G YRA GSS PD F  E DGK VW LQRHVSFVDCPGHDILMATMLNGAAVMDAALLL+AGNE CPQPQTSEHLAA+EIMRL NIIILQNKVDL+K   A  Q+EQI+KFVAGTVA  +PIIPISAV K+NIDVVCEY+   IP+P RDFTS P+LIVIRSFDVNKPGE VE LKGGVAGGSIL+GVL++GD+IEVRPGIV+KD  G V C PI+S+I SLFAE N+L+FAVPGGLIGVGT+IDPTLTR+DRLVGQVLGL+G LP VFTE+EI++YLL+RLLGVKTQ+G K +KVQKL   E+LMVNIGSTATGGKVL +++D+      AKI+LT PVCTQEGEKIA+SRR+DKHWRLIGWG+IRRG  ++I
Sbjct:   22 LTPLTPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELVRNITIKLGYANAKIYR---AENGSGIGCYRACGSSKPDRFIDEVDGKTVWVLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEVCPQPQTSEHLAAIEIMRLQNIIILQNKVDLIKEDAAVAQHEQIKKFVAGTVAHDAPIIPISAVLKYNIDVVCEYICRNIPIPRRDFTSKPKLIVIRSFDVNKPGEEVEKLKGGVAGGSILEGVLRVGDEIEVRPGIVSKDEGGKVSCEPIYSRIVSLFAEKNDLQFAVPGGLIGVGTKIDPTLTRSDRLVGQVLGLKGSLPHVFTELEINFYLLKRLLGVKTQEGSKASKVQKLSKAEVLMVNIGSTATGGKVLAVKQDL------AKILLTAPVCTQEGEKIAISRRIDKHWRLIGWGEIRRGIRVEI 458
[Close]
BLAST of NO07G03130 vs. NCBI_GenBank
Match: GBG27390.1 (Eukaryotic translation initiation factor 2 subunit 3 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 661.4 bits (1705), Expect = 2.100e-186
Identity = 330/442 (74.66%), Postives = 378/442 (85.52%), Query Frame = 0 
Query:    5 DPSTLTPLTPEVISKQATINIGTIGHVAHGKSTVVKAISGVNTVRTKPELERNITIKLGYANAKIFKCNPAEDGVPGNYRAKGSSAPDVFEEDGKVWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEACPQPQTSEHLAAVEIMRLANIIILQNKVDLVKPADASMQYEQIRKFVAGTVADSSPIIPISAVKKFNIDVVCEYLVNRIPVPPRDFTSSPRLIVIRSFDVNKPGELVEDLKGGVAGGSILQGVLKLGDQIEVRPGIVTKDAEGNVKCVPIFSQITSLFAEHNELEFAVPGGLIGVGTRIDPTLTRADRLVGQVLGLRGQLPEVFTEVEISYYLLRRLLGVKTQDGEKKAKVQKLQAKEILMVNIGSTATGGKVLGLREDVGKREDYAKIMLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGT 447
            DP  LTPLTPEVIS+QATINIGTIGHVAHGKSTVVK++SGV TVR K ELERNITIKLGYANAKI++C   +   PGNY ++GS+  DVFE++   WEL+RH+SFVDCPGHDILMATMLNGAAVMDAALLLIAGNE+CPQPQTSEHLAAVEIM+L NIIILQNK+DLVK   A  Q+EQIR+FVAGTVAD SPIIPISAV K+NIDV+CEY+V  IPVPPRDFTSSP +IVIRSFDVNKPG+ ++ LKGGVAGGSIL G+LK+GD IEVRPGI  K A+G VKC+PI S++ SL+AE N+L +AVPGGLIGVGT+IDPTLTRADRLVG VLG  G LPEV+TEVEI++YLLRRLLGVKT DG K AKV KLQ  E+L+VNIGST+TG  V+ +R D+      AKI L  PVCTQEGEK+ALSRRV+KHWRL+GWG IRRG+
Sbjct:   50 DPEKLTPLTPEVISRQATINIGTIGHVAHGKSTVVKSLSGVKTVRFKNELERNITIKLGYANAKIYECVNPDCPKPGNYTSRGSNTADVFEDEKGTWELRRHLSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAVEIMKLQNIIILQNKIDLVKEDAAIQQHEQIRQFVAGTVADKSPIIPISAVLKYNIDVICEYMVKHIPVPPRDFTSSPHMIVIRSFDVNKPGQDIDSLKGGVAGGSILHGILKVGDDIEVRPGISNKRADGTVKCLPIRSKVVSLYAEENDLNYAVPGGLIGVGTKIDPTLTRADRLVGHVLGHPGSLPEVYTEVEINFYLLRRLLGVKTSDGGKGAKVHKLQKNEVLLVNIGSTSTGCTVVAMRGDM------AKIQLMDPVCTQEGEKVALSRRVEKHWRLVGWGTIRRGS 485
[Close]
BLAST of NO07G03130 vs. NCBI_GenBank
Match: XP_009822632.1 (eukaryotic translation initiation factor 2 subunit 3 [Aphanomyces astaci] >ETV87769.1 eukaryotic translation initiation factor 2 subunit 3 [Aphanomyces astaci])

HSP 1 Score: 656.8 bits (1693), Expect = 5.200e-185
Identity = 338/462 (73.16%), Postives = 385/462 (83.33%), Query Frame = 0 
Query:    5 DPSTLTPLTPEVISKQATINIGTIGHVAHGKSTVVKAISGVNTVRTKPELERNITIKLGYANAKIFKCNP-------AEDGVPGN-------YRAKGSSAPDVFEED-GKVWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEACPQPQTSEHLAAVEIMRLANIIILQNKVDLVKPADASMQYEQIRKFVAGTVADSSPIIPISAVKKFNIDVVCEYLVNRIPVPPRDFTSSPRLIVIRSFDVNKPGELVEDLKGGVAGGSILQGVLKLGDQIEVRPGIVTKDAEGNVKCVPIFSQITSLFAEHNELEFAVPGGLIGVGTRIDPTLTRADRLVGQVLGLRGQLPEVFTEVEISYYLLRRLLGVKTQDGEKKAKVQKLQAKEILMVNIGSTATGGKVLGLREDVGKREDYAKIMLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGTTIKIA 452
            D  TLTPLTPEVIS+QATIN+GTIGHVAHGKSTVVKAISGV TVR K ELERNITIKLGYANAKI++  P       +EDGV          Y A GSS PD F +D G  W LQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNE CPQPQTSEHLA+VEIMRL NIIILQNKVDL+KP  A  QYEQ+++FVAGTVA ++PIIPISAV K+NID+VCE++V  IP+P RDFTS P+LIVIRSFDVNKPG+ VE L+GGVAGGSILQGVL+LGD+IEVRPGI +KD +G V C PIFS+I SL AE N+L++AVPGGLIGVGT IDPTLTR+DRLVGQVLGL+G LP+VFTE+EI++YLLRRLLGVKT +G K  +V+KL   E+LM+NIGST +G K+L +R D+      AKI+LTQPVCTQEGEKIALSRR+DKHWRLIGWG+IRRG  I IA
Sbjct:   17 DVKTLTPLTPEVISRQATINVGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYRSEPQTPKPVSSEDGVVATAAPAGPMYTAFGSSKPDRFTDDKGVTWVLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEVCPQPQTSEHLASVEIMRLQNIIILQNKVDLIKPDAAKAQYEQVKQFVAGTVAANAPIIPISAVLKYNIDLVCEHIVRNIPIPLRDFTSKPKLIVIRSFDVNKPGQDVESLEGGVAGGSILQGVLRLGDEIEVRPGIFSKDDDGKVNCTPIFSRIVSLKAEKNDLQYAVPGGLIGVGTLIDPTLTRSDRLVGQVLGLKGCLPDVFTELEINFYLLRRLLGVKTTEGSKGLRVEKLTKTEVLMINIGSTTSGAKILAMRADL------AKIVLTQPVCTQEGEKIALSRRIDKHWRLIGWGEIRRGIKIHIA 472
[Close]
BLAST of NO07G03130 vs. NCBI_GenBank
Match: OEU15732.1 (translation initiation factor eIF-2, gamma subunit [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 655.6 bits (1690), Expect = 1.200e-184
Identity = 341/456 (74.78%), Postives = 389/456 (85.31%), Query Frame = 0 
Query:    5 DPSTLTPLTPEVISKQATINIGTIGHVAHGKSTVVKAISGVNTVRTKPELERNITIKLGYANAKIFKCNP-AEDGVPGNYRAKGSSAPDVFEED--GKVWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEACPQPQTSEHLAAVEIMRLANIIILQNKVDLVKPADASMQYEQIRKFVAGTVADSSPIIPISAVKKFNIDVVCEYLVNRIPVPPRDFTSSPRLIVIRSFDVNKPGELVEDLKGGVAGGSILQGVLKLGDQIEVRPGIVTK----DAEGNVKCVPIFSQITSLFAEHNELEFAVPGGLIGVGTRIDPTLTRADRLVGQVLGLRGQLPEVFTEVEISYYLLRRLLGVKTQDGEKKAKVQKLQAKEILMVNIGSTATGGKVLGLREDVGKREDYAKIMLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGTTIKIASS 454
            DPS LT LTP+VIS+QATINIGTIGHVAHGKSTVVKAISGV TVR K ELERNITIKLGYANAKI+K +P  E G  G+Y ++GS+  D F +D  G  + L+RHVSFVDCPGHDILMATMLNGAAVMDAA LL+AGNE CPQPQTSEHLAAVEIMRL  I+ILQNKVDLVKP  A  Q EQIRKFVAGTVADS+PIIPISAV K+NIDVVCEY+V +IP+P RDFTS P+LIVIRSFDVN+PG+ V DL+GGVAGGSIL+GVLK+GD++EVRPGIVTK    D    + C PI+S+I+SL  E+NEL++AVPGGLIGVGTRIDPTLTRADRLVGQVLGLRG+LP+VF E+EISYYLLRRLLGVKT DG K+AKVQKL   EILMVNIGSTATGG+V+ ++ ++      AK+ LTQPVCT EGEKIALSRRVDKHWRLIGWGQIR+G  I++A +
Sbjct:   20 DPSKLTALTPDVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKGDPKGEKG--GSYTSRGSNHADEFIDDVTGITYRLRRHVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNETCPQPQTSEHLAAVEIMRLKEILILQNKVDLVKPDAALAQQEQIRKFVAGTVADSAPIIPISAVLKYNIDVVCEYIVRKIPLPIRDFTSVPQLIVIRSFDVNRPGQDVSDLQGGVAGGSILKGVLKVGDEVEVRPGIVTKQEGEDGNTTMVCSPIYSKISSLATENNELQYAVPGGLIGVGTRIDPTLTRADRLVGQVLGLRGKLPDVFCEIEISYYLLRRLLGVKTSDGGKQAKVQKLSKNEILMVNIGSTATGGRVIAVKGEL------AKVALTQPVCTTEGEKIALSRRVDKHWRLIGWGQIRKGVVIEVAEN 467
[Close]
BLAST of NO07G03130 vs. NCBI_GenBank
Match: XP_008861656.1 (eukaryotic translation initiation factor 2 subunit 3 [Aphanomyces invadans] >ETW10245.1 eukaryotic translation initiation factor 2 subunit 3 [Aphanomyces invadans])

HSP 1 Score: 653.7 bits (1685), Expect = 4.400e-184
Identity = 337/462 (72.94%), Postives = 385/462 (83.33%), Query Frame = 0 
Query:    5 DPSTLTPLTPEVISKQATINIGTIGHVAHGKSTVVKAISGVNTVRTKPELERNITIKLGYANAKIFKCNP------AEDGVPG--------NYRAKGSSAPDVFEED-GKVWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEACPQPQTSEHLAAVEIMRLANIIILQNKVDLVKPADASMQYEQIRKFVAGTVADSSPIIPISAVKKFNIDVVCEYLVNRIPVPPRDFTSSPRLIVIRSFDVNKPGELVEDLKGGVAGGSILQGVLKLGDQIEVRPGIVTKDAEGNVKCVPIFSQITSLFAEHNELEFAVPGGLIGVGTRIDPTLTRADRLVGQVLGLRGQLPEVFTEVEISYYLLRRLLGVKTQDGEKKAKVQKLQAKEILMVNIGSTATGGKVLGLREDVGKREDYAKIMLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGTTIKIA 452
            D  TLTPLTP+VIS+QATINIGTIGHVAHGKSTVVKAISGV TVR K ELERNITIKLGYANAKI++  P      A D V           Y A GSS PD F +D G  W LQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNE CPQPQTSEHLAAVEIMRL NIIILQNKVDL+KP  A  Q+EQ+++FVAGTVA ++PIIPISAV K+NID+VCE++V  IP+P RDFTS P+LIVIRSFDVNKPG+ VE L+GGVAGGSILQGVL+LGD+IEVRPGI +KD +G V C PIFS+I SL AE N+L++AVPGGLIGVGT IDPTLTR+DRLVGQVLGL+G LP+VFTE+EI++YLLRRLLGVKT +G K ++V+KL   E+LM+NIGST +G K+  +R D+      AKI+LTQPVCTQEGEKIALSRR+DKHWRLIGWG+IRRGT I+IA
Sbjct:   18 DVKTLTPLTPDVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYRSEPQAPKVAASDDVAAAPAAPAGPMYSAFGSSKPDRFTDDKGVTWALQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEVCPQPQTSEHLAAVEIMRLQNIIILQNKVDLIKPDAAKAQHEQVKQFVAGTVAANAPIIPISAVLKYNIDLVCEHIVRNIPIPLRDFTSKPKLIVIRSFDVNKPGQDVESLEGGVAGGSILQGVLRLGDEIEVRPGIFSKDDDGKVNCTPIFSRIVSLKAEKNDLQYAVPGGLIGVGTLIDPTLTRSDRLVGQVLGLKGSLPDVFTELEINFYLLRRLLGVKTTEGSKGSRVEKLTKAEVLMINIGSTTSGAKIHAVRADL------AKIVLTQPVCTQEGEKIALSRRIDKHWRLIGWGEIRRGTKIEIA 473
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BLAST of NO07G03130 vs. NCBI_GenBank
Match: XP_002296355.1 (translation initiation factor eIF-2, gamma subunit [Thalassiosira pseudonana CCMP1335] >ACI65072.1 translation initiation factor eIF-2, gamma subunit [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 649.8 bits (1675), Expect = 6.400e-183
Identity = 344/470 (73.19%), Postives = 386/470 (82.13%), Query Frame = 0 
Query:    5 DPSTLTPLTPEVISKQATINIGTIGHVAHGKSTVVKAISGVNTVRTKPELERNITIKLGYANAKIFKCNP---AEDG-----------VPGN----YRAKGSSAPDVF--EEDGKVWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEACPQPQTSEHLAAVEIMRLANIIILQNKVDLVKPADASMQYEQIRKFVAGTVADSSPIIPISAVKKFNIDVVCEYLVNRIPVPPRDFTSSPRLIVIRSFDVNKPGELVEDLKGGVAGGSILQGVLKLGDQIEVRPGIVTK----DAEGNVKCVPIFSQITSLFAEHNELEFAVPGGLIGVGTRIDPTLTRADRLVGQVLGLRGQLPEVFTEVEISYYLLRRLLGVKTQDGEKKAKVQKLQAKEILMVNIGSTATGGKVLGLREDVGKREDYAKIMLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGTTIKI 451
            D S LT LTPEVIS+QATIN+GTIGHVAHGKSTVVKAISGV TVR K ELERNITIKLGYANAKI+K  P    E+G           +PG     Y ++GSS PD F   +    + L+RH+SFVDCPGHDILMATMLNGAAVMD ALLL+AGNE CPQPQTSEHLAAVEIMRL NIIILQNKVDLVK   A  Q EQIRKFV GTVADS+PI+PISAV K+N+D+VCEYLV++IPVP RDFTS PRLIVIRSFDVNKPG+ V +L+GGVAGGSILQGVL++GD+IEVRPGIVTK    D    V C PIFS+I+SL+AE N+L++AVPGGLIGVGTRIDPTLTRADRLVGQVLGLRG+LP+V+ E+EISYYLLRRLLGVKT DG K+AKVQKL   EILMVNIGST TGGKV G + D+      AKI LTQPVCTQEGEKIALSRRVDKHWRLIGWG+I+RG  I++
Sbjct:   17 DASKLTALTPEVISRQATINVGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKAAPPPAIEEGKEDTAATNTEVIPGTSYPMYTSRGSSHPDTFVDPKTNVTYHLRRHISFVDCPGHDILMATMLNGAAVMDGALLLVAGNETCPQPQTSEHLAAVEIMRLKNIIILQNKVDLVKMDAAIAQQEQIRKFVVGTVADSAPILPISAVLKYNVDLVCEYLVHKIPVPVRDFTSVPRLIVIRSFDVNKPGQDVSNLQGGVAGGSILQGVLRVGDEIEVRPGIVTKKENEDGGTTVVCSPIFSRISSLYAESNDLQYAVPGGLIGVGTRIDPTLTRADRLVGQVLGLRGKLPQVYAEIEISYYLLRRLLGVKTSDGGKQAKVQKLTKGEILMVNIGSTGTGGKVEGAKSDL------AKISLTQPVCTQEGEKIALSRRVDKHWRLIGWGEIKRGKKIEV 480
The following BLAST results are available for this feature:
BLAST of NO07G03130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CCI43228.11.200e-18976.96unnamed protein product [Albugo candida][more]
ETK90169.11.600e-18977.06eukaryotic translation initiation factor 2 subunit... [more]
OWZ23155.11.600e-18976.61Eukaryotic translation initiation factor 2 subunit... [more]
OQS07835.16.000e-18974.18eukaryotic translation initiation factor 2 subunit... [more]
GAY01531.13.300e-18776.91eukaryotic translation initiation factor 2 subunit... [more]
GBG27390.12.100e-18674.66Eukaryotic translation initiation factor 2 subunit... [more]
XP_009822632.15.200e-18573.16eukaryotic translation initiation factor 2 subunit... [more]
OEU15732.11.200e-18474.78translation initiation factor eIF-2, gamma subunit... [more]
XP_008861656.14.400e-18472.94eukaryotic translation initiation factor 2 subunit... [more]
XP_002296355.16.400e-18373.19translation initiation factor eIF-2, gamma subunit... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL100nonsL100Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR072ncniR072Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000546NSK000546Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G03130.1NO07G03130.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|581039gene_2645Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100056g37gene3488Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G03130.1NO07G03130.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G03130 ID=NO07G03130|Name=NO07G03130|organism=Nannochloropsis oceanica|type=gene|length=2140bp
ATGgtacgtgtgcgtgcttgcagtctgcctgattactttcttttcctgca
atcctttccttccgttaccaagcacacacgcgatgactgaactctgtagg
ttagatggtgcttctgtagcttcctcccgccgtgacttattctaaaactc
ctccagcaattcttgtgagcctcataatttgtgtctctttgcatgccgca
cctgtccgcaacactccaaaacatgccttttgataaggcttaatgtcctt
cctcatggctcactcactccggcccttactccttcccttcgctctccctc
ctcttagCCTATGCCCGACCCCTCCACCCTCACCCCCCTGACGCCCGAGG
TCATCTCCAAGCAAGCTACCATAAATATCGGGACTATCGGTCACGTGGCG
CACGGAAAATCGACGGTGGTGAAGGCAATCAGTGGCGTGAACACAGTCAG
AACCAAGCCAGAGCTGGAGCGAAATATTACCATCAAGCTAGGgtaaggct
catatctccttccttccctccctccttgtggagatcccaacctagttctc
aaccctccctccgcccctccctccgtccaagGTACGCTAACGCCAAGATC
TTTAAGTGTAACCCCGCAGAAGATGGCGTGCCAGGGAATTACCGAGCCAA
GGGATCGTCTGCTCCTGACGTGTTTGAAGAGGATGGAAAGGTGTGGGAGT
TGCAAAGGCATGTCTCCTTTGTTGATTGCCCGGGGCACGATATTCTGgta
cgttgggagggaggggaggagggagggaaggaggaaagaggggcttaacg
tgtgcacgtggcaaccaataacatcgtcccttctgtttccctccctcgca
tcctcttcctcctcctccccgtcctcctcctcctttccccagATGGCCAC
GATGCTTAACGGCGCCGCAGTCATGGACGCCGCCCTCCTCCTCATCGCTG
GCAATGAAGCTTGTCCTCAGCCACAGACGTCCGAGCATCTGGCTGCCGTG
GAAATCATGCGTCTCGCCAACATCATCATCTTGCAGAATAAGGTGGATCT
GGTCAAGCCCGCCGATGCCTCCATGCAATACGAACAGgtaaacccatcct
ccctttcttcctccctccctccattcctccctccctagctcctgattgcc
cgtccgtccccattttccttttcttgttttctccttgccgcctgaatctt
ttatgtatcgtgtcttttccatctccctctccaactccctctccctccct
ccctccctttctccctctctcctctacagATCCGCAAGTTCGTAGCTGGC
ACCGTCGCGGACTCCTCACCCATCATTCCCATTTCTGCCGTTAAAAAGTT
CAACATCGACGTGGTGTGCGAGTACCTTGTGAACCGCATTCCTGTCCCCC
CTCGTGACTTCACCTCCTCCCCGCGGTTGATCGTCATCCGCTCCTTCGAC
GTGAACAAGCCCGGGGAGCTAGTGGAGGACCTCAAGGGCGGCGTGGCGGG
CGGGAGTATCCTGCAGGGTGTGTTGAAGCTCGGCGACCAGATCGAGGTCC
GGCCCGGCATAGTCACTAAGGACGCCGAGGGGAATGTGAAGTGCGTCCCC
ATCTTCAGCCAGATCACCTCCCTGTTTGCGGAGCACAACGAATTGGAATT
CGCTGTACCCGGGGGCTTGATAGGCGTGGGAACGAGGATTGATCCCACCT
TGACAAGGGCAGATCGCTTGGTGGGCCAGGTGTTGGGATTAAGAGGGCAG
TTGCCCGAGGTCTTTACAGAGGTGGAAATATCGTACTATCTGCTTCGGCG
GCTCTTGGGCGTGAAGACCCAAGACGGGGAGAAGAAGGCGAAAGTGCAGA
AACTGCAAGCCAAAGAGATATTGATGGTTAATATTGGGAGCACGGCCACG
GGCGGGAAGGTGTTGGGGCTGAGGGAGGACGTGGGGAAGAGGGAGGATTA
TGCGAAAATTATGCTGACCCAGCCAGTGTGCACGCAGGAGGGGGAGAAGA
TTGCGTTGAGTCGACGGGTAGATAAGCACTGGAGGTTGATAGGATGGGGA
CAGATTAGGAGGGGCACCACGATTAAGATAGCGAGTAGTTTGAACGCGTC
GGCAGGGGAAGGAGGAGGAGGTGGGGAGGAGGGGAAGTGA
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protein sequence of NO07G03130.1

>NO07G03130.1-protein ID=NO07G03130.1-protein|Name=NO07G03130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=470bp
MPMPDPSTLTPLTPEVISKQATINIGTIGHVAHGKSTVVKAISGVNTVRT
KPELERNITIKLGYANAKIFKCNPAEDGVPGNYRAKGSSAPDVFEEDGKV
WELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEACPQPQTSEH
LAAVEIMRLANIIILQNKVDLVKPADASMQYEQIRKFVAGTVADSSPIIP
ISAVKKFNIDVVCEYLVNRIPVPPRDFTSSPRLIVIRSFDVNKPGELVED
LKGGVAGGSILQGVLKLGDQIEVRPGIVTKDAEGNVKCVPIFSQITSLFA
EHNELEFAVPGGLIGVGTRIDPTLTRADRLVGQVLGLRGQLPEVFTEVEI
SYYLLRRLLGVKTQDGEKKAKVQKLQAKEILMVNIGSTATGGKVLGLRED
VGKREDYAKIMLTQPVCTQEGEKIALSRRVDKHWRLIGWGQIRRGTTIKI
ASSLNASAGEGGGGGEEGK*
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Synonyms
Publications