NO07G03120, NO07G03120 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G03120 vs. NCBI_GenBank
Match: EWM27031.1 (hypothetical protein Naga_100056g38 [Nannochloropsis gaditana]) HSP 1 Score: 217.6 bits (553), Expect = 5.100e-53 Identity = 192/307 (62.54%), Postives = 210/307 (68.40%), Query Frame = 0 Query: 1 MKLTTSNLLLPVLGLLLLLCPAT-HAFPLHSFFGSGS-----CRATTSSPTSFKVAXXXXXXXXXXXXXXXXXXXXXXXXXPCPATC----QPDAIIKRHGASPLFYLARFAMALAPSSL--MMIGAGTLSTALFAPVETVHAAAGADEVGTDTDFKIKRGAASTLNQGIVKTMTRGVNIENANFEGKDLTGVSFQQSLVRAGNFRGSKCFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTTRLTGVEIEGSDWSGTFLRKDQQQYLCNRASGVNPITKISTKESLMCPE 296 M+ T + LP LGLLLL C T F GS + +A TS+P VA P P+ + + + GASP FYLARFAMAL PSS+ + IG G L+ AL APV VHA TDTDFKIK+G+ASTLN G VKTMTRGVNIENANFEGKDLT VSFQQSLVR GNFRG+KC XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG TRLT ++IEGSDWSGTFLRKDQQ YLC RASGVNPITKISTKESL+CPE Sbjct: 41 MRRTAPSSGLP-LGLLLLTCLVTCRGFAFQPLGGSHASTLHKTKAATSAPDDVSVA----------------KRTAALMVPPLPSRSGREGKGEGGQTQLGASPTFYLARFAMALVPSSVTALGIGFGALAPALVAPVPAVHAQ-------TDTDFKIKKGSASTLNSGTVKTMTRGVNIENANFEGKDLTTVSFQQSLVRDGNFRGAKCLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGATRLTDIQIEGSDWSGTFLRKDQQTYLCKRASGVNPITKISTKESLLCPE 323
BLAST of NO07G03120 vs. NCBI_GenBank
Match: XP_002292269.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED90244.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 96.3 bits (238), Expect = 1.700e-16 Identity = 96/166 (57.83%), Postives = 114/166 (68.67%), Query Frame = 0 Query: 131 AAAGADEVGTDTDFKIKRGAASTLNQGIVKTMTRGVNIENANFEGKDLTGVSFQQSLVRAGNFRGSKCFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTTRLTGV-EIEGSDWSGTFLRKDQQQYLCNR--ASGVNPITKISTKESLMC 294 AA D ++ K+ G ASTL G ++TRGVN++N+NF ++L GV+FQQS+VR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G T GV +IEGSDWS T LRKDQQ+YLCN A G NP+T ++T+ESLMC Sbjct: 88 AAQNGDGASLASNAKLTTGGASTLQSGRTISITRGVNLDNSNFSNQNLKGVAFQQSIVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVKDMYVSGATLFEGVKDIEGSDWSETQLRKDQQKYLCNHPTAKGTNPVTGVNTRESLMC 253
BLAST of NO07G03120 vs. NCBI_GenBank
Match: XP_005836701.1 (hypothetical protein GUITHDRAFT_135885 [Guillardia theta CCMP2712] >EKX49721.1 hypothetical protein GUITHDRAFT_135885 [Guillardia theta CCMP2712]) HSP 1 Score: 95.5 bits (236), Expect = 2.900e-16 Identity = 108/216 (50.00%), Postives = 138/216 (63.89%), Query Frame = 0 Query: 78 PATCQPDAIIKRHGASPLFYLARFAMALAPSSLMMIGAGTLSTALFAPVETVHAAAGADEVGTDTDFKIKRGAASTLNQGIVKTMTRGVNIENANFEGKDLTGVSFQQSLVRAGNFRGSKCFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTTRLTGVEIEGSDWSGTFLRKDQQQYLCNRASGVNPITKISTKESLMC 294 P T A ++ + F +FA++LA S ++ +G P+ G+ FK+ +GAAST + G +T+TRG +E +NF+G++L G+SFQQS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T+L G+ IEG+D++ T LRKDQQ+YLC RASG NP T + TK+SL C Sbjct: 40 PVTRSHPAAVRMEADADAFDAKKFAVSLALGSALLFSSG-------MPIPAFAQQGGS--------FKVLKGAASTQDSGSRRTITRGALLEGSNFDGQNLPGISFQQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKLDGINIEGADFTDTELRKDQQRYLCKRASGTNPKTGVDTKDSLRC 240
BLAST of NO07G03120 vs. NCBI_GenBank
Match: OEU15753.1 (hypothetical protein FRACYDRAFT_187021 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 85.1 bits (209), Expect = 3.900e-13 Identity = 93/185 (50.27%), Postives = 117/185 (63.24%), Query Frame = 0 Query: 119 STALFAPVETVHAAAGADEV-----GTDTDFKIKRGAASTLNQGIVKTMTRGVNIENANFEGKDLTGVSFQQSLVRAGNFRGSKCFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTTRLTGV-EIEGSDWSGTFLRKDQQQYLCNR--ASGVNPITKISTKESLMCPE 296 + A FA V T+ A V T + KI G ASTL G +TRGVN++ ++F ++L GV+FQQS+VR N XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G+T G+ +IEGSDWS T+LR DQ++ LC + G NP+T ++T+ESLMC + Sbjct: 3 AVAAFALVSTLSFTEPAFAVEGGGATTAANAKITTGGASTLQSGRTIAITRGVNLDRSDFSNQNLKGVAFQQSIVRDSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTIMREVYVSGSTLFEGIKDIEGSDWSETYLRADQKKLLCEHPTSKGTNPVTGVNTRESLMCKD 187
BLAST of NO07G03120 vs. NCBI_GenBank
Match: CBJ27829.1 (Thylakoid lumenal 15 kDa protein, chloroplast precursor (p15) [Ectocarpus siliculosus]) HSP 1 Score: 82.4 bits (202), Expect = 2.600e-12 Identity = 108/202 (53.47%), Postives = 132/202 (65.35%), Query Frame = 0 Query: 102 AMALAPSSLMMIGAGTLSTALFAPVETVHAAAGADEVGTD-------TDFKIKRGAASTLNQGIVKTMTRGVNIENANFEGKDLTGVSFQQSLVRAGNFRGSKCFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTTRLTGVEIEGSDWSGTFLRKDQQQYLC--NRASGVNPITKISTKESLMCP 295 A P+ L+ + T + L +P A GA V D +D K+ GAAST ++G KT+TRGVNIENA++ KDL+ VSFQQSLV XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++ IEG+D++ TFLRKDQ +YLC A G NP++ + T++SL CP Sbjct: 45 AARCVPAVLLGVTLTTSAPLLDSPAAHT-AVLGASPVFADDKGMSSVSDSKLSVGAASTGDKGARKTVTRGVNIENADYHDKDLSSVSFQQSLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKMEPAIIEGADFTDTFLRKDQVRYLCGLETAKGTNPVSGVDTRDSLGCP 245
BLAST of NO07G03120 vs. NCBI_GenBank
Match: XP_005537590.1 (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >BAM81554.1 hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 73.9 bits (180), Expect = 9.100e-10 Identity = 102/198 (51.52%), Postives = 121/198 (61.11%), Query Frame = 0 Query: 98 LARFAMALAPSSLMMIGAGTLSTALFAPVETVHAAAGADEVGTDTDFKIKRGAASTLNQGIVKTMTRGVNIENANFEGKDLTGVSFQQSLVRAGNFRGSKCFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTTRLTGVEIEGSDWSGTFLRKDQQQYLCNRASGVNPITKISTKESLMCPE 296 L FA A A +LM + + L+ P A A+EV FK+ G ASTL G K +TRGVN+E ANF + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G T+L G++IEGSDW+ LR DQ++ LC RASG NP+T I+TK+SL C + Sbjct: 137 LRSFATA-ALVALMAVSSFNSPLKLYRP-------AFAEEV-----FKVPGGGASTLATGTSKIVTRGVNLEGANFAKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVGQTKLEGIQIEGSDWTDVLLRPDQRRLLCKRASGENPVTHIATKDSLGCAD 321
BLAST of NO07G03120 vs. NCBI_GenBank
Match: GAX17506.1 (hypothetical protein FisN_5Hh159 [Fistulifera solaris]) HSP 1 Score: 70.5 bits (171), Expect = 1.000e-8 Identity = 82/176 (46.59%), Postives = 101/176 (57.39%), Query Frame = 0 Query: 123 FAPVETVHAAAGADEVGTDT-DFKIKRGAASTLNQGIVKTMTRGVNIENANFEGKDLTGVSFQQSLVRAGNFRGSKCFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTTRLTGV-EIEGSDWSGTFLRKDQQQYLCNR--ASGVNPITKISTKESLMCP 295 F V A +D D+ + KI++G ASTL G ++TRGVN++ +NF XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G+T G+ +IE SDW+ T+LR DQQ+YLCN A G NP+T + T+ESLMCP Sbjct: 28 FCAAAVVATLACSDPSWADSGEMKIQKGGASTLQSGRTISITRGVNLDGSNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRNAVAREMYVSGSTLFEGIKDIENSDWTDTYLRADQQKYLCNHPTAKGTNPVTGVDTRESLMCP 203
BLAST of NO07G03120 vs. NCBI_GenBank
Match: XP_002178949.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC49647.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 69.7 bits (169), Expect = 1.700e-8 Identity = 82/130 (63.08%), Postives = 97/130 (74.62%), Query Frame = 0 Query: 168 IENANFEGKDLTGVSFQQSLVRAGNFRGSKCFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTTRLTGV-EIEGSDWSGTFLRKDQQQYLCNR--ASGVNPITKISTKESLMCP 295 ++N+NF ++L GV+FQQS+VR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G T GV ++EGSDWS T+LR DQ++ LCN A G NP+T + T+ESLMCP Sbjct: 1 LDNSNFSKQNLKGVAFQQSIVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYVSGATIFDGVKDVEGSDWSETYLRADQKKLLCNHPTAKGTNPVTGVDTRESLMCP 130
BLAST of NO07G03120 vs. NCBI_GenBank
Match: GAX13937.1 (hypothetical protein FisN_5Lh159 [Fistulifera solaris]) HSP 1 Score: 69.3 bits (168), Expect = 2.200e-8 Identity = 87/196 (44.39%), Postives = 111/196 (56.63%), Query Frame = 0 Query: 110 LMMIGAGTLSTALFAPVETVHAAAG-------ADEVGTDT-DFKIKRGAASTLNQGIVKTMTRGVNIENANFEGKDLTGVSFQQSLVRAGNFRGSKCFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTTRLTGV-EIEGSDWSGTFLRKDQQQYLCNR--ASGVNPITKISTKESLMCP 295 L++ A ++ + AP E AA +D D+ + KI++G ASTL G ++TRGVN++ +NF XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G+T G+ +IE SDW+ T+LR DQQ+YLCN A G NP+T + T+ESLMCP Sbjct: 8 LIVFAAPAVAFQIPAPCERFFCAAAVVATLACSDPSWADSGEMKIQKGGASTLQSGRTISITRGVNLDGSNFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNAVAREMYVSGSTLFEGIKDIENSDWTDTYLRADQQKYLCNHPTAKGTNPVTGVDTRESLMCP 203
BLAST of NO07G03120 vs. NCBI_GenBank
Match: OSX68701.1 (hypothetical protein BU14_2373s0001 [Porphyra umbilicalis]) HSP 1 Score: 66.6 bits (161), Expect = 1.500e-7 Identity = 29/49 (59.18%), Postives = 37/49 (75.51%), Query Frame = 0 Query: 246 TTRLTGVEIEGSDWSGTFLRKDQQQYLCNRASGVNPITKISTKESLMCP 295 TT+L GV I G+D++ LRKDQQ+YLC+ ASG N +T + T ESLMCP Sbjct: 19 TTKLDGVSIVGADFTDVLLRKDQQRYLCSIASGTNEVTGVDTAESLMCP 67 The following BLAST results are available for this feature:
BLAST of NO07G03120 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 11
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G03120 ID=NO07G03120|Name=NO07G03120|organism=Nannochloropsis oceanica|type=gene|length=2465bpback to top protein sequence of NO07G03120.2 >NO07G03120.2-protein ID=NO07G03120.2-protein|Name=NO07G03120.2|organism=Nannochloropsis oceanica|type=polypeptide|length=281bpback to top protein sequence of NO07G03120.1 >NO07G03120.1-protein ID=NO07G03120.1-protein|Name=NO07G03120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=296bpback to top Synonyms
Publications
|