NO07G03110, NO07G03110 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G03110 vs. NCBI_GenBank
Match: EWM27033.1 (Peptidase S54, rhomboid domain protein [Nannochloropsis gaditana]) HSP 1 Score: 471.9 bits (1213), Expect = 1.900e-129 Identity = 278/387 (71.83%), Postives = 309/387 (79.84%), Query Frame = 0 Query: 2 LPAHWQS-GAPQPQRYK-----PWTSMSSQQQQQPTRLQETLGKIPLCTTLITLLCLILQLCVVFLNWNLNEYSISPAAVVYDREYYRLITSAYFHLGFFHIAMNMLSFVGIGAWLEIKMGTLYFFLTILFSTVLTNGLYIGICFFLAAITHRDQWLFYSSIGFSGVIFTLAVLESHSSPPNATRSIMGMCQVPSRAYPWVLLIIIQLMLPHISFVGHLSGLLVGILQSYGCIAFLFPSAALLNKLEGSSACACLTRFPQYILCPDQADHILPRGSDVLQCCAC--MRSGSPRRFTGSGVSGTAXXXXXXXXXXXXXXXXXXPTTVQNAGRNSAATAGRGLAQASPTRPGGRGMGGWSRLGEGGNGGGEE-VEIVYDGNQLNNTPRQ 380 L + W+S + P R K ++++ QQQQPTRLQETL KIPLCTTL TLLCLILQLCVV L WN+N +SIS AAVVYD EYYRL TSAYFHLG FHIAMNMLSFVGIGAWLE++MGT+YFFLTIL+ST+LTN LYIGIC FLAA+T+ QWLFY+S GFSGVIFTLAVLESHSSPPNATRSIMGMCQVP+RAYPWVLLIIIQL+LP ISFVGHLSGLL+G+LQSYGC+AFLFPS+ LN+LE S A AC+TR PQY+LCPD++DH+LPRG DVLQCC C S SPRRF GSGVS XXXXXXXXXXXXXXXXX TVQN +A A QASPTR G G GGWSRLG+ G GGEE VEI YDG Q RQ Sbjct: 4 LASQWRSRSSASPHRQKLSAGRGYSTLGPMQQQQPTRLQETLSKIPLCTTLTTLLCLILQLCVVILGWNVNLFSISYAAVVYDHEYYRLFTSAYFHLGLFHIAMNMLSFVGIGAWLEMRMGTMYFFLTILWSTILTNSLYIGICSFLAAVTNHQQWLFYASAGFSGVIFTLAVLESHSSPPNATRSIMGMCQVPARAYPWVLLIIIQLLLPRISFVGHLSGLLIGVLQSYGCLAFLFPSSGNLNRLERSPAFACMTRCPQYMLCPDESDHVLPRGVDVLQCCPCSSRASSSPRRFVGSGVS----XXXXXXXXXXXXXXXXXXXTVQNP--PTATVAAGATNQASPTRLG--GAGGWSRLGDSGRMGGEEDVEIAYDGQQERKCKRQ 382
BLAST of NO07G03110 vs. NCBI_GenBank
Match: CBN78760.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 175.3 bits (443), Expect = 3.800e-40 Identity = 96/211 (45.50%), Postives = 135/211 (63.98%), Query Frame = 0 Query: 33 LQETLGKIPLCTTLITLLCLILQLCVVFLNWNLNEYSISPAAVVYDREYYRLITSAYFHLGFFHIAMNMLSFVGIGAWLEIKMGTLYFFLTILFSTVLTNGLYIGICFFLAA-ITHRDQWLFYSSIGFSGVIFTLAVLESHSSPPNATRSIMGMCQVPSRAYPWVLLIIIQLMLPHISFVGHLSGLLVGILQSYGCIAFLFPSAALLNKLE 243 L E G++PLCT LC+ILQ CV N N+ Y + P+ ++Y EYYR+IT A H G HI NM+SF+ IG+ LE+ GTL TIL+S +L ++ G + + +TH ++ S+GFSGVIFTLA++ES+ S TRS+ GM +VP+R YPWVLL+++ + + ISFVGHLSG+LVG++ YG L PS A ++E Sbjct: 6 LGEVAGQVPLCTLAFATLCIILQGCVFVFNTNIGNYVLIPSRIIYLGEYYRVITGALLHGGLMHIVFNMMSFLSIGSSLEVAFGTLSLLFTILWSMILAGVVHCGAEWVMTVWVTHDPTYVNQPSVGFSGVIFTLALMESYRS-TQPTRSVFGMMRVPTRMYPWVLLVLLSVFMRDISFVGHLSGILVGVMHVYGLTKPLMPSPAFYIEME 215
BLAST of NO07G03110 vs. NCBI_GenBank
Match: XP_002290394.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92146.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 166.4 bits (420), Expect = 1.700e-37 Identity = 97/231 (41.99%), Postives = 144/231 (62.34%), Query Frame = 0 Query: 31 TRLQETLGKIPLCTTLITLLCLILQLCVVFLNWNLNEYSISPAAVVYDREYYRLITSAYFHLGFFHIAMNMLSFVGIGAWLEIKMGTLYFFLTILFSTVLTNGLYIGICFFLAAITHRDQWLFYSSIGFSGVIFTLAVLESHSSPPNATRSIMGMCQVPSRAYPWVLLIIIQLMLPHISFVGHLSGLLVGILQSYGCIAFLFPSAALLNKLEGSSACACLTRFPQYILCPD 262 +R ETL IPL T I LC + L + + L+ +++ P V+Y EYYR+ITS+ FH HI MNM+S + IG LE + GT LT+L+ +LT+ +Y+ + L ++ ++ S+GFSGVIF L+VLE++ + PN +RS+ GM QV S+ YPW LL+++Q ++P ISF+GHLSG+L+G LQ +G +FPS A L LE SA +T P ++ P+ Sbjct: 2 SRASETLASIPLATLSIMALCCFVYLYQLAFDPTLHNFTMCPRLVLYMNEYYRIITSSLFHGSLMHIGMNMMSTMAIGTSLEKRFGTFTMALTVLWGVLLTSVIYMTTSWLLYVGFGYEKMMYQHSLGFSGVIFQLSVLEANLT-PNRSRSVFGMIQVSSKMYPWCLLVVLQFIMPQISFLGHLSGILLGTLQLHGADK-IFPSDAYLQDLETWSALEAITTKPGFVKMPE 230
BLAST of NO07G03110 vs. NCBI_GenBank
Match: XP_002177764.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50578.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 164.9 bits (416), Expect = 5.100e-37 Identity = 109/261 (41.76%), Postives = 151/261 (57.85%), Query Frame = 0 Query: 31 TRLQETLGKIPLCTTLITLLCLILQLCV-VFLNWNLNEYSISPAAVVYDREYYRLITSAYFHLGFFHIAMNMLSFVGIGAWLEIKMGTLYFFLTILFSTVLTNGLYIGICFFLAAITHRDQWLFYSSIGFSGVIFTLAVLESHSSPPNATRSIMGMCQVPSRAYPWVLLIIIQLMLPHISFVGHLSGLLVGILQSYGCIAFLFPSAALLNKLEGSSACACLTRFPQYILCPDQADHILPRGSDVLQCCACMRSGS--PRRF 289 +R E L + P TT I LC+IL + V L+ NL +++ P V+Y E YR+ TSA FH H+AMNM++ + IG+ LE + GT L IL+S +LT LYIGI FLA I ++Q + S+GFSGVIF L+VLES+ + +RS+ G VPS YPWVLL+ +Q+ +P +SF GHL G+LVG LQ YG + ++ L +++ S LTR Q+ CP A+ G +R GS RRF Sbjct: 2 SRFNELLQRTPQTTTGIIALCVILHVVTKVLLDLNLRIFTLCPQLVIYRLEIYRIATSALFHGNIMHLAMNMMTTLAIGSLLEKRFGTFRLLLIILWSILLTGILYIGIALFLAIIIQKNQLMRQHSVGFSGVIFHLSVLESNLG-THQSRSVFGFFDVPSYLYPWVLLVGLQIFMPGLSFTGHLVGILVGTLQLYGGLNWILWGEERLKRVDNWSRLDFLTR--QHNFCPTTAETGCQVGGQSSSLMGSVRQGSVIVRRF 259
BLAST of NO07G03110 vs. NCBI_GenBank
Match: OEU15621.1 (hypothetical protein FRACYDRAFT_159831, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 149.4 bits (376), Expect = 2.200e-32 Identity = 85/212 (40.09%), Postives = 131/212 (61.79%), Query Frame = 0 Query: 32 RLQETLGKIPLCTTLITLLCLILQLCVVFLNWNLNEYSISPAAVVYDREYYRLITSAYFHLGFFHIAMNMLSFVGIGAWLEIKMGTLYFFLTILFSTVLTNGLYIGICFFLAAITHRDQWLFYSSIGFSGVIFTLAVLESHSSPPNATRSIMGMCQVPSRAYPWVLLIIIQLMLPHISFVGHLSGLLVGILQSYGC-IAFLFPSAALLNKLE 243 R + L ++P T + +C+ L + + + W++ +++ P +++ EYYR+ TS +FH HI MNMLS I LE ++GTL ++I +S +LT+ +YI I + D W++ SIGFSG+IF L+VLES+ P RS+ G VPS YPW LL+I+QL++P++SF+GHLSG+L G L+ YG FLF S + L ++E Sbjct: 2 RSTDALRQLPPATLGVITICVFLFIIQMTMTWDIQLFTMCPRLILFMNEYYRIFTSVFFHANLMHIGMNMLSTSTISTVLEKRIGTLRLIVSIWWSILLTSTIYIIIAYXXXXXXGYDTWMYQHSIGFSGIIFHLSVLESYLHP--GQRSVFGFFSVPSFVYPWALLLILQLIMPNLSFLGHLSGILTGSLEYYGVWDRFLFLSDSFLIEIE 211
BLAST of NO07G03110 vs. NCBI_GenBank
Match: GAX11446.1 (hypothetical protein FisN_22Lh130 [Fistulifera solaris]) HSP 1 Score: 139.8 bits (351), Expect = 1.700e-29 Identity = 85/228 (37.28%), Postives = 131/228 (57.46%), Query Frame = 0 Query: 31 TRLQETLGKIPLCTTLITLLCLILQLCVVFLNWNLNEYSISPAAVVYDREYYRLITSAYFHLGFFHIAMNMLSFVGIGAWLEIKMGTLYFFLTILFSTVLTNGLYIGICFFLAAITHRDQWLFYSSIGFSGVIFTLAVLESHSSPPNATRSIMGMCQVPSRAYPWVLLIIIQLMLPHISFVGHLSGLLVGILQSYGCI-AFLFPSAALLNKLEGSSACACLTRFPQYI 258 +RL E + +P T + +C ++ C + L +++ P +V E YR++T A+FH F HIA+NMLS I + +E ++GT Y L+ S V+ +YIGI A+ + D +L + ++GFSGV+F + VL+ SS + +RS+ GM +VP YP+ LL+++QL+LP+ISF GHLSG+L G L S GC L L +E LTR P ++ Sbjct: 2 SRLNEEMQLVPPSTLTVIAVCFVVYGCQTVFDLPLQTFTLCPQRIVKHWEVYRILTHAFFHANFLHIALNMLSAFAISSSVEKRVGTFYHLLSTFLSIVMIPMVYIGISLLFLAMGNNDLYLQH-AVGFSGVLFHMLVLDVTSS--SQSRSLFGMVEVPPLFYPFALLLVLQLILPNISFYGHLSGILTGFLHSAGCFDGILITDERRLQTMEEWPVVNVLTRSPSFV 226
BLAST of NO07G03110 vs. NCBI_GenBank
Match: GAX16013.1 (rhomboid domain-containing protein 1 [Fistulifera solaris]) HSP 1 Score: 135.2 bits (339), Expect = 4.300e-28 Identity = 84/228 (36.84%), Postives = 129/228 (56.58%), Query Frame = 0 Query: 31 TRLQETLGKIPLCTTLITLLCLILQLCVVFLNWNLNEYSISPAAVVYDREYYRLITSAYFHLGFFHIAMNMLSFVGIGAWLEIKMGTLYFFLTILFSTVLTNGLYIGICFFLAAITHRDQWLFYSSIGFSGVIFTLAVLESHSSPPNATRSIMGMCQVPSRAYPWVLLIIIQLMLPHISFVGHLSGLLVGILQSYGCI-AFLFPSAALLNKLEGSSACACLTRFPQYI 258 +RL E + +P T + C+++ C LN L +++ P +V E YR++T A+FH F HIA+NMLS I + +E ++GT+Y + S V+ + +YI I I + D +L + S+GFSGV+F + VL+ SS + RS+ G+ +VP YP+ LL ++QL+LP+ISF GHLSG++ G L S GC L L +E LTR P ++ Sbjct: 2 SRLNEEVQLVPPSTLTVIAFCVVVYGCQTILNLPLQTFTLCPQRIVEHWEVYRILTHAFFHANFLHIALNMLSAFAISSAVEKRVGTVYHLFSTFMSIVMISMVYIAISLLFLVIGNNDLYLQH-SVGFSGVLFHMLVLDVTSS--SQPRSLFGIIEVPPLFYPFALLSVLQLILPNISFYGHLSGIVTGFLHSAGCFDGILMIDERRLQTMEEWPFVNILTRSPSFV 226
BLAST of NO07G03110 vs. NCBI_GenBank
Match: EJK46866.1 (hypothetical protein THAOC_34449 [Thalassiosira oceanica]) HSP 1 Score: 129.8 bits (325), Expect = 1.800e-26 Identity = 72/157 (45.86%), Postives = 101/157 (64.33%), Query Frame = 0 Query: 105 VGIGAWLEIKMGTLYFFLTILFSTVLTNGLYIGICFFLAAITHRDQWLFYSSIGFSGVIFTLAVLESHSSPPNATRSIMGMCQVPSRAYPWVLLIIIQLMLPHISFVGHLSGLLVGILQSYGCIAFLFPSAALLNKLEGSSACACLTRFPQYILCPD 262 + IG+ LE ++GT+ LTI F +LT +YI I + L A+ ++ + + GFSGVIF L+VLES+ S PN TRS+ G+ V SR YPW LL+ IQL++PHISF+GHLSG+L+G LQ +G + LFP L + E S + L P Y+ P+ Sbjct: 1 MAIGSSLERQIGTIMMALTIFFGILLTGAIYISISWLLFAVFGLEKMMLQHAAGFSGVIFQLSVLESNLS-PNRTRSVFGVFTVSSRMYPWALLVAIQLVMPHISFLGHLSGILIGSLQYHGALNVLFPREEYLQECETSERLSVLRAQPSYVPTPE 156
BLAST of NO07G03110 vs. NCBI_GenBank
Match: AIY60662.1 (rhomboid protein Acoca_RBL15, partial [Acorus calamus]) HSP 1 Score: 129.0 bits (323), Expect = 3.100e-26 Identity = 79/241 (32.78%), Postives = 136/241 (56.43%), Query Frame = 0 Query: 30 PTRLQETLGKIPLCTTLITLLCLILQLCVVFLNW-NLNEYSISPAAVVYDREYYRLITSAYFHLGFFHIAMNMLSFVGIGAWLEIKMGTLYFFLTILFSTVLTNGLYIGICFFLAA---ITHRDQWLFYSSIGFSGVIFTLAVLESHSSPPNATRSIMGMCQVPSRAYPWVLLIIIQLMLPHISFVGHLSGLLVGILQSYGCIAFLFPSAALLNKLEGSSACACLTRFPQYILCPDQADHI 267 PTRL + IP T+ + ++C ++ L +F+ + + E P+ +V + YR+ T+ FH H+ NM++ V +G+ LE MG++ L ++F L+N ++ LAA + H ++ +IGFSG+IF++ V+E+ S +RS+ G+ +PS+ YPW+LL++ QL+ ++S +GHL G+L G +YG +L P + +E SS A R P++ILC A H+ Sbjct: 42 PTRLSQWWVGIPFITSGVVVVCGLIYLVCLFVGYDSFAEICFLPSEIVSRFQVYRIFTAVIFHGSMLHVLFNMMALVPLGSELERIMGSIR-LLYLMFLLALSNAIFHLTIALLAAYNPLRHFPYFMEECAIGFSGIIFSMIVIETSLSGAQ-SRSVFGLFNIPSKWYPWILLLLFQLLATNVSLLGHLCGILSGFAYTYGFFNYLLPGPMFYSAIENSSMLASCVRRPKFILCSGGASHV 280
BLAST of NO07G03110 vs. NCBI_GenBank
Match: XP_008441963.1 (PREDICTED: rhomboid-like protein 15 isoform X2 [Cucumis melo]) HSP 1 Score: 125.6 bits (314), Expect = 3.400e-25 Identity = 80/233 (34.33%), Postives = 133/233 (57.08%), Query Frame = 0 Query: 30 PTRLQETLGKIPLCTTLITLLCLILQLCVVFLNW-NLNEYSISPAAVVYDREYYRLITSAYFHLGFFHIAMNMLSFVGIGAWLEIKMGTL-YFFLTILFS-TVLTNGLYIGICFFLAAITHRDQWLFYSSIGFSGVIFTLAVLESHSSPPNATRSIMGMCQVPSRAYPWVLLIIIQLMLPHISFVGHLSGLLVGILQSYGCIAFLFPSAALLNKLEGSSACACLTRFPQYILC 260 PTR+ + IP T+ I L+C + L + + + + E PAA++ + YR+ TS FH H+ NML+ V +G+ LE MG++ +LTIL + + T L+I + H D + +IGFSG++F+L V+E+ S +RS+ G+ VP++ Y W+LL++ QL++ ++SF+GHL G++ G YG + FL P + + +E SS + R P++ILC Sbjct: 12 PTRVGQWWEGIPFFTSSIILICGTIYLVCLLVGYDSFVEVCFLPAAILSHFQVYRIFTSVLFHGSLLHVLFNMLALVPLGSELERIMGSIRMLYLTILLAISNATIHLFIAVVMAHNPFHHYDNLMNECAIGFSGILFSLIVIETSLSGIQ-SRSVFGLFNVPAQWYVWILLVVFQLLMTNVSFLGHLCGIITGFAYIYGLLNFLLPGTSFYSAMESSSLLSSCVRRPKFILC 243 The following BLAST results are available for this feature:
BLAST of NO07G03110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G03110 ID=NO07G03110|Name=NO07G03110|organism=Nannochloropsis oceanica|type=gene|length=1614bpback to top protein sequence of NO07G03110.1 >NO07G03110.1-protein ID=NO07G03110.1-protein|Name=NO07G03110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=383bpback to top Synonyms
Publications
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