NO07G03100, NO07G03100 (gene) Nannochloropsis oceanica

Overview
NameNO07G03100
Unique NameNO07G03100
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1122
Alignment locationchr7:863501..864622 +

Link to JBrowse

Properties
Property NameValue
DescriptionWd repeat-containing protein 82
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:863501..864622 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005847mRNA cleavage and polyadenylation specificity factor complex
GO:0048188Set1C/COMPASS complex
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR037867Swd2
IPR001680WD40_repeat
Homology
BLAST of NO07G03100 vs. NCBI_GenBank
Match: EWM27047.1 (wd repeat-containing protein 82 [Nannochloropsis gaditana])

HSP 1 Score: 581.3 bits (1497), Expect = 2.200e-162
Identity = 283/365 (77.53%), Postives = 314/365 (86.03%), Query Frame = 0
Query:    4 GSSGMSGLEAVRVQELQRGCVVSGTAPVTCLDYHREGEYLVTAAEDGTVHLINALEGKARKKLFCKKYGVELARFTHHAQSVLCSSRPSASQTASALGTTAHDIRYLSLYDNQYLRFFSGHEARVTALAMSYTDDRFMSASVDGTVRIWTLQQPKCLGQGNIQIGGGGSYSNSSSSPCPVLAEFDPSGLVFAVCAQVQDRHLLKLYDARKFSEGAFENFGISENELRQTLLAQQPTIDPEVARKLVQAPWIDMSFSADGKNLLVSTKGGMTLVIDTYDLQVTRFLTGYKNEKGLNITACYTSDVNHILTGSEEGEVCVFDATEERVMDGVVCRLSGHTGPVRQVKCNPVYEQVASACNHVVLWIT 369
            G+     LEAVRV+EL+RGCVV+G APV+CLDYHREGEYLV  ++D +V LINALEGK RKK+FCKKYGVELARFTHH Q ++CSSR S +Q A+  G++AHDIRYLSLYDNQYLRFFSGHEARVT LAMSYTDDRF+SAS+DGTVRIWTLQQPKCLG G+I  G GGS  N+     PVLAEFDPSGLVFA CAQV DRHLLKLYDARKFSEGAFE+FGISE ELR+TL  QQPTIDPEVARKLVQAPW DM FSADGKNLLVST+ GMTLVIDTYDLQ+TRFLTGY+N  GL+ITACYT D  HILTGSE+G VCVFDA EER MDG+V RL GH  PV+QV+CNPVYEQVAS C+HVVLWI+
Sbjct:   34 GARSGGALEAVRVRELERGCVVAGAAPVSCLDYHREGEYLVATSDDDSVRLINALEGKERKKVFCKKYGVELARFTHHPQGIICSSRQSTNQAAAPTGSSAHDIRYLSLYDNQYLRFFSGHEARVTGLAMSYTDDRFLSASMDGTVRIWTLQQPKCLGLGSIG-GDGGSNHNAQ----PVLAEFDPSGLVFAACAQVHDRHLLKLYDARKFSEGAFESFGISEAELRETLQQQQPTIDPEVARKLVQAPWTDMHFSADGKNLLVSTRAGMTLVIDTYDLQITRFLTGYRNTGGLDITACYTPDAGHILTGSEDGNVCVFDAGEERTMDGIVHRLEGHPRPVQQVRCNPVYEQVASGCSHVVLWIS 393          
BLAST of NO07G03100 vs. NCBI_GenBank
Match: CBJ30954.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 249.6 bits (636), Expect = 1.500e-62
Identity = 130/353 (36.83%), Postives = 199/353 (56.37%), Query Frame = 0
Query:   16 VQELQRGCVVSGTAPVTCLDYHREGEYLVTAAEDGTVHLINALEGKARKKLFCKKYGVELARFTHHAQSVLCSSRPSASQTASALGTTAHDIRYLSLYDNQYLRFFSGHEARVTALAMSYTDDRFMSASVDGTVRIWTLQQPKCLGQGNIQIGGGGSYSNSSSSPCPVLAEFDPSGLVFAVCAQVQDRHLLKLYDARKFSEGAFENFGISENELRQTLLAQQPTIDPEVARKLVQAPWIDMSFSADGKNLLVSTKGGMTLVIDTYDLQVTRFLTGYKNEKGLNITACYTSDVNHILTGSEEGEVCVFDATEERVMDGVVCR-LSGHTGPVRQVKCNPVYEQVASACNHVVLWI 368
            V  +  G V  G + VT +D+H +GE  V A  D +V LINA+EG+ RK +  +KYG  + R+THH Q+VL SS    +          H +RYLSLYDN++LRFF+GH  +V ++AMS TDD FM+ S D TVR+W L +P+CL       G G  Y             +D  GLVFA        +++KLYDAR + +G F+ F +   ++ +  + +   +  + AR L  A W  M FSADG+++L++T   + L +  ++  V +  TG++N+    + AC+T +  ++L+GSE+  +  +     R  DG + + L GH+  V +V C+P YE +ASAC +  LWI
Sbjct:   28 VPAMAMGQVFPGESVVTSMDFHEDGELCVAANSDKSVTLINAVEGRKRKTIHTQKYGCGVVRYTHHDQTVLVSSDADGAD---------HAVRYLSLYDNRFLRFFTGHTDKVVSIAMSPTDDHFMTGSADKTVRLWHLSRPQCLAVLEFPPGHGTPY-----------VAYDQQGLVFAAATSTGKANIIKLYDARNYEKGPFDTFTVEHKKVEE-FIVKSKEMRSKKARALSLARWKSMKFSADGQSILIATDASLVLTLHAFEGDVKQVFTGHQNDLHSELDACFTPNAEYVLSGSEDSGIYAW-----RAEDGKLAKILKGHSSAVGRVLCSPKYEVIASACTNTALWI 354          
BLAST of NO07G03100 vs. NCBI_GenBank
Match: XP_007888475.1 (PREDICTED: WD repeat-containing protein 82 [Callorhinchus milii])

HSP 1 Score: 216.1 bits (549), Expect = 1.900e-52
Identity = 127/360 (35.28%), Postives = 189/360 (52.50%), Query Frame = 0
Query:   11 LEAVRVQELQRGCVVSGTAPVTCLDYHREGEYLVTAAEDGTVHLINALEGKARKKLFCKKYGVELARFTHHAQSVLCSSRPSASQTASALGTTAHDIRYLSLYDNQYLRFFSGHEARVTALAMSYTDDRFMSASVDGTVRIWTLQQPKCLGQGNIQIGGGGSYSNSSSSPCPVLAEFDPSGLVFAVCAQVQDRHLLKLYDARKFSEGAFENFGISENELRQTLLAQQPTIDPEVARKLVQAPWIDMSFSADGKNLLVSTKGGMTLVIDTYDLQVTRFLTGYKNEKGLNITACYTSDVNHILTGSEEGEVCVFDA---TEERVMDGVVCRLSGHTGPVRQVKCNPVYEQVASACNHVVLWI 368
            L + RV ++ R      T  + C D+   GE L+++++D ++ L +  EGK ++ L+ KKYGV+L R+TH A +V+ SS                 IRYLSL+DN+Y+R+F GH  RV AL MS  DD FMS+S+D T+R+W L+ P C  QG + + G  + S            FDP GL+FA      +  ++KLYD R F +G F  F +                            W  + FS DGK +LVST GGM  +ID +   V +   GY N KG+++ A +T D   ++ GSE+G+V V++A    +  V+DG       HTGPV  ++ NP +   ASAC+++  W+
Sbjct:    8 LRSFRVAKVFR----ENTDKINCFDFSPNGETLISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSS-----------NKIDDTIRYLSLHDNKYIRYFHGHSKRVVALCMSPVDDTFMSSSLDKTIRLWDLRSPNC--QGLMHLQGRPTCS------------FDPEGLIFAAGV---NSEIIKLYDLRSFDKGPFATFKMQYER---------------------TCEWTGLKFSNDGKLMLVSTNGGMVRLIDAFKGAVLQTFAGYNNNKGISLEASFTPDSQFVIIGSEDGKVHVWNAESGLKVAVLDG------KHTGPVSCLQFNPKFMTFASACSNMAFWL 308          
BLAST of NO07G03100 vs. NCBI_GenBank
Match: XP_020366429.1 (WD repeat-containing protein 82 [Rhincodon typus])

HSP 1 Score: 215.3 bits (547), Expect = 3.200e-52
Identity = 127/360 (35.28%), Postives = 189/360 (52.50%), Query Frame = 0
Query:   11 LEAVRVQELQRGCVVSGTAPVTCLDYHREGEYLVTAAEDGTVHLINALEGKARKKLFCKKYGVELARFTHHAQSVLCSSRPSASQTASALGTTAHDIRYLSLYDNQYLRFFSGHEARVTALAMSYTDDRFMSASVDGTVRIWTLQQPKCLGQGNIQIGGGGSYSNSSSSPCPVLAEFDPSGLVFAVCAQVQDRHLLKLYDARKFSEGAFENFGISENELRQTLLAQQPTIDPEVARKLVQAPWIDMSFSADGKNLLVSTKGGMTLVIDTYDLQVTRFLTGYKNEKGLNITACYTSDVNHILTGSEEGEVCVFDA---TEERVMDGVVCRLSGHTGPVRQVKCNPVYEQVASACNHVVLWI 368
            L + RV ++ R      T  + C D+   GE L+++++D ++ L +  EGK ++ L+ KKYGV+L R+TH A +V+ SS                 IRYLSL+DN+Y+R+F GH  RV AL MS  DD FMS+S+D T+R+W L+ P C  QG + + G  + S            FDP GL+FA      +  ++KLYD R F +G F  F +                            W  + FS DGK +LVST GGM  +ID +   V +   GY N KG+++ A +T D   ++ GSE+G+V V++A    +  V+DG       HTGPV  ++ NP +   ASAC+++  W+
Sbjct:    8 LRSFRVAKVFR----ENTDKINCFDFSPNGETLISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSS-----------NKIDDTIRYLSLHDNKYIRYFHGHSKRVVALCMSPVDDTFMSSSLDKTIRLWDLRSPNC--QGLMHLQGRPTCS------------FDPEGLIFAAGV---NSEIIKLYDLRSFDKGPFATFKMQYER---------------------TCEWTGLKFSNDGKLMLVSTNGGMVRLIDAFKGAVLQTFGGYNNNKGISLEASFTPDSQFVMIGSEDGKVHVWNAESGLKVAVLDG------KHTGPVSCLQFNPKFMTFASACSNMAFWL 308          
BLAST of NO07G03100 vs. NCBI_GenBank
Match: XP_022602468.1 (WD repeat-containing protein 82-like [Seriola dumerili])

HSP 1 Score: 212.6 bits (540), Expect = 2.100e-51
Identity = 124/341 (36.36%), Postives = 179/341 (52.49%), Query Frame = 0
Query:   31 VTCLDYHREGEYLVTAAEDGTVHLINALEGKARKKLFCKKYGVELARFTH-HAQSVLCSSRPSASQTASALGTTAHDIRYLSLYDNQYLRFFSGHEARVTALAMSYTDDRFMSASVDGTVRIWTLQQPKCLGQGNIQIGGGGSYSNSSSSPCPVLAEFDPSGLVFAVCAQVQDRHLLKLYDARKFSEGAFENFGISENELRQTLLAQQPTIDPEVARKLVQAPWIDMSFSADGKNLLVSTKGGMTLVIDTYDLQVTRFLTGYKNEKGLNITACYTSDVNHILTGSEEGEVCVF---DATEERVMDGVVCRLSGHTGPVRQVKCNPVYEQVASACNHVVLWI 368
            V C+DY   GE  +++++D  + L +  EGK  + LF KKYGV+L R+TH   Q+V+ SS        + L  T   IRYLSL DN+Y+R+F GH ARV AL+MS  DD F+S S+D T+RIW L+ P C G            +N    P   +  FDP GL+FA   + Q    +KLYD R F +G F +F    N +                       W  + FS DGK +L+ST GGM  V++ ++  V    +GY N +G+++ AC+T D   ++ GSE+G V V+      +  V+DG       H GP+  ++ NP Y   ASAC ++  W+
Sbjct:   24 VNCVDYSPNGESAISSSDDDCIVLYDIREGKPERTLFSKKYGVDLIRYTHGDTQTVVYSS--------NKLDDT---IRYLSLTDNKYIRYFPGHTARVIALSMSPVDDTFISGSLDKTIRIWDLRSPNCQG-----------LTNPLGKP---VCSFDPDGLIFAAGVESQ---AIKLYDLRAFDKGPFASFETRFNRV---------------------CDWTGLKFSNDGKQILISTNGGMIRVLNAFNGSVLHTFSGYNNSRGISLEACFTPDSQFVMIGSEDGRVHVWSTESGMKVAVLDG------KHPGPINTLQFNPRYMTFASACTNMAFWL 309          
BLAST of NO07G03100 vs. NCBI_GenBank
Match: XP_023269974.1 (WD repeat-containing protein 82-like [Seriola lalandi dorsalis])

HSP 1 Score: 212.6 bits (540), Expect = 2.100e-51
Identity = 124/341 (36.36%), Postives = 179/341 (52.49%), Query Frame = 0
Query:   31 VTCLDYHREGEYLVTAAEDGTVHLINALEGKARKKLFCKKYGVELARFTH-HAQSVLCSSRPSASQTASALGTTAHDIRYLSLYDNQYLRFFSGHEARVTALAMSYTDDRFMSASVDGTVRIWTLQQPKCLGQGNIQIGGGGSYSNSSSSPCPVLAEFDPSGLVFAVCAQVQDRHLLKLYDARKFSEGAFENFGISENELRQTLLAQQPTIDPEVARKLVQAPWIDMSFSADGKNLLVSTKGGMTLVIDTYDLQVTRFLTGYKNEKGLNITACYTSDVNHILTGSEEGEVCVF---DATEERVMDGVVCRLSGHTGPVRQVKCNPVYEQVASACNHVVLWI 368
            V C+DY   GE  +++++D  + L +  EGK  + LF KKYGV+L R+TH   Q+V+ SS        + L  T   IRYLSL DN+Y+R+F GH ARV AL+MS  DD F+S S+D T+RIW L+ P C G            +N    P   +  FDP GL+FA   + Q    +KLYD R F +G F +F    N +                       W  + FS DGK +L+ST GGM  V++ ++  V    +GY N +G+++ AC+T D   ++ GSE+G V V+      +  V+DG       H GP+  ++ NP Y   ASAC ++  W+
Sbjct:   24 VNCVDYSPNGESAISSSDDDCIVLYDIREGKPERTLFSKKYGVDLIRYTHGDTQTVVYSS--------NKLDDT---IRYLSLTDNKYIRYFPGHTARVIALSMSPVDDTFISGSLDKTIRIWDLRSPNCQG-----------LTNPLGKP---VCSFDPDGLIFAAGVESQ---AIKLYDLRAFDKGPFASFETRFNRV---------------------CDWTGLKFSNDGKQILISTNGGMIRVLNAFNGSVLHTFSGYNNSRGISLEACFTPDSQFVMIGSEDGRVHVWSTESGMKVAVLDG------KHPGPINTLQFNPRYMTFASACTNMAFWL 309          
BLAST of NO07G03100 vs. NCBI_GenBank
Match: XP_018536926.1 (PREDICTED: WD repeat-containing protein 82-like isoform X1 [Lates calcarifer])

HSP 1 Score: 212.2 bits (539), Expect = 2.700e-51
Identity = 119/340 (35.00%), Postives = 174/340 (51.18%), Query Frame = 0
Query:   31 VTCLDYHREGEYLVTAAEDGTVHLINALEGKARKKLFCKKYGVELARFTHHAQSVLCSSRPSASQTASALGTTAHDIRYLSLYDNQYLRFFSGHEARVTALAMSYTDDRFMSASVDGTVRIWTLQQPKCLGQGNIQIGGGGSYSNSSSSPCPVLAEFDPSGLVFAVCAQVQDRHLLKLYDARKFSEGAFENFGISENELRQTLLAQQPTIDPEVARKLVQAPWIDMSFSADGKNLLVSTKGGMTLVIDTYDLQVTRFLTGYKNEKGLNITACYTSDVNHILTGSEEGEVCVF---DATEERVMDGVVCRLSGHTGPVRQVKCNPVYEQVASACNHVVLWI 368
            V C+DY   GE  +++++D  + L +  EGK ++ L+ KKYGV+L R+TH     +  S      T          IRYLSL DN+Y+R+F GH ARV AL+MS  DD F+S S+D T+RIW L+ P C G            +N    P   +  FDP GL+FA   + Q    +KLYD R F +G F +F    N +                       W  + FS DGK +L+ST GGM  V++ ++  V    +GY N +G+++ AC+T D   ++ GSE+G V V+      +  V+DG       H GP+  ++ NP Y   ASAC ++  W+
Sbjct:   24 VNCVDYSPNGENAISSSDDDCIVLYDIREGKPKRTLYSKKYGVDLIRYTHGDTQTVVYSSNKVDDT----------IRYLSLVDNKYIRYFPGHTARVIALSMSPVDDTFISGSLDKTIRIWDLRSPNCQG-----------LTNPLGKP---VCSFDPDGLIFAAGVESQ---AIKLYDLRAFDKGPFASFETRFNRV---------------------CDWTGLKFSNDGKQILISTNGGMIRVLNAFNGSVLHTFSGYNNSRGISLEACFTPDSQFVMIGSEDGRVHVWSTESGMKVAVLDG------KHPGPINTLQFNPRYMTFASACTNMTFWL 309          
BLAST of NO07G03100 vs. NCBI_GenBank
Match: XP_013987398.1 (PREDICTED: WD repeat-containing protein 82-like isoform X1 [Salmo salar])

HSP 1 Score: 211.8 bits (538), Expect = 3.500e-51
Identity = 119/341 (34.90%), Postives = 182/341 (53.37%), Query Frame = 0
Query:   31 VTCLDYHREGEYLVTAAEDGTVHLINALEGKARKKLFCKKYGVELARFTHHAQSVLCSSRPSASQTASALGTTAHDIRYLSLYDNQYLRFFSGHEARVTALAMSYTDDRFMSASVDGTVRIWTLQQPKCLGQGNIQIGGGGSYSNSSSSPCPVLAEFDPSGLVFAVCAQVQDRHLLKLYDARKFSEGAFENFGISENELRQTLLAQQPTIDPEVARKLVQAPWIDMSFSADGKNLLVSTKGGMTLVIDTYDLQVTRFLTGYKNEKGLNITACYTSDVNHILTGSEEGEVCVFDATEE----RVMDGVVCRLSGHTGPVRQVKCNPVYEQVASACNHVVLWI 368
            V C+DY+  GE  +++++D ++ L +  EGK  + L+ KKYGV+L R+TH   + +  S      T          IRYLSL DN+Y+R+F GH  RV AL+MS  DD F+S S+D T+R+W L+ P C G            +N    P   +  +DP GL+FA      D  ++KLYD R F +G F +F        +TL ++                W  + FS DGK +L+ST GG   ++D ++  V    +GY N KG+++ AC+T D + ++ GSE+G V V+ +TE      V+DG       H+GP+  ++ NP Y   ASAC+++  W+
Sbjct:   24 VNCVDYNSNGESAISSSDDDSIVLYDCQEGKPIRTLYSKKYGVDLIRYTHGDANTVVYSSNKLDDT----------IRYLSLTDNKYIRYFPGHTDRVVALSMSPVDDTFISGSLDMTIRLWDLRSPNCQG-----------LTNPLGKP---VCSYDPEGLIFAAGV---DSEVIKLYDLRSFDKGPFASF--------ETLFSR-------------VCEWTGLKFSRDGKQILISTNGGAIRILDAFNGSVLHTFSGYNNSKGISLEACFTPDSDFVMIGSEDGRVHVW-STESGMKIAVLDG------KHSGPINTLQFNPKYMTFASACSNMAFWL 309          
BLAST of NO07G03100 vs. NCBI_GenBank
Match: XP_013762977.1 (WD repeat-containing protein 82 [Thecamonas trahens ATCC 50062] >KNC45997.1 WD repeat-containing protein 82 [Thecamonas trahens ATCC 50062])

HSP 1 Score: 210.7 bits (535), Expect = 7.900e-51
Identity = 120/340 (35.29%), Postives = 180/340 (52.94%), Query Frame = 0
Query:   34 LDYHREGEYLVTAAEDGTVHLINALEGKARKKLFCKKYGVELARFTHHAQSVLCSSRPSASQTASALGTTAHDIRYLSLYDNQYLRFFSGHEARVTALAMSYTDDRFMSASVDGTVRIWTLQQPKCLGQGNIQIGGGGSYSNSSSSPCPVLAEFDPSGLVF--AVCAQVQDRHLLKLYDARKFSEGAFENFGISENELRQTLLAQQPTIDPEVARKLVQAPWIDMSFSADGKNLLVSTKGGMTLVIDTYDLQVTRFLTGYKNEKGLNITACYTSDVNHILTGSEEGEVCVFDATEE--RVMDGVVCRLSGHTGPVRQVKCNPVYEQVASACNHVVLWITP 370
            + +H  GEYLVTA++D ++H+ NA +      L+ KKYGV+L RFTHH  +V+  S+              H +RYLSL+DN+YLR+F GH A+VT+L +S  DD F+S S DG+VR+W ++ P C G           +     S  P +A FDP G++F  A+    Q +H +KLYD R F +G F  F     EL   + A   T             +  ++FS DG  +L+ST G   +V+D+ + +   FL G  NE GL + A Y+ D  +I++GSE G V ++ ++ E   ++   +    GH   V  V  +P    +AS C  + LW+ P
Sbjct:    1 MSFHSSGEYLVTASDDESIHVYNASDASQSTTLYSKKYGVDLIRFTHHTNTVVHGSK----------NEWDHTLRYLSLHDNRYLRYFKGHRAQVTSLEISPADDTFLSGSQDGSVRLWDVRLPACQG-----------FLRLRPSATPAVA-FDPEGIIFGVAIADASQGQHAVKLYDVRSFDKGPFATF-----ELNLGVAASHLT-------------FASLTFSPDGSAILLSTSGEPLVVLDSMEGEPQAFLRGRLNESGLPLVASYSPDGRYIVSGSENGAVHLWSSSPEPNSLVAPEIATFRGHPEAVTNVAWSPTSALIASGCTSLGLWVPP 300          
BLAST of NO07G03100 vs. NCBI_GenBank
Match: XP_024268475.1 (WD repeat-containing protein 82-like isoform X1 [Oncorhynchus tshawytscha])

HSP 1 Score: 210.7 bits (535), Expect = 7.900e-51
Identity = 119/341 (34.90%), Postives = 181/341 (53.08%), Query Frame = 0
Query:   31 VTCLDYHREGEYLVTAAEDGTVHLINALEGKARKKLFCKKYGVELARFTHHAQSVLCSSRPSASQTASALGTTAHDIRYLSLYDNQYLRFFSGHEARVTALAMSYTDDRFMSASVDGTVRIWTLQQPKCLGQGNIQIGGGGSYSNSSSSPCPVLAEFDPSGLVFAVCAQVQDRHLLKLYDARKFSEGAFENFGISENELRQTLLAQQPTIDPEVARKLVQAPWIDMSFSADGKNLLVSTKGGMTLVIDTYDLQVTRFLTGYKNEKGLNITACYTSDVNHILTGSEEGEVCVFDATEE----RVMDGVVCRLSGHTGPVRQVKCNPVYEQVASACNHVVLWI 368
            V C+DY   GE  +++++D ++ L +  EGK  + L+ KKYGV+L R+TH   + +  S      T          IRYLSL DN+Y+R+F GH  RV AL+MS  DD F+S+S+D T+R+W L+ P C G            +N    P   +  +DP GL+FA      D   +KLYD R F +G F +F        +TL ++                W  + FS DGK +L+ST GG   ++D ++  V    +GY N KG+++ AC+T D + ++ GSE+G V V+ +TE      V+DG       H+GP+  ++ NP Y   ASAC+++  W+
Sbjct:   24 VNCVDYSSNGESAISSSDDDSIVLYDCQEGKPIRTLYSKKYGVDLIRYTHGDANTVVYSSNKLDDT----------IRYLSLTDNKYIRYFPGHTDRVVALSMSPVDDTFISSSLDMTIRLWDLRSPNCQG-----------LTNPLGKP---VCSYDPEGLIFAAGV---DSEAIKLYDLRSFDKGPFASF--------ETLFSR-------------VCEWTGLKFSRDGKQILISTNGGAIRILDAFNGSVLHTFSGYNNSKGISLEACFTPDSDFVMIGSEDGRVHVW-STESGMKIAVLDG------KHSGPINTLQFNPKYMTFASACSNMAFWL 309          
The following BLAST results are available for this feature:
BLAST of NO07G03100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27047.12.200e-16277.53wd repeat-containing protein 82 [Nannochloropsis g... [more]
CBJ30954.11.500e-6236.83conserved unknown protein [Ectocarpus siliculosus][more]
XP_007888475.11.900e-5235.28PREDICTED: WD repeat-containing protein 82 [Callor... [more]
XP_020366429.13.200e-5235.28WD repeat-containing protein 82 [Rhincodon typus][more]
XP_022602468.12.100e-5136.36WD repeat-containing protein 82-like [Seriola dume... [more]
XP_023269974.12.100e-5136.36WD repeat-containing protein 82-like [Seriola lala... [more]
XP_018536926.12.700e-5135.00PREDICTED: WD repeat-containing protein 82-like is... [more]
XP_013987398.13.500e-5134.90PREDICTED: WD repeat-containing protein 82-like is... [more]
XP_013762977.17.900e-5135.29WD repeat-containing protein 82 [Thecamonas trahen... [more]
XP_024268475.17.900e-5134.90WD repeat-containing protein 82-like isoform X1 [O... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL100nonsL100Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR072ncniR072Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000549NSK000549Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G03100.1NO07G03100.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|581030gene_2642Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100056g40gene3485Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G03100.1NO07G03100.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G03100 ID=NO07G03100|Name=NO07G03100|organism=Nannochloropsis oceanica|type=gene|length=1122bp
ATGACGTGCGGAAGTAGCGGGATGAGTGGCCTGGAAGCCGTCCGGGTGCA
GGAGCTGCAACGTGGCTGCGTGGTTTCGGGGACGGCTCCAGTCACTTGCT
TGGATTATCATCGGGAAGGTGAGTATTTAGTGACCGCGGCGGAGGACGGA
ACCGTGCACCTGATAAATGCCTTGGAGGGCAAAGCGCGGAAGAAACTATT
TTGCAAGAAGTATGGGGTGGAGCTGGCCAGGTTCACGCATCATGCCCAGA
GTGTTTTGTGCAGTAGCCGGCCCTCGGCAAGCCAGACAGCATCCGCCTTG
GGAACGACGGCGCATGACATTCGTTATCTGTCCCTGTACGACAACCAGTA
CTTGCGTTTTTTTTCGGGCCATGAAGCGCGAGTGACAGCGTTGGCCATGT
CTTACACAGACGATCGATTTATGAGCGCATCGGTTGATGGTACCGTTCGG
ATATGGACATTGCAGCAACCCAAGTGCTTGGGCCAGGGCAACATTCAGAT
AGGTGGTGGGGGAAGCTACAGCAACAGCAGCAGTAGTCCTTGTCCTGTTT
TAGCGGAGTTTGACCCGTCGGGGTTGGTTTTTGCAGTGTGCGCGCAGGTG
CAAGACAGACATTTGTTGAAATTGTATGACGCGAGGAAGTTCAGTGAAGG
GGCTTTTGAAAATTTCGGGATCTCTGAGAATGAGTTACGACAGACGTTGC
TTGCACAACAACCAACGATTGACCCTGAGGTGGCTCGTAAGTTGGTACAG
GCTCCGTGGATTGACATGAGCTTTAGCGCGGACGGGAAGAATTTACTGGT
GTCGACCAAGGGAGGGATGACGCTTGTGATTGACACTTACGATTTGCAAG
TGACGAGGTTTCTGACCGGCTATAAGAATGAGAAGGGATTGAATATCACA
GCTTGTTATACCTCGGATGTGAACCACATTTTGACGGGCTCGGAGGAGGG
GGAGGTATGTGTGTTTGATGCGACGGAGGAGAGGGTAATGGACGGGGTGG
TGTGTCGATTGAGTGGGCATACAGGCCCTGTGAGGCAGGTGAAGTGTAAC
CCGGTCTACGAGCAGGTGGCGAGTGCGTGTAACCATGTGGTGTTGTGGAT
AACGCCCCCACGAGGGAAATAA
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protein sequence of NO07G03100.1

>NO07G03100.1-protein ID=NO07G03100.1-protein|Name=NO07G03100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=374bp
MTCGSSGMSGLEAVRVQELQRGCVVSGTAPVTCLDYHREGEYLVTAAEDG
TVHLINALEGKARKKLFCKKYGVELARFTHHAQSVLCSSRPSASQTASAL
GTTAHDIRYLSLYDNQYLRFFSGHEARVTALAMSYTDDRFMSASVDGTVR
IWTLQQPKCLGQGNIQIGGGGSYSNSSSSPCPVLAEFDPSGLVFAVCAQV
QDRHLLKLYDARKFSEGAFENFGISENELRQTLLAQQPTIDPEVARKLVQ
APWIDMSFSADGKNLLVSTKGGMTLVIDTYDLQVTRFLTGYKNEKGLNIT
ACYTSDVNHILTGSEEGEVCVFDATEERVMDGVVCRLSGHTGPVRQVKCN
PVYEQVASACNHVVLWITPPRGK*
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Synonyms
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