NO07G03060, NO07G03060 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO07G03060
Unique Name	NO07G03060
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4742
Alignment location	chr7:853746..858487 -

Link to JBrowse

Properties


Property Name	Value
Description	Tpr repeat-containing thioredoxin ttl1

Mutants

Expression

Analysis:

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr7	genome	chr7:853746..858487 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036869	J_dom_sf
IPR011990	TPR-like_helical_dom
IPR013026	TPR-contain_dom
IPR019734	TPR_repeat
IPR001623	DnaJ_domain

Homology

[Close]

BLAST of NO07G03060 vs. NCBI_GenBank
Match: XP_006638278.1 (PREDICTED: dnaJ homolog subfamily C member 7 isoform X2 [Lepisosteus oculatus])

HSP 1 Score: 119.8 bits (299), Expect = 7.600e-23
Identity = 111/431 (25.75%), Postives = 182/431 (42.23%), Query Frame = 0

Query:  815 PAADQQRELQQAAQTFREKASSLYLGKNYEKSLHEFTNALLLAPDGWPEKPKLYCNRAAALIMLHRYEDAVKDCEKAIQGDPHLLKAYTRCGRAYLHMGVLDRAYVCFDEVRSRAEQRLVAKFGPDAPXXXXXXXXXXXXXXXXXXXXXXXXXXRAEAYEKKGLDEAIQEAKEGRAEVSMVEQALQAAELHSKKVEWGEALERVDAALRFAHRAKNAMRLKLLALCKLKRWEGGVRFCEKYYAPSKAELFPTSPSTTSSTGISSSSPSPFLHPNPHAPIHVIVRMGSLE-QRSYIR--CLRYTDREDDAVAALKTLLARHGHVMWVEKEIVRIKSIRNAKEAGDAAFRKQNFDLALGHYAEALKLDPEWDMMNAVLHCNRGAAHMALRLFEQAKDDCTHALRRKPDYWKAFLRRARAWREMKRWEESVADY 1243
            P    + EL + A+ F+E+ ++ Y+ K+Y ++ + +T A+    D  P+    Y NRAA L+ML R+ +A++D ++A++ D   +K + R G+ +L +G    A  CF +         V +  PD                                       +A QE K   A    V +  + AE   +K ++ + +  +D AL +A        LK   L  L R                   +P + S  S                       I+R+ S      Y+R  CL Y D  D AV      L                K+++  KE G+ AF+  N+++A   Y+EAL++DP     NA L+CNRG     L   EQ+ +DCT+A++    Y KA+LRRA+ + + +++EE+V DY
Sbjct:   14 PQIMNEEELAREAECFKEQGNAFYIKKDYTEAFNYYTKAI----DACPKNASYYGNRAATLMMLSRFREALEDAQQAVRLDDSFVKGHLREGKCHLSLGNAMAARRCFQK---------VLELEPDN-------------------------------------SQAQQELKNADA----VLEYEKMAEFDFEKRDFRKVVFCMDRALEYAPVCHRFKILKAECLALLGR-------------------YPEAQSVASD----------------------ILRLDSTNGDALYVRGLCLYYEDCIDKAVQFFVQALRMAPDHEKARLACRNAKALKAKKEEGNKAFKDGNYEVAYELYSEALQIDPNNIKTNAKLYCNRGTVGSKLNKIEQSIEDCTNAIKLDETYIKAYLRRAQCYMDTEQYEEAVRDY 349

[Close]

BLAST of NO07G03060 vs. NCBI_GenBank
Match: EWM27029.1 (hypothetical protein Naga_100056g43, partial [Nannochloropsis gaditana])

HSP 1 Score: 119.8 bits (299), Expect = 7.600e-23
Identity = 56/70 (80.00%), Postives = 63/70 (90.00%), Query Frame = 0

Query:   39 DTSYVDGILEGLNGLEFNSLGPLQEDWLPHIASILEQLHIKSRDRDPEAPDIGGVAEYLRRLDIRKRRAS 109
            D SYVD ILEG++GL   SLGPLQ DWLP IA+ILEQ+H+KS++RDPEAPDIGGVAEYLRRLDIRKRRAS
Sbjct:  146 DGSYVDEILEGVSGLGLGSLGPLQGDWLPQIAAILEQVHLKSKERDPEAPDIGGVAEYLRRLDIRKRRAS 215

[Close]

BLAST of NO07G03060 vs. NCBI_GenBank
Match: XP_015217706.1 (PREDICTED: dnaJ homolog subfamily C member 7 isoform X1 [Lepisosteus oculatus])

HSP 1 Score: 119.8 bits (299), Expect = 7.600e-23
Identity = 111/431 (25.75%), Postives = 182/431 (42.23%), Query Frame = 0

Query:  815 PAADQQRELQQAAQTFREKASSLYLGKNYEKSLHEFTNALLLAPDGWPEKPKLYCNRAAALIMLHRYEDAVKDCEKAIQGDPHLLKAYTRCGRAYLHMGVLDRAYVCFDEVRSRAEQRLVAKFGPDAPXXXXXXXXXXXXXXXXXXXXXXXXXXRAEAYEKKGLDEAIQEAKEGRAEVSMVEQALQAAELHSKKVEWGEALERVDAALRFAHRAKNAMRLKLLALCKLKRWEGGVRFCEKYYAPSKAELFPTSPSTTSSTGISSSSPSPFLHPNPHAPIHVIVRMGSLE-QRSYIR--CLRYTDREDDAVAALKTLLARHGHVMWVEKEIVRIKSIRNAKEAGDAAFRKQNFDLALGHYAEALKLDPEWDMMNAVLHCNRGAAHMALRLFEQAKDDCTHALRRKPDYWKAFLRRARAWREMKRWEESVADY 1243
            P    + EL + A+ F+E+ ++ Y+ K+Y ++ + +T A+    D  P+    Y NRAA L+ML R+ +A++D ++A++ D   +K + R G+ +L +G    A  CF +         V +  PD                                       +A QE K   A    V +  + AE   +K ++ + +  +D AL +A        LK   L  L R                   +P + S  S                       I+R+ S      Y+R  CL Y D  D AV      L                K+++  KE G+ AF+  N+++A   Y+EAL++DP     NA L+CNRG     L   EQ+ +DCT+A++    Y KA+LRRA+ + + +++EE+V DY
Sbjct:   14 PQIMNEEELAREAECFKEQGNAFYIKKDYTEAFNYYTKAI----DACPKNASYYGNRAATLMMLSRFREALEDAQQAVRLDDSFVKGHLREGKCHLSLGNAMAARRCFQK---------VLELEPDN-------------------------------------SQAQQELKNADA----VLEYEKMAEFDFEKRDFRKVVFCMDRALEYAPVCHRFKILKAECLALLGR-------------------YPEAQSVASD----------------------ILRLDSTNGDALYVRGLCLYYEDCIDKAVQFFVQALRMAPDHEKARLACRNAKALKAKKEEGNKAFKDGNYEVAYELYSEALQIDPNNIKTNAKLYCNRGTVGSKLNKIEQSIEDCTNAIKLDETYIKAYLRRAQCYMDTEQYEEAVRDY 349

[Close]

BLAST of NO07G03060 vs. NCBI_GenBank
Match: XP_004552356.2 (dnaJ homolog subfamily C member 7 [Maylandia zebra] >XP_005726148.2 PREDICTED: dnaJ homolog subfamily C member 7 [Pundamilia nyererei])

HSP 1 Score: 119.4 bits (298), Expect = 9.900e-23
Identity = 110/424 (25.94%), Postives = 177/424 (41.75%), Query Frame = 0

Query:  822 ELQQAAQTFREKASSLYLGKNYEKSLHEFTNALLLAPDGWPEKPKLYCNRAAALIMLHRYEDAVKDCEKAIQGDPHLLKAYTRCGRAYLHMGVLDRAYVCFDEVRSRAEQRLVAKFGPDAPXXXXXXXXXXXXXXXXXXXXXXXXXXRAEAYEKKGLDEAIQEAKEGRAEVSMVEQALQAAELHSKKVEWGEALERVDAALRFAHRAKNAMRLKLLALCKLKRWEGGVRFCEKYYAPSKAELFPTSPSTTSSTGISSSSPSPFLHPNPHAPIHVIVRMGSLEQRS-YIR--CLRYTDREDDAVAALKTLLARHGHVMWVEKEIVRIKSIRNAKEAGDAAFRKQNFDLALGHYAEALKLDPEWDMMNAVLHCNRGAAHMALRLFEQAKDDCTHALRRKPDYWKAFLRRARAWREMKRWEESVADY 1243
            EL++ A++F+E+ ++ Y+ K+Y ++ + +T A+    D  P+    Y NRAA L+ML RY DA++DC++A++ D   +K + R G+ +L +G    A  CF  V                                                      +A QE K   +    + +  + AE+  +K ++   +  +D AL  A        LK   L  L R                   +P + S  S                       I+RM S    + Y+R  CL Y D  D AV      L                K+++  KE G+ AF++ N++ A   Y+EAL +DP     NA L+CNR      L+  EQA +DCT A++    Y KA+LRRA+ + + +++EE+V DY
Sbjct:   22 ELEREAESFKEQGNAFYVKKDYAEAFNYYTKAI----DMCPKNASYYGNRAATLMMLCRYRDALEDCQQAVRLDNTFIKGHLREGKCHLLLGNAMAASRCFQRVLELESDN----------------------------------------------SQAQQEVKNAES----ILEYERMAEIGFEKRDFRMVVFCMDRALDSASACHKFKILKAECLALLGR-------------------YPEAQSVASD----------------------ILRMDSTNADALYVRGLCLYYEDCIDKAVQFFVQALRMAPDHDKARLACRNAKALKAKKEEGNKAFKEGNYEAACELYSEALTIDPNNIKTNAKLYCNRATVGSKLKKLEQAIEDCTKAIKLDETYIKAYLRRAQCYMDTEQYEEAVRDY 350

[Close]

BLAST of NO07G03060 vs. NCBI_GenBank
Match: XP_005920423.2 (PREDICTED: dnaJ homolog subfamily C member 7 [Haplochromis burtoni])

HSP 1 Score: 119.4 bits (298), Expect = 9.900e-23
Identity = 110/424 (25.94%), Postives = 177/424 (41.75%), Query Frame = 0

Query:  822 ELQQAAQTFREKASSLYLGKNYEKSLHEFTNALLLAPDGWPEKPKLYCNRAAALIMLHRYEDAVKDCEKAIQGDPHLLKAYTRCGRAYLHMGVLDRAYVCFDEVRSRAEQRLVAKFGPDAPXXXXXXXXXXXXXXXXXXXXXXXXXXRAEAYEKKGLDEAIQEAKEGRAEVSMVEQALQAAELHSKKVEWGEALERVDAALRFAHRAKNAMRLKLLALCKLKRWEGGVRFCEKYYAPSKAELFPTSPSTTSSTGISSSSPSPFLHPNPHAPIHVIVRMGSLEQRS-YIR--CLRYTDREDDAVAALKTLLARHGHVMWVEKEIVRIKSIRNAKEAGDAAFRKQNFDLALGHYAEALKLDPEWDMMNAVLHCNRGAAHMALRLFEQAKDDCTHALRRKPDYWKAFLRRARAWREMKRWEESVADY 1243
            EL++ A++F+E+ ++ Y+ K+Y ++ + +T A+    D  P+    Y NRAA L+ML RY DA++DC++A++ D   +K + R G+ +L +G    A  CF  V                                                      +A QE K   +    + +  + AE+  +K ++   +  +D AL  A        LK   L  L R                   +P + S  S                       I+RM S    + Y+R  CL Y D  D AV      L                K+++  KE G+ AF++ N++ A   Y+EAL +DP     NA L+CNR      L+  EQA +DCT A++    Y KA+LRRA+ + + +++EE+V DY
Sbjct:   22 ELEREAESFKEQGNAFYVKKDYAEAFNYYTKAI----DMCPKNASYYGNRAATLMMLCRYRDALEDCQQAVRLDNTFIKGHLREGKCHLLLGNAMAASRCFQRVLELESDN----------------------------------------------SQAQQEVKNAES----ILEYERMAEIGFEKRDFRMVVFCMDRALDSASACHKFKILKAECLALLGR-------------------YPEAQSVASD----------------------ILRMDSTNADALYVRGLCLYYEDCIDKAVQFFVQALRMAPDHDKARLACRNAKALKAKKEEGNKAFKEGNYEAACELYSEALTIDPNNIKTNAKLYCNRATVGSKLKKLEQAIEDCTKAIKLDETYIKAYLRRAQCYMDTEQYEEAVRDY 350

[Close]

BLAST of NO07G03060 vs. NCBI_GenBank
Match: XP_019405948.1 (PREDICTED: dnaJ homolog subfamily C member 7 isoform X1 [Crocodylus porosus])

HSP 1 Score: 119.4 bits (298), Expect = 9.900e-23
Identity = 113/436 (25.92%), Postives = 185/436 (42.43%), Query Frame = 0

Query:  814 PPAADQQRELQQAAQTFREKASSLYLGKNYEKSLHEFTNALLLAPDGWPEKPKLYCNRAAALIMLHRYEDAVKDCEKAIQGDPHLLKAYTRCGRAYLHMGVLDRAYVCFDEVRSRAEQRLVAKFGPDAPXXXXXXXXXXXXXXXXXXXXXXXXXXRAEAYEKKGLDEAIQEAKEGRAEVSMVEQALQAAELHSKKVEWGEALERVDAALRFAHRAKNAMRLKLLALCKLKRWEGGVRFCEKYYAPSKAELFPTSPSTTSSTGISSSSPSPFLHPNPHAPIHVIVRMGSLEQRS-YIR--CLRYTDREDDAVA-ALKTLLARHGHVMWVEKEIV---RIKSIRNAKEAGDAAFRKQNFDLALGHYAEALKLDPEWDMMNAVLHCNRGAAHMALRLFEQAKDDCTHALRRKPDYWKAFLRRARAWREMKRWEESVADY 1243
            P   D   E ++ A++F+E+ +  Y  K+Y ++ + +T A+    D  P     Y NRAA L+ML R+ +A+ D +++++ D   ++ + R G+ +L +G    A  CF  V                                                    LD    +A++     S V +  + AE+  +K ++ +A+  +D AL FA        LK   L  L R                   +P + S  S                       I+RM S    + Y+R  CL Y D  + AV   ++ L     H    EK  +     K+++  KE G+ AF++ N+ LA   Y EAL +DP     NA L+CNRG  +  LR  E+A DDCT+A++    Y KA+LRRA+ + + +++E++V DY
Sbjct:   17 PGGLDSDEEARREAESFKEQGNVYYAKKDYNEAYNYYTKAI----DTCPHNASYYGNRAATLMMLGRFREALGDSQQSVRLDDCFVRGHLREGKCHLSLGNAMAASRCFQRVLE--------------------------------------------------LDHKNTQAQQELKNASAVLEYEKIAEIDFEKRDFRKAVFCMDRALEFAPACHRFKILKAECLALLGR-------------------YPEAQSVASD----------------------ILRMDSTNADALYVRGLCLYYEDCIEKAVQFFIQALRMAPDH----EKACMACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKLYCNRGTVNSKLRKLEEAIDDCTNAIKLDDTYIKAYLRRAQCYMDTEQYEDAVRDY 353

[Close]

BLAST of NO07G03060 vs. NCBI_GenBank
Match: XP_019938774.1 (PREDICTED: dnaJ homolog subfamily C member 7-like isoform X4 [Paralichthys olivaceus])

HSP 1 Score: 119.4 bits (298), Expect = 9.900e-23
Identity = 110/431 (25.52%), Postives = 178/431 (41.30%), Query Frame = 0

Query:  815 PAADQQRELQQAAQTFREKASSLYLGKNYEKSLHEFTNALLLAPDGWPEKPKLYCNRAAALIMLHRYEDAVKDCEKAIQGDPHLLKAYTRCGRAYLHMGVLDRAYVCFDEVRSRAEQRLVAKFGPDAPXXXXXXXXXXXXXXXXXXXXXXXXXXRAEAYEKKGLDEAIQEAKEGRAEVSMVEQALQAAELHSKKVEWGEALERVDAALRFAHRAKNAMRLKLLALCKLKRWEGGVRFCEKYYAPSKAELFPTSPSTTSSTGISSSSPSPFLHPNPHAPIHVIVRMGSLEQRS-YIR--CLRYTDREDDAVAALKTLLARHGHVMWVEKEIVRIKSIRNAKEAGDAAFRKQNFDLALGHYAEALKLDPEWDMMNAVLHCNRGAAHMALRLFEQAKDDCTHALRRKPDYWKAFLRRARAWREMKRWEESVADY 1243
            P    Q EL++ A+ F+E+ ++LY  K+Y ++ + +T A+    D  P+    Y NRAA L+ML R+ +A++D ++A++ D   +K + R G+ +L +G    A  CF +V                                                    L+ + +EA++ +     + +  + AE    K ++ + +  +D AL  A        LK   L  L R                   +P + S  S                       I+RM S    + Y+R  CL Y D  D AV      L                K+++  K+ G+ AF+  N+D A   Y EAL +DP     NA L+CNR  A   L+   QA DDCT A++    Y KA+LRRA+ + + +++EE+V DY
Sbjct:   14 PQIRNQDELEREAEGFKEQGNALYSKKDYSEAFNYYTKAI----DTCPKNASYYGNRAATLMMLSRFREALEDSQQAVRLDDCFMKGHLREGKCHLSLGNAMAASRCFQKVLE--------------------------------------------------LEPSNREAQQEKKNSGTLLEYERMAEFGFDKRDFRKVVYCMDRALALASACHRFKILKAECLALLGR-------------------YPEAQSVASD----------------------ILRMDSTNADALYVRGLCLYYEDCIDKAVQFFVQALRMAPDHEKARLACRNAKALKAKKDEGNQAFKNCNYDAAYQLYTEALTIDPNNIKTNAKLYCNRATAGAKLKKLNQAIDDCTSAIKLDDTYIKAYLRRAQCYMDTEQYEEAVRDY 349

[Close]

BLAST of NO07G03060 vs. NCBI_GenBank
Match: XP_003441887.1 (PREDICTED: dnaJ homolog subfamily C member 7 [Oreochromis niloticus])

HSP 1 Score: 119.0 bits (297), Expect = 1.300e-22
Identity = 106/431 (24.59%), Postives = 182/431 (42.23%), Query Frame = 0

Query:  815 PAADQQRELQQAAQTFREKASSLYLGKNYEKSLHEFTNALLLAPDGWPEKPKLYCNRAAALIMLHRYEDAVKDCEKAIQGDPHLLKAYTRCGRAYLHMGVLDRAYVCFDEVRSRAEQRLVAKFGPDAPXXXXXXXXXXXXXXXXXXXXXXXXXXRAEAYEKKGLDEAIQEAKEGRAEVSMVEQALQAAELHSKKVEWGEALERVDAALRFAHRAKNAMRLKLLALCKLKRWEGGVRFCEKYYAPSKAELFPTSPSTTSSTGISSSSPSPFLHPNPHAPIHVIVRMGSLEQRS-YIR--CLRYTDREDDAVAALKTLLARHGHVMWVEKEIVRIKSIRNAKEAGDAAFRKQNFDLALGHYAEALKLDPEWDMMNAVLHCNRGAAHMALRLFEQAKDDCTHALRRKPDYWKAFLRRARAWREMKRWEESVADY 1243
            P    Q +L++ A++F+E+ ++ Y  K+Y ++ + +T A+    D  P+    Y NRAA L+ML R+ +A++D ++A++ D   +K + R G+ +L +G    A  CF +V                                                    L+ + +EA++ +   + + +  + A+   +K ++ + +  +D AL  A        LK   L  L R                   +P + S  S                       I+RM S    + Y+R  CL Y D  D AV      L                K+++  KE G+ AF+  N++ A   Y EAL +DP     NA L+CNR  A   L+  +QA +DCT+A++    Y KA+LRRA+ + + +++EE+V DY
Sbjct:   14 PQICNQEDLERLAESFKEQGNAYYSKKDYSQAFNYYTKAI----DACPKNASYYGNRAATLMMLCRFREALEDSQQAVRLDDCFMKGHLREGKCHLSLGNAMAANRCFQKVLE--------------------------------------------------LEPSNREAQQEKKNAAALLEYQRMADFGFEKRDFRKVVFCMDRALALASACHRFKILKAECLALLGR-------------------YPEAQSVASD----------------------ILRMDSTNADALYVRGLCLYYEDCIDKAVQFFVQALRMAPDHEKARLACRNAKALKAKKEEGNQAFKNNNYEAAYQLYTEALAIDPNNIKTNAKLYCNRATAGAKLKKVDQAIEDCTNAIKLDDTYIKAYLRRAQCYMDTEQYEEAVRDY 349

[Close]

BLAST of NO07G03060 vs. NCBI_GenBank
Match: XP_006006436.1 (PREDICTED: dnaJ homolog subfamily C member 7 isoform X1 [Latimeria chalumnae])

HSP 1 Score: 119.0 bits (297), Expect = 1.300e-22
Identity = 112/424 (26.42%), Postives = 180/424 (42.45%), Query Frame = 0

Query:  822 ELQQAAQTFREKASSLYLGKNYEKSLHEFTNALLLAPDGWPEKPKLYCNRAAALIMLHRYEDAVKDCEKAIQGDPHLLKAYTRCGRAYLHMGVLDRAYVCFDEVRSRAEQRLVAKFGPDAPXXXXXXXXXXXXXXXXXXXXXXXXXXRAEAYEKKGLDEAIQEAKEGRAEVSMVEQALQAAELHSKKVEWGEALERVDAALRFAHRAKNAMRLKLLALCKLKRWEGGVRFCEKYYAPSKAELFPTSPSTTSSTGISSSSPSPFLHPNPHAPIHVIVRMGSLEQRS-YIR--CLRYTDREDDAVAALKTLLARHGHVMWVEKEIVRIKSIRNAKEAGDAAFRKQNFDLALGHYAEALKLDPEWDMMNAVLHCNRGAAHMALRLFEQAKDDCTHALRRKPDYWKAFLRRARAWREMKRWEESVADY 1243
            +L++ A++F+E+ ++ Y  K+Y ++ + +T A+    D  P     Y NRAA  +ML R+ +A++D ++A++ D   +K + R G+ +L +G    A  CF +         V +  PD                                       +A QE K   A    V +  + AEL  +K ++ +A+  +D AL FA        LK   L  L R                   +P + S  S                       I+RM S    + Y+R  CL Y D  D AV      L                K+++  KE G+ AF++ N+D A   Y EAL +DP     NA L+CNRG     L+  +QA +DCT A++    Y KA+LRRA+ + + +++E++V DY
Sbjct:   21 DLEREAESFKEQGNAYYAKKDYNEAYNYYTKAI----DACPINASYYGNRAATQMMLGRFREALEDAQQAVRLDDLFVKGHLREGKCHLSLGNAMAAGRCFQK---------VLELEPDN-------------------------------------TQAQQELKNANA----VLEYERVAELDFEKRDFRKAVFCMDRALEFATACHRFKILKAECLALLGR-------------------YPEAQSVASD----------------------ILRMDSTNADALYVRGLCLYYEDCIDKAVQFFVQALRMAPDHKKARLACRNAKALKAKKEEGNTAFKEGNYDQAYELYTEALGIDPNNIKTNAKLYCNRGTVGSKLKKLDQAIEDCTSAVKLDETYIKAYLRRAQCYMDTEQYEDAVRDY 349

[Close]

BLAST of NO07G03060 vs. NCBI_GenBank
Match: KYO46679.1 (dnaJ-like protein subfamily C member 7 [Alligator mississippiensis])

HSP 1 Score: 118.6 bits (296), Expect = 1.700e-22
Identity = 113/436 (25.92%), Postives = 185/436 (42.43%), Query Frame = 0

Query:  814 PPAADQQRELQQAAQTFREKASSLYLGKNYEKSLHEFTNALLLAPDGWPEKPKLYCNRAAALIMLHRYEDAVKDCEKAIQGDPHLLKAYTRCGRAYLHMGVLDRAYVCFDEVRSRAEQRLVAKFGPDAPXXXXXXXXXXXXXXXXXXXXXXXXXXRAEAYEKKGLDEAIQEAKEGRAEVSMVEQALQAAELHSKKVEWGEALERVDAALRFAHRAKNAMRLKLLALCKLKRWEGGVRFCEKYYAPSKAELFPTSPSTTSSTGISSSSPSPFLHPNPHAPIHVIVRMGSLEQRS-YIR--CLRYTDREDDAVA-ALKTLLARHGHVMWVEKEIV---RIKSIRNAKEAGDAAFRKQNFDLALGHYAEALKLDPEWDMMNAVLHCNRGAAHMALRLFEQAKDDCTHALRRKPDYWKAFLRRARAWREMKRWEESVADY 1243
            P   D   E ++ A++F+E+ +  Y  K+Y ++ + +T A+    D  P     Y NRAA L+ML R+ +A+ D +++++ D   ++ + R G+ +L +G    A  CF  V                                                    LD    +A++     S V +  + AE+  +K ++ +A+  +D AL FA        LK   L  L R                   +P + S  S                       I+RM S    + Y+R  CL Y D  + AV   ++ L     H    EK  +     K+++  KE G+ AF++ N+ LA   Y EAL +DP     NA L+CNRG  +  LR  E+A DDCT+A++    Y KA+LRRA+ + + +++E++V DY
Sbjct:   18 PGGLDSDEEARREAESFKEQGNVYYAKKDYNEAYNYYTKAI----DICPHNASYYGNRAATLMMLGRFREALGDSQQSVRLDDCFVRGHLREGKCHLSLGNAMAASRCFQRVLE--------------------------------------------------LDHKNTQAQQELKNASAVLEYEKIAEIDFEKRDFRKAVFCMDRALEFAPACHRFKILKAECLALLGR-------------------YPEAQSVASD----------------------ILRMDSTNADALYVRGLCLYYEDCIEKAVQFFIQALRMAPDH----EKACMACRNAKALKAKKEDGNKAFKEGNYKLAYELYTEALGIDPNNIKTNAKLYCNRGTVNSKLRKLEEAIDDCTNAIKLDDTYIKAYLRRAQCYMDTEQYEDAVRDY 354

The following BLAST results are available for this feature:

BLAST of NO07G03060 vs. NCBI_GenBank

BLAST of NO07G03060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
XP_006638278.1	7.600e-23	25.75	PREDICTED: dnaJ homolog subfamily C member 7 isofo...	[more]
EWM27029.1	7.600e-23	80.00	hypothetical protein Naga_100056g43, partial [Nann...	[more]
XP_015217706.1	7.600e-23	25.75	PREDICTED: dnaJ homolog subfamily C member 7 isofo...	[more]
XP_004552356.2	9.900e-23	25.94	dnaJ homolog subfamily C member 7 [Maylandia zebra...	[more]
XP_005920423.2	9.900e-23	25.94	PREDICTED: dnaJ homolog subfamily C member 7 [Hapl...	[more]
XP_019405948.1	9.900e-23	25.92	PREDICTED: dnaJ homolog subfamily C member 7 isofo...	[more]
XP_019938774.1	9.900e-23	25.52	PREDICTED: dnaJ homolog subfamily C member 7-like ...	[more]
XP_003441887.1	1.300e-22	24.59	PREDICTED: dnaJ homolog subfamily C member 7 [Oreo...	[more]
XP_006006436.1	1.300e-22	26.42	PREDICTED: dnaJ homolog subfamily C member 7 isofo...	[more]
KYO46679.1	1.700e-22	25.92	dnaJ-like protein subfamily C member 7 [Alligator ...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL100	nonsL100	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR072	ncniR072	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR071	ncniR071	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR130	ngnoR130	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK000552	NSK000552	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO07G03060.1	NO07G03060.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|525078	gene_2638	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100194g1	gene3481	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO07G03060.1	NO07G03060.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO07G03060 ID=NO07G03060|Name=NO07G03060|organism=Nannochloropsis oceanica|type=gene|length=4742bp
ATGGAGGACCCTCCAGAGCCCTCTCCCCCACGGGCATCGCAGCAGCAGCA
GTATGGGCAGTTAGAGCAGGAGCAGCAACAACAGCAACAGCAAACAGGGC
TGGGAGAGGAAGAAGACACGTCGTACGTAGATGGAATCCTTGAGGGGCTC
AATGGATTAGAATTTAACAGTCTGGGTCCATTGCAAGAAGACTGGTTGCC
GCACATTGCGTCGATTCTGGAGCAGCTGCATATAAAGAGTAGGGACCGTG
ATCCCGAGGCACCTGATATTGGGGGGGTGGCTGAGTATCTGAGAAGGTTG
GACATACGCAAGCGAAGGGCGTCGCCTGTCGATGGACACGGAGGGGCTGA
GAGAAGAGGAGGAGGAGGAGGAGGGGGGGGGCACCCGCACGACAGAAGCC
GCAGCAGCAGCAGTCGCAGCAGCAGCAGTATTTTGATGGGCCGGAACAAG
AAACGAgtaggagaagagaacatttgtctgtggattcaaattctacagcc
agcggcaggcctcttgccaagcaccacgagGTAGAGGAGGAGGAAGAGGG
GGAGGAAGAGGAAGGAGTGTTCCAAGACGTAGGGCAATCTCTTTCTTCCT
CTTCCTCCGCCGAGTCATTTACTTTCCCTGACCCTATCCAGCACCAGCTG
GAGCAGCAGCAGCAGCACTCGTTCAGCCCTTCTGGATCCACATTTTCTGC
AGCTTGTGCTGCTGCTGTTGCTTCTGCTGCCCCACCTACCCCTATGGCAT
TCCACTTTTCCACGCCCAGCAAGCCCACATTTGACTTACAACAGGAGGAG
CAGCAGAAGCAACACCAGCAGCAGCAGTTACAGGAGGGAGAGGAGGATGA
GAGACGAAGGCAACACACTCAGGAGGAAGAGGTGGTAGTGGTGGAGGAGG
AGGAGCTTGAGCTTGAGAAGCGGCAAGGGGCAGCAGCACCACAATCACAG
CGGCACCCAACCGATATTGAGATTACGTTTACCTTAGGTGGCGGCGGCCA
TAGCGGCAGTACGAGCAGCACCAGTGGCGCCAGCAGCAGCATGGCCACCA
CGGCCGCGTCGCGTCGTCGACTCCTGGGGAAAAAAGTTCGGGCCAACAAC
AGCAGCAGCGGTAGCAGCAGTAGCAGCATTCCTCCTTCCTCGTGCCCCCC
CCCTCTCGCTGTTGCTGATCCGGGGCCAGCCCATGCTTCCTCCACCTCTA
CCGGCGAAATCGGGTGCGGCGTTTCGAACCCTGATCGAATCGATCTGTCC
ACGTACCTCCAAAGAGAAGGGCCCTCCCCCTCCTCCACAGCCGCAGCAGC
ACCCCCTCCCTTTTCCTCCTCCTCCTCCTCCTCCTTCTCTTCGTCCTCCT
TTTCTTCTTTTTCTACCCCACCTCAACCGTCTCCTACCCATGGTGATGGC
GCCTTCTTCTCTATCGGTACGATTGACCTTGGTCTGTCCCCTTCCAAAAA
TCATCCAAAATCCCATGGCAGCACACATCGTTCCCCCCGCCGAGGAGGGC
ATACACGAAGCAGCAGCAGCGGCGGCGGCGGCGGCCGCAGCGGCCGCCGC
CGCCGCAGCAGTACGGCGCATCCTACTGCGAGTAGGGAGACCAACATGCC
TTTCCTCTTCTCCATGGAGACCAGCGGCAGCGCCACCACCAACACCGTGG
GTAGTGGCCCAGCCCGCCAGCTGTCCTCCCCTCTGAAGGGTCGGGAGGGG
TTTGACCTGTCCTCGTCCTTCAAAGGCCCTCCTCCCTCAGCACCTGCCCC
TTCTCCCTTGTCGGGTGGACCCGGGTGCTCCGGCCGGACCGGAGCTGGAG
GAGCGGTGAAGGAGGAAGGGTGGGAGGGAGGAAGGCAGCAGCAGCAGCAG
CAGCAGCATCAGCAGCTGCAAGGACATCACAAGGTGGCTTCCGAAGTAGG
AGTTGAACAGGATGCTGATTCTTCCTCCTCGTCAGCCTCTGCATATTCCT
CCCAGAGCGGTGCGACCGCTGCGACGGCAGCAGCAACTGCAGCAGCAACT
GCAGCAGCAACTGCAAGGACAGGGATGACATCATCAGCGTCTGTTTCTCC
TGCGTCTCCTGGTTTTATTTTTGGTGGGGGGCGGACGGGAGGAGAAAATG
GAGAGGGAGGGATGGGTGGGAAATCAATGGATGAGAGTGCTGCGAGCAAG
GCCGCTCACCAGCCCCCATTGTCGTCCTCGCCTCTGTCCACTATTTTACC
GTCTAGAATGGAAGTGGAAGACACAGGATTTTCTTTAGGCACCAGCAAGC
CGATTACTCCCACGAAGAGTGGAGGTGGGGGAATGGGAAAGGCTGGAACG
AGGCATCACCACCACCAGCATCATCGCTCGGTTTCTTCACCTTCTACTGG
TGCTAGTGCTGCAGCTGCTGGTGCAGGACGGAGCCCCGCCACGCCTCTCT
TTGGTGGTCTCAGCAGCACCAGCACCAACAGGATTGCCACTGCGTTGAGG
GACGGAGGAATGCCATCCGCGTTCCAGGGATTCATCCCTCCCTCCACCTC
CTTTTCGACCCTCCCCCCCGCCGCGGACCAGCAACGCGAGCTGCAACAAG
CCGCACAGACATTCAGAGAAAAAGCCTCGTCCCTCTACCTCGGCAAAAAT
TACGAAAAATCGCTCCACGAGTTTACCAACGCCCTTCTCCTCGCCCCTGA
CGGGTGGCCGGAAAAACCGAAACTGTACTGTAACCGTGCTGCAGCGCTGA
TCATGCTCCATCGGTATGAAGACGCGGTCAAAGACTGCGAAAAAGCCATA
CAAGGAGACCCACACCTCCTCAAGGCCTACACTCGGTGTGGCCGGGCGTA
CCTCCATATGGGCGTCCTTGACCGTGCCTATGTCTGTTTTGATGAAGTTC
GCTCCCGAGCTGAGCAGCGCTTGGTGGCCAAATTCGGCCCTGATGCTCCT
CCCATCCCTCCTGTGGTGATGACGACTCCTGGCGGTAGCAGCAGCAGCAG
TAGTAGGAGAGAGGGGGCCTACCAGCAGAGAGCGGAGGCCTACGAGAAGA
AAGGTTTGGACGAAGCAATCCAGGAAGCGAAAGAGGGACGGGCGGAGGTG
TCAATGGTGGAGCAGGCGCTACAAGCAGCAGAATTGCATAGCAAAAAAGT
GGAGTGGGGGGAAGCATTGGAGAGGGTAGATGCTGCTTTGCGCTTCGCCC
ATCGTGCCAAGAACGCCATGAGACTCAAGCTCCTCGCCCTGTGCAAACTC
AAGCGATGGGAAGGCGGGGTCCGCTTCTGTGAGAAATACTATGCCCCTAG
CAAAGCCGAGCTGTTCCCCACCTCTCCCTCCACCACTTCCTCCACCGGCA
TCTCGTCCTCATCCCCATCTCCTTTCCTCCACCCCAACCCGCACGCTCCC
ATCCACGTCATCGTCCGGATGGGCTCCCTGGAGCAACGATCCTACATCCG
CTGCTTGCGCTACACGGACCGGGAGGACGACGCCGTCGCTGCCCTCAAAA
CCCTCCTGGCCCGGCACGGGCACGTCATGTGGGTCGAGAAAGAAATTGTC
CGAATTAAATCTATCAGGAACGCAAAAGAGGCCGGTGACGCGGCGTTTCG
CAAGCAAAATTTTGACCTGGCGCTCGGCCACTACGCCGAAGCCTTAAAAC
TGGATCCGGAATGGGATATGATGAATGCAGTGCTACACTGCAATCGAGGG
GCTGCCCATATGGCCCTCAGGCTATTCGAACAGGCCAAGGATGATTGCAC
GCATGCCTTGAGACGGAAACCTGATTATTGGAAGGCTTTCTTAAGGAGGG
CAAGGGCATGGAGGGAGATGAAGAGGTGGGAGGAGTCGGTGGCAGATTAC
ACGACATATCTGAAGCATGCCTTGCCCAAGGGCACGGCCGGGGAAGGGGA
GGAAGGAAAGGAGGGGGGAGGCGCGGGGGGGCCAACGGGGGCGACTGGGT
CTGCGGCGGATGTGAGGAGTGAGATGGAGGGTGTGCAGAGGGAGATGAAG
CTGGAGAAGTTGGAGAAGGAACGTAGGGAGTTTGCCAAGAAGCGGCAGCA
GCAGCAGCGGCAACGGCAGCAGTCGTCGTTTGGGTGGCGTGGTGGGAGGG
GAGGGGGAGGCCCCTATCGTGGGTGGGGCCGTGGCCGTGGGAGTATCTTT
GGGGAAGGGGAGAGTGACAAAGAGGATGAAGACGATGACGATGACGATGA
CGATGAGGAGGAGGATGGGGCGGGGATTTTCCAGGACTTTTTTGAGTTTT
ATCGAAAGCACAATAACAGAGAATCGGAGCGAGGAGCACGTGGAGGAGCG
TCTTTTGCGTCCAATTCAGACAGACGCACCCCTGGTGCCGCTCCTCCTGG
TGCCGGCCGATCTTCCTCATCCTCCTCCTCCCGCTCTGGATTCGAAGGGA
GCTATCGACGCGGATTCAATTTTAGTGGTGCTGGTCCGGGTAGTAGCAGC
GGCAATAGCAGCGGTCCAGGTGCACGCTCGTCGAAGTCCTCCACGTCTGG
CTGGAGTCGTAGCCGTTCCTCGTCCTCCGTCCCTCCCTCTGGTTCCTCTT
CTTCATCGTCCTCGGCGGTCGTCACGCATTATTCGGTCCTCGGGATTGCG
CGGGCATCCAGCTCGGGGGAAGTAAAGAAGGCTTTTCATCGCTTGGCGTT
GAAGTTCCACCCGGATAAAAACAAGGAGGCGGGGGCGGAGGAGATGTTTA
AGAAGGTATCGGAAGCGTACAACGTGTTGTCAGATCACAGCGCTAGAAGG
TTGTATGACGCCGAGTTAAGGGTAGGAGGGGGTGGGTTTTAG

protein sequence of NO07G03060.1

>NO07G03060.1-protein ID=NO07G03060.1-protein|Name=NO07G03060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1556bp
MEDPPEPSPPRASQQQQYGQLEQEQQQQQQQTGLGEEEDTSYVDGILEGL
NGLEFNSLGPLQEDWLPHIASILEQLHIKSRDRDPEAPDIGGVAEYLRRL
DIRKRRASPVDGHGGAERRGGGGGGGGHPHDRSRSSSSRSSSSILMGRNK
KRVEEEEEGEEEEGVFQDVGQSLSSSSSAESFTFPDPIQHQLEQQQQHSF
SPSGSTFSAACAAAVASAAPPTPMAFHFSTPSKPTFDLQQEEQQKQHQQQ
QLQEGEEDERRRQHTQEEEVVVVEEEELELEKRQGAAAPQSQRHPTDIEI
TFTLGGGGHSGSTSSTSGASSSMATTAASRRRLLGKKVRANNSSSGSSSS
SIPPSSCPPPLAVADPGPAHASSTSTGEIGCGVSNPDRIDLSTYLQREGP
SPSSTAAAAPPPFSSSSSSSFSSSSFSSFSTPPQPSPTHGDGAFFSIGTI
DLGLSPSKNHPKSHGSTHRSPRRGGHTRSSSSGGGGGRSGRRRRSSTAHP
TASRETNMPFLFSMETSGSATTNTVGSGPARQLSSPLKGREGFDLSSSFK
GPPPSAPAPSPLSGGPGCSGRTGAGGAVKEEGWEGGRQQQQQQQHQQLQG
HHKVASEVGVEQDADSSSSSASAYSSQSGATAATAAATAAATAAATARTG
MTSSASVSPASPGFIFGGGRTGGENGEGGMGGKSMDESAASKAAHQPPLS
SSPLSTILPSRMEVEDTGFSLGTSKPITPTKSGGGGMGKAGTRHHHHQHH
RSVSSPSTGASAAAAGAGRSPATPLFGGLSSTSTNRIATALRDGGMPSAF
QGFIPPSTSFSTLPPAADQQRELQQAAQTFREKASSLYLGKNYEKSLHEF
TNALLLAPDGWPEKPKLYCNRAAALIMLHRYEDAVKDCEKAIQGDPHLLK
AYTRCGRAYLHMGVLDRAYVCFDEVRSRAEQRLVAKFGPDAPPIPPVVMT
TPGGSSSSSSRREGAYQQRAEAYEKKGLDEAIQEAKEGRAEVSMVEQALQ
AAELHSKKVEWGEALERVDAALRFAHRAKNAMRLKLLALCKLKRWEGGVR
FCEKYYAPSKAELFPTSPSTTSSTGISSSSPSPFLHPNPHAPIHVIVRMG
SLEQRSYIRCLRYTDREDDAVAALKTLLARHGHVMWVEKEIVRIKSIRNA
KEAGDAAFRKQNFDLALGHYAEALKLDPEWDMMNAVLHCNRGAAHMALRL
FEQAKDDCTHALRRKPDYWKAFLRRARAWREMKRWEESVADYTTYLKHAL
PKGTAGEGEEGKEGGGAGGPTGATGSAADVRSEMEGVQREMKLEKLEKER
REFAKKRQQQQRQRQQSSFGWRGGRGGGGPYRGWGRGRGSIFGEGESDKE
DEDDDDDDDDEEEDGAGIFQDFFEFYRKHNNRESERGARGGASFASNSDR
RTPGAAPPGAGRSSSSSSSRSGFEGSYRRGFNFSGAGPGSSSGNSSGPGA
RSSKSSTSGWSRSRSSSSVPPSGSSSSSSSAVVTHYSVLGIARASSSGEV
KKAFHRLALKFHPDKNKEAGAEEMFKKVSEAYNVLSDHSARRLYDAELRV
GGGGF*

Synonyms

Publications