NO07G03050, NO07G03050 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G03050 vs. NCBI_GenBank
Match: XP_009830968.1 (hypothetical protein H257_07215 [Aphanomyces astaci] >ETV80032.1 hypothetical protein H257_07215 [Aphanomyces astaci]) HSP 1 Score: 82.8 bits (203), Expect = 6.700e-13 Identity = 44/72 (61.11%), Postives = 58/72 (80.56%), Query Frame = 0 Query: 3 SDQLAGAFLLAVAVIVFVYYTLWVIVLPFIDPDVGLHAFFPPRFYAIAIPTVLLVVFVGLVTLFIGLTMLRA 75 SDQ AGA LLAV+V+ +VYY LWVI+ PF+D D + +FFP R+YAIAIP+VLLVVF+ + + FIGL M+R+ Sbjct: 5 SDQRAGAILLAVSVVSYVYYFLWVIISPFVDKDHIVQSFFPERYYAIAIPSVLLVVFLTVCSTFIGLVMIRS 76
BLAST of NO07G03050 vs. NCBI_GenBank
Match: CBN77246.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 80.9 bits (198), Expect = 2.500e-12 Identity = 44/75 (58.67%), Postives = 58/75 (77.33%), Query Frame = 0 Query: 1 MGSDQLAGAFLLAVAVIVFVYYTLWVIVLPFIDPDVGLHAFFPPRFYAIAIPTVLLVVFVGLVTLFIGLTMLRAA 76 + SD+L G+ LL V+V +FVYYTLWVIVLPF+D + FF PR YAIAIPTVL+++ V LV FIGLT++++A Sbjct: 3 VSSDKLVGSGLLLVSVTIFVYYTLWVIVLPFVDTSHPVQDFFLPRKYAIAIPTVLVILLVTLVATFIGLTLMKSA 77
BLAST of NO07G03050 vs. NCBI_GenBank
Match: XP_008619981.1 (dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit [Saprolegnia diclina VS20] >EQC26643.1 dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit [Saprolegnia diclina VS20]) HSP 1 Score: 79.7 bits (195), Expect = 5.700e-12 Identity = 40/72 (55.56%), Postives = 54/72 (75.00%), Query Frame = 0 Query: 3 SDQLAGAFLLAVAVIVFVYYTLWVIVLPFIDPDVGLHAFFPPRFYAIAIPTVLLVVFVGLVTLFIGLTMLRA 75 SDQ GA LLA++V +F YYTLWVI+ PF+D D + FFP R YAIAIP +LLV+F+ + + FIGL M+++ Sbjct: 5 SDQTVGAILLAISVSMFAYYTLWVIITPFVDKDHVVQGFFPDRHYAIAIPAILLVIFLTICSTFIGLVMIKS 76
BLAST of NO07G03050 vs. NCBI_GenBank
Match: XP_012202376.1 (hypothetical protein SPRG_07708 [Saprolegnia parasitica CBS 223.65] >KDO26995.1 hypothetical protein SPRG_07708 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 79.3 bits (194), Expect = 7.400e-12 Identity = 40/72 (55.56%), Postives = 53/72 (73.61%), Query Frame = 0 Query: 3 SDQLAGAFLLAVAVIVFVYYTLWVIVLPFIDPDVGLHAFFPPRFYAIAIPTVLLVVFVGLVTLFIGLTMLRA 75 SDQ GA LLA++V F YYTLWVI+ PF+D D + FFP R YAIAIP +LLV+F+ + + FIGL M+++ Sbjct: 5 SDQTVGAILLAISVSTFAYYTLWVIITPFVDKDHVVQGFFPDRHYAIAIPAILLVIFLTICSTFIGLVMIKS 76
BLAST of NO07G03050 vs. NCBI_GenBank
Match: OQR87730.1 (hypothetical protein ACHHYP_08108 [Achlya hypogyna]) HSP 1 Score: 79.0 bits (193), Expect = 9.700e-12 Identity = 39/72 (54.17%), Postives = 54/72 (75.00%), Query Frame = 0 Query: 3 SDQLAGAFLLAVAVIVFVYYTLWVIVLPFIDPDVGLHAFFPPRFYAIAIPTVLLVVFVGLVTLFIGLTMLRA 75 SDQ GA LLA++V+ F YYTLWVI+ PF+D + +FFP R YAIAIP +LLV+F+ + + FIGL M+++ Sbjct: 5 SDQTVGAILLAISVVAFAYYTLWVIITPFVDKGHVVQSFFPERHYAIAIPAILLVIFLTICSTFIGLVMIKS 76
BLAST of NO07G03050 vs. NCBI_GenBank
Match: XP_008876476.1 (hypothetical protein H310_11540 [Aphanomyces invadans] >ETV94885.1 hypothetical protein H310_11540 [Aphanomyces invadans]) HSP 1 Score: 77.0 bits (188), Expect = 3.700e-11 Identity = 39/72 (54.17%), Postives = 57/72 (79.17%), Query Frame = 0 Query: 3 SDQLAGAFLLAVAVIVFVYYTLWVIVLPFIDPDVGLHAFFPPRFYAIAIPTVLLVVFVGLVTLFIGLTMLRA 75 SDQ +GA LLAV+V+ +VYY LWVI+ PF+D + +FFP R+YAIAIP+++LVVF+ + + FIGL M+++ Sbjct: 5 SDQRSGAILLAVSVVSYVYYFLWVIITPFVDKGHIVQSFFPERYYAIAIPSIILVVFLTICSTFIGLVMIQS 76
BLAST of NO07G03050 vs. NCBI_GenBank
Match: OQR81680.1 (hypothetical protein THRCLA_23314, partial [Thraustotheca clavata]) HSP 1 Score: 75.9 bits (185), Expect = 8.200e-11 Identity = 37/72 (51.39%), Postives = 53/72 (73.61%), Query Frame = 0 Query: 3 SDQLAGAFLLAVAVIVFVYYTLWVIVLPFIDPDVGLHAFFPPRFYAIAIPTVLLVVFVGLVTLFIGLTMLRA 75 SDQ GA +LA++V F YYTLWV++ PF+D D + +FFP R YAIAIP +L V+F+ + + FIGL M+++ Sbjct: 7 SDQTVGAIVLAISVPTFAYYTLWVLITPFVDKDHVVQSFFPDRHYAIAIPAILFVIFLTICSTFIGLVMIKS 78
BLAST of NO07G03050 vs. NCBI_GenBank
Match: KFH72540.1 (dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit [Mortierella verticillata NRRL 6337]) HSP 1 Score: 73.6 bits (179), Expect = 4.100e-10 Identity = 37/73 (50.68%), Postives = 52/73 (71.23%), Query Frame = 0 Query: 2 GSDQLAGAFLLAVAVIVFVYYTLWVIVLPFIDPDVGLHAFFPPRFYAIAIPTVLLVVFVGLVTLFIGLTMLRA 75 G D++ GA LL + +VFVYYTLW IV+PF+D LHA+FPPR YAI IP VLL+ + +V F+ + M+++ Sbjct: 4 GQDKVVGASLLTFSTVVFVYYTLWAIVMPFVDETYFLHAYFPPREYAIRIPCVLLIFGLTVVLTFLSMIMIKS 76
BLAST of NO07G03050 vs. NCBI_GenBank
Match: GAQ90830.1 (dolichyl-phosphate mannosyltransferase polypeptide 2 regulatory subunit [Klebsormidium nitens]) HSP 1 Score: 73.2 bits (178), Expect = 5.300e-10 Identity = 38/72 (52.78%), Postives = 54/72 (75.00%), Query Frame = 0 Query: 3 SDQLAGAFLLAVAVIVFVYYTLWVIVLPFIDPDVGLHAFFPPRFYAIAIPTVLLVVFVGLVTLFIGLTMLRA 75 +DQLAG LL ++ VFVYYTLWVIVLPF+D D +H++F P+ YAIA+P LV+ + + LF+G+ M+R+ Sbjct: 2 NDQLAGLGLLLFSISVFVYYTLWVIVLPFVDSDHAVHSYFLPQEYAIALPVGALVLLLSFLLLFLGILMVRS 73
BLAST of NO07G03050 vs. NCBI_GenBank
Match: AOW01273.1 (hypothetical protein YALI1_B07538g [Yarrowia lipolytica] >SEI31225.1 YALIA101S01e17898g1_1 [Yarrowia lipolytica]) HSP 1 Score: 73.2 bits (178), Expect = 5.300e-10 Identity = 38/70 (54.29%), Postives = 49/70 (70.00%), Query Frame = 0 Query: 4 DQLAGAFLLAVAVIVFVYYTLWVIVLPFIDPDVGLHAFFPPRFYAIAIPTVLLVVFVGLVTLFIGLTMLR 74 DQL GA +LAVA IVFVYY+ W +LPF+D LH FFPPR +AI IP +LLV+ G+V F+ M++ Sbjct: 3 DQLVGAGMLAVATIVFVYYSSWTFILPFVDESHFLHQFFPPRVWAIRIPVILLVIAFGIVGTFVSSVMIK 72 The following BLAST results are available for this feature:
BLAST of NO07G03050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G03050 ID=NO07G03050|Name=NO07G03050|organism=Nannochloropsis oceanica|type=gene|length=662bpback to top protein sequence of NO07G03050.1 >NO07G03050.1-protein ID=NO07G03050.1-protein|Name=NO07G03050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=101bpback to top Synonyms
Publications
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