NO07G03020, NO07G03020 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO07G03020 vs. NCBI_GenBank
Match: EWM27074.1 (hypothetical protein Naga_100194g5 [Nannochloropsis gaditana]) HSP 1 Score: 164.9 bits (416), Expect = 2.200e-37 Identity = 95/157 (60.51%), Postives = 110/157 (70.06%), Query Frame = 0 Query: 11 PAPVLLFLAVISILIGTSLSEAFIM---PVHSIVAARRRALTSSSIVSMSTSIEEGPSSPAATSTPTGS--SDTGHKADPPCKKYPKCNGAYLGKGCDGAGKIQGGIATFPLLGWWPIKAYRPCPALTEAGYGYKRKGQDFSEFIAGERRTRTEDDE 163 P L LAVIS+L LSEAFI+ P +V RR + SI+ MST E +S + S+ T S SDT K+ PCK +PKC+GAYL +GC G GKIQGGIATFPLLGWWPIKAYRPCP+ TEAGYGYKRKGQDFSEFIAGERR + E +E Sbjct: 44 PMYTLSLLAVISLLASMLLSEAFIVCTKPSPEVVVRRR----THSILFMSTDALEKAASSSTVSSDTSSAESDTVIKSAGPCKNFPKCDGAYLNRGCGGTGKIQGGIATFPLLGWWPIKAYRPCPSATEAGYGYKRKGQDFSEFIAGERRKKPEGEE 196
BLAST of NO07G03020 vs. NCBI_GenBank
Match: XP_021692701.1 (uncharacterized protein LOC110673803 [Hevea brasiliensis]) HSP 1 Score: 95.9 bits (237), Expect = 1.200e-16 Identity = 54/114 (47.37%), Postives = 68/114 (59.65%), Query Frame = 0 Query: 48 LTSSSIVSMSTSIEEGPSSPAATSTPTGS-SDTGHKADPPCKKYPKCNGAYLGKGCDGAGKIQGGIATFPLLGWWPIKAYRPCPALTEAGYGYKRKGQDFSE--FIAGERRTRT 159 L+SSS S+++ E+ P P + P S S T +PP C + KGC+G G+IQGGIATFP GWWPIKAYRPCP +G Y+R+GQ E F GE+RTRT Sbjct: 45 LSSSSPSSLTSVAEDNPLPPPPCARPVQSESATVDSGEPPVGGCKACGRQEIEKGCNGEGRIQGGIATFPGFGWWPIKAYRPCPGFVASGGRYRRQGQSMDEVAFGRGEKRTRT 158
BLAST of NO07G03020 vs. NCBI_GenBank
Match: CEM04168.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 91.7 bits (226), Expect = 2.300e-15 Identity = 35/63 (55.56%), Postives = 44/63 (69.84%), Query Frame = 0 Query: 90 YPKCNGAYLGKGCDGAGKIQGGIATFPLLGWWPIKAYRPCPALTEAGYGYKRKGQDFSEFIAG 153 +P+C+G L +GCDG G+IQGGI PL WWPIK YRPCP+ AGY Y+R GQ + E + G Sbjct: 45 FPRCDGKGLARGCDGQGRIQGGIGAIPLFSWWPIKVYRPCPSFLAAGYQYRRAGQSWDEIVYG 107
BLAST of NO07G03020 vs. NCBI_GenBank
Match: CBJ30785.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 88.2 bits (217), Expect = 2.600e-14 Identity = 43/93 (46.24%), Postives = 56/93 (60.22%), Query Frame = 0 Query: 68 AATSTPTGSSDTGHKADPPCKKYPKCNGAYLGKGCDGAGKIQGGIATFPLLGWWPIKAYRPCPALTEAGYGYKRKGQDFSEFIAGERRTRTED 161 AA + P GSSD C YP+C+G Y +GCDG G+I GG+ L+ W PIKAYRPCP+ TEA Y Y R+GQ +E + R+ +D Sbjct: 50 AAVTAPPGSSDDA------CPGYPRCSGEYRDRGCDGTGRISGGVGA--LVPWLPIKAYRPCPSFTEAKYKYTRQGQSLNEVVFARRQGTMDD 134
BLAST of NO07G03020 vs. NCBI_GenBank
Match: XP_004298921.1 (PREDICTED: uncharacterized protein LOC101295130 [Fragaria vesca subsp. vesca]) HSP 1 Score: 85.9 bits (211), Expect = 1.300e-13 Identity = 37/69 (53.62%), Postives = 43/69 (62.32%), Query Frame = 0 Query: 84 DPPCKKYPKCNGAYLGKGCDGAGKIQGGIATFPLLGWWPIKAYRPCPALTEAGYGYKRKGQDFSEFIAG 153 +PP C + KGC+G G IQGGIATFP GWWPIKAYRPCP E+G Y+R+GQ E G Sbjct: 75 EPPFSACKSCGREEMEKGCNGEGSIQGGIATFPGFGWWPIKAYRPCPGFLESGGRYRRQGQSLDEVAFG 143
BLAST of NO07G03020 vs. NCBI_GenBank
Match: XP_006580516.1 (PREDICTED: uncharacterized protein LOC100810596 isoform X2 [Glycine max]) HSP 1 Score: 85.9 bits (211), Expect = 1.300e-13 Identity = 48/102 (47.06%), Postives = 62/102 (60.78%), Query Frame = 0 Query: 60 IEEGPS-SPAATSTPTGSSD--TGHKADPPCKKYPKCNGAYLGKGCDGAGKIQGGIATFPLLGWWPIKAYRPCPALTEAGYGYKRKGQDFSEFIAGERRTRT 159 IEEGPS SP SS+ +G KA C + +GC+G G+IQGGIAT P LGWWPIKAYRPCPA +G Y+R+GQ E ++G +++T Sbjct: 50 IEEGPSPSPDELPVVVDSSEFTSGCKA---------CGREEIEQGCNGEGRIQGGIATVPGLGWWPIKAYRPCPAFMASGGRYRRQGQSMDEVVSGSGKSKT 142
BLAST of NO07G03020 vs. NCBI_GenBank
Match: XP_014631329.1 (PREDICTED: uncharacterized protein LOC100810596 isoform X1 [Glycine max] >KHM99888.1 hypothetical protein glysoja_017586 [Glycine soja] >KRH60061.1 hypothetical protein GLYMA_05G218000 [Glycine max]) HSP 1 Score: 85.9 bits (211), Expect = 1.300e-13 Identity = 48/102 (47.06%), Postives = 62/102 (60.78%), Query Frame = 0 Query: 60 IEEGPS-SPAATSTPTGSSD--TGHKADPPCKKYPKCNGAYLGKGCDGAGKIQGGIATFPLLGWWPIKAYRPCPALTEAGYGYKRKGQDFSEFIAGERRTRT 159 IEEGPS SP SS+ +G KA C + +GC+G G+IQGGIAT P LGWWPIKAYRPCPA +G Y+R+GQ E ++G +++T Sbjct: 50 IEEGPSPSPDELPVVVDSSEFTSGCKA---------CGREEIEQGCNGEGRIQGGIATVPGLGWWPIKAYRPCPAFMASGGRYRRQGQSMDEVVSGSGKSKT 142
BLAST of NO07G03020 vs. NCBI_GenBank
Match: XP_022640005.1 (uncharacterized protein LOC106768868 isoform X1 [Vigna radiata var. radiata]) HSP 1 Score: 85.9 bits (211), Expect = 1.300e-13 Identity = 36/66 (54.55%), Postives = 45/66 (68.18%), Query Frame = 0 Query: 93 CNGAYLGKGCDGAGKIQGGIATFPLLGWWPIKAYRPCPALTEAGYGYKRKGQDFSEFIAGERRTRT 159 C + KGC+G G+IQGGIAT P GWWPIKAYRPCPA +G Y+R+GQ E ++G +T T Sbjct: 85 CGREEIEKGCNGEGRIQGGIATVPGFGWWPIKAYRPCPAFVASGGRYRRQGQSMDEVVSGSGKTST 150
BLAST of NO07G03020 vs. NCBI_GenBank
Match: XP_014509718.1 (uncharacterized protein LOC106768868 isoform X2 [Vigna radiata var. radiata]) HSP 1 Score: 85.9 bits (211), Expect = 1.300e-13 Identity = 36/66 (54.55%), Postives = 45/66 (68.18%), Query Frame = 0 Query: 93 CNGAYLGKGCDGAGKIQGGIATFPLLGWWPIKAYRPCPALTEAGYGYKRKGQDFSEFIAGERRTRT 159 C + KGC+G G+IQGGIAT P GWWPIKAYRPCPA +G Y+R+GQ E ++G +T T Sbjct: 85 CGREEIEKGCNGEGRIQGGIATVPGFGWWPIKAYRPCPAFVASGGRYRRQGQSMDEVVSGSGKTST 150
BLAST of NO07G03020 vs. NCBI_GenBank
Match: XP_014631331.1 (PREDICTED: uncharacterized protein LOC100810596 isoform X3 [Glycine max]) HSP 1 Score: 85.9 bits (211), Expect = 1.300e-13 Identity = 48/102 (47.06%), Postives = 62/102 (60.78%), Query Frame = 0 Query: 60 IEEGPS-SPAATSTPTGSSD--TGHKADPPCKKYPKCNGAYLGKGCDGAGKIQGGIATFPLLGWWPIKAYRPCPALTEAGYGYKRKGQDFSEFIAGERRTRT 159 IEEGPS SP SS+ +G KA C + +GC+G G+IQGGIAT P LGWWPIKAYRPCPA +G Y+R+GQ E ++G +++T Sbjct: 50 IEEGPSPSPDELPVVVDSSEFTSGCKA---------CGREEIEQGCNGEGRIQGGIATVPGLGWWPIKAYRPCPAFMASGGRYRRQGQSMDEVVSGSGKSKT 142 The following BLAST results are available for this feature:
BLAST of NO07G03020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G03020 ID=NO07G03020|Name=NO07G03020|organism=Nannochloropsis oceanica|type=gene|length=943bpback to top protein sequence of NO07G03020.1 >NO07G03020.1-protein ID=NO07G03020.1-protein|Name=NO07G03020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=163bpback to top Synonyms
Publications
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