NO07G02960, NO07G02960 (gene) Nannochloropsis oceanica

Overview
NameNO07G02960
Unique NameNO07G02960
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1170
Alignment locationchr7:832872..834041 -

Link to JBrowse

Properties
Property NameValue
DescriptionTetrapyrrole methylase family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:832872..834041 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
GO:0008168methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0032259methylation
Vocabulary: INTERPRO
TermDefinition
IPR0359964pyrrol_Methylase_sf
IPR008189rRNA_ssu_MeTfrase_I
IPR0008784pyrrol_Mease
Homology
BLAST of NO07G02960 vs. NCBI_GenBank
Match: EWM27080.1 (tetrapyrrole methylase family protein [Nannochloropsis gaditana])

HSP 1 Score: 449.9 bits (1156), Expect = 8.000e-123
Identity = 245/411 (59.61%), Postives = 304/411 (73.97%), Query Frame = 0
Query:    1 MRIRPTVHFVPILLHLACFSTTAHRQ---LVHTGVGSAASARGLGCFLAPRLLQCLPLL-----------------SSNSRICHSSTRSGAGNSISPSDEGIPGRVPNKIIPGTIYFVATPVGNLGDITLRALDVLRGVDVIASEDTRTTGLLLKALGLTKKPQMSHHQHNVQSRVPELVRKAQVENLSIAVVSDAGTPGISDPGNELAAACWAAGVPVVPVPGACXXXXXXXVSGFASTEFVFIGFLPAKSGKSXXXKVAEVATQDRPCVLYESPNRVLRTLMEIREADETGGERMVMCARELTKLHEELFRGTLSEAVLHFGGQE----GSDSPSTASPRGEFTLVLGPLPRMARGKEEMGALVREMLQVCLDEEELSASEAAKKVSKCLGKEAGLARSDVYKIALEIK 388
            MR +P++ F+ ILL LA   TT       +    + S      L  F++PR  + LP +                 +S SR C SST          ++E +P RVPNKI+PGTIYFV+TP+GNLGDITLRALDVLRGVD+IASEDTRTTGLLLKALGL KKPQ+SHHQHN+QSRVP+L+R+AQ E LSIAVVSDAGTPG+SDPG+ELAAACW AGVP+VPVPGAC       V+GF STEF FIGFLP++SGK    +VA+ A ++RPC+LYESPNR+LRTL E+READETGG R+V+ ARELTKLHE+L+RGTL+EA+ HFGG+E      ++ + A  RGEFTLVLGP PR+AR +EE+   V+ ML+ CL+E+ +SASEAAK  SK LGKEAGLA+SD+YK+A+E+K
Sbjct:   33 MRKKPSLPFLSILLLLAAHCTTTDHVEGCIKVANIASTVRNHRLRAFVSPR--RVLPHVRAVLSRKSYGVGAGAPCTSTSRYCTSST--------DHTEEDMPRRVPNKIMPGTIYFVSTPLGNLGDITLRALDVLRGVDLIASEDTRTTGLLLKALGLGKKPQVSHHQHNIQSRVPDLIRRAQEERLSIAVVSDAGTPGVSDPGSELAAACWTAGVPLVPVPGACAAVAAISVAGFPSTEFTFIGFLPSRSGKVRQAEVAKAAREERPCILYESPNRILRTLTELREADETGGGRLVLVARELTKLHEDLYRGTLTEALAHFGGKEEQGVSVEAGAFAPLRGEFTLVLGPRPRVARSQEEVSIAVQAMLRACLEEDGMSASEAAKAASKTLGKEAGLAKSDMYKLAVEMK 433          
BLAST of NO07G02960 vs. NCBI_GenBank
Match: XP_005855150.1 (tetrapyrrole methylase family protein, partial [Nannochloropsis gaditana CCMP526] >EKU21211.1 tetrapyrrole methylase family protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 306.6 bits (784), Expect = 1.100e-79
Identity = 154/215 (71.63%), Postives = 180/215 (83.72%), Query Frame = 0
Query:   57 SSNSRICHSSTRSGAGNSISPSDEGIPGRVPNKIIPGTIYFVATPVGNLGDITLRALDVLRGVDVIASEDTRTTGLLLKALGLTKKPQMSHHQHNVQSRVPELVRKAQVENLSIAVVSDAGTPGISDPGNELAAACWAAGVPVVPVPGACXXXXXXXVSGFASTEFVFIGFLPAKSGKSXXXKVAEVATQDRPCVLYESPNRVLRTLMEIREADE 272
            +S SR C SST          ++E +P RVPNKI+PGTIYFV+TP+GNLGDITLRALDVLRGVD+IASEDTRTTGLLLKALGL KKPQ+SHHQHN+QSRVP+L+R+AQ E LSIAVVSDAGTPG+SDPG+ELAAACW AGVP+VPVPGAC       V+GF STEF FIGFLP++SGK    +VA+ A ++RPC+LYESPNR+LRTL E+READE
Sbjct:   61 TSTSRYCTSST--------DHTEEDMPRRVPNKIMPGTIYFVSTPLGNLGDITLRALDVLRGVDLIASEDTRTTGLLLKALGLGKKPQVSHHQHNIQSRVPDLIRRAQEERLSIAVVSDAGTPGVSDPGSELAAACWTAGVPLVPVPGACAAVAAISVAGFPSTEFTFIGFLPSRSGKVRQAEVAKAAREERPCILYESPNRILRTLTELREADE 267          
BLAST of NO07G02960 vs. NCBI_GenBank
Match: CBN74644.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 243.0 bits (619), Expect = 1.500e-60
Identity = 161/369 (43.63%), Postives = 205/369 (55.56%), Query Frame = 0
Query:   92 PGTIYFVATPVGNLGDITLRALDVLRGVDVIASEDTRTTGLLLKALGLTKKPQM-SHHQHNVQSRVPELVRKAQVENLSIAVVSDAGTPGISDPGNELAAACWAAGVPVVPVPGACXXXXXXXVSGFASTEFVFIGFLPAKSGKS-XXXKVAEVATQDRPCVLYESPNRVLRTLMEI-----------------------READET--------------GGERM------VMCARELTKLHEELFRGTLSEAVLHFGGQEGSDSPS-------------------------TASPRGEFTLVLGPLPRMARGKEEMGALVREMLQVCLDE---EELSASEAAKKVSKCLGKEAGLARSDVYKIALEIK 388
            PG +YFV+TP+GNL DITLRA+++LR  DVIA+EDTRTTG LLK LG+ +K ++ SHH HN + RVPE+V  A+    S+AVVSDAGTPGISDPG ELAAAC A G+ VVPVPGAC       V+GF S EFVF GF+  K G +    K+AE+A + R C++YESP+R+  TL  +                        E +ET              G E M      V+ ARELTKLHE++FRGTL+EAV  +GG +G  +                              PRGEFT+VLGP        EE  A   E L+  L E     +S S A K VS    K+  L +SDVY++AL ++
Sbjct:  182 PGMVYFVSTPIGNLEDITLRAMNILRTADVIAAEDTRTTGSLLKLLGVERKGRLVSHHDHNTKRRVPEIVEAAR-GGKSVAVVSDAGTPGISDPGMELAAACAAEGLRVVPVPGACAAVAAVSVAGFPSHEFVFFGFVSGKRGSAVRRRKLAEIAQEPRTCIMYESPHRIADTLGGLLKASCPPPSEHVGGRSGTDSGGPHEGNETTASSEAQLAAGRRGGAEGMRFFQWPVVLARELTKLHEDIFRGTLAEAVARYGGGDGVPAREGEGRDGXXXXXXXXXXXXXXXXXXVVRDPRGEFTVVLGPRAAAVGAGEEGQARALEALEARLTELTAGGMSTSSAVKMVS----KDLNLKKSDVYRVALSLR 545          
BLAST of NO07G02960 vs. NCBI_GenBank
Match: XP_005760045.1 (hypothetical protein EMIHUDRAFT_45130, partial [Emiliania huxleyi CCMP1516] >XP_005770169.1 hypothetical protein EMIHUDRAFT_55801, partial [Emiliania huxleyi CCMP1516] >EOD07616.1 hypothetical protein EMIHUDRAFT_45130, partial [Emiliania huxleyi CCMP1516] >EOD17740.1 hypothetical protein EMIHUDRAFT_55801, partial [Emiliania huxleyi CCMP1516])

HSP 1 Score: 221.1 bits (562), Expect = 6.100e-54
Identity = 138/305 (45.25%), Postives = 179/305 (58.69%), Query Frame = 0
Query:   93 GTIYFVATPVGNLGDITLRALDVLRGVDVIASEDTRTTGLLLKALGLTKKPQMSHHQHNVQSRVPELVRKAQVENLSIAVVSDAGTPGISDPGNELAAACWAAGVPVVPVPGACXXXXXXXVSGFASTEFVFIGFLPAKSGKSXXXKVAEVATQDRPCVLYESPNRVLRTLMEIREADETGGERMVMCARELTKLHEELFRGTLSEAVLHFGGQEGSDSPSTASPRGEFTLVLGPLPRMARGKEEMGALVREMLQVCLDEEEL----------SASEAAKKVSKCLGKEAGLARSDVYKIALEIK 388
            GT+Y V TP+GNL D+TLRA   LR VDV+ASEDTR T +LL+ LG + K Q+SHH+HN ++    +V  A+    ++AVVSDAGTPGISDPG  LAA C AAGVP+VPVPGAC       +SGFA+  F F GFLP ++G+     +A +   +R  VLYESP+RV+ TL E+  A +  GER  + ARELTKLHEE  RGT+SE    +   +          RGEFT+VL PL      +EE+ A   E                       S A ++V+  +G   G     VY+IALE+K
Sbjct:    1 GTVYIVGTPIGNLDDLTLRAARTLREVDVVASEDTRRTAVLLRHLGASPKKQLSHHEHNARAASARVVELAR-GGATVAVVSDAGTPGISDPGALLAAECAAAGVPLVPVPGACAAIAALSISGFAAAGFRFGGFLP-RAGRGRREALAALVADERAAVLYESPHRVVATLREL--AAKGAGERRCLAARELTKLHEETARGTVSELAARYAAAQ----DEAGKLRGEFTIVLAPL-----AEEEVAARASEARXXXXXXXXXXXXXXXXXGQPLSRAVREVAAAVGARRGA----VYQIALELK 288          
BLAST of NO07G02960 vs. NCBI_GenBank
Match: WP_099699700.1 (16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Chroococcales cyanobacterium IPPAS B-1203] >PIG95439.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Chroococcales cyanobacterium IPPAS B-1203])

HSP 1 Score: 215.3 bits (547), Expect = 3.300e-52
Identity = 129/296 (43.58%), Postives = 191/296 (64.53%), Query Frame = 0
Query:   93 GTIYFVATPVGNLGDITLRALDVLRGVDVIASEDTRTTGLLLKALGLTKKPQMSHHQHNVQSRVPELVRKAQVENLSIAVVSDAGTPGISDPGNELAAACWAAGVPVVPVPGACXXXXXXXVSGFASTEFVFIGFLPAKSGKSXXXKVAEVATQDRPCVLYESPNRVLRTLMEIREADETGGERMVMCARELTKLHEELFRGTLSEAVLHFGGQEGSDSPSTASPRGEFTLVL-GPLP-RMARGKEEMGALVREMLQVCLDEEELSASEAAKKVSKCLGKEAGLARSDVYKIALEI 387
            GT+Y V TP+GNL D+T RA+ +L+ VD+IA+EDTR TG LL+   +   PQ+S+H+HN  SR+PELV+K   E  +IA+V+DAG PGISDPG EL  AC AA +PVVP+PGA         +G  +  FVF GFLPAK GK    +   +  + R  + YESP+R+ +TL +   A+  G +R ++ ARELTKLHEE +RG +++A+ H+  +E         P+GE+TLV+ G LP ++   K E+ A +++++      + +S S+A+++    L KE  L+RS +Y+IAL +
Sbjct:    7 GTLYLVGTPIGNLEDMTFRAVRILQSVDLIAAEDTRHTGKLLQHFQIA-TPQLSYHEHNRNSRIPELVQKLS-EGKAIALVTDAGMPGISDPGYELVKACIAASIPVVPIPGASAVVTALCAAGLPTDRFVFEGFLPAK-GKERQQRQEALEIESRTMIFYESPHRLRQTLQDF--ANVFGQDRQIVLARELTKLHEEFWRGNIADAIAHYNQRE---------PQGEYTLVVAGVLPSQIHLTKAEIKAELQKIM-----AQGISRSQASRQ----LAKEISLSRSQIYQIALAL 279          
BLAST of NO07G02960 vs. NCBI_GenBank
Match: WP_023076095.1 (16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Leptolyngbya sp. Heron Island J] >ESA32999.1 16s rrna methyltransferase [Leptolyngbya sp. Heron Island J])

HSP 1 Score: 214.5 bits (545), Expect = 5.700e-52
Identity = 127/298 (42.62%), Postives = 183/298 (61.41%), Query Frame = 0
Query:   93 GTIYFVATPVGNLGDITLRALDVLRGVDVIASEDTRTTGLLLKALGLTKKPQMSHHQHNVQSRVPELVRKAQVENLSIAVVSDAGTPGISDPGNELAAACWAAGVPVVPVPGACXXXXXXXVSGFASTEFVFIGFLPAKSGKSXXXKVAEVATQDRPCVLYESPNRVLRTLMEIREADETGGERMVMCARELTKLHEELFRGTLSEAVLHFGGQEGSDSPSTASPRGEFTLVLG---PLPRMARGKEEMGALVREMLQVCLDEEELSASEAAKKVSKCLGKEAGLARSDVYKIALEIK 388
            GT+Y VATP+GNL DIT RA+ +L+  D+IA+EDTR TG LL    + + PQ+S+H+HN QSR+P+L+ K Q+  + IA+VSDAG PGISDPG EL  AC  AG+ V P+PG          S   S  F F GFLP K GK+   ++ ++A + R  VLYESP+R+L+TL +++     GG+R V  ARELTK +EE +RGT+ EA+ HF         +T  PRGEFT+ +    P P+     E +  L        L  + LS S+A+++    L  + G+ + ++Y+++L +K
Sbjct:    5 GTLYLVATPIGNLEDITFRAIRILKEADLIAAEDTRHTGKLLHHFQI-ETPQISYHEHNAQSRIPQLIEKLQMGQI-IALVSDAGMPGISDPGYELVCACAEAGIIVSPIPGPAAVVSAISASALPSDRFTFEGFLPVK-GKARTERLTQLAAESRTMVLYESPHRLLKTLADLQA--HLGGDRRVTVARELTKRYEEFWRGTVDEAIEHF---------TTTEPRGEFTVAIAGHTPSPKTLSNDELLAQLKG------LIAQGLSPSQASRQ----LADQTGVPKREIYQLSLSLK 278          
BLAST of NO07G02960 vs. NCBI_GenBank
Match: WP_026100415.1 (16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Fortiea contorta])

HSP 1 Score: 214.5 bits (545), Expect = 5.700e-52
Identity = 133/297 (44.78%), Postives = 188/297 (63.30%), Query Frame = 0
Query:   92 PGTIYFVATPVGNLGDITLRALDVLRGVDVIASEDTRTTGLLLKALGLTKKPQMSHHQHNVQSRVPELVRKAQVEN-LSIAVVSDAGTPGISDPGNELAAACWAAGVPVVPVPGACXXXXXXXVSGFASTEFVFIGFLPAKSGKSXXXKVAEVATQDRPCVLYESPNRVLRTLMEIREADETGGERMVMCARELTKLHEELFRGTLSEAVLHFGGQEGSDSPSTASPRGEFTLVLGPLPRMARGKEEMGALVREMLQVCLDEEELSASEAAKKVSKCLGKEAGLARSDVYKIALEIK 388
            PGT+Y VATP+GNL DITLRA+ +L+ VD+IA+EDTR TG LL+ L + K PQ+S+H+HN  SR+PEL+  A + N  +IA+VSDAG PGISDPG EL  AC  AG+ VVP+PGA         SG  +  FVF GFLPAK  +    ++  + T+ R  + YESP+R+  TL ++  AD  G +R ++ ARELTKL+EE +RGT++EA+ H+  +E         P+GE+TLVL      A   +E  +L +   ++   ++ +S   +  + S+ L K   L R  VY+IAL I+
Sbjct:    7 PGTLYVVATPIGNLEDITLRAVRILQTVDLIAAEDTRHTGKLLQHLQI-KTPQISYHEHNRHSRIPELL--AHLNNRQAIALVSDAGMPGISDPGYELVGACITAGIRVVPIPGASAAITALSASGLPTDRFVFEGFLPAKE-QRRREQLEFLQTESRTLIFYESPHRLRNTLQDL--ADILGSDRQIVLARELTKLYEEFWRGTIAEAIAHYHQRE---------PQGEYTLVLAG----AASSQEFLSLSQLKTEL---QQLISQGISRSQASRQLAKFTSLPRRQVYQIALAIE 281          
BLAST of NO07G02960 vs. NCBI_GenBank
Match: WP_069073007.1 (16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Nostoc sp. KVJ20] >ODH01706.1 rRNA (cytidine-2'-O-)-methyltransferase [Nostoc sp. KVJ20])

HSP 1 Score: 213.8 bits (543), Expect = 9.700e-52
Identity = 127/297 (42.76%), Postives = 188/297 (63.30%), Query Frame = 0
Query:   92 PGTIYFVATPVGNLGDITLRALDVLRGVDVIASEDTRTTGLLLKALGLTKKPQMSHHQHNVQSRVPELVRKAQVENLSIAVVSDAGTPGISDPGNELAAACWAAGVPVVPVPGACXXXXXXXVSGFASTEFVFIGFLPAKSGKSXXXKVAEVATQDRPCVLYESPNRVLRTLMEIREADETGGERMVMCARELTKLHEELFRGTLSEAVLHFGGQEGSDSPSTASPRGEFTLVLGPLP--RMARGKEEMGALVREMLQVCLDEEELSASEAAKKVSKCLGKEAGLARSDVYKIALEI 387
            PGT+Y V TP+GNL DIT RA+ +L+ VD+IA+EDTR TG LL+   + K PQ+S+H+HN  SR+PEL+    V N +IA+VSDAG PGISDPG EL  AC  AG+PVVP+PGA         +G  +  FVF GFLPAKS +     +  + T+ R  + YESP+R+  TL ++  A   G +R ++  RELTKL+EE +RGT+++A+ H+  +E         P+GE+TLV+  +P  +    +EE+ A +R+++      + +S S+A+++    L K   L R  +Y++AL +
Sbjct:    7 PGTLYVVGTPIGNLEDITFRAVRILQTVDIIAAEDTRHTGKLLQHFQV-KTPQVSYHEHNRTSRIPELLEHL-VNNKAIALVSDAGMPGISDPGYELVKACIEAGIPVVPIPGASAAITALSAAGLPTDRFVFEGFLPAKS-QQRQEHLESLQTESRTLIFYESPHRLRDTLRDL--AIVWGSDRQIVLGRELTKLYEEFWRGTIADAIAHYSQRE---------PQGEYTLVVAGIPASQPQLTEEELKAELRQLI-----SQGISRSQASRQ----LAKFTSLPRRQLYQLALSL 280          
BLAST of NO07G02960 vs. NCBI_GenBank
Match: WP_094330378.1 (MULTISPECIES: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Nostoc] >OYD91319.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Nostoc sp. 'Peltigera membranacea cyanobiont' 213] >AVH65797.1 rRNA small subunit methyltransferase I [Nostoc sp. 'Peltigera membranacea cyanobiont N6'])

HSP 1 Score: 213.8 bits (543), Expect = 9.700e-52
Identity = 126/297 (42.42%), Postives = 188/297 (63.30%), Query Frame = 0
Query:   92 PGTIYFVATPVGNLGDITLRALDVLRGVDVIASEDTRTTGLLLKALGLTKKPQMSHHQHNVQSRVPELVRKAQVENLSIAVVSDAGTPGISDPGNELAAACWAAGVPVVPVPGACXXXXXXXVSGFASTEFVFIGFLPAKSGKSXXXKVAEVATQDRPCVLYESPNRVLRTLMEIREADETGGERMVMCARELTKLHEELFRGTLSEAVLHFGGQEGSDSPSTASPRGEFTLVLGPLP--RMARGKEEMGALVREMLQVCLDEEELSASEAAKKVSKCLGKEAGLARSDVYKIALEI 387
            PGT+Y V TP+GNL DIT RA+ +L+ VD+IA+EDTR TG LL+   + K PQ+S+H+HN  SR+PEL+    + N +IA+VSDAG PGISDPG EL  AC  AG+ VVP+PGA         SG  +  FVF GFLPAK+ +     +  + T+ R  + YESP+R+  TL ++  A+  G +R ++  RELTKL+EE +RGT++EA+ H+  +E         P+GE+TLV+  +P  +    +EE+ A +++++      + +S S+A+++    L K   L R  +Y++AL I
Sbjct:    7 PGTLYVVGTPIGNLEDITFRAVRILQTVDIIAAEDTRHTGKLLQHFQV-KTPQVSYHEHNRTSRIPELLEHL-INNKAIALVSDAGMPGISDPGYELVKACIEAGISVVPIPGASAAITALSASGLPTNRFVFEGFLPAKT-QQRQEHLESLQTESRTLIFYESPHRLRDTLQDL--AEVWGSDRQIVLGRELTKLYEEFWRGTIAEAIAHYSQRE---------PQGEYTLVVAGIPASQPQLTEEELKAELKQLI-----NQGISRSQASRQ----LAKFTSLPRRQLYQLALSI 280          
BLAST of NO07G02960 vs. NCBI_GenBank
Match: WP_094346050.1 (16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Nostoc sp. 'Peltigera membranacea cyanobiont' 232] >OYE00661.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Nostoc sp. 'Peltigera membranacea cyanobiont' 232])

HSP 1 Score: 213.8 bits (543), Expect = 9.700e-52
Identity = 126/297 (42.42%), Postives = 188/297 (63.30%), Query Frame = 0
Query:   92 PGTIYFVATPVGNLGDITLRALDVLRGVDVIASEDTRTTGLLLKALGLTKKPQMSHHQHNVQSRVPELVRKAQVENLSIAVVSDAGTPGISDPGNELAAACWAAGVPVVPVPGACXXXXXXXVSGFASTEFVFIGFLPAKSGKSXXXKVAEVATQDRPCVLYESPNRVLRTLMEIREADETGGERMVMCARELTKLHEELFRGTLSEAVLHFGGQEGSDSPSTASPRGEFTLVLGPLP--RMARGKEEMGALVREMLQVCLDEEELSASEAAKKVSKCLGKEAGLARSDVYKIALEI 387
            PGT+Y V TP+GNL DIT RA+ +L+ VD+IA+EDTR TG LL+   + K PQ+S+H+HN  SR+PEL+    + N +IA+VSDAG PGISDPG EL  AC  AG+ VVP+PGA         SG  +  FVF GFLPAK+ +     +  + T+ R  + YESP+R+  TL ++  A+  G +R ++  RELTKL+EE +RGT++EA+ H+  +E         P+GE+TLV+  +P  +    +EE+ A +++++      + +S S+A+++    L K   L R  +Y++AL I
Sbjct:    7 PGTLYVVGTPIGNLEDITFRAVRILQTVDIIAAEDTRHTGKLLQHFQV-KTPQVSYHEHNRTSRIPELLEHL-INNKAIALVSDAGMPGISDPGYELVKACIEAGISVVPIPGASAAITALSASGLPTNRFVFEGFLPAKT-QQRQEHLESLQTESRTLIFYESPHRLRDTLQDL--AEVWGSDRQIVLGRELTKLYEEFWRGTIAEAIAHYSQRE---------PQGEYTLVVAGIPASQPQLTEEELKAELKQLI-----SQGISRSQASRQ----LAKFTSLPRRQLYQLALSI 280          
The following BLAST results are available for this feature:
BLAST of NO07G02960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27080.18.000e-12359.61tetrapyrrole methylase family protein [Nannochloro... [more]
XP_005855150.11.100e-7971.63tetrapyrrole methylase family protein, partial [Na... [more]
CBN74644.11.500e-6043.63conserved unknown protein [Ectocarpus siliculosus][more]
XP_005760045.16.100e-5445.25hypothetical protein EMIHUDRAFT_45130, partial [Em... [more]
WP_099699700.13.300e-5243.5816S rRNA (cytidine(1402)-2'-O)-methyltransferase [... [more]
WP_023076095.15.700e-5242.6216S rRNA (cytidine(1402)-2'-O)-methyltransferase [... [more]
WP_026100415.15.700e-5244.7816S rRNA (cytidine(1402)-2'-O)-methyltransferase [... [more]
WP_069073007.19.700e-5242.7616S rRNA (cytidine(1402)-2'-O)-methyltransferase [... [more]
WP_094330378.19.700e-5242.42MULTISPECIES: 16S rRNA (cytidine(1402)-2'-O)-methy... [more]
WP_094346050.19.700e-5242.4216S rRNA (cytidine(1402)-2'-O)-methyltransferase [... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL100nonsL100Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR072ncniR072Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000565NSK000565Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G02960.1NO07G02960.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|525389gene_2627Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100194g14gene3470Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G02960.1NO07G02960.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G02960 ID=NO07G02960|Name=NO07G02960|organism=Nannochloropsis oceanica|type=gene|length=1170bp
ATGAGAATACGACCGACCGTCCACTTCGTGCCCATCCTCCTTCACCTTGC
CTGCTTTAGCACGACGGCGCACCGCCAGCTTGTTCATACTGGTGTGGGCT
CTGCCGCCTCCGCCCGCGGTCTGGGCTGCTTCCTTGCACCTCGCCTTCTG
CAATGTTTGCCACTGCTTTCCTCTAACTCGAGAATATGCCACAGCAGTAC
CCGCAGTGGCGCGGGCAACAGCATCAGCCCTAGCGATGAAGGGATACCCG
GGCGAGTTCCCAACAAAATAATTCCCGGTACTATCTACTTTGTCGCCACT
CCTGTGGGCAATCTTGGCGACATCACCCTCCGGGCCCTCGACGTGCTGCG
CGGCGTCGATGTGATCGCCTCAGAAGACACGCGAACAACGGGCTTGCTTC
TCAAGGCTCTTGGATTGACCAAAAAGCCACAAATGAGCCATCATCAACAC
AACGTGCAAAGTCGAGTGCCCGAACTGGTGCGGAAGGCCCAAGTCGAAAA
CCTATCCATTGCCGTGGTCTCAGACGCAGGCACACCTGGTATCTCCGACC
CTGGCAACGAGCTTGCCGCTGCATGTTGGGCCGCAGGGGTCCCTGTCGTG
CCTGTTCCAGGCGCATGCGCGGCAGTTGCCGCTGTGAGCGTCTCTGGATT
TGCATCGACGGAGTTCGTGTTTATTGGCTTCCTCCCTGCGAAGAGTGGAA
AGTCCCGCAAGGCCAAAGTAGCCGAGGTGGCGACCCAAGACCGACCGTGT
GTGCTGTATGAGTCGCCTAACCGCGTGTTGCGCACGTTGATGGAAATTCG
GGAGGCGGATGAGACGGGCGGCGAACGGATGGTGATGTGTGCGCGGGAGC
TGACAAAGTTGCACGAAGAATTGTTTCGAGGTACCTTGAGTGAGGCTGTG
CTTCACTTTGGCGGTCAAGAGGGCAGCGATTCACCCTCAACAGCATCACC
GAGAGGAGAATTTACGTTGGTCTTGGGGCCATTGCCTCGGATGGCGCGGG
GGAAGGAGGAAATGGGTGCCTTGGTGCGAGAAATGCTGCAGGTGTGTCTG
GACGAGGAAGAATTGTCTGCTTCCGAGGCGGCCAAAAAGGTCAGTAAGTG
TCTTGGAAAAGAGGCAGGGCTTGCCAGGTCGGATGTGTACAAAATAGCTC
TTGAAATAAAAGGTAAATAA
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protein sequence of NO07G02960.1

>NO07G02960.1-protein ID=NO07G02960.1-protein|Name=NO07G02960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=390bp
MRIRPTVHFVPILLHLACFSTTAHRQLVHTGVGSAASARGLGCFLAPRLL
QCLPLLSSNSRICHSSTRSGAGNSISPSDEGIPGRVPNKIIPGTIYFVAT
PVGNLGDITLRALDVLRGVDVIASEDTRTTGLLLKALGLTKKPQMSHHQH
NVQSRVPELVRKAQVENLSIAVVSDAGTPGISDPGNELAAACWAAGVPVV
PVPGACAAVAAVSVSGFASTEFVFIGFLPAKSGKSRKAKVAEVATQDRPC
VLYESPNRVLRTLMEIREADETGGERMVMCARELTKLHEELFRGTLSEAV
LHFGGQEGSDSPSTASPRGEFTLVLGPLPRMARGKEEMGALVREMLQVCL
DEEELSASEAAKKVSKCLGKEAGLARSDVYKIALEIKGK*
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Synonyms
Publications