NO07G02950, NO07G02950 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G02950 vs. NCBI_GenBank
Match: EWM27087.1 (alkylated dna repair protein [Nannochloropsis gaditana]) HSP 1 Score: 479.6 bits (1233), Expect = 1.300e-131 Identity = 247/419 (58.95%), Postives = 304/419 (72.55%), Query Frame = 0 Query: 100 QTPAQRVQHALMPEDILSSAIAGLPDLKAAHLSTAVLRLGKGLLQPKEATRRRQLTQDNKAFYTLLDKTLTLVSIPTANLGHIQDFLLGLALLEHPIYDDPTLQARIEMDLYRNLLARRVDELSPGDITGLAWCWEKLGFEPRRLPSALAEVTSTLPFRILIGALKTTTGEEDENKDKEEASLLDLEELRAEVNLKRDTIQLSPDKTIEESRLTAWQGTQPFNYSGKQMPARPMTPRISRIRDRLEILTGVRYDCVLINMYETGKTGMRYHVDPDQGVYWSTNTVVVSIGDTREFCLREIEEKAEEATFSKR-RGGSSMSNTXXXXXXXXXXXXXXXXXXXXXXXXXQNSHHRFFVAQNDVTEMTGECQWRYQHAVRVCDNADDAGPRMSLVYKQSLGQATEEERKWVASYLRQKGGGK 518 +TPAQRVQHAL PEDILS+A+ + LKA HL+TAVLR+GKGLLQPKEATRR+ L ++++ F TLL +TL L+S +A+ HI DFLLGLALL++P+ + + R+E LY+++LA R +ELSPGDI+ L WCW K + RLP EVTS LPFR+LIGAL G E A LLDL LRAE++L+RDTIQLSP KT++ESRLTAWQGTQPF YSGK+MPAR MT R++RIRDRL ++TGV YDCVLIN+YETGK GMRYHVDPDQG+Y+STNTVVVS+GDTREFCLR I E+ EE K RG + + +HHRFFVAQ+D EMT ECQWRYQHAV+VC++A+DAG RMSLV+KQ+L AT++ER W+A+YL K GK Sbjct: 63 ETPAQRVQHALAPEDILSNAVMNMKYLKAGHLATAVLRIGKGLLQPKEATRRKDL-RESQGFQTLLPQTLDLISTTSASTVHILDFLLGLALLDYPLCSEFPTRHRVE-QLYQSILAARANELSPGDISSLVWCWRKFHLDVERLPPHFIEVTSALPFRVLIGALSGGDGA------SESAELLDLAALRAEIDLQRDTIQLSPHKTVDESRLTAWQGTQPFFYSGKEMPAREMTARVARIRDRLAVVTGVYYDCVLINLYETGKVGMRYHVDPDQGIYFSTNTVVVSVGDTREFCLRSIAEEVEEEVGPKGIRGEGEKGSAGADKSHRKSQDRSASAKTVEGRKGKRATHHRFFVAQSDAVEMTRECQWRYQHAVKVCEHAEDAGARMSLVFKQTLDGATQDERYWIATYLSMKDEGK 473
BLAST of NO07G02950 vs. NCBI_GenBank
Match: PNW84499.1 (hypothetical protein CHLRE_03g146087v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 149.8 bits (377), Expect = 2.300e-32 Identity = 96/218 (44.04%), Postives = 112/218 (51.38%), Query Frame = 0 Query: 283 LDLEELRAEVNLKRDTIQLSP-DKTIEESRLTAWQGT--QPFNYSGKQMPARP--MTPRISRIRDRLEILTGVRYDCVLINMYETGKTGMRYHVDPDQGVYWSTNTVVVSIGDTREFCLREIEEKAEEATFSKRRGGSSMSNTXXXXXXXXXXXXXXXXXXXXXXXXXQNSHHRFFVAQNDVTEMTGECQWRYQHAVRVCDNADDAGPRMSLVYKQSL 496 L L++ AEV L RD I L K +EESRLT WQ F YSGK+M P MTP + ++RD L+ LTGV YD VLIN Y GK GMRYHVDP GV WS + VVSIGDTR F REI + NS ++ V DV M G+CQ R QH VRV A+DAGPRMSLV+K+ L Sbjct: 452 LKLQDFMAEVRLNRDVIYLEDGSKAVEESRLTGWQSDIGATFKYSGKEMVPDPSGMTPAVRKVRDELQRLTGVWYDSVLINYYGDGKCGMRYHVDPLYGV-WSPESAVVSIGDTRTFIFREISD--------------------------------------------YNSRWQYRVRNGDVVRMWGDCQDRLQHCVRVERAAEDAGPRMSLVFKERL 624
BLAST of NO07G02950 vs. NCBI_GenBank
Match: GAX19423.1 (hypothetical protein FisN_4Lh404 [Fistulifera solaris]) HSP 1 Score: 142.9 bits (359), Expect = 2.800e-30 Identity = 91/298 (30.54%), Postives = 136/298 (45.64%), Query Frame = 0 Query: 221 ELSPGDITGLAWCWEKLGFEPRR------LPSALAEVTS--TLPFRILIGALKTTTGEEDENKDKEEASLLDLEELRAEVNLKRDTIQLSPDKTIEESRLTAW---QGTQPFNYSGKQMPARPMTPRISRIRDRLEILTGVRYDCVLINMYETGKTGMRYHVDPDQGVYWSTNTVVVSIGDTREFCLREIEEKAEEATFSKRRGGSSMSNTXXXXXXXXXXXXXXXXXXXXXXXXXQNSHHRFFVAQNDVTEMTGECQWRYQHAVRVCDNADDAGPRMSLVYKQS--LGQATEEERKW 506 + P ++GL W ++ + R LP L + LPFRI+ G + + L + +L + VN + D++ S K ++E R TAW +G +PF YSGK MP +P + RIRD L+ +DC L+N+Y GK+ MRYH+DPDQG W +TVVVS+G +R F R ++E+ H F V DVT M G+CQ +QHAV+ D + R S+V+K+S L + ++E +W Sbjct: 91 KFEPHHLSGLFWSFDTYDYVKSRCAGEVVLPLNLKQAYDDLKLPFRIIPGFC-------------DHVTELSVPDLASHVNFRIDSVHTSTQKVVKERRETAWEGDEGVEPFKYSGKSMPRDAFSPTVRRIRDLLDERMDQYFDCCLLNLYPDGKSAMRYHIDPDQGSLWDFDTVVVSVGASRRFSFRRNNSESEKP-------------------------------------------HTFVVMHGDVTFMYGDCQDTFQHAVKKADIKSEQCARASMVFKRSWGLNRKSDETLRW 332
BLAST of NO07G02950 vs. NCBI_GenBank
Match: XP_002186405.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65875.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 139.4 bits (350), Expect = 3.100e-29 Identity = 87/284 (30.63%), Postives = 131/284 (46.13%), Query Frame = 0 Query: 219 VDELSPGDITGLAWCWEKLGFE-----PRRLPSALAEVTSTLPFRILIGALKTTTGEEDENKDKEEASLLDLEELRAEVNLKRDTIQLSPDKTIEESRLTAWQ---GTQPFNYSGKQMPARPMTPRISRIRDRLEILTGVRYDCVLINMYETGKTGMRYHVDPDQGVYWSTNTVVVSIGDTREFCLREIEEKAEEATFSKRRGGSSMSNTXXXXXXXXXXXXXXXXXXXXXXXXXQNSHHRFFVAQNDVTEMTGECQWRYQHAVRVCDNADDAGPRMSLVYKQS 495 V +L P +G+ W ++ L + P L A A++ LPF I+ G L G E L ++ L ++V+ + D I+ + +K + E R TAW+ G PF YSGK MP +P + ++RD ++ T Y+ L+N+Y G +GMRYH+DPDQG W +T VVS+G +R F R + + H F V D+T M GECQ ++QH V+ D+ D PR SLV+K++ Sbjct: 154 VSQLEPHHTSGVKWAFDVLTLQSSAPSPTALDQAYADL--NLPFAIIPGCL---AGLES----------LSVDRLTSQVHFRVDDIRTTSNKVVSERRQTAWEGDTGVAPFTYSGKAMPRSDWSPLVVQVRDVVQARTNQYYNGCLLNLYTDGCSGMRYHIDPDQGTLWDYDTAVVSVGASRRFAFRAMSSSTLQP-------------------------------------------HNFVVMHGDLTYMFGECQSQFQHTVKKADDKTDTTPRASLVFKRT 379
BLAST of NO07G02950 vs. NCBI_GenBank
Match: CBN77996.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 138.3 bits (347), Expect = 6.900e-29 Identity = 84/228 (36.84%), Postives = 114/228 (50.00%), Query Frame = 0 Query: 283 LDLEELRAEVNLKRDTIQLSPDKTIEESRLTAWQGTQ--PFNYSGKQMPARPMTPRISRIRDRLEILTGVRYDCVLINMYETGKTGMRYHVDPDQGVYWSTNTVVVSIGDTREFCLREIEEKAEEATFSKRRGGSSMSNTXXXXXXXXXXXXXXXXXXXXXXXXXQNSHHRFFVAQNDVTEMTGECQWRYQHAVRVCDNADDAGPRMSLVYKQSLGQATEEERKWVAS 509 L +E+ R EV +RD I L K + ESRLTAWQ + PF YSGK M +P + R+RD L TGV YD VL+N+YE+ + MRYH DPD G W+ +T VVS+GDTR+F LR + + H F+++ D MT CQ YQH V+V ++ G R+SLV+KQS+ + E R+ VA+ Sbjct: 279 LRVEDFRDEVAFRRDEILLGGGKVLSESRLTAWQSSDGLPFAYSGKVMEPTSFSPNVLRLRDALYERTGVLYDGVLLNLYESRSSAMRYHSDPDVGTIWTQDTSVVSVGDTRQFALRRTLDHS------------------------------------------PRGRHAFYLSSGDCVRMTDGCQRDYQHCVKVA--KEEVGARISLVFKQSI--SGRERRRGVAA 460
BLAST of NO07G02950 vs. NCBI_GenBank
Match: GAX28406.1 (hypothetical protein FisN_4Hh404 [Fistulifera solaris]) HSP 1 Score: 138.3 bits (347), Expect = 6.900e-29 Identity = 89/287 (31.01%), Postives = 127/287 (44.25%), Query Frame = 0 Query: 221 ELSPGDITGLAWCWEKLGFEPRR------LPSALAEVTS--TLPFRILIGALKTTTGEEDENKDKEEASLLDLEELRAEVNLKRDTIQLSPDKTIEESRLTAW---QGTQPFNYSGKQMPARPMTPRISRIRDRLEILTGVRYDCVLINMYETGKTGMRYHVDPDQGVYWSTNTVVVSIGDTREFCLREIEEKAEEATFSKRRGGSSMSNTXXXXXXXXXXXXXXXXXXXXXXXXXQNSHHRFFVAQNDVTEMTGECQWRYQHAVRVCDNADDAGPRMSLVYKQSLG 497 +L ++GL W +E + R LP L LPFRIL G + L + +L ++VN + D++ S + ++E R TAW +G + F YSGK MP +P + R+RD L+ +DC L+N+Y GK+ MRYH+DPDQG W +TVVVS+G +R F R ++E H F V DVT M G+CQ +QHAV+ D + R SLV+K+S G Sbjct: 174 KLEAHHLSGLLWSFETYDYVKSRCAGEIVLPLNLKRAYDDLKLPFRILPGLC-------------DHVEELSVPDLASQVNFRIDSVYTSSQEIVKERRQTAWEGDEGVESFKYSGKSMPRDAFSPTVKRVRDLLDERMDQYFDCCLLNLYPDGKSAMRYHIDPDQGSLWDFDTVVVSVGASRRFSFRRNNAESERP-------------------------------------------HTFVVMHGDVTHMYGDCQDTFQHAVKKADIKSEQCARASLVFKRSWG 404
BLAST of NO07G02950 vs. NCBI_GenBank
Match: PNH10624.1 (hypothetical protein TSOC_002661 [Tetrabaena socialis]) HSP 1 Score: 134.8 bits (338), Expect = 7.600e-28 Identity = 101/288 (35.07%), Postives = 133/288 (46.18%), Query Frame = 0 Query: 216 ARRVDELSPGDITGLAWCWEKLGFEPRRLPSALAEVTSTLPFRILIGALKTTTGEEDENKDKEEASLLDLEELRAEVNLKRDTIQLSPD-KTIEESRLTAWQGT--QPFNYSGKQM--PARPMTPRISRIRDRLEILT-GVRYDCVLINMYETGKTGMRYHVDPDQGVY--WSTNTVVVSIGDTREFCLREIEEKAEEATFSKRRGGSSMSNTXXXXXXXXXXXXXXXXXXXXXXXXXQNSHHRFFVAQNDVTEMTGECQWRYQHAVRVCDNADDAGPRMSLVYKQSL 496 A V L D+ L W E R L S + +PFR++ A+ L L++ +EV L+RD I L + +EESR+T WQ F YSGK+M A +TP + R+RD L +LT GV+YD VLIN YE GK GMRYH DP +Y W+ +T VVS+GDTR F R I + +S ++ V DV M G+CQ QH VRV +A DAGPR+SLV+K+ L Sbjct: 290 ATEVGTLGQQDLADLVWAVAHFDRE-RSLRS--LQPRMAVPFRVVPQAMPE----------------LRLQDFMSEVELRRDVIYLDDGARAVEESRMTGWQSDIGASFKYSGKEMLPQASGLTPAVRRVRDALTLLTGGVQYDSVLINYYEDGKCGMRYHADP---LYDRWTPDTCVVSLGDTRTFIFRTIAD--------------------------------------------HSSRWQYRVRNGDVVHMYGDCQEVLQHCVRVERHAGDAGPRLSLVFKERL 511
BLAST of NO07G02950 vs. NCBI_GenBank
Match: XP_002949654.1 (hypothetical protein VOLCADRAFT_104423 [Volvox carteri f. nagariensis] >EFJ49206.1 hypothetical protein VOLCADRAFT_104423 [Volvox carteri f. nagariensis]) HSP 1 Score: 132.9 bits (333), Expect = 2.900e-27 Identity = 88/220 (40.00%), Postives = 110/220 (50.00%), Query Frame = 0 Query: 283 LDLEELRAEVNLKRDTIQLSP-DKTIEESRLTAWQGT--QPFNYSGKQMPARP--MTPRISRIRDRLEILTGVRYDCVLINMYETGKTGMRYHVDPDQGVY--WSTNTVVVSIGDTREFCLREIEEKAEEATFSKRRGGSSMSNTXXXXXXXXXXXXXXXXXXXXXXXXXQNSHHRFFVAQNDVTEMTGECQWRYQHAVRVCDNADDAGPRMSLVYKQSL 496 L L + +EV L+RDTI L + +EESR T WQ F YSGK+M +P ++ I ++RDRL LTGV+YD VLIN Y GK GMRYHVDP +Y W+ N+ VVS+GDTR F R I + N+ + V DV M +CQ R QH VRV A DAGPRMSLV+K+ L Sbjct: 583 LRLNDFMSEVELRRDTIYLDDGGRAVEESRRTGWQSEIGATFRYSGKEMQPQPGGLSTHIRQVRDRLWELTGVKYDSVLINYYADGKCGMRYHVDP---LYDRWTPNSAVVSLGDTRAFIFRAIND--------------------------------------------HNTRWHYRVRNGDVVLMFDDCQDRLQHCVRVEKRAADAGPRMSLVFKERL 755
BLAST of NO07G02950 vs. NCBI_GenBank
Match: XP_013898507.1 (DNA repair system specific for alkylated DNA [Monoraphidium neglectum] >KIY99487.1 DNA repair system specific for alkylated DNA [Monoraphidium neglectum]) HSP 1 Score: 130.6 bits (327), Expect = 1.400e-26 Identity = 93/250 (37.20%), Postives = 123/250 (49.20%), Query Frame = 0 Query: 255 LPFRILIGALKTTTGEEDENKDKEEASLLD-LEELRAEVNLKRDTIQLSPD-KTIEESRLTAWQGT--QPFNYSGKQMP--ARPMTPRISRIRDRLEILTGVRYDCVLINMYETGKTGMRYHVDPDQGVYWSTNTVVVSIGDTREFCLREIEEKAEEATFSKRRGGSSMSNTXXXXXXXXXXXXXXXXXXXXXXXXXQNSHHRFFVAQNDVTEMTGECQWRYQHAVRVCDNADDAGPRMSLVYKQSLGQA 499 +PFR+L AL ++ L D LEEL L+RD I L + +EE+RLT WQ F YSGK+M A +TP ++ +RDRL +LTG YD VL+N+YE GK GMRYHVDP W+ NT VVS+G TR+F R+ + A ++ V+ DV EM G+CQ R QH ++V A DAGPR+SLV+KQ + A Sbjct: 235 VPFRVLPCAL-------------QDLRLPDFLEELGPA--LRRDVIYLDGGARAVEEARLTGWQSDIGATFKYSGKEMAPLAGGLTPHVAAVRDRLLLLTGQHYDSVLVNLYEDGKCGMRYHVDPLYDA-WTPNTAVVSLGATRQFVFRDAADHACRWSYP--------------------------------------------VSNGDVVEMFGDCQERLQHCIKVERRARDAGPRISLVFKQRIRHA 424
BLAST of NO07G02950 vs. NCBI_GenBank
Match: XP_001695604.1 (predicted protein [Chlamydomonas reinhardtii]) HSP 1 Score: 129.4 bits (324), Expect = 3.200e-26 Identity = 92/240 (38.33%), Postives = 110/240 (45.83%), Query Frame = 0 Query: 283 LDLEELRAEVNLKRDTIQLSPDKTIEESRLTAWQGTQPFNYSGKQMPARP--MTPRISRIRDRLEILTGVRYDCVLINMYETGKTGMRYHVDPDQGVYWSTNTVVVSIGDTREFCLREIEEKAEEATFSKRRGGSSMSNTXXXXXXXXXXXXXXXXXXXXXXXXXQNSHHRFFVAQNDVTEMTGECQWRYQHAVRVCDNADDAGPRMSLVYKQSLGQATEEERKWVASYLRQKGGGKSGG 521 L L++ AEV L RD I L YSGK+M P MTP + ++RD L+ LTGV YD VLIN Y GK GMRYHVDP GV WS + VVSIGDTR F REI + NS ++ V DV M G+CQ R QH VRV A+DAGPRMSLV+K+ L R YL++ G +GG Sbjct: 338 LKLQDFMAEVRLNRDVIYLEDGS----------------KYSGKEMVPDPSGMTPAVRKVRDELQRLTGVWYDSVLINYYGDGKCGMRYHVDPLYGV-WSPESAVVSIGDTRTFIFREISD--------------------------------------------YNSRWQYRVRNGDVVRMWGDCQDRLQHCVRVERAAEDAGPRMSLVFKERL-------RGPGGEYLQETAGNGTGG 509 The following BLAST results are available for this feature:
BLAST of NO07G02950 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G02950 ID=NO07G02950|Name=NO07G02950|organism=Nannochloropsis oceanica|type=gene|length=2132bpback to top protein sequence of NO07G02950.1 >NO07G02950.1-protein ID=NO07G02950.1-protein|Name=NO07G02950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=521bpback to top Synonyms
Publications
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